ATP9A

General Information

Gene Name       : ATP9A
Gene ID             : ENSG00000054793.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATP9A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATP9AENSG00000054793.130.060.110.08ENCSR000AEF
HepG2ATP9AENSG00000054793.1318.7416.5217.63ENCSR985KAT
K562ATP9AENSG00000054793.130.280.270.28ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATP9A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATP9A RNA is bound by 20 proteins.  







eCLIP assay for ATP9A is not avaliable on ENCORE database.





20 proteins are bound to ATP9A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr205021476750214817-3'-UTR,intron-Distal3.186604.03249HepG2FUBP3
chr205021400050214088-3'-UTR,intron-Distal3.976978.57166HepG2FUBP3
chr205021491250214966-3'-UTR,intron-Distal4.587504.70978HepG2IGF2BP1
chr205021743550217488-3'-UTR,intron-Distal4.491455.54796HepG2LIN28B
chr205029269950292759-CDS,intron-Distal,intron-Proximal3.206664.43994HepG2U2AF2
chr205023027150230319-CDS,intron-Distal3.045143.18789HepG2BCLAF1
chr205030727750307346-CDS,intron-Distal,intron-Proximal3.457763.40321HepG2GRWD1
chr205023549150235530-CDS,intron-Distal,intron-Proximal3.843604.68902HepG2PPIG
chr205023034050230433-CDS,intron-Distal,intron-Proximal4.640614.97857HepG2AQR
chr205023016750230232-CDS,intron-Distal,intron-Proximal4.8284619.17857HepG2PRPF8
chr205023555350235634-CDS,intron-Distal,intron-Proximal4.197023.01266HepG2SF3B4
chr205023865050238711-CDS,intron-Distal6.7412830.15620HepG2LIN28B
chr205025589050255947-CDS,intron-Distal4.618724.72880HepG2GRWD1
chr205034644150346518-CDS,intron-Distal,intron-Proximal3.364339.65187HepG2DDX3X
chr205024558650245636-CDS,intron-Distal,intron-Proximal4.122363.12827HepG2U2AF2
chr205024169050241754-CDS,intron-Distal,intron-Proximal3.381146.60804HepG2PRPF8
chr205023523850235308-CDS,intron-Distal3.942155.80295HepG2PPIG
chr205023554750235594-CDS,intron-Distal,intron-Proximal3.723454.41267HepG2PPIG
chr205024172650241776-CDS,intron-Distal,intron-Proximal3.725565.75355HepG2LIN28B
chr205023398750234034-CDS,intron-Distal,intron-Proximal4.295273.59236HepG2AQR
chr205029076350290813-CDS,intron-Distal4.853716.76175HepG2PPIG
chr205022539050225457-intron-Distal3.672225.82614HepG2HNRNPL
chr205023396950234027-intron-Distal,intron-Proximal4.755574.68690HepG2PRPF8
chr205028463050284717-intron-Distal3.743833.06084HepG2HNRNPK
chr205022546250225524-intron-Distal3.572107.94466HepG2HNRNPL
chr205038463850384692-intron-Distal4.615225.03029HepG2NKRF
chr205025224250252345-intron-Distal4.1852410.12649HepG2PTBP1
chr205022777450227843-intron-Distal4.865274.22343HepG2XPO5
chr205025224950252336-intron-Distal3.159013.33633HepG2MATR3
chr205025025250250304-intron-Distal4.984034.74221HepG2PTBP1
chr205023011150230186-intron-Distal,intron-Proximal3.863887.37512HepG2EFTUD2
chr205031017550310247-intron-Distal3.911834.60713HepG2XPO5
chr205025032650250393-intron-Distal4.007305.36899HepG2PTBP1
chr205038476650384813-intron-Distal4.978455.11689HepG2RBM22
chr205031889150318978-intron-Distal4.3181719.73356HepG2HNRNPL
chr205038473850384817-intron-Distal5.1206413.82641HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATP9A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATP9A is not available on ENCORE database.

  • 101 RBPs can affect the levels of ATP9A.  








The Knockdown/knockout RNA-Seq assay for ATP9A is not available on ENCORE database.





101 RBPs can affect the gene expression of ATP9A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATP9AENSG00000054793.92813.523901965.056200.517706.666205.07690HepG2AATF
ATP9AENSG00000054793.91481.995702116.82380-0.514404.828403.61630HepG2ABCF1
ATP9AENSG00000054793.91834.849702248.57090-0.293304.584603.83930HepG2ACO1
ATP9AENSG00000054793.91396.450103942.27400-1.4973031.4706029.92350HepG2AKAP1
ATP9AENSG00000054793.92731.909202259.299800.273903.807602.92030HepG2AKAP8L
ATP9AENSG00000054793.92600.763203261.83800-0.326802.474701.72850HepG2ASCC1
ATP9AENSG00000054793.91347.205901909.80130-0.503506.081504.09460HepG2ATP5C1
ATP9AENSG00000054793.94898.647803209.061000.6101019.2518017.74510HepG2AUH
ATP9AENSG00000054793.9934.131201656.98450-0.826909.198607.44380HepG2BCCIP
ATP9AENSG00000054793.9642.800801188.16600-0.8863012.8782011.71350HepG2BOP1
ATP9AENSG00000054793.92162.699801585.734600.447604.901203.28360HepG2BUD13
ATP9AENSG00000054793.91711.611603098.99100-0.8564013.8531012.27230HepG2CIRBP
ATP9AENSG00000054793.92873.072302248.280000.353707.720406.71560HepG2CKAP4
ATP9AENSG00000054793.91684.240001090.785200.626607.463606.37730HepG2CPSF6
ATP9AENSG00000054793.92380.356201742.951700.449505.173703.69470HepG2CPSF7
ATP9AENSG00000054793.91292.126201925.61970-0.5756010.634608.70320HepG2YBX3
ATP9AENSG00000054793.94543.845402666.816100.7687026.1012024.53750HepG2CELF1
ATP9AENSG00000054793.91821.152502079.69690-0.191502.240101.48420HepG2DDX19B
ATP9AENSG00000054793.91037.949102168.05550-1.0627023.1109021.41240HepG2DDX21
ATP9AENSG00000054793.92009.463801238.672000.697904.172202.98490HepG2DDX59
ATP9AENSG00000054793.91511.804802151.32420-0.5090010.257009.11950HepG2DKC1
ATP9AENSG00000054793.91739.093603118.42050-0.8425012.6064011.39970HepG2EIF2S1
ATP9AENSG00000054793.92104.900703446.06900-0.711208.128007.03610HepG2EIF4A3
ATP9AENSG00000054793.93185.314602137.421300.575505.615904.55840HepG2FIP1L1
ATP9AENSG00000054793.92342.508603477.39990-0.570006.520405.48240HepG2FXR1
ATP9AENSG00000054793.91139.802601533.75840-0.428303.940202.85750HepG2GEMIN5
ATP9AENSG00000054793.92052.031501236.446200.730808.361707.29230HepG2GPKOW
ATP9AENSG00000054793.92161.330403390.80730-0.649705.128903.60800HepG2GRSF1
ATP9AENSG00000054793.92789.570502146.861500.377706.962805.50320HepG2HDGF
ATP9AENSG00000054793.92154.003302635.25280-0.290903.938302.85510HepG2HNRNPA2B1
ATP9AENSG00000054793.91112.757202123.26650-0.9321017.5895015.99430HepG2HNRNPC
ATP9AENSG00000054793.91915.146801575.526900.281503.036202.28710HepG2HNRNPF
ATP9AENSG00000054793.94130.617303266.733500.338403.123002.38240HepG2HNRNPK
ATP9AENSG00000054793.91613.842601179.967400.451703.904903.16930HepG2HNRNPLL
ATP9AENSG00000054793.91828.622401474.555300.310402.631101.70160HepG2HNRNPM
ATP9AENSG00000054793.92964.370702109.225000.4909011.8537010.67270HepG2HNRNPU
ATP9AENSG00000054793.92640.205403471.57700-0.394902.678101.47100HepG2HSPD1
ATP9AENSG00000054793.92285.969103278.62090-0.520305.533604.60900HepG2IGF2BP2
ATP9AENSG00000054793.92561.358902154.495100.249503.125802.35050HepG2ILF2
ATP9AENSG00000054793.92353.334303297.89370-0.486803.569802.41190HepG2KHSRP
ATP9AENSG00000054793.92434.223802055.598800.243803.829302.63190HepG2KIF1C
ATP9AENSG00000054793.91630.933902301.91660-0.497105.325703.63900HepG2LIN28B
ATP9AENSG00000054793.91325.212403478.61600-1.3923031.5213029.50070HepG2MAGOH
ATP9AENSG00000054793.91359.346503498.01050-1.3636027.2708025.46510HepG2MATR3
ATP9AENSG00000054793.92149.497801452.428600.565407.514705.54510HepG2NAA15
ATP9AENSG00000054793.92705.200303086.17030-0.190102.212301.65850HepG2PCBP1
ATP9AENSG00000054793.91416.909401816.50460-0.358405.042004.03080HepG2PRPF4
ATP9AENSG00000054793.92014.330002714.19960-0.430205.011204.23820HepG2PUF60
ATP9AENSG00000054793.93169.220702290.344300.4685011.9841010.85760HepG2PUS1
ATP9AENSG00000054793.96036.105403400.963500.8276026.3894024.74820HepG2QKI
ATP9AENSG00000054793.94292.892902465.289400.8001020.7666018.79590HepG2RBM15
ATP9AENSG00000054793.92626.487803079.50630-0.229602.654602.14460HepG2RBM22
ATP9AENSG00000054793.91490.034002146.32800-0.526504.893103.47640HepG2RCC2
ATP9AENSG00000054793.93091.777003494.85930-0.176801.973801.50010HepG2NELFE
ATP9AENSG00000054793.91348.064801697.50210-0.332503.137602.41660HepG2RPLP0
ATP9AENSG00000054793.91085.311701676.24430-0.627108.925507.89660HepG2RPS19
ATP9AENSG00000054793.92465.496203679.37370-0.577604.643003.60900HepG2RPS3A
ATP9AENSG00000054793.92199.740701243.158100.8232010.089108.72730HepG2RRP9
ATP9AENSG00000054793.93029.160302602.563200.218903.563402.78450HepG2SLBP
ATP9AENSG00000054793.91769.952202190.39980-0.307505.150004.31740HepG2SMN1
ATP9AENSG00000054793.92278.350901299.513000.809904.347203.35880HepG2SNRNP70
ATP9AENSG00000054793.95179.391203478.187100.5743020.3553019.32310HepG2SRFBP1
ATP9AENSG00000054793.91760.038503412.59640-0.9553041.9887040.62570HepG2SRSF1
ATP9AENSG00000054793.94283.503802776.360200.6255022.0676020.78240HepG2SRSF9
ATP9AENSG00000054793.92186.061303019.88640-0.4662010.878909.99200HepG2SSB
ATP9AENSG00000054793.92273.549003047.76950-0.4228010.298009.22700HepG2SUCLG1
ATP9AENSG00000054793.93763.364901621.799301.2143022.6647021.06630HepG2SUPV3L1
ATP9AENSG00000054793.91703.513801150.218900.566506.457105.41150HepG2TARDBP
ATP9AENSG00000054793.91390.716801087.027100.355302.378301.44790HepG2TFIP11
ATP9AENSG00000054793.91712.076802067.83930-0.272402.875102.30350HepG2TRIM56
ATP9AENSG00000054793.93354.910302651.712900.339203.899202.84020HepG2TUFM
ATP9AENSG00000054793.91490.372201828.26790-0.294802.084701.53150HepG2U2AF1
ATP9AENSG00000054793.93705.621002806.832400.400703.407602.47810HepG2UBE2L3
ATP9AENSG00000054793.91241.76800958.037700.374102.633301.89430HepG2UCHL5
ATP9AENSG00000054793.92719.112302056.591500.402808.480107.36820HepG2UPF1
ATP9AENSG00000054793.9796.905801485.03660-0.898008.208906.43300HepG2UPF2
ATP9AENSG00000054793.92487.047702113.861800.234502.676201.64340HepG2UTP18
ATP9AENSG00000054793.91304.692501985.55290-0.6058013.9731012.78470HepG2UTP3
ATP9AENSG00000054793.91128.956701596.48390-0.499904.452603.54040HepG2XRN2
ATP9AENSG00000054793.92210.367801792.636900.302105.085304.22210HepG2ZC3H8
ATP9AENSG00000054793.94304.386702261.852000.9282057.2300055.57670HepG2ZNF622
ATP9AENSG00000054793.979.0933023.832301.730504.084802.57300K562ABCF1
ATP9AENSG00000054793.929.236207.292202.003202.845101.87170K562BCLAF1
ATP9AENSG00000054793.933.5534010.142601.725902.523401.69200K562BOP1
ATP9AENSG00000054793.952.1759014.858901.812003.713702.44930K562CNOT7
ATP9AENSG00000054793.967.1064014.978102.163504.693503.22430K562CPEB4
ATP9AENSG00000054793.963.6448029.319201.118102.326401.43300K562CELF1
ATP9AENSG00000054793.941.9327015.533401.432602.374001.76300K562DDX47
ATP9AENSG00000054793.946.020808.695302.403905.204703.93180K562EFTUD2
ATP9AENSG00000054793.962.3479023.843501.386603.305002.28060K562EIF4G2
ATP9AENSG00000054793.968.9539010.975102.651308.161106.64460K562FMR1
ATP9AENSG00000054793.934.329109.304301.883403.038002.07560K562FTO
ATP9AENSG00000054793.924.033606.531601.879402.204301.65270K562FXR1
ATP9AENSG00000054793.942.1079010.292502.032402.869002.05990K562GPKOW
ATP9AENSG00000054793.932.909009.353001.814902.770101.53390K562HNRNPK
ATP9AENSG00000054793.932.880608.793401.902602.628501.72090K562KRR1
ATP9AENSG00000054793.927.860407.455601.901702.661301.30550K562LARP7
ATP9AENSG00000054793.959.1142010.047402.556607.119405.67930K562METAP2
ATP9AENSG00000054793.972.4828025.414501.511904.119502.74050K562MSI2
ATP9AENSG00000054793.972.148108.757103.0423010.807608.80160K562PCBP2
ATP9AENSG00000054793.974.1599024.500001.597804.620502.82190K562PNPT1
ATP9AENSG00000054793.931.891109.563301.737502.431901.80280K562PTBP1
ATP9AENSG00000054793.967.1910026.014801.368803.404802.49860K562PUF60
ATP9AENSG00000054793.9123.905209.168103.7564024.7235021.99300K562RBM22
ATP9AENSG00000054793.934.115108.620201.984503.097502.23190K562RPS19
ATP9AENSG00000054793.990.4017026.084801.793007.532806.23880K562SF3A3
ATP9AENSG00000054793.9164.160509.795304.0668026.6206023.57230K562SF3B1
ATP9AENSG00000054793.928.280906.478202.126103.461602.50110K562SF3B4
ATP9AENSG00000054793.933.552808.194802.033603.191202.09730K562SUPV3L1
ATP9AENSG00000054793.954.611006.038003.176909.199207.02890K562U2AF1
ATP9AENSG00000054793.964.408806.237703.3681012.2781010.56980K562U2AF2
ATP9AENSG00000054793.943.663408.672002.331904.784603.40510K562UCHL5
ATP9AENSG00000054793.995.3632021.642002.139508.466006.46560K562UTP3
ATP9AENSG00000054793.966.5294027.884101.254502.591401.34730K562WRN
ATP9AENSG00000054793.932.897108.828801.897603.033601.74700K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATP9A is not available on ENCORE database.





1 RBPs can affect the splicing of ATP9A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATP9AENSG00000054793.9chr20-502266395022670450225056502251655023021550230371-0.146000.001500.02887excludedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATP9A is not avaliable on ENCORE database.