FAM136A

General Information

Gene Name       : FAM136A
Gene ID             : ENSG00000035141.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM136A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM136AENSG00000035141.779.1974.0576.62ENCSR000AEF
HepG2FAM136AENSG00000035141.786.29111.3698.83ENCSR985KAT
K562FAM136AENSG00000035141.785.5187.0386.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM136A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM136A RNA is bound by 15 proteins.  







eCLIP assay for FAM136A is not avaliable on ENCORE database.





15 proteins are bound to FAM136A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr27052322970523323-3'-UTR,intron-Distal4.024728.99604K562UPF1
chr27052411070524193-3'-UTR,intron-Distal,intron-Proximal4.3782112.73184K562UPF1
chr27052410270524210-3'-UTR,intron-Distal,intron-Proximal3.124288.73219K562FAM120A
chr27052402670524060-3'-UTR,intron-Distal,intron-Proximal3.947415.48330K562UPF1
chr27052385670523873-3'-UTR,intron-Distal5.7145723.41534K562LIN28B
chr27052379570523856-3'-UTR,intron-Distal7.1118531.13180K562LIN28B
chr27052458170524626-3'-UTR,CDS,intron-Distal3.286894.05586HepG2U2AF2
chr27052400270524060-3'-UTR,intron-Distal,intron-Proximal5.0673118.95443K562LIN28B
chr27052398970524059-3'-UTR,intron-Distal,intron-Proximal4.611153.43975HepG2LIN28B
chr27052410570524244-3'-UTR,intron-Distal,intron-Proximal4.3584013.16898HepG2UPF1
chr27052382770523856-3'-UTR,intron-Distal3.777253.19611HepG2LIN28B
chr27052806270528130-5'-UTR,CDS,intron-Distal,intron-Proximal3.127686.20918K562BUD13
chr27052797170528002-5'-UTR,CDS,intron-Distal,intron-Proximal3.125314.77932K562YBX3
chr27052804570528136-5'-UTR,CDS,intron-Distal,intron-Proximal3.032893.04831K562RBM15
chr27052806570528134-5'-UTR,CDS,intron-Distal,intron-Proximal4.0312824.02382HepG2PRPF8
chr27052794070527996-5'-UTR,CDS,intron-Distal,intron-Proximal4.1423713.02279HepG2PRPF8
chr27052806070528136-5'-UTR,CDS,intron-Distal,intron-Proximal5.3812631.57419K562AQR
chr27052797070528010-5'-UTR,CDS,intron-Distal,intron-Proximal4.134714.82666HepG2DDX3X
chr27052801070528113-5'-UTR,CDS,intron-Distal,intron-Proximal3.176758.87436HepG2DDX3X
chr27052797070528026-5'-UTR,CDS,intron-Distal,intron-Proximal3.047293.72946HepG2PPIG
chr27052792870527986-5'-UTR,CDS,intron-Distal,intron-Proximal3.068494.56647K562PRPF8
chr27052805070528126-5'-UTR,CDS,intron-Distal,intron-Proximal6.1524036.01992HepG2AQR
chr27052907670529192-5'-UTR,CDS,intron-Distal,intron-Proximal3.346846.79253HepG2DDX3X
chr27052801170528110-5'-UTR,CDS,intron-Distal3.697684.06757K562UCHL5
chr27052905670529183-5'-UTR,CDS,intron-Distal,intron-Proximal4.0973112.41221K562DDX3X
chr27052864770528654-CDS,intron-Distal5.5022019.64829HepG2AQR
chr27052901670529054-CDS,intron-Distal4.888895.65342K562AQR
chr27052905570529096-CDS,intron-Distal3.051105.33987HepG2GRWD1
chr27052856870528647-CDS,intron-Distal6.0425741.10395K562AQR
chr27052861670528647-CDS,intron-Distal5.7818025.80190HepG2AQR
chr27052899770529056-CDS,intron-Distal4.407715.94114HepG2BUD13
chr27052853270528598-CDS,intron-Distal,intron-Proximal3.534937.97261K562PRPF8
chr27052859470528654-CDS,intron-Distal4.9138417.61463HepG2PRPF8
chr27052859870528647-CDS,intron-Distal3.527136.73756K562PRPF8
chr27052864770528654-CDS,intron-Distal5.3605922.83458K562AQR
chr27052859670528660-CDS,intron-Distal3.082245.09999HepG2ZNF800
chr27052854170528594-CDS,intron-Distal3.3332410.13937HepG2PRPF8
chr27052868070528736-CDS,intron-Distal,intron-Proximal3.131233.50686HepG2PPIG
chr27052902270529066-CDS,intron-Distal3.838887.09156HepG2PRPF8
chr27052579170525844-intron-Distal4.983373.42734K562PTBP1
chr27052812670528135-intron-Distal,intron-Proximal5.8537414.65613HepG2AQR
chr27052586370525936-intron-Distal5.3026410.27742HepG2PTBP1
chr27052579370525847-intron-Distal5.5295010.55181HepG2PTBP1
chr27052587570525965-intron-Distal4.701423.42734K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM136A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM136A is not available on ENCORE database.

  • 104 RBPs can affect the levels of FAM136A.  








The Knockdown/knockout RNA-Seq assay for FAM136A is not available on ENCORE database.





104 RBPs can affect the gene expression of FAM136A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM136AENSG00000035141.31029.921701549.21820-0.5890012.8134011.70780HepG2ACO1
FAM136AENSG00000035141.32999.800102215.809100.436903.985703.05070HepG2ASCC1
FAM136AENSG00000035141.31786.887902540.50780-0.5077011.211509.98700HepG2AUH
FAM136AENSG00000035141.32675.780801750.252400.612306.342904.89630HepG2BCCIP
FAM136AENSG00000035141.31283.248402037.15650-0.666809.323108.30570HepG2BOP1
FAM136AENSG00000035141.32681.203601964.497500.448605.135504.12440HepG2CALR
FAM136AENSG00000035141.33493.834402105.173500.7308010.634209.20640HepG2CIRBP
FAM136AENSG00000035141.31825.068801548.912300.236603.104802.40910HepG2CKAP4
FAM136AENSG00000035141.3619.481301305.45420-1.075409.681508.28410HepG2CNOT7
FAM136AENSG00000035141.31652.785001394.691200.244902.404601.45900HepG2YBX3
FAM136AENSG00000035141.31962.437402356.02430-0.263702.963602.30240HepG2CELF1
FAM136AENSG00000035141.31781.727701432.819000.314304.833703.77160HepG2DDX19B
FAM136AENSG00000035141.31763.526301396.634300.336403.973802.60460HepG2DDX1
FAM136AENSG00000035141.3993.348001435.61560-0.531304.912504.03520HepG2DDX21
FAM136AENSG00000035141.31880.818801404.337800.421404.715303.51210HepG2DDX24
FAM136AENSG00000035141.32107.182501610.236200.387902.803101.50730HepG2DDX27
FAM136AENSG00000035141.31743.159001303.789200.418903.682302.06830HepG2DDX28
FAM136AENSG00000035141.33430.638902565.301700.419203.642302.93480HepG2DDX3X
FAM136AENSG00000035141.32284.689201736.013900.396103.545202.40610HepG2DDX5
FAM136AENSG00000035141.31617.578602203.68270-0.446103.394702.71830HepG2DDX6
FAM136AENSG00000035141.31854.117801320.862100.489205.330203.99920HepG2DHX30
FAM136AENSG00000035141.31855.850001482.190000.324204.380403.56500HepG2DKC1
FAM136AENSG00000035141.32128.563001513.887800.491504.919603.72210HepG2EEF2
FAM136AENSG00000035141.31733.407701355.358500.354803.470702.27870HepG2EIF3G
FAM136AENSG00000035141.32963.007702499.239800.245503.428802.51230HepG2EIF4G1
FAM136AENSG00000035141.32105.847801687.869200.319102.698501.62000HepG2ESF1
FAM136AENSG00000035141.33982.828802916.916400.4492010.357909.31580HepG2ETF1
FAM136AENSG00000035141.32162.479601513.890300.514306.913105.59800HepG2EWSR1
FAM136AENSG00000035141.31733.471401367.816200.341703.033501.84000HepG2FASTKD2
FAM136AENSG00000035141.31596.894802362.10760-0.564806.017205.02340HepG2FXR1
FAM136AENSG00000035141.31950.535501382.598200.496405.627004.74920HepG2HNRNPA1
FAM136AENSG00000035141.32158.774801537.886900.489205.636704.67440HepG2HNRNPC
FAM136AENSG00000035141.31364.827502218.82560-0.701109.814708.56750HepG2HNRNPK
FAM136AENSG00000035141.31499.068502307.44610-0.6222018.8349017.22560HepG2HNRNPL
FAM136AENSG00000035141.31848.643701560.514200.244303.472502.65820HepG2ILF2
FAM136AENSG00000035141.3896.194301272.55660-0.505802.969301.59070HepG2ILF3
FAM136AENSG00000035141.32236.479801599.121400.483905.303703.61880HepG2LIN28B
FAM136AENSG00000035141.32258.691501793.968200.332202.723501.98010HepG2NSUN2
FAM136AENSG00000035141.31591.505901362.603100.223902.000001.36470HepG2PPIL4
FAM136AENSG00000035141.32486.058501492.617000.7359021.2209019.43220HepG2PRPF4
FAM136AENSG00000035141.32161.323502545.46690-0.236003.601002.94240HepG2PUM1
FAM136AENSG00000035141.32200.614901577.983700.4797010.702609.62790HepG2PUS1
FAM136AENSG00000035141.33181.447002437.987000.383905.959805.27140HepG2RBM22
FAM136AENSG00000035141.31077.269002149.91080-0.9969022.5185020.70700HepG2RBM25
FAM136AENSG00000035141.3985.976301195.81700-0.278401.950001.42640HepG2RPS19
FAM136AENSG00000035141.32174.479201693.760700.360302.943502.11960HepG2RPS2
FAM136AENSG00000035141.31593.493001360.500300.228002.606401.97820HepG2SAFB2
FAM136AENSG00000035141.32175.365301586.571300.4552011.039809.89040HepG2SMN1
FAM136AENSG00000035141.35080.686502228.294201.1890011.045409.49790HepG2SNRNP70
FAM136AENSG00000035141.31878.780902753.58950-0.5515015.1888014.26400HepG2SRFBP1
FAM136AENSG00000035141.34016.941602376.953200.7569029.7261028.54070HepG2SRSF1
FAM136AENSG00000035141.32748.477302367.582200.215102.774002.14700HepG2SRSF5
FAM136AENSG00000035141.31611.336501933.80790-0.263203.394402.79530HepG2SRSF9
FAM136AENSG00000035141.33275.325802390.720300.4541010.702809.82260HepG2SSB
FAM136AENSG00000035141.33096.764402692.538400.201703.102902.45130HepG2SUCLG1
FAM136AENSG00000035141.32665.716501971.915500.434804.582603.68110HepG2TARDBP
FAM136AENSG00000035141.32366.103901570.413500.591302.573801.54150HepG2TBRG4
FAM136AENSG00000035141.31744.802801484.457100.233001.879001.44960HepG2TIAL1
FAM136AENSG00000035141.31925.631002479.74290-0.364902.571701.76470HepG2UBE2L3
FAM136AENSG00000035141.32327.607101568.902800.569004.354403.07730HepG2UPF2
FAM136AENSG00000035141.32519.266001976.780800.349805.369403.95350HepG2UTP18
FAM136AENSG00000035141.32855.438401856.735800.6208017.8293016.50630HepG2UTP3
FAM136AENSG00000035141.32332.399201672.632900.479603.008801.90090HepG2XRCC6
FAM136AENSG00000035141.32591.222901686.377000.619607.744806.54370HepG2XRN2
FAM136AENSG00000035141.31249.839401473.00950-0.237002.685802.02380HepG2ZC3H8
FAM136AENSG00000035141.31827.591502115.10600-0.210802.920702.36310HepG2ZNF622
FAM136AENSG00000035141.32321.509101519.441300.611404.921203.13570HepG2ZRANB2
FAM136AENSG00000035141.32729.790703621.40770-0.407803.329801.97300K562ABCF1
FAM136AENSG00000035141.32318.745601607.130600.5288011.7258010.65170K562AGGF1
FAM136AENSG00000035141.32167.907001766.010800.295702.267701.39000K562AKAP8
FAM136AENSG00000035141.32086.471701672.296500.319102.811602.15300K562AKAP8L
FAM136AENSG00000035141.34256.127003373.932000.335003.470802.07180K562APOBEC3C
FAM136AENSG00000035141.32273.919103213.65980-0.499006.044005.23400K562AQR
FAM136AENSG00000035141.32206.764501754.649600.330604.248503.09110K562ATP5C1
FAM136AENSG00000035141.31492.628802216.18270-0.570206.577605.21810K562BOP1
FAM136AENSG00000035141.32558.590801920.595600.413703.620902.24680K562CCDC124
FAM136AENSG00000035141.31182.837802883.41140-1.2855013.8210011.49720K562CNOT7
FAM136AENSG00000035141.31629.579102356.39740-0.532107.852906.51900K562CPSF6
FAM136AENSG00000035141.35020.708302932.630400.7756024.8346023.07340K562DDX47
FAM136AENSG00000035141.32518.895301799.484300.485109.098107.32070K562DKC1
FAM136AENSG00000035141.31100.163601517.29260-0.463802.491401.62780K562EFTUD2
FAM136AENSG00000035141.31982.375902757.81590-0.476308.817607.64400K562EIF2S2
FAM136AENSG00000035141.31834.67370949.863100.949607.861306.13400K562EIF3A
FAM136AENSG00000035141.32072.239901411.449200.553902.077001.37960K562EIF3G
FAM136AENSG00000035141.3807.718401203.12400-0.574908.055005.59550K562EWSR1
FAM136AENSG00000035141.31771.958502397.65710-0.436304.474903.38480K562FMR1
FAM136AENSG00000035141.31477.728502032.26480-0.459704.068702.94340K562FTO
FAM136AENSG00000035141.32345.749901433.397200.7105017.4907016.08150K562FXR1
FAM136AENSG00000035141.31873.382901455.762600.363802.110901.50500K562G3BP2
FAM136AENSG00000035141.31445.408702249.74710-0.638309.389707.91880K562GPKOW
FAM136AENSG00000035141.31027.519801822.76770-0.8270014.8928013.59300K562HNRNPC
FAM136AENSG00000035141.31901.565202650.17030-0.478906.353904.69210K562HNRNPL
FAM136AENSG00000035141.32397.225801774.709800.433704.440503.36080K562KIF1C
FAM136AENSG00000035141.31474.087401921.08870-0.382102.237801.40770K562KRR1
FAM136AENSG00000035141.32060.716401690.813700.285302.522001.71780K562MAGOH
FAM136AENSG00000035141.32437.970501988.125300.294202.711001.81420K562MBNL1
FAM136AENSG00000035141.31567.523902196.01800-0.486406.057404.73600K562METAP2
FAM136AENSG00000035141.31782.480202153.12710-0.272503.665802.74490K562MTPAP
FAM136AENSG00000035141.31885.132401393.533100.435802.181401.41870K562NAA15
FAM136AENSG00000035141.32038.602202392.22440-0.230803.763302.90850K562NSUN2
FAM136AENSG00000035141.31151.729401745.00530-0.599402.634601.67330K562PABPN1
FAM136AENSG00000035141.31661.707702096.15420-0.335102.344501.57910K562PCBP3
FAM136AENSG00000035141.31333.949401607.80510-0.269402.282801.55540K562POLR2G
FAM136AENSG00000035141.32419.295301642.711500.558408.692007.55690K562PTBP1
FAM136AENSG00000035141.32879.334801658.429200.7958013.0173011.88620K562PUS1
FAM136AENSG00000035141.32530.515401615.914300.6470013.8274012.49610K562RBM15
FAM136AENSG00000035141.32376.165301504.238800.659507.119805.79360K562RPS19
FAM136AENSG00000035141.31875.286901432.645500.388303.921302.62110K562SAFB
FAM136AENSG00000035141.32036.889002360.65360-0.212802.066701.35480K562SF3A3
FAM136AENSG00000035141.32272.359501610.375200.496706.837405.73540K562SRSF1
FAM136AENSG00000035141.3910.344701455.91840-0.6774012.7761010.10500K562SSB
FAM136AENSG00000035141.32556.083601612.693400.6644012.7468010.98980K562SYNCRIP
FAM136AENSG00000035141.31182.316601629.86900-0.463104.309903.42010K562TARDBP
FAM136AENSG00000035141.31874.941801411.943900.409102.929501.79890K562U2AF1
FAM136AENSG00000035141.31730.636601457.956900.247302.139301.43330K562U2AF2
FAM136AENSG00000035141.31042.652901513.28160-0.537402.929401.87600K562UCHL5
FAM136AENSG00000035141.32683.247302105.678000.349603.721901.77830K562UPF2
FAM136AENSG00000035141.31816.669602170.41970-0.256702.128101.36210K562WDR3
FAM136AENSG00000035141.32559.725202257.067400.181402.239401.47110K562WDR43
FAM136AENSG00000035141.32500.155801377.169900.860205.486403.06270K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM136A is not available on ENCORE database.





10 RBPs can affect the splicing of FAM136A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.135000.000010.02292includedHepG2FASTKD2
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.118000.000000.00045includedHepG2PRPF8
SEFAM136AENSG00000035141.3chr2-7052865370528735705279717052811270529056705291880.073000.000010.00131includedHepG2QKI
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.120000.000060.01879includedHepG2UCHL5
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.157000.003280.05889includedK562U2AF1
SEFAM136AENSG00000035141.3chr2-7052865370528735705279717052811270529056705291880.146000.000000.00000includedHepG2SUPV3L1
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.074000.000070.03861includedHepG2BCCIP
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.107000.000040.08995includedHepG2LSM11
SEFAM136AENSG00000035141.3chr2-7052865370528735705279717052811270529056705291880.159000.000020.00146includedK562TARDBP
SEFAM136AENSG00000035141.3chr2-7052853970528735705279717052811270529056705291880.104000.000000.00089includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM136A is not avaliable on ENCORE database.