PIGP

General Information

Gene Name       : PIGP
Gene ID             : ENSG00000185808.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PIGP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PIGPENSG00000185808.1322.3718.9920.68ENCSR000AEF
HepG2PIGPENSG00000185808.1311.3122.9217.12ENCSR985KAT
K562PIGPENSG00000185808.1329.4733.6431.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PIGP is not avaliable on ENCORE database.



Proteins bound to RNA
  • PIGP RNA is bound by 3 proteins.  







eCLIP assay for PIGP is not avaliable on ENCORE database.





3 proteins are bound to PIGP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr213844444038444507-5'-UTR,CDS,intron-Distal,intron-Proximal4.133944.72426K562LIN28B
chr213844516638445320-5'-UTR,intron-Distal,intron-Proximal4.074487.95933HepG2NCBP2
chr213843956138439669-CDS,intron-Distal,intron-Proximal3.008434.22960K562SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PIGP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PIGP is not available on ENCORE database.

  • 41 RBPs can affect the levels of PIGP.  








The Knockdown/knockout RNA-Seq assay for PIGP is not available on ENCORE database.





41 RBPs can affect the gene expression of PIGP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PIGPENSG00000185808.9228.43600326.72760-0.516303.302702.56370HepG2AUH
PIGPENSG00000185808.9255.54220172.777500.564502.923002.13250HepG2CALR
PIGPENSG00000185808.9233.00250140.659700.728003.633402.85580HepG2CPSF6
PIGPENSG00000185808.993.15250159.72700-0.777902.263501.38240HepG2DDX59
PIGPENSG00000185808.9223.12560307.65880-0.463501.931001.34920HepG2FXR1
PIGPENSG00000185808.9254.66430152.182100.742703.751803.02890HepG2HNRNPLL
PIGPENSG00000185808.9428.70470307.766300.478002.459501.84040HepG2MAGOH
PIGPENSG00000185808.985.89030158.19490-0.881102.432201.41380HepG2NONO
PIGPENSG00000185808.9158.87470246.75520-0.635203.302702.65980HepG2PUF60
PIGPENSG00000185808.9287.47630189.631600.600103.949203.23800HepG2PUS1
PIGPENSG00000185808.9217.35400288.60650-0.409101.958501.48590HepG2NELFE
PIGPENSG00000185808.9121.92860198.00820-0.699502.731401.93550HepG2RPS2
PIGPENSG00000185808.9126.80990202.11230-0.672502.651001.60070HepG2RPS5
PIGPENSG00000185808.9131.52530215.69350-0.713602.740602.06990HepG2SF3A3
PIGPENSG00000185808.9157.47350222.74170-0.500302.493001.87810HepG2SMN1
PIGPENSG00000185808.9368.43400167.611201.136206.997405.74800HepG2SNRNP70
PIGPENSG00000185808.9346.17940229.269400.594404.442203.77420HepG2SRSF9
PIGPENSG00000185808.9222.93760142.221700.648402.808001.86110HepG2SUPT6H
PIGPENSG00000185808.9273.43640171.535500.672602.933302.24000HepG2SUPV3L1
PIGPENSG00000185808.9407.84980532.43810-0.384601.994501.43810K562AKAP8L
PIGPENSG00000185808.9409.84400582.48320-0.507103.439802.80000K562AQR
PIGPENSG00000185808.9133.79250227.72500-0.767304.085302.41460K562DHX30
PIGPENSG00000185808.9193.45670288.96140-0.578902.737901.83010K562EFTUD2
PIGPENSG00000185808.9189.64700309.42790-0.706303.495402.32120K562EIF3D
PIGPENSG00000185808.9241.89230362.77680-0.584703.960003.01610K562EIF3G
PIGPENSG00000185808.9420.89620308.306300.449002.608901.81220K562EIF4A3
PIGPENSG00000185808.9404.94480261.663700.629903.809102.45680K562FKBP4
PIGPENSG00000185808.9715.98390573.018700.321201.976601.33160K562GRSF1
PIGPENSG00000185808.9395.15860301.231000.391501.929301.41940K562HNRNPC
PIGPENSG00000185808.9545.98680396.585100.461102.706001.49050K562HNRNPK
PIGPENSG00000185808.9549.01390404.899800.439203.378202.39300K562HNRNPU
PIGPENSG00000185808.9629.02750449.683500.484103.367702.49120K562HSPD1
PIGPENSG00000185808.9251.16980371.29890-0.563903.301402.23280K562PCBP2
PIGPENSG00000185808.9502.26640357.243100.491402.717101.89280K562PCBP3
PIGPENSG00000185808.9389.12150274.020500.505802.937902.11140K562POLR2G
PIGPENSG00000185808.9180.92360281.19180-0.636202.959802.18560K562PRPF8
PIGPENSG00000185808.9377.84290514.50990-0.445402.477001.91040K562RBM15
PIGPENSG00000185808.9274.53100388.79320-0.502003.021802.13910K562RBM22
PIGPENSG00000185808.9278.34280397.43050-0.513803.283602.51700K562SRSF1
PIGPENSG00000185808.9481.52770273.689100.815002.802301.36710K562SUPT6H
PIGPENSG00000185808.9281.81410388.00740-0.461302.665801.86390K562TIA1
PIGPENSG00000185808.9273.51220380.69850-0.477002.550901.50990K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PIGP is not available on ENCORE database.





7 RBPs can affect the splicing of PIGP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338444837-0.133000.000300.00782excludedK562SRSF1
SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338445297-0.248000.000000.00025excludedHepG2RBM22
SEPIGPENSG00000185808.9chr21-384418513844192438439561384396803844473338445111-0.236000.003530.05769excludedHepG2U2AF1
SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338444837-0.169000.000180.01013excludedK562FXR1
SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338444837-0.274000.000110.06485excludedHepG2LIN28B
SEPIGPENSG00000185808.9chr21-384418513844192438439561384396803844473338445111-0.089000.004770.07849excludedK562U2AF1
SEPIGPENSG00000185808.9chr21-3844444438444610384418513844192438444733384448370.336000.000090.01063includedHepG2HNRNPL
SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338445297-0.139000.004230.07795excludedHepG2SRSF1
SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338444837-0.162000.000060.00379excludedK562HNRNPU
MXEPIGPENSG00000185808.9chr21-3843956138439680384444443844461038437673384380123844473338444837-0.167000.002090.037432includedHepG2U2AF1
MXEPIGPENSG00000185808.9chr21-3844185138441924384444443844461038437673384380123844473338444837-0.188000.003100.055672includedHepG2SRSF1
MXEPIGPENSG00000185808.9chr21-3843956138439680384444443844461038437673384380123844473338444837-0.120000.001430.025052includedK562SRSF1
MXEPIGPENSG00000185808.9chr21-3844185138441924384444443844461038439561384396803844473338444837-0.122000.000300.018642includedK562FXR1
MXEPIGPENSG00000185808.9chr21-3844185138441924384444443844461038437673384380123844473338444837-0.211000.000160.010852includedK562FXR1
MXEPIGPENSG00000185808.9chr21-3843956138439680384418513844192438437673384380123844444438444610-0.087000.003070.093992includedK562HNRNPU
MXEPIGPENSG00000185808.9chr21-38441851384419243844444438444610384376733843801238444733384448370.339000.000330.016301includedHepG2HNRNPL
MXEPIGPENSG00000185808.9chr21-3843956138439680384418513844192438437673384380123844473338444837-0.225000.000060.004412includedHepG2HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PIGP is not avaliable on ENCORE database.