DEPDC1B

General Information

Gene Name       : DEPDC1B
Gene ID             : ENSG00000035499.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DEPDC1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DEPDC1BENSG00000035499.1229.2828.5328.91ENCSR000AEF
HepG2DEPDC1BENSG00000035499.1227.3747.5337.45ENCSR985KAT
K562DEPDC1BENSG00000035499.1234.3635.7235.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DEPDC1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • DEPDC1B RNA is bound by 21 proteins.  







eCLIP assay for DEPDC1B is not avaliable on ENCORE database.





21 proteins are bound to DEPDC1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr55989315859893224-3'-UTR,intron-Distal3.327845.68175HepG2FUBP3
chr55994057059940592-3'-UTR,CDS,intron-Distal,intron-Proximal4.366356.65960HepG2BCLAF1
chr55994322059943303-3'-UTR,CDS,intron-Distal,intron-Proximal3.5931111.73537HepG2BCLAF1
chr55989922259899303-3'-UTR,CDS,intron-Distal3.404325.40132HepG2BCLAF1
chr55994063359940676-3'-UTR,CDS,intron-Distal3.537596.06436HepG2BCLAF1
chr55989296359893105-3'-UTR,intron-Distal4.5985416.84735HepG2FUBP3
chr55993456959934595-3'-UTR,CDS,intron-Distal,intron-Proximal3.872825.35703HepG2BCLAF1
chr55989362559893724-3'-UTR,CDS,intron-Distal3.414674.94406K562YBX3
chr55989291259893049-3'-UTR,intron-Distal3.558934.43569HepG2ZC3H11A
chr55989323459893311-3'-UTR,intron-Distal4.5368210.46383HepG2FUBP3
chr55989325059893357-3'-UTR,intron-Distal,intron-Proximal3.344204.94579K562ZC3H11A
chr55989320059893350-3'-UTR,intron-Distal3.335928.72722K562PUM2
chr55989921459899318-3'-UTR,CDS,intron-Distal,intron-Proximal4.260668.83457HepG2GRWD1
chr55989930359899373-3'-UTR,CDS,intron-Distal4.153765.79432HepG2BCLAF1
chr55994321759943285-3'-UTR,CDS,intron-Distal,intron-Proximal3.351837.51172HepG2PPIG
chr55994059259940633-3'-UTR,CDS,intron-Distal3.852507.23562HepG2BCLAF1
chr55994057159940645-3'-UTR,CDS,intron-Distal,intron-Proximal4.7588723.68348K562PUM2
chr55993864159938686-3'-UTR,CDS,intron-Distal3.026886.91034HepG2BCLAF1
chr55989917559899259-3'-UTR,CDS,intron-Distal,intron-Proximal4.5443619.28365HepG2PRPF8
chr55994330959943358-3'-UTR,CDS,intron-Distal3.283794.24070HepG2GRWD1
chr55994133459941437-3'-UTR,CDS,intron-Distal,intron-Proximal3.991348.49795HepG2BCLAF1
chr55998278259982868-5'-UTR,CDS,intron-Distal,intron-Proximal3.546535.10069HepG2GRWD1
chr55998293359983045-5'-UTR,CDS,intron-Distal3.1813212.47795K562DDX3X
chr55998304559983055-5'-UTR,CDS,intron-Distal,intron-Proximal4.492725.47892K562DDX3X
chr55999586859995913-5'-UTR,CDS,intron-Distal3.194653.90007HepG2NCBP2
chr55999590959995970-5'-UTR,CDS,intron-Distal,intron-Proximal4.001274.84415HepG2DDX3X
chr55998297959983037-5'-UTR,CDS,intron-Distal3.315476.18332HepG2GRWD1
chr55999587159995974-5'-UTR,CDS,intron-Distal,intron-Proximal6.0841426.75180K562DDX3X
chr55999588959995915-5'-UTR,CDS,intron-Distal3.802117.13692K562ZNF622
chr55999584459995910-5'-UTR,CDS,intron-Distal3.509893.59112HepG2PPIG
chr55999587059995889-5'-UTR,CDS,intron-Distal4.149357.14937K562ZNF622
chr55998278659982872-5'-UTR,CDS,intron-Distal,intron-Proximal3.851888.04012K562ZNF622
chr55999586959995915-5'-UTR,CDS,intron-Distal3.382923.63043HepG2GRWD1
chr55998302959983056-5'-UTR,CDS,intron-Distal,intron-Proximal3.173815.75243K562ZNF622
chr55989496159895036-CDS,intron-Distal3.290024.08171K562YBX3
chr55998003959980066-intron-Distal3.385063.72904K562EXOSC5
chr55997950659979548-intron-Distal5.022876.73640K562EXOSC5
chr55989901559899115-intron-Distal4.264034.79379K562KHSRP
chr55995593459956052-intron-Distal4.081767.93237K562PTBP1
chr55995609059956162-intron-Distal4.399073.55787K562PTBP1
chr55989795059898036-intron-Distal6.1458153.69902HepG2PCBP2
chr55991852759918639-intron-Distal3.482933.51804HepG2HNRNPL
chr55998049659980547-intron-Distal3.548555.85269K562EXOSC5
chr55997531759975360-intron-Distal3.693543.97268K562PTBP1
chr55997307859973141-intron-Distal4.426445.71021K562TARDBP
chr55997694659977044-intron-Distal5.2603918.42033K562EXOSC5
chr55989791559897950-intron-Distal4.8759115.51526HepG2PCBP2
chr55997524659975375-intron-Distal3.203464.26712HepG2PTBP1
chr55995595559956073-intron-Distal4.583627.55717HepG2PTBP1
chr55989606359896109-intron-Distal3.838575.38389HepG2PCBP2
chr55997525059975317-intron-Distal6.0214613.57230K562PTBP1
chr55997710059977215-intron-Distal4.9571311.62920K562HNRNPM
chr55997716059977237-intron-Distal4.206986.41051K562EXOSC5
chr55989605059896118-intron-Distal3.450823.62418K562PTBP1
chr55997902359979091-intron-Distal3.517967.69952K562EXOSC5
chr55992630559926376-intron-Distal3.263104.90436HepG2HLTF
chr55997707959977227-intron-Distal5.444719.40914HepG2HNRNPM
chr55997941259979434-intron-Distal4.304824.48623K562EXOSC5
chr55997726759977316-intron-Distal4.841036.41216K562EXOSC5
chr55998067259980711-intron-Distal4.431025.12361K562EXOSC5
chr55989426159894322-intron-Distal3.410654.21828HepG2TIAL1
chr55990955459909667-intron-Distal3.656623.14791K562HNRNPL
chr55998007159980137-intron-Distal3.254726.26462K562EXOSC5
chr55995231059952394-intron-Distal3.583033.22908HepG2CSTF2
chr55997704459977113-intron-Distal4.8015010.61559K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DEPDC1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DEPDC1B is not available on ENCORE database.

  • 138 RBPs can affect the levels of DEPDC1B.  








The Knockdown/knockout RNA-Seq assay for DEPDC1B is not available on ENCORE database.





138 RBPs can affect the gene expression of DEPDC1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DEPDC1BENSG00000035499.8529.59230809.32900-0.611806.464805.61520HepG2ACO1
DEPDC1BENSG00000035499.8392.29940885.16020-1.1740013.3208012.24530HepG2AKAP1
DEPDC1BENSG00000035499.8423.69470732.41250-0.789607.305906.05970HepG2ASCC1
DEPDC1BENSG00000035499.8797.763601428.31610-0.840309.357008.21720HepG2AUH
DEPDC1BENSG00000035499.8284.64770821.92180-1.5298020.9399018.24620HepG2BCCIP
DEPDC1BENSG00000035499.8383.36030714.18560-0.897608.408906.95360HepG2BCLAF1
DEPDC1BENSG00000035499.8144.58670554.75630-1.9399029.0221027.43370HepG2BOP1
DEPDC1BENSG00000035499.8439.24010847.32140-0.9479013.9619012.45680HepG2CALR
DEPDC1BENSG00000035499.8423.02090695.83690-0.718006.165005.03860HepG2CIRBP
DEPDC1BENSG00000035499.8364.47520809.30230-1.1509015.8842014.56640HepG2CKAP4
DEPDC1BENSG00000035499.8820.78210593.226200.468302.140301.47400HepG2CNOT7
DEPDC1BENSG00000035499.8160.67520509.27850-1.6643021.6414019.95080HepG2CPSF6
DEPDC1BENSG00000035499.8561.15080732.03530-0.383503.318002.20330HepG2YBX3
DEPDC1BENSG00000035499.8671.449601248.65060-0.8950019.7936018.39220HepG2CELF1
DEPDC1BENSG00000035499.8806.773601342.68640-0.7349018.7802017.16700HepG2DAZAP1
DEPDC1BENSG00000035499.8269.92630652.49940-1.2734010.093708.88630HepG2DDX21
DEPDC1BENSG00000035499.8525.71700847.95240-0.689706.041005.15050HepG2DDX3X
DEPDC1BENSG00000035499.8280.67480808.12000-1.5257020.8846019.05580HepG2DDX55
DEPDC1BENSG00000035499.8287.09190578.32910-1.010406.116204.69040HepG2DDX59
DEPDC1BENSG00000035499.8411.10500844.03540-1.037807.717206.11550HepG2DDX5
DEPDC1BENSG00000035499.8222.78360728.32410-1.7089023.7918022.23150HepG2DDX6
DEPDC1BENSG00000035499.8491.15420774.34710-0.656806.117405.18590HepG2DKC1
DEPDC1BENSG00000035499.8426.10690718.86980-0.7545010.225908.94380HepG2DNAJC21
DEPDC1BENSG00000035499.8272.04760712.42600-1.3889026.1211024.31260HepG2DNAJC2
DEPDC1BENSG00000035499.8391.93690588.87190-0.587303.495302.24160HepG2EFTUD2
DEPDC1BENSG00000035499.8381.96860600.44100-0.652603.483502.23220HepG2AGO1
DEPDC1BENSG00000035499.8141.65150700.23960-2.3055040.4761038.40870HepG2EIF2S1
DEPDC1BENSG00000035499.8379.41680573.39130-0.595703.903802.84030HepG2EIF3D
DEPDC1BENSG00000035499.8334.75350773.88760-1.2090014.4062012.96960HepG2EIF4A3
DEPDC1BENSG00000035499.8562.57900753.41080-0.421401.955901.37050HepG2EIF4B
DEPDC1BENSG00000035499.81032.828801324.57320-0.358904.587803.55090HepG2EIF4G1
DEPDC1BENSG00000035499.8763.499701268.86880-0.732809.279407.82460HepG2EIF4G2
DEPDC1BENSG00000035499.8992.082601639.76420-0.725007.688006.77100HepG2ETF1
DEPDC1BENSG00000035499.8553.91590790.99150-0.514004.175303.14920HepG2EWSR1
DEPDC1BENSG00000035499.8368.30280621.55030-0.755005.641404.10030HepG2FASTKD2
DEPDC1BENSG00000035499.8646.75640909.40160-0.491702.930602.13820HepG2FIP1L1
DEPDC1BENSG00000035499.8479.61990672.63920-0.487902.883501.58620HepG2FKBP4
DEPDC1BENSG00000035499.8259.98190510.18880-0.972603.945202.72950HepG2FTO
DEPDC1BENSG00000035499.81046.25310780.697400.422302.956602.24030HepG2FXR1
DEPDC1BENSG00000035499.8644.07390846.11670-0.393602.263401.34560HepG2GNB2L1
DEPDC1BENSG00000035499.8397.11850577.25760-0.539603.319602.62330HepG2GPKOW
DEPDC1BENSG00000035499.8288.81850725.75580-1.3293019.9840018.51300HepG2HNRNPA1
DEPDC1BENSG00000035499.8860.253901233.92840-0.520407.975806.53750HepG2HNRNPA2B1
DEPDC1BENSG00000035499.8335.56830489.79580-0.545602.973201.52010HepG2HNRNPAB
DEPDC1BENSG00000035499.8318.11010807.23720-1.3435021.2447019.51840HepG2HNRNPC
DEPDC1BENSG00000035499.8522.13840648.74720-0.313202.624001.92520HepG2HNRNPF
DEPDC1BENSG00000035499.8808.147501223.10890-0.5979012.2955010.97040HepG2HNRNPL
DEPDC1BENSG00000035499.8263.90110550.89210-1.0618010.013808.90060HepG2HNRNPLL
DEPDC1BENSG00000035499.8488.96440627.58150-0.360102.143401.30620HepG2HNRNPM
DEPDC1BENSG00000035499.8633.48930801.90260-0.340103.011602.38120HepG2HNRNPU
DEPDC1BENSG00000035499.8516.23200638.82470-0.307402.154801.51100HepG2IGF2BP1
DEPDC1BENSG00000035499.8329.23070736.23360-1.1611014.4375013.03110HepG2IGF2BP2
DEPDC1BENSG00000035499.8544.63950819.12240-0.588804.338203.44060HepG2ILF2
DEPDC1BENSG00000035499.8511.599301018.67810-0.9936010.357108.75630HepG2LARP4
DEPDC1BENSG00000035499.8478.55930870.40860-0.8630010.290608.08050HepG2LIN28B
DEPDC1BENSG00000035499.8504.61890785.36040-0.638204.652903.85150HepG2MATR3
DEPDC1BENSG00000035499.8361.01920600.14090-0.733204.005702.75050HepG2METAP2
DEPDC1BENSG00000035499.8352.99530736.22200-1.0605011.273209.75320HepG2MSI2
DEPDC1BENSG00000035499.8411.41960803.87620-0.9664010.264709.08630HepG2NCBP2
DEPDC1BENSG00000035499.81118.164001331.40070-0.251802.118601.44950HepG2NOL12
DEPDC1BENSG00000035499.8434.24130742.06470-0.773004.027902.69140HepG2NONO
DEPDC1BENSG00000035499.8234.12510542.18870-1.211508.733407.11210HepG2PABPC1
DEPDC1BENSG00000035499.8554.13620715.97880-0.369702.073401.44040HepG2PABPC4
DEPDC1BENSG00000035499.8333.85790793.78620-1.2495017.2743015.48860HepG2PARN
DEPDC1BENSG00000035499.8329.67110767.17480-1.2185011.805809.88430HepG2PCBP2
DEPDC1BENSG00000035499.8647.96240803.13850-0.309702.092701.41170HepG2PRPF4
DEPDC1BENSG00000035499.8401.45660623.40030-0.634904.565203.55580HepG2PRPF8
DEPDC1BENSG00000035499.8674.813701270.91620-0.9133015.2676014.02080HepG2PUF60
DEPDC1BENSG00000035499.8845.471101349.10740-0.6742016.8019015.59600HepG2PUM1
DEPDC1BENSG00000035499.8566.576101348.13830-1.2506029.7256027.68890HepG2PUM2
DEPDC1BENSG00000035499.8688.26320824.37590-0.260301.860301.33400HepG2PUS1
DEPDC1BENSG00000035499.8252.52560740.31300-1.5517013.7189012.25760HepG2RAVER1
DEPDC1BENSG00000035499.8390.615501370.56740-1.8110027.9978026.69230HepG2RBM22
DEPDC1BENSG00000035499.8779.43490999.47850-0.358702.235601.35320HepG2RBM27
DEPDC1BENSG00000035499.81175.51440719.744900.7076012.6278011.45670HepG2RECQL
DEPDC1BENSG00000035499.8184.88540698.95160-1.9186037.2454035.40980HepG2RPLP0
DEPDC1BENSG00000035499.8290.49060727.26510-1.3240012.8534010.98060HepG2RPS10
DEPDC1BENSG00000035499.8117.26950557.88870-2.2501025.3031023.75210HepG2RPS19
DEPDC1BENSG00000035499.8313.60690921.80500-1.5555027.7794025.49620HepG2RPS2
DEPDC1BENSG00000035499.8320.70140595.62730-0.893206.852605.60310HepG2RPS3A
DEPDC1BENSG00000035499.8161.88800616.67200-1.9295027.2882025.31780HepG2RRP9
DEPDC1BENSG00000035499.8556.74290714.14850-0.359203.402502.70120HepG2SAFB2
DEPDC1BENSG00000035499.8362.10430545.24590-0.590504.389903.51880HepG2SF3B1
DEPDC1BENSG00000035499.8590.02810723.06100-0.293302.291401.74660HepG2SF3B4
DEPDC1BENSG00000035499.8803.962701218.55670-0.6000011.9463010.66340HepG2SLBP
DEPDC1BENSG00000035499.8590.86560832.84950-0.495206.240605.33500HepG2SMN1
DEPDC1BENSG00000035499.8373.07000754.99170-1.017009.428107.60460HepG2SMNDC1
DEPDC1BENSG00000035499.8332.03720606.69190-0.869605.542904.42610HepG2SNRNP70
DEPDC1BENSG00000035499.8841.314101548.05470-0.8797010.105409.31070HepG2SRFBP1
DEPDC1BENSG00000035499.81128.52010754.685900.580408.677007.94540HepG2SRSF1
DEPDC1BENSG00000035499.8617.963201254.81320-1.0219026.5527024.89040HepG2SRSF5
DEPDC1BENSG00000035499.8480.78610637.39390-0.406803.914103.10750HepG2SRSF7
DEPDC1BENSG00000035499.8347.43310613.94860-0.8214011.0632010.08860HepG2SRSF9
DEPDC1BENSG00000035499.8554.197701344.16410-1.2782017.4229016.36820HepG2SSB
DEPDC1BENSG00000035499.8323.30200607.61380-0.910306.897105.05340HepG2STAU1
DEPDC1BENSG00000035499.8961.942501427.09520-0.5691011.8677010.73240HepG2SUCLG1
DEPDC1BENSG00000035499.8332.90870614.25320-0.883709.715108.04690HepG2SUPT6H
DEPDC1BENSG00000035499.8185.72270804.47130-2.1149036.1986034.29550HepG2SUPV3L1
DEPDC1BENSG00000035499.8911.13200678.249000.425704.084103.42360HepG2TAF15
DEPDC1BENSG00000035499.8238.38720537.07970-1.1718012.4648011.09230HepG2TARDBP
DEPDC1BENSG00000035499.8270.20980539.20910-0.996809.065407.47370HepG2TFIP11
DEPDC1BENSG00000035499.8201.97890779.31770-1.9480040.1212038.62360HepG2TIAL1
DEPDC1BENSG00000035499.8326.33170786.15600-1.2685022.8673021.44700HepG2TRIM56
DEPDC1BENSG00000035499.8568.14970778.05460-0.453603.010602.35590HepG2U2AF1
DEPDC1BENSG00000035499.8172.06500615.74540-1.839405.161903.79010HepG2U2AF2
DEPDC1BENSG00000035499.8851.114601314.17370-0.626705.795404.55370HepG2UBE2L3
DEPDC1BENSG00000035499.8129.67480475.22610-1.8737026.0576023.86030HepG2UCHL5
DEPDC1BENSG00000035499.8216.26920615.20430-1.5082031.3677029.54940HepG2UPF1
DEPDC1BENSG00000035499.8439.09380736.65010-0.746504.861103.51110HepG2UPF2
DEPDC1BENSG00000035499.8525.04280791.91370-0.592904.510603.59280HepG2XRN2
DEPDC1BENSG00000035499.8559.45450792.55150-0.502506.260605.31660HepG2ZC3H8
DEPDC1BENSG00000035499.8279.23770676.60710-1.2768028.9466027.65720HepG2ZNF622
DEPDC1BENSG00000035499.81565.382801098.564200.510808.857307.91710K562AGGF1
DEPDC1BENSG00000035499.81399.026701835.44450-0.391703.694003.03570K562AQR
DEPDC1BENSG00000035499.8584.50240995.62440-0.7684012.641909.82290K562BCCIP
DEPDC1BENSG00000035499.8585.12290865.83150-0.565302.334601.53950K562BOP1
DEPDC1BENSG00000035499.81031.541301521.62720-0.560806.375304.48410K562CIRBP
DEPDC1BENSG00000035499.81147.748801399.59950-0.286202.748201.64690K562CPEB4
DEPDC1BENSG00000035499.8617.22110920.67190-0.576904.511303.51100K562CPSF6
DEPDC1BENSG00000035499.8764.393401448.34640-0.9220024.0853022.35200K562DDX47
DEPDC1BENSG00000035499.8373.55700516.71690-0.468002.893601.53200K562DHX30
DEPDC1BENSG00000035499.8338.32030496.40110-0.553103.672302.11220K562DNAJC21
DEPDC1BENSG00000035499.8676.426501074.64800-0.6679011.504009.00380K562EIF2S1
DEPDC1BENSG00000035499.8772.880401107.49880-0.519007.001305.93370K562EIF2S2
DEPDC1BENSG00000035499.8273.95580469.55170-0.777303.119402.04440K562EIF3A
DEPDC1BENSG00000035499.8577.73570979.86170-0.762209.808908.30670K562EIF3G
DEPDC1BENSG00000035499.8525.479401022.14230-0.9599014.5958012.63380K562EIF4A3
DEPDC1BENSG00000035499.81650.699902071.37150-0.327504.101502.96290K562EIF4G2
DEPDC1BENSG00000035499.8483.51330669.48010-0.469502.986301.80690K562FKBP4
DEPDC1BENSG00000035499.8653.60720936.67550-0.519102.960202.07480K562FMR1
DEPDC1BENSG00000035499.8417.19330793.87950-0.928209.625707.81210K562FTO
DEPDC1BENSG00000035499.8900.074901062.98560-0.240001.877101.35970K562FXR1
DEPDC1BENSG00000035499.8478.63940879.05070-0.877007.657406.33380K562GPKOW
DEPDC1BENSG00000035499.81115.368001475.90510-0.404103.862802.97540K562GRSF1
DEPDC1BENSG00000035499.8941.191801186.26910-0.333902.879701.78480K562HNRNPA1
DEPDC1BENSG00000035499.8226.56360771.11190-1.7670034.8550032.81740K562HNRNPC
DEPDC1BENSG00000035499.81009.869601313.64340-0.379404.227303.11380K562HNRNPU
DEPDC1BENSG00000035499.8295.24780750.50620-1.345909.107807.30740K562KRR1
DEPDC1BENSG00000035499.8992.145901492.07700-0.588707.685306.25710K562MAGOH
DEPDC1BENSG00000035499.81047.701901489.13080-0.507206.172804.71660K562MATR3
DEPDC1BENSG00000035499.81713.955001359.007400.334703.003802.04640K562MBNL1
DEPDC1BENSG00000035499.81233.839202207.86650-0.8395013.9660011.62680K562MSI2
DEPDC1BENSG00000035499.8809.22610982.08130-0.279302.596401.81160K562MTPAP
DEPDC1BENSG00000035499.81354.06640952.565000.507302.163001.40470K562NAA15
DEPDC1BENSG00000035499.8853.704301091.14060-0.354004.683303.74590K562NSUN2
DEPDC1BENSG00000035499.8771.809601181.19680-0.613902.564401.38820K562PABPC1
DEPDC1BENSG00000035499.8589.74210755.97760-0.358302.725801.93140K562POLR2G
DEPDC1BENSG00000035499.81163.722001449.60650-0.316902.825002.15450K562PTBP1
DEPDC1BENSG00000035499.81427.706302355.32480-0.7222017.2611014.95380K562PUM2
DEPDC1BENSG00000035499.81789.015401133.662400.658108.372307.47580K562PUS1
DEPDC1BENSG00000035499.81543.625001104.568800.482706.698105.80160K562RBM15
DEPDC1BENSG00000035499.81120.024901390.28970-0.311902.316801.55260K562RBM22
DEPDC1BENSG00000035499.81136.672901462.98970-0.364102.748701.66130K562NELFE
DEPDC1BENSG00000035499.8370.98730739.52670-0.995205.636004.46640K562RPS19
DEPDC1BENSG00000035499.8612.95500840.55400-0.455602.992301.94660K562RPS3
DEPDC1BENSG00000035499.8787.079901076.73660-0.452105.280904.18060K562SF3A3
DEPDC1BENSG00000035499.8441.87480835.87860-0.919707.255005.63220K562SF3B1
DEPDC1BENSG00000035499.8782.433601135.29490-0.537006.664105.30150K562SF3B4
DEPDC1BENSG00000035499.8756.487001152.33710-0.607205.694603.82240K562STAU1
DEPDC1BENSG00000035499.8814.179601438.31170-0.8210011.382509.79130K562TARDBP
DEPDC1BENSG00000035499.81127.445201387.38030-0.299302.513601.73840K562TIA1
DEPDC1BENSG00000035499.8727.498001092.95420-0.587207.541206.21360K562U2AF2
DEPDC1BENSG00000035499.8485.38290743.97220-0.616102.873201.83140K562UCHL5
DEPDC1BENSG00000035499.8342.584401156.96270-1.7558063.9687061.24220K562UPF1
DEPDC1BENSG00000035499.8853.139601420.44750-0.735508.423206.42970K562UTP3
DEPDC1BENSG00000035499.8783.75790989.97130-0.337002.626101.77140K562WDR3
DEPDC1BENSG00000035499.8843.031701029.49060-0.288302.975402.09780K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DEPDC1B is not available on ENCORE database.





10 RBPs can affect the splicing of DEPDC1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDEPDC1BENSG00000035499.8chr5-598949015989508759892738598937415989921759899394-0.133000.000000.00009excludedK562SRSF1
SEDEPDC1BENSG00000035499.8chr5-5992404059924190599015105990168359934576599347170.179000.002120.02645includedHepG2U2AF2
SEDEPDC1BENSG00000035499.8chr5-598949015989508759892738598937415989921759899355-0.134000.000000.00002excludedK562AQR
SEDEPDC1BENSG00000035499.8chr5-599432245994336059941318599414465998278859983054-0.054000.000100.00169excludedK562AQR
SEDEPDC1BENSG00000035499.8chr5-599240405992419059901510599016835993457659934717-0.165000.000030.01185excludedK562DROSHA
SEDEPDC1BENSG00000035499.8chr5-598949015989508759892738598937415989921759899394-0.180000.000180.01396excludedK562EFTUD2
SEDEPDC1BENSG00000035499.8chr5-598949015989508759892738598937415989921759899394-0.156000.000240.00790excludedHepG2SRSF1
SEDEPDC1BENSG00000035499.8chr5-598949015989508759892738598937415989921759899394-0.097000.003270.07664excludedHepG2SF3A3
SEDEPDC1BENSG00000035499.8chr5-598949015989508759892738598937415989921759899394-0.092000.000710.02849excludedK562TARDBP
SEDEPDC1BENSG00000035499.8chr5-5998355159983665599827885998305459995872599960170.199000.001670.08861includedHepG2SRSF9
SEDEPDC1BENSG00000035499.8chr5-599240405992419059901510599016835993457659934717-0.168000.000420.06912excludedK562NPM1
MXEDEPDC1BENSG00000035499.8chr5-59943224599433605998278859983054599413185994144659995872599959610.148000.002500.054901includedK562TARDBP
MXEDEPDC1BENSG00000035499.8chr5-59943224599433605998278859983054599413185994144659995872599959610.161000.000640.032741includedK562IGF2BP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DEPDC1B is not avaliable on ENCORE database.