ZMYND11

General Information

Gene Name       : ZMYND11
Gene ID             : ENSG00000015171.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZMYND11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZMYND11ENSG00000015171.1912.0112.4112.21ENCSR000AEF
HepG2ZMYND11ENSG00000015171.1929.1132.6630.88ENCSR985KAT
K562ZMYND11ENSG00000015171.196.857.927.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZMYND11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZMYND11 RNA is bound by 18 proteins.  







eCLIP assay for ZMYND11 is not avaliable on ENCORE database.





18 proteins are bound to ZMYND11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10294952295056+3'-UTR,CDS,intron-Proximal3.778323.01428K562UCHL5
chr10300453300520+3'-UTR3.490183.46578HepG2ZC3H11A
chr10300410300495+3'-UTR4.699084.57464K562PUM2
chr10300375300453+3'-UTR3.440416.49939HepG2ZC3H11A
chr10225933226068+5'-UTR,CDS,intron-Proximal3.793479.50935HepG2BCLAF1
chr10181488181579+5'-UTR,intron-Distal,intron-Proximal3.737463.05512HepG2PRPF4
chr10230596230708+intron-Distal3.384073.84025HepG2SUGP2
chr10181535181593+intron-Distal,intron-Proximal3.804645.35442HepG2NKRF
chr10182301182353+intron-Distal3.957253.01456K562EXOSC5
chr10199297199405+intron-Distal4.599877.17881HepG2CSTF2
chr10181529181597+intron-Distal,intron-Proximal3.820374.61345HepG2FAM120A
chr10245166245325+intron-Distal5.0681615.20807HepG2PCBP2
chr10210272210326+intron-Distal4.458603.40087HepG2RBFOX2
chr10267557267637+intron-Distal4.525974.85866HepG2QKI
chr10181740181833+intron-Distal3.888776.48652HepG2CSTF2T
chr10182237182289+intron-Distal4.521415.16513HepG2HNRNPM
chr10181893182055+intron-Distal3.006957.00978HepG2CSTF2T
chr10181850181952+intron-Distal4.856887.15660HepG2HNRNPM
chr10182483182544+intron-Distal3.337123.77567K562NONO
chr10181532181607+intron-Distal,intron-Proximal4.271234.84226K562NONO
chr10182290182385+intron-Distal5.2986710.61007K562NONO
chr10182586182663+intron-Distal4.301934.08332K562NONO
chr10181874181983+intron-Distal4.605006.09831K562HNRNPM
chr10181521181631+intron-Distal,intron-Proximal3.610568.38969HepG2CSTF2T
chr10181668181740+intron-Distal4.799607.60000HepG2CSTF2T
chr10181535181616+intron-Distal,intron-Proximal4.034893.77503K562TIA1
chr10181554181643+intron-Distal,intron-Proximal4.061753.78162K562HNRNPM
chr10257422257532+intron-Distal4.232044.51735HepG2QKI
chr10210198210351+intron-Distal3.345655.50497K562RBFOX2
chr10211348211462+intron-Distal3.587954.51091HepG2HNRNPL
chr10211462211559+intron-Distal3.200503.02891HepG2HNRNPL
chr10206363206419+intron-Distal3.861873.04224HepG2SUGP2
chr10181958182024+intron-Distal3.721623.07287K562TIA1
chr10210199210272+intron-Distal3.419603.87604HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZMYND11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZMYND11 is not available on ENCORE database.

  • 77 RBPs can affect the levels of ZMYND11.  








The Knockdown/knockout RNA-Seq assay for ZMYND11 is not available on ENCORE database.





77 RBPs can affect the gene expression of ZMYND11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZMYND11ENSG00000015171.141244.580701078.885700.206001.907801.38550HepG2ACO1
ZMYND11ENSG00000015171.14678.130601096.39610-0.693105.391004.07100HepG2BCCIP
ZMYND11ENSG00000015171.14771.110901059.38940-0.458202.192401.51690HepG2CNOT7
ZMYND11ENSG00000015171.14485.26550677.34340-0.481103.167202.02030HepG2CSTF2
ZMYND11ENSG00000015171.141337.377501573.41700-0.234502.800902.05460HepG2DAZAP1
ZMYND11ENSG00000015171.141156.78220935.383200.306402.142401.53680HepG2DDX21
ZMYND11ENSG00000015171.14497.55330816.74480-0.715006.117704.15270HepG2DDX28
ZMYND11ENSG00000015171.141996.994901493.996400.418603.328402.65040HepG2DDX3X
ZMYND11ENSG00000015171.141000.281001233.73750-0.302601.828101.33340HepG2EIF2S1
ZMYND11ENSG00000015171.141227.42740883.332100.474505.153603.73450HepG2EIF3G
ZMYND11ENSG00000015171.142296.517201944.833400.239702.921602.30660HepG2ETF1
ZMYND11ENSG00000015171.141356.970501887.81720-0.476303.905903.15620HepG2GPKOW
ZMYND11ENSG00000015171.14638.68450895.07800-0.486902.758701.38940HepG2HNRNPA0
ZMYND11ENSG00000015171.141304.528101654.25220-0.342704.118403.26170HepG2HNRNPF
ZMYND11ENSG00000015171.141055.408101433.25840-0.441507.897406.81220HepG2HNRNPL
ZMYND11ENSG00000015171.141440.050001801.57530-0.323102.286101.70790HepG2HNRNPLL
ZMYND11ENSG00000015171.141280.237901628.98330-0.347602.766202.04210HepG2IGF2BP1
ZMYND11ENSG00000015171.141289.945602120.26710-0.716905.741304.53620HepG2LARP4
ZMYND11ENSG00000015171.14786.724101028.71590-0.386902.905101.66000HepG2LIN28B
ZMYND11ENSG00000015171.14918.395201297.69570-0.498804.744403.70530HepG2MSI2
ZMYND11ENSG00000015171.14612.37020968.04810-0.660703.110102.16640HepG2PABPC1
ZMYND11ENSG00000015171.141423.795001177.714700.273702.696202.15480HepG2PTBP1
ZMYND11ENSG00000015171.141125.806601579.85660-0.488806.306805.30830HepG2PUM2
ZMYND11ENSG00000015171.141565.174001275.586600.295102.672402.05720HepG2QKI
ZMYND11ENSG00000015171.142080.642101093.833500.927507.144506.03920HepG2RAVER1
ZMYND11ENSG00000015171.141899.596301625.521200.224702.121501.65250HepG2RBM22
ZMYND11ENSG00000015171.141639.717601157.641900.502205.926804.97350HepG2RBM25
ZMYND11ENSG00000015171.14714.09170959.37420-0.426002.400401.41360HepG2RCC2
ZMYND11ENSG00000015171.141620.241301310.719500.305703.392502.80600HepG2NELFE
ZMYND11ENSG00000015171.141423.286001220.691700.221401.891101.36840HepG2RECQL
ZMYND11ENSG00000015171.141101.49390822.804300.420702.964302.15370HepG2RRP9
ZMYND11ENSG00000015171.141489.092301226.230900.280102.901502.29890HepG2SF3B4
ZMYND11ENSG00000015171.141191.631501428.06240-0.261103.082402.34730HepG2SLBP
ZMYND11ENSG00000015171.142324.572901279.887800.8608027.9235026.76650HepG2SRSF1
ZMYND11ENSG00000015171.141294.492101625.18880-0.328203.874303.07070HepG2SRSF7
ZMYND11ENSG00000015171.141311.880401041.229500.333204.066503.42210HepG2SRSF9
ZMYND11ENSG00000015171.141478.188101073.140300.461903.756102.98520HepG2SUPV3L1
ZMYND11ENSG00000015171.141505.923701150.324900.388504.588003.89400HepG2TAF15
ZMYND11ENSG00000015171.14511.03990982.83020-0.943507.285405.60430HepG2UPF2
ZMYND11ENSG00000015171.141628.189201298.901600.325904.469503.73790HepG2UTP3
ZMYND11ENSG00000015171.14747.519901056.38710-0.499003.376502.58040HepG2XRN2
ZMYND11ENSG00000015171.141411.060201145.578100.300603.895403.12200HepG2ZC3H8
ZMYND11ENSG00000015171.14290.65920432.25250-0.572504.511903.81940K562AGGF1
ZMYND11ENSG00000015171.14235.86010449.77200-0.931308.746007.51440K562AKAP8L
ZMYND11ENSG00000015171.14677.82470484.424600.484502.380801.83000K562AQR
ZMYND11ENSG00000015171.14310.41990471.90720-0.604305.296703.98650K562ATP5C1
ZMYND11ENSG00000015171.14314.51650460.09590-0.548803.309802.35440K562BOP1
ZMYND11ENSG00000015171.141175.33960615.335700.9335021.6565020.00050K562DDX47
ZMYND11ENSG00000015171.14397.46240505.37870-0.346502.282601.62000K562EIF2S2
ZMYND11ENSG00000015171.14438.10000157.435101.4764010.641508.64780K562EIF3A
ZMYND11ENSG00000015171.14405.80210269.140400.592304.120903.15910K562EIF3G
ZMYND11ENSG00000015171.14893.81130713.051100.325903.375202.34030K562EIF4G2
ZMYND11ENSG00000015171.14363.71410224.720600.694604.269002.81920K562FKBP4
ZMYND11ENSG00000015171.14361.32760198.817500.861807.433906.50560K562FXR1
ZMYND11ENSG00000015171.14463.26580673.47480-0.539804.194803.26680K562GRSF1
ZMYND11ENSG00000015171.14324.54270231.203400.489102.580501.48360K562HNRNPF
ZMYND11ENSG00000015171.14477.41700335.431000.509104.011902.92800K562HNRNPU
ZMYND11ENSG00000015171.14332.34110477.34260-0.522403.561302.61230K562KIF1C
ZMYND11ENSG00000015171.14291.43520456.91640-0.648804.211702.80260K562MAK16
ZMYND11ENSG00000015171.14319.06370422.76990-0.406002.706701.90660K562MTPAP
ZMYND11ENSG00000015171.14260.84150374.81290-0.523002.241301.46780K562NAA15
ZMYND11ENSG00000015171.14592.03130420.359700.493902.942902.08450K562PCBP3
ZMYND11ENSG00000015171.14505.28940322.438300.648005.743604.59160K562POLR2G
ZMYND11ENSG00000015171.14450.93350641.24890-0.508002.311001.56230K562PPIG
ZMYND11ENSG00000015171.14420.10740245.403900.775505.382804.33310K562PRPF8
ZMYND11ENSG00000015171.141088.88290778.025400.484902.351901.59960K562PUF60
ZMYND11ENSG00000015171.141003.38030827.319600.278302.457201.45660K562PUM1
ZMYND11ENSG00000015171.14231.95770446.09550-0.943508.148707.26550K562PUS1
ZMYND11ENSG00000015171.14228.76910434.61550-0.925809.364308.29690K562RBM15
ZMYND11ENSG00000015171.14481.93610321.121500.585604.107502.74390K562NELFE
ZMYND11ENSG00000015171.14452.53130249.979200.856106.301905.05950K562RPS19
ZMYND11ENSG00000015171.14383.72160231.639300.728104.102902.85530K562RPS3
ZMYND11ENSG00000015171.14430.32990297.020200.534803.312501.71160K562SDAD1
ZMYND11ENSG00000015171.14197.29600348.14500-0.819302.663501.49190K562SF1
ZMYND11ENSG00000015171.14601.49760474.860400.341002.641701.72270K562SRPK2
ZMYND11ENSG00000015171.14583.35230311.971400.9029010.301608.95000K562SRSF1
ZMYND11ENSG00000015171.14281.12290378.42760-0.428802.797401.62440K562SRSF7
ZMYND11ENSG00000015171.14293.94720528.42960-0.846203.780601.85690K562STIP1
ZMYND11ENSG00000015171.14425.11890323.402800.394402.361401.60270K562SYNCRIP
ZMYND11ENSG00000015171.14313.98710223.295700.491702.222301.39210K562TIAL1
ZMYND11ENSG00000015171.14227.25910498.09210-1.1321016.9628015.35190K562UPF1
ZMYND11ENSG00000015171.14701.73300443.183500.662909.375007.91660K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZMYND11 is not available on ENCORE database.





5 RBPs can affect the splicing of ZMYND11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZMYND11ENSG00000015171.14chr10+2671342672962558282559882827772828550.171000.000400.02338includedHepG2SFPQ
SEZMYND11ENSG00000015171.14chr10+267134267296255828255988282777282855-0.267000.000200.01928excludedHepG2HNRNPL
SEZMYND11ENSG00000015171.14chr10+267134267296255828255988282777282855-0.216000.000000.00143excludedHepG2RBM15
SEZMYND11ENSG00000015171.14chr10+2671342672962558282559882827772828550.211000.000000.00001includedHepG2SRSF1
SEZMYND11ENSG00000015171.14chr10+293337293406292705292913294275294548-0.077000.000000.00006excludedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZMYND11 is not avaliable on ENCORE database.