ATP5L

General Information

Gene Name       : ATP5L
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATP5L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATP5L is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATP5L RNA is bound by 16 proteins.  







eCLIP assay for ATP5L is not avaliable on ENCORE database.





16 proteins are bound to ATP5L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11118279761118279836+3'-UTR,CDS,intron-Distal4.2559761.70673K562PABPC4
chr11118279850118279898+3'-UTR,intron-Distal5.3350627.44389K562LIN28B
chr11118279849118279900+3'-UTR,intron-Distal4.5716019.02716HepG2FUBP3
chr11118279774118279822+3'-UTR,CDS,intron-Distal3.9908120.78339K562LIN28B
chr11118279848118279905+3'-UTR,intron-Distal9.55555138.46008HepG2SUB1
chr11118279720118279817+3'-UTR,CDS,intron-Distal3.8364414.28657K562NOLC1
chr11118279849118279899+3'-UTR,intron-Distal4.4752714.48154HepG2LARP4
chr11118279770118279816+3'-UTR,CDS,intron-Distal6.5138077.28592HepG2SUB1
chr11118279734118279831+3'-UTR,CDS,intron-Distal3.0079910.46417K562DDX6
chr11118279850118279897+3'-UTR,intron-Distal3.2370712.24736K562LARP4
chr11118279750118279835+3'-UTR,CDS,intron-Distal3.622338.98957K562LARP4
chr11118279724118279838+3'-UTR,CDS,intron-Distal3.5662915.62956HepG2LARP4
chr11118280315118280350+3'-UTR,intron-Distal4.018217.64164K562YBX3
chr11118279850118279897+3'-UTR,intron-Distal4.2570131.86350K562PABPC4
chr11118279846118279892+3'-UTR,intron-Distal3.7206410.16157K562NOLC1
chr11118279757118279819+3'-UTR,CDS,intron-Distal3.491586.04393K562ZC3H11A
chr11118279730118279844+3'-UTR,CDS,intron-Distal3.083159.40925K562APOBEC3C
chr11118279847118279897+3'-UTR,intron-Distal3.3982610.14081K562APOBEC3C
chr11118279845118279895+3'-UTR,intron-Distal3.950356.67285K562ZC3H11A
chr11118279848118279893+3'-UTR,intron-Distal3.105403.70435HepG2LIN28B
chr11118272325118272364+5'-UTR3.7508432.82606K562DDX3X
chr11118272312118272384+5'-UTR,CDS5.978244.57565HepG2DDX3X
chr11118272346118272383+5'-UTR,CDS3.3775320.52852K562YBX3
chr11118272374118272435+5'-UTR,CDS,intron-Proximal3.7642629.53573K562GEMIN5
chr11118272320118272329+5'-UTR3.286406.64273K562YBX3
chr11118272379118272389+5'-UTR,CDS3.3927525.01868K562DDX3X
chr11118272358118272434+5'-UTR,CDS,intron-Proximal4.5910510.55421K562DROSHA
chr11118272342118272373+5'-UTR3.983699.66140HepG2SUB1
chr11118272329118272346+5'-UTR4.4572917.36046K562YBX3
chr11118272330118272374+5'-UTR4.7541911.63111K562GEMIN5
chr11118272337118272387+5'-UTR,CDS3.380515.00851HepG2LARP4
chr11118272333118272385+5'-UTR,CDS3.5859110.39995K562PABPC4
chr11118272364118272379+5'-UTR3.6292035.42869K562DDX3X
chr11118279728118279774+CDS,intron-Distal4.4136822.40261K562LIN28B
chr11118277650118277667+CDS,intron-Proximal3.169907.77170HepG2LARP4
chr11118272399118272432+CDS3.4682318.17591HepG2SUB1
chr11118272426118272479+CDS,intron-Proximal3.649866.06472K562AQR
chr11118272400118272422+CDS3.006844.15751K562EIF3G
chr11118272389118272433+CDS,intron-Proximal3.3934284.88131K562DDX3X
chr11118277651118277720+CDS,intron-Proximal4.1196149.95979HepG2SUB1
chr11118277649118277676+CDS,intron-Proximal3.4065214.40716K562GEMIN5
chr11118272408118272485+CDS,intron-Proximal3.275006.08629HepG2PRPF8
chr11118272384118272433+CDS,intron-Proximal4.108606.67587HepG2DDX3X
chr11118279730118279770+CDS,intron-Distal7.1113554.66329HepG2SUB1
chr11118277651118277678+CDS,intron-Proximal3.342036.05482K562DROSHA
chr11118272422118272433+CDS,intron-Proximal3.366924.70509K562EIF3G
chr11118277667118277728+CDS,intron-Proximal3.5360210.28191HepG2LARP4
chr11118272385118272434+CDS,intron-Proximal3.2831643.01421K562PABPC4
chr11118277773118277845+CDS,intron-Distal,intron-Proximal4.800773.70131HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATP5L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATP5L is not available on ENCORE database.

  • 68 RBPs can affect the levels of ATP5L.  








The Knockdown/knockout RNA-Seq assay for ATP5L is not available on ENCORE database.





68 RBPs can affect the gene expression of ATP5L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATP5LENSG00000167283.31057.664801453.15840-0.458307.208506.03610HepG2AKAP8L
ATP5LENSG00000167283.31655.236601446.045200.194802.155001.55730HepG2CKAP4
ATP5LENSG00000167283.31054.162201434.27400-0.444202.916602.21310HepG2CPSF6
ATP5LENSG00000167283.32044.415602662.18470-0.380902.719202.10710HepG2DDX6
ATP5LENSG00000167283.31813.370902559.43510-0.497204.740803.97570HepG2EIF2S1
ATP5LENSG00000167283.31986.476202828.57930-0.509904.372403.57260HepG2EIF4A3
ATP5LENSG00000167283.32160.612802753.82290-0.350001.890901.31490HepG2EIF4B
ATP5LENSG00000167283.31373.644801744.95350-0.345203.065801.91960HepG2ESF1
ATP5LENSG00000167283.31701.709001413.353500.267802.145401.41050HepG2EWSR1
ATP5LENSG00000167283.32042.987002810.23740-0.460004.411903.27590HepG2G3BP2
ATP5LENSG00000167283.31237.200201625.93160-0.394202.707502.07270HepG2GPKOW
ATP5LENSG00000167283.31826.010101486.482600.296702.308101.71350HepG2HNRNPA1
ATP5LENSG00000167283.32562.500002222.538000.205202.457301.56920HepG2HNRNPA2B1
ATP5LENSG00000167283.31880.802002690.98340-0.516805.070404.18070HepG2IGF2BP2
ATP5LENSG00000167283.31873.391202706.56070-0.530804.015502.78890HepG2KHSRP
ATP5LENSG00000167283.31898.642902854.60200-0.588306.457905.46630HepG2MAGOH
ATP5LENSG00000167283.31945.839502870.62940-0.561005.299904.45160HepG2MATR3
ATP5LENSG00000167283.32335.596402938.29000-0.331202.313701.73240HepG2NCBP2
ATP5LENSG00000167283.31524.557602616.92770-0.7795010.331608.95780HepG2PABPC4
ATP5LENSG00000167283.31657.485202571.45110-0.6336016.9490015.65320HepG2PCBP1
ATP5LENSG00000167283.31234.289001464.94240-0.247202.159401.50030HepG2PPIL4
ATP5LENSG00000167283.31720.316202616.54650-0.6050014.9244013.85080HepG2PTBP1
ATP5LENSG00000167283.31687.739302833.78680-0.7476017.9505016.55400HepG2QKI
ATP5LENSG00000167283.32177.631301536.467100.503002.542601.86620HepG2RAVER1
ATP5LENSG00000167283.33107.084002190.275100.5043010.045509.19680HepG2RBM22
ATP5LENSG00000167283.31639.188002571.84280-0.6498011.092609.80160HepG2RBM25
ATP5LENSG00000167283.31863.946902911.96600-0.6436017.5662016.42860HepG2NELFE
ATP5LENSG00000167283.31609.069302712.09890-0.7532023.4785021.98990HepG2RECQL
ATP5LENSG00000167283.31015.222001505.50300-0.568504.054303.08450HepG2RPS3A
ATP5LENSG00000167283.3776.897201034.79180-0.413503.047402.05900HepG2SERBP1
ATP5LENSG00000167283.32157.679202724.16460-0.336305.522304.73600HepG2SF3B4
ATP5LENSG00000167283.32850.978502473.837000.204602.917202.40690HepG2SRFBP1
ATP5LENSG00000167283.31529.673902260.22390-0.5632012.5741011.37170HepG2SRSF5
ATP5LENSG00000167283.31466.056102313.28700-0.6580018.5790017.38070HepG2SRSF9
ATP5LENSG00000167283.32165.561602570.44330-0.247303.616202.92300HepG2SUCLG1
ATP5LENSG00000167283.31833.701502555.79010-0.479008.592607.69400HepG2TAF15
ATP5LENSG00000167283.31555.818202348.42530-0.594009.767008.21530HepG2TIA1
ATP5LENSG00000167283.31342.518601596.18380-0.249702.094601.64730HepG2TIAL1
ATP5LENSG00000167283.31353.97780908.579100.575405.640704.54870HepG2UCHL5
ATP5LENSG00000167283.31721.497001263.801000.445807.583706.67210HepG2UTP3
ATP5LENSG00000167283.31984.896001514.037100.390603.147302.37560HepG2XRN2
ATP5LENSG00000167283.31727.351401439.663000.262703.761103.14960HepG2ZNF622
ATP5LENSG00000167283.31092.537601535.67650-0.491203.186901.78660HepG2ZRANB2
ATP5LENSG00000167283.33215.296503943.42680-0.294502.793601.60750K562AARS
ATP5LENSG00000167283.37993.372904809.271200.7329032.2958030.44320K562AGGF1
ATP5LENSG00000167283.36982.641105284.551300.401904.819603.43390K562AKAP8
ATP5LENSG00000167283.38212.603605004.237400.714604.654103.80030K562AKAP8L
ATP5LENSG00000167283.36378.069005250.598200.280503.875602.77860K562ATP5C1
ATP5LENSG00000167283.32841.993103542.81190-0.318004.226502.88420K562CSTF2
ATP5LENSG00000167283.34164.537305186.66490-0.316705.827104.93260K562DDX47
ATP5LENSG00000167283.36580.742605385.088800.289204.500803.34580K562DKC1
ATP5LENSG00000167283.34037.087203271.153600.303402.875701.55590K562EWSR1
ATP5LENSG00000167283.37611.274404417.422000.7848015.8765013.67880K562FIP1L1
ATP5LENSG00000167283.35343.803804168.400500.358304.220502.41630K562G3BP1
ATP5LENSG00000167283.32436.902303664.71380-0.588705.030504.01220K562G3BP2
ATP5LENSG00000167283.38961.632206570.749700.447606.879905.68020K562GRSF1
ATP5LENSG00000167283.36651.367203633.690800.8721014.0963011.58280K562HNRNPM
ATP5LENSG00000167283.34124.529805610.55510-0.443908.412106.86730K562HNRNPU
ATP5LENSG00000167283.38808.501305988.668200.556608.366306.99450K562HSPD1
ATP5LENSG00000167283.32555.225603266.91230-0.354502.916901.39280K562KHDRBS1
ATP5LENSG00000167283.37533.637605310.842100.504307.795806.23720K562KIF1C
ATP5LENSG00000167283.37124.316905083.705300.486802.841501.74830K562MAK16
ATP5LENSG00000167283.36987.664204170.140100.744608.213106.38030K562NAA15
ATP5LENSG00000167283.38542.120005015.077700.7682014.3671012.02930K562PPIG
ATP5LENSG00000167283.34346.578203391.143200.358003.524202.67720K562PRPF8
ATP5LENSG00000167283.311350.442004963.025701.1934021.9758020.47080K562PUS1
ATP5LENSG00000167283.38372.019104835.559000.7918026.4358024.52250K562RBM15
ATP5LENSG00000167283.34352.709103475.219300.324703.512101.99170K562RBM25
ATP5LENSG00000167283.32656.589803454.48200-0.378902.695301.89060K562RPS19
ATP5LENSG00000167283.33479.832404364.10890-0.326702.886501.86220K562RPS3
ATP5LENSG00000167283.34578.709103467.543100.400902.743301.42160K562RRP9
ATP5LENSG00000167283.36798.183605829.119800.221802.990301.67090K562TROVE2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATP5L is not available on ENCORE database.





3 RBPs can affect the splicing of ATP5L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATP5LENSG00000167283.3chr11+118276371118276424118272324118272432118277459118277691-0.203000.004320.04118excludedK562AQR
SEATP5LENSG00000167283.3chr11+1182763711182764241182746381182747001182776511182778120.280000.003640.05422includedK562HNRNPC
A5SSATP5LENSG00000167283.3chr11+1182763711182765221182763711182764241182776511182778120.298000.000020.00058longerK562AQR
MXEATP5LENSG00000167283.3chr11+1182763711182764241182774591182775491182723241182724321182776511182778120.144000.006330.078651includedK562SRSF1
MXEATP5LENSG00000167283.3chr11+1182763711182764241182776071182776911182723241182724321182797141182799140.151000.010700.066861includedK562AQR
MXEATP5LENSG00000167283.3chr11+1182763711182764241182775491182776911182723241182724321182797141182799140.160000.004310.031761includedK562AQR
MXEATP5LENSG00000167283.3chr11+1182763711182764241182775401182776911182723241182724321182797141182799140.147000.011150.069121includedK562AQR
MXEATP5LENSG00000167283.3chr11+118274579118274700118277459118277549118272324118272432118277651118277812-0.458000.000360.003752includedK562AQR
MXEATP5LENSG00000167283.3chr11+118274579118274700118277377118277549118272324118272432118277651118277812-0.381000.006410.044232includedK562AQR
MXEATP5LENSG00000167283.3chr11+118276338118276424118277459118277549118272324118272432118277651118277812-0.183000.006690.045772includedK562AQR
MXEATP5LENSG00000167283.3chr11+118276371118276424118277459118277549118272324118272432118277651118277812-0.120000.002010.016702includedK562AQR
MXEATP5LENSG00000167283.3chr11+118276371118276522118277459118277549118272324118272432118277651118277812-0.212000.004090.030352includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATP5L is not avaliable on ENCORE database.