TNRC6A

General Information

Gene Name       : TNRC6A
Gene ID             : ENSG00000090905.18
Essential Gene : No

Functions

Localization(RBPImage: TNRC6A)

Domains (AlphaFold: TNRC6A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TNRC6AENSG00000090905.1835.6725.0930.38ENCSR000AEF
HepG2TNRC6AENSG00000090905.1833.5932.6733.13ENCSR985KAT
K562TNRC6AENSG00000090905.1817.0120.8318.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
TNRC6A366K562ENCSR218NABENCSR800LOQENCAB000BGDRN033P1RevokedENCODE3
TNRC6A415HepG2ENCSR279BONENCSR188OHKENCAB000BGDRN033P1RevokedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
TNRC6AENCAB000BGDRN033P1Released, ENCODE3Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
TNRC6AK562shRNABGKLV11-61,BGKLV11-62BGKLV11-1,BGKLV11-2NotSatisfiedENCODE3
TNRC6AK562shRNABGKLV28-59,BGKLV28-60BGKLV28-1,BGKLV28-2NotSatisfiedENCODE3
TNRC6AK562shRNABGKLV29-59,BGKLV29-60BGKLV29-1,BGKLV29-2NotSatisfiedENCODE3
TNRC6AHepG2shRNABGHLV23-49,BGHLV23-50BGHLV23-1,BGHLV23-2redo transfection,redo transfectionNotSatisfiedENCODE3
TNRC6AHepG2shRNABGHLV26-59,BGHLV26-60BGHLV26-1,BGHLV26-2NotSatisfiedENCODE3
TNRC6AHepG2shRNABGHLV31-55,BGHLV31-56BGHLV31-1,BGHLV31-2NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-31,BGKcLV04-32BGKcLV04-1,BGKcLV04-20.0,0.0NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-31-D12,BGKcLV04-32-D12BGKcLV04-1,BGKcLV04-20.0,0.0NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-32-D12,BGKcLV04-31-D20BGKcLV04-1,BGKcLV04-20.0,0.0NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-31-D20,BGKcLV04-32-D20BGKcLV04-1,BGKcLV04-20.0,4.8NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-32-D20,BGKcLV04-31-D30BGKcLV04-1,BGKcLV04-24.8,NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-31-D30,BGKcLV04-32-D30BGKcLV04-1,BGKcLV04-2NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV04-32-D30,BGKcLV08-77BGKcLV04-1,BGKcLV04-2,0.0NotSatisfiedENCODE3
TNRC6AK562CRISPRBGKcLV08-77,BGKcLV08-78BGKcLV08-1,BGKcLV08-20.0,0.0NotSatisfiedENCODE4
TNRC6AHepG2CRISPRBGHcLV05-29,BGHcLV05-30BGHcLV05-1,BGHcLV05-2no clear band,NotSatisfiedENCODE4
TNRC6AHepG2CRISPRBGHcLV05-29-D13,BGHcLV05-30-D13BGHcLV05-1,BGHcLV05-2very light band,NotSatisfiedENCODE4
TNRC6AHepG2CRISPRBGHcLV05-30-D13,BGHcLV10-47BGHcLV05-1,BGHcLV05-2,no band on the positionNotSatisfiedENCODE4
TNRC6AHepG2CRISPRBGHcLV10-47,BGHcLV10-48BGHcLV10-1,BGHcLV10-2no band on the position,no band on the positionNotSatisfiedENCODE4
TNRC6AHepG2CRISPRBGHcLV10-49,BGHcLV10-50BGHcLV10-1,BGHcLV10-2no band on the position,no band on the positionNotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    TNRC6A: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Cytoplasm
  • Compartment/Organelle
  • Golgi
  • Cytoskeleton
  • Microtubule
  • Mitotic-Apparatus (Spindle; Centrosomes)












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    TNRC6AProduct_ID: RN033P
    Lot_ID: 1
    Source: MBLI
    Target Name: TNRC6A-human    		 HepG2_MBLI_RN033P_001_TNRC6A.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using TNRC6A specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-TNRC6A antibody (lanes under 'TNRC6A').
    		 K562_MBLI_RN033P_001_TNRC6A.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using TNRC6A specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-TNRC6A antibody (lanes under 'TNRC6A').








    RNA Targets

    • eCLIP assay for TNRC6A is not avaliable on ENCORE database.



    Proteins bound to RNA
    • TNRC6A RNA is bound by 52 proteins.  







    eCLIP assay for TNRC6A is not avaliable on ENCORE database.





    52 proteins are bound to TNRC6A RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr162481756824817600+3'-UTR,CDS3.485904.20387K562ZNF622
    chr162481757524817648+3'-UTR,CDS,intron-Proximal3.319795.46476K562AQR
    chr162483142424831496+3'-UTR,CDS,intron-Proximal3.566614.18806HepG2U2AF2
    chr162483428824834334+3'-UTR,CDS3.749245.31703HepG2EIF3H
    chr162483338324833444+3'-UTR,CDS,intron-Proximal3.595399.77227HepG2U2AF2
    chr162481752824817583+3'-UTR,CDS3.130084.73488HepG2GRWD1
    chr162483553024835584+3'-UTR,intron-Distal3.187525.09491HepG2EIF3H
    chr162482646724826597+3'-UTR,CDS,intron-Distal,intron-Proximal3.104526.37120K562DDX24
    chr162481703424817087+3'-UTR,CDS,intron-Proximal4.486424.45914HepG2PRPF8
    chr162482650724826568+3'-UTR,CDS,intron-Distal3.013063.41227K562UCHL5
    chr162483509224835142+3'-UTR,CDS,intron-Distal4.1255310.03354HepG2EIF3H
    chr162481801824818082+3'-UTR,CDS3.007056.17838K562ZNF622
    chr162481801724818071+3'-UTR,CDS3.372087.10608HepG2GRWD1
    chr162483482924834894+3'-UTR,CDS,intron-Distal4.643798.86394HepG2EIF3H
    chr162483482624834872+3'-UTR,CDS,intron-Distal3.174133.18660HepG2PABPN1
    chr162482066824820718+3'-UTR,5'-UTR,CDS,intron-Proximal4.523835.82129K562PUM2
    chr162483747324837523+3'-UTR,intron-Distal3.298523.90917HepG2ZC3H11A
    chr162481752624817551+3'-UTR,CDS,intron-Proximal4.223453.79199HepG2PPIG
    chr162483001624830055+3'-UTR,CDS,intron-Proximal4.223463.02181K562PRPF8
    chr162482813924828173+3'-UTR,CDS3.164683.26275K562BUD13
    chr162483000024830062+3'-UTR,CDS,intron-Proximal4.2050911.67817HepG2PRPF8
    chr162483653824836580+3'-UTR,intron-Distal4.043473.35113HepG2ZC3H11A
    chr162481549924815519+3'-UTR,CDS3.788643.34184HepG2GRWD1
    chr162483489424834965+3'-UTR,CDS,intron-Distal3.965367.26877HepG2EIF3H
    chr162483334124833440+3'-UTR,CDS,intron-Proximal3.275283.32027K562SMNDC1
    chr162483747724837531+3'-UTR,intron-Distal3.601053.23424HepG2FUBP3
    chr162481549624815535+3'-UTR,CDS,intron-Proximal4.153767.89209HepG2BCLAF1
    chr162481760024817648+3'-UTR,CDS,intron-Proximal3.823767.83009HepG2PRPF8
    chr162481803424818102+3'-UTR,CDS3.905534.50825K562DDX24
    chr162482652524826598+3'-UTR,CDS,intron-Distal,intron-Proximal4.093088.39611HepG2GRWD1
    chr162481543824815501+3'-UTR,CDS,intron-Proximal3.844048.06676HepG2SF3A3
    chr162481757424817599+3'-UTR,CDS4.998596.58593HepG2BCLAF1
    chr162483475224834808+3'-UTR,CDS,intron-Distal,intron-Proximal5.547478.22235HepG2EIF3H
    chr162483332624833441+3'-UTR,CDS,intron-Proximal3.951969.01749K562SF3B4
    chr162483679624836882+3'-UTR,intron-Distal4.094943.47315HepG2CSTF2
    chr162483508324835139+3'-UTR,CDS,intron-Distal3.301977.46872HepG2PABPN1
    chr162482810724828165+3'-UTR,CDS,intron-Proximal3.309515.76243HepG2BUD13
    chr162480119624801249+5'-UTR,CDS3.289716.18332HepG2GRWD1
    chr162480924924809314+5'-UTR,CDS,intron-Proximal3.188275.28960K562AQR
    chr162474116024741263+5'-UTR,CDS,intron-Proximal3.1631214.00525HepG2BUD13
    chr162480116824801251+5'-UTR,CDS3.356783.87218K562SAFB2
    chr162480247524802548+5'-UTR,CDS4.3360221.33009HepG2HLTF
    chr162480248924802538+5'-UTR,CDS5.994018.22235HepG2EIF3H
    chr162480224124802295+5'-UTR,CDS3.6679815.25431HepG2BCLAF1
    chr162480591924805947+5'-UTR,CDS3.130115.07457HepG2BCLAF1
    chr162480256624802615+5'-UTR,CDS3.856926.07514HepG2EIF3H
    chr162480258024802621+5'-UTR,CDS3.407393.99908K562BUD13
    chr162480089924800961+5'-UTR,CDS3.055966.70485HepG2GRWD1
    chr162480168224801728+5'-UTR,CDS4.906335.22630HepG2SLTM
    chr162480132824801383+5'-UTR,CDS3.3180710.53591HepG2QKI
    chr162480592024805979+5'-UTR,CDS4.720585.01312K562UCHL5
    chr162480258924802649+5'-UTR,CDS4.101164.38264K562SAFB
    chr162474115624741222+5'-UTR,CDS,intron-Proximal3.3451724.59268HepG2EFTUD2
    chr162480119424801237+5'-UTR,CDS4.663556.42098HepG2EIF3H
    chr162480065524800721+5'-UTR,CDS3.824365.31972HepG2EIF3H
    chr162480212124802239+5'-UTR,CDS3.253133.53159HepG2DROSHA
    chr162480118724801255+5'-UTR,CDS4.7306610.38007K562UCHL5
    chr162480927824809286+5'-UTR,CDS3.872826.67313HepG2BCLAF1
    chr162480238124802439+5'-UTR,CDS3.6325612.55157HepG2BCLAF1
    chr162480590724805962+5'-UTR,CDS4.577896.03821HepG2GRWD1
    chr162480268124802727+5'-UTR,CDS3.082105.12345HepG2GRWD1
    chr162480238124802426+5'-UTR,CDS3.801978.61219K562UCHL5
    chr162480720424807256+5'-UTR,CDS,intron-Proximal3.981518.61602K562AQR
    chr162480165624801720+5'-UTR,CDS3.848908.11960HepG2EIF3H
    chr162480301524803078+5'-UTR,CDS3.2678616.38648HepG2BCLAF1
    chr162480205624802149+5'-UTR,CDS3.2737118.93420HepG2HLTF
    chr162480923424809277+5'-UTR,CDS,intron-Proximal3.548263.69481K562UCHL5
    chr162480136324801434+5'-UTR,CDS3.9049113.38437HepG2HLTF
    chr162480477824804834+5'-UTR,CDS,intron-Distal,intron-Proximal3.0981110.08484HepG2U2AF2
    chr162480888324808897+5'-UTR,CDS,intron-Proximal4.479993.98203HepG2PRPF8
    chr162480718124807242+5'-UTR,CDS,intron-Proximal4.370986.08339HepG2SF3B4
    chr162480248224802532+5'-UTR,CDS4.2905416.36868HepG2BCLAF1
    chr162480584424805900+5'-UTR,CDS,intron-Proximal3.568363.99908K562BUD13
    chr162480283424802857+5'-UTR,CDS4.006213.70678K562BUD13
    chr162480596724806044+5'-UTR,CDS,intron-Proximal3.280878.35247HepG2GRWD1
    chr162480876224808834+5'-UTR,CDS,intron-Proximal4.2845912.58875K562AQR
    chr162480879424808860+5'-UTR,CDS,intron-Proximal4.3471513.80228HepG2AQR
    chr162480215424802247+5'-UTR,CDS3.250928.21279HepG2EIF3H
    chr162480131824801420+5'-UTR,CDS4.967429.11780K562QKI
    chr162480200524802069+5'-UTR,CDS3.624268.64848K562UCHL5
    chr162480173824801795+5'-UTR,CDS3.556796.54511K562UCHL5
    chr162480134224801402+5'-UTR,CDS5.0474710.25846HepG2EIF3H
    chr162480280124802880+5'-UTR,CDS3.367283.93112K562RBM15
    chr162480296624803119+5'-UTR,CDS3.2956415.33494K562ZNF622
    chr162480888524808949+5'-UTR,CDS,intron-Proximal5.477369.87486K562PRPF8
    chr162480111124801186+5'-UTR,CDS3.3681413.12156HepG2BCLAF1
    chr162480239224802461+5'-UTR,CDS3.900319.03438K562ZNF622
    chr162480302024803081+5'-UTR,CDS3.4678611.92300HepG2GRWD1
    chr162480717524807298+5'-UTR,CDS,intron-Proximal3.7143420.41270HepG2AQR
    chr162480214824802210+5'-UTR,CDS4.910585.85077HepG2FXR2
    chr162480208224802169+5'-UTR,CDS3.8465019.03024HepG2BCLAF1
    chr162480596624806041+5'-UTR,CDS,intron-Proximal3.712563.10693HepG2UCHL5
    chr162480590424805966+5'-UTR,CDS4.263523.48978HepG2SRSF9
    chr162480241324802490+5'-UTR,CDS3.411285.77413K562DDX24
    chr162480725324807300+5'-UTR,CDS,intron-Proximal3.837773.71591HepG2PRPF8
    chr162480274724802809+5'-UTR,CDS3.3089410.86085HepG2HLTF
    chr162480247924802534+5'-UTR,CDS3.321658.46796K562XRCC6
    chr162480282124802890+5'-UTR,CDS4.143168.57215HepG2SRSF9
    chr162480603824806101+5'-UTR,CDS,intron-Proximal3.5143114.36934K562AQR
    chr162480248224802535+5'-UTR,CDS4.3476310.54329K562UCHL5
    chr162480725824807277+5'-UTR,CDS,intron-Proximal4.8842513.90015K562AQR
    chr162480585624805909+5'-UTR,CDS,intron-Proximal3.824315.37538K562ZNF622
    chr162480059424800633+5'-UTR,CDS3.114895.54854HepG2GRWD1
    chr162480313324803246+5'-UTR,CDS,intron-Distal,intron-Proximal3.083016.49920HepG2KHSRP
    chr162480218824802241+5'-UTR,CDS4.2127113.38279HepG2BCLAF1
    chr162474104524741108+5'-UTR4.031789.51790HepG2PPIG
    chr162480265724802742+5'-UTR,CDS3.6998814.51936HepG2HLTF
    chr162480595224806044+5'-UTR,CDS,intron-Proximal3.9754016.34640HepG2BCLAF1
    chr162480223524802317+5'-UTR,CDS4.2155019.50996HepG2HLTF
    chr162480583624805886+5'-UTR,CDS,intron-Proximal4.853016.03362HepG2AQR
    chr162480308124803149+5'-UTR,CDS,intron-Proximal3.9985611.60690HepG2GRWD1
    chr162480312424803256+5'-UTR,CDS,intron-Distal,intron-Proximal4.3367610.93437K562KHSRP
    chr162480924924809274+5'-UTR,CDS3.195739.07205HepG2BCLAF1
    chr162480922824809304+5'-UTR,CDS,intron-Proximal3.7493310.01959HepG2PRPF8
    chr162480276124802812+5'-UTR,CDS3.679383.49192HepG2UCHL5
    chr162480199024802044+5'-UTR,CDS3.449258.23663HepG2BCLAF1
    chr162480920824809269+5'-UTR,CDS,intron-Proximal4.079727.15688K562BUD13
    chr162480888524808891+5'-UTR,CDS3.875688.08603HepG2BCLAF1
    chr162480881624808836+5'-UTR,CDS3.526885.97823HepG2BCLAF1
    chr162480597924806044+5'-UTR,CDS,intron-Proximal3.386158.75642K562UCHL5
    chr162480279824802834+5'-UTR,CDS3.1653010.62277HepG2BCLAF1
    chr162480718124807233+5'-UTR,CDS,intron-Proximal4.706656.08688K562GPKOW
    chr162480120324801254+5'-UTR,CDS3.4911911.13660HepG2HLTF
    chr162480224324802292+5'-UTR,CDS3.854866.39499HepG2GRWD1
    chr162480477724804841+5'-UTR,CDS,intron-Distal,intron-Proximal3.019626.47170HepG2U2AF1
    chr162480180024801828+5'-UTR,CDS3.673848.19964HepG2BCLAF1
    chr162480236524802463+5'-UTR,CDS3.406826.10515HepG2EIF3H
    chr162480919024809254+5'-UTR,CDS,intron-Proximal4.400687.39218K562SF3B4
    chr162480307824803132+5'-UTR,CDS3.7963913.45280HepG2BCLAF1
    chr162480718424807284+5'-UTR,CDS,intron-Proximal5.633849.95947K562SF3B4
    chr162480255024802623+5'-UTR,CDS3.6984615.14328HepG2HLTF
    chr162476212024762130+CDS,intron-Distal4.159555.06180HepG2BCLAF1
    chr162476204324762136+CDS,intron-Distal,intron-Proximal3.325864.45521HepG2TRA2A
    chr162476200724762130+CDS,intron-Distal,intron-Proximal3.133847.94673K562SF3B4
    chr162478863924788675+CDS3.469147.58656HepG2BCLAF1
    chr162474116524741176+CDS,intron-Proximal4.715538.83412HepG2FTO
    chr162474157824741612+CDS4.7476724.54731HepG2AQR
    chr162474156524741655+CDS,intron-Proximal3.407384.76195K562U2AF1
    chr162474156124741605+CDS,intron-Proximal5.0074919.36486HepG2U2AF2
    chr162474116424741186+CDS,intron-Proximal3.289765.80393HepG2ZNF800
    chr162478849324788618+CDS4.308915.62805HepG2UCHL5
    chr162478858724788650+CDS4.061336.21520HepG2EIF3H
    chr162482665124826723+CDS,intron-Proximal5.116376.39049HepG2U2AF2
    chr162474156424741615+CDS,intron-Proximal3.390937.30101HepG2U2AF1
    chr162474116424741258+CDS,intron-Proximal3.361856.39113HepG2XRN2
    chr162474156324741618+CDS,intron-Proximal4.911188.85037K562U2AF2
    chr162478854124788627+CDS3.016906.29223K562UCHL5
    chr162474156524741578+CDS,intron-Proximal5.5491718.56826HepG2AQR
    chr162478824724788326+CDS,intron-Proximal3.812673.47425HepG2U2AF1
    chr162474161624741633+CDS,intron-Proximal4.5578319.13701HepG2PRPF8
    chr162474116624741169+CDS,intron-Proximal4.82432400.00000HepG2PRPF8
    chr162476965624769710+CDS,intron-Distal,intron-Proximal4.864995.35117HepG2PRPF8
    chr162476966024769679+CDS,intron-Distal3.342124.79538HepG2BCLAF1
    chr162478847324788547+CDS3.217505.95627K562RBM15
    chr162482665424826746+CDS,intron-Distal,intron-Proximal3.781204.58287K562PRPF8
    chr162475892024758971+intron-Distal4.772156.36768K562HNRNPM
    chr162474750924747551+intron-Distal4.7482510.81726HepG2QKI
    chr162477926524779292+intron-Distal3.406003.35585HepG2QKI
    chr162475258724752638+intron-Distal3.458824.86331K562HNRNPM
    chr162483075724830832+intron-Distal5.127037.38844HepG2PTBP1
    chr162475264624752684+intron-Distal3.834846.96387K562EXOSC5
    chr162475247824752535+intron-Distal3.590874.57394K562HNRNPM
    chr162474748924747562+intron-Distal5.368886.75921K562QKI
    chr162477945624779499+intron-Distal3.494774.33990HepG2QKI
    chr162476061424760706+intron-Distal4.9927321.57878HepG2HNRNPM
    chr162479124824791294+intron-Distal3.944444.02766HepG2HNRNPC
    chr162479237924792445+intron-Distal4.194574.85913HepG2HNRNPC
    chr162476970224769807+intron-Distal,intron-Proximal4.5678917.96807HepG2U2AF2
    chr162475243724752550+intron-Distal4.3999814.95822HepG2MATR3
    chr162476081824760912+intron-Distal3.007947.51559K562MATR3
    chr162474194324741964+intron-Distal3.627168.02804HepG2HNRNPM
    chr162476081224760903+intron-Distal3.4518418.15444HepG2MATR3
    chr162475248024752509+intron-Distal3.351675.69808K562EXOSC5
    chr162476396724764022+intron-Distal6.2820915.16710HepG2HNRNPM
    chr162475959424759618+intron-Distal3.152484.46039HepG2MATR3
    chr162480515524805211+intron-Distal3.521324.70224K562KHSRP
    chr162474198724742026+intron-Distal3.389803.90146K562KHSRP
    chr162477701724777078+intron-Distal4.037526.77804HepG2QKI
    chr162477904824779175+intron-Distal4.5869519.86640HepG2QKI
    chr162475232924752364+intron-Distal6.0214110.77450HepG2HNRNPM
    chr162474196424741990+intron-Distal3.569607.42696HepG2HNRNPM
    chr162475543624755541+intron-Distal3.593614.94813HepG2HNRNPM
    chr162483226124832324+intron-Distal4.090143.45317HepG2HNRNPL
    chr162475890924758964+intron-Distal4.5684819.85050HepG2HNRNPM
    chr162480412024804179+intron-Distal3.126236.05691HepG2HNRNPC
    chr162475896424759029+intron-Distal4.5168514.27368HepG2HNRNPM
    chr162477063124770693+intron-Distal3.413319.14903HepG2SUGP2
    chr162480515624805213+intron-Distal3.774136.98930HepG2U2AF2
    chr162476061724760673+intron-Distal3.7219813.77055HepG2MATR3
    chr162475876924758833+intron-Distal4.1765815.84903HepG2HNRNPM
    chr162476054324760614+intron-Distal3.6826810.50062HepG2HNRNPM
    chr162476074324760793+intron-Distal5.163148.33028HepG2HNRNPM
    chr162476053424760578+intron-Distal3.355673.79878K562MATR3
    chr162480610124806196+intron-Distal,intron-Proximal3.2820214.20780K562AQR
    chr162476972924769833+intron-Distal,intron-Proximal3.599926.14054K562PRPF8
    chr162475290524752945+intron-Distal3.920938.27800K562EXOSC5
    chr162475190124751944+intron-Distal3.723149.44666K562EXOSC5
    chr162475229524752362+intron-Distal4.0578013.92430HepG2MATR3
    chr162477106824771166+intron-Distal3.4135214.34394HepG2SUGP2
    chr162476951724769627+intron-Distal,intron-Proximal4.811447.39957K562KHSRP
    chr162476381424763856+intron-Distal4.8798114.81581HepG2HNRNPM
    chr162475266424752718+intron-Distal4.597185.57532K562HNRNPM
    chr162476159324761722+intron-Distal3.3190313.56005HepG2KHSRP
    chr162475230024752329+intron-Distal5.2715413.67661HepG2HNRNPM
    chr162477902324779157+intron-Distal4.5101710.03528K562QKI
    chr162475250924752527+intron-Distal3.889794.31658K562EXOSC5
    chr162474185624741987+intron-Distal3.9968613.88157K562KHSRP
    chr162478290924783006+intron-Distal3.214473.42827HepG2KHSRP
    chr162474951724749584+intron-Distal4.005873.34627K562HNRNPK
    chr162475248824752542+intron-Distal3.077693.31176HepG2HNRNPM
    chr162477731724777354+intron-Distal3.477876.09178HepG2QKI
    chr162478101524781143+intron-Distal6.2279316.85467HepG2QKI
    chr162476062324760702+intron-Distal3.588227.03773K562HNRNPM
    chr162476053424760601+intron-Distal4.254016.71166K562EXOSC5
    chr162474127424741339+intron-Distal3.674617.29837HepG2RBM22
    chr162477695924777017+intron-Distal3.2039310.08112HepG2QKI
    chr162475259024752623+intron-Distal3.520255.57520K562EXOSC5
    chr162475230024752345+intron-Distal3.619507.41097K562EXOSC5
    chr162476971524769804+intron-Distal,intron-Proximal3.816907.79697K562U2AF2
    chr162477535724775445+intron-Distal3.898329.27432HepG2QKI
    chr162483754924837673+intron-Distal4.929678.01538HepG2CSTF2
    chr162475259324752744+intron-Distal4.0121910.20032HepG2MATR3
    chr162479096224791022+intron-Distal3.395623.84494HepG2QKI
    chr162483172824831798+intron-Distal,intron-Proximal3.843124.39246K562QKI
    chr162478496424785055+intron-Distal3.402697.01633K562KHSRP
    chr162475238024752399+intron-Distal3.772284.91037K562EXOSC5
    chr162477323324773319+intron-Distal3.928285.39628K562PTBP1
    chr162474208324742116+intron-Distal3.727653.89652HepG2SFPQ
    chr162476389724763944+intron-Distal4.426438.30916K562HNRNPM
    chr162474743624747475+intron-Distal5.140016.81929HepG2XRCC6
    chr162475164124751681+intron-Distal5.115638.04096K562EXOSC5
    chr162476045924760576+intron-Distal3.1676318.50433HepG2MATR3
    chr162475294824752996+intron-Distal5.5109516.55173HepG2HNRNPM
    chr162476073724760799+intron-Distal3.0956510.96074HepG2MATR3
    chr162480635624806468+intron-Distal3.9345513.77634HepG2HNRNPK
    chr162477195324772026+intron-Distal3.5127310.01330HepG2SUGP2
    chr162476007324760140+intron-Distal3.462376.21675K562MATR3
    chr162476080824760893+intron-Distal3.365048.42420K562EXOSC5
    chr162475166224751725+intron-Distal3.284895.89214HepG2SUGP2
    chr162477493324774996+intron-Distal4.029483.97888HepG2HNRNPL
    chr162475289424752914+intron-Distal3.043915.64929HepG2HNRNPM
    chr162476060724760683+intron-Distal3.325738.67716K562EXOSC5
    chr162476235624762510+intron-Distal3.758624.94908K562TIA1
    chr162477163024771667+intron-Distal3.608807.98957HepG2SUGP2
    chr162475168124751723+intron-Distal4.190087.61413K562EXOSC5
    chr162475276924752869+intron-Distal5.7485322.72120HepG2HNRNPM
    chr162474903624749087+intron-Distal3.593615.13070HepG2HNRNPM
    chr162480731224807365+intron-Distal,intron-Proximal4.103317.64728K562AQR
    chr162474755124747581+intron-Distal3.409814.40834HepG2QKI
    chr162475877324758842+intron-Distal3.753425.54542K562HNRNPM
    chr162480503324805155+intron-Distal,intron-Proximal4.8737114.66647K562KHSRP
    chr162478452224784591+intron-Distal3.412325.13070HepG2HNRNPM
    chr162476412124764158+intron-Distal4.1271610.69077HepG2HNRNPM
    chr162476236024762409+intron-Distal4.704365.50278HepG2TIAL1
    chr162474134824741399+intron-Distal3.4048212.32496HepG2EFTUD2
    chr162478105824781143+intron-Distal4.635803.92866K562PTBP1
    chr162475286924752894+intron-Distal3.497286.81718HepG2HNRNPM
    chr162476178824761847+intron-Distal4.327018.78208HepG2KHSRP
    chr162475225924752296+intron-Distal3.318835.29801K562EXOSC5
    chr162480931324809389+intron-Distal,intron-Proximal3.951883.61881HepG2TIAL1
    chr162477146824771563+intron-Distal4.909346.08961HepG2PTBP1
    chr162478481224784889+intron-Distal3.264705.39758K562KHSRP
    chr162476219624762314+intron-Distal,intron-Proximal4.4863014.42377K562KHSRP
    chr162475282424752879+intron-Distal3.214967.56195HepG2MATR3
    chr162478481124784894+intron-Distal4.831966.08205HepG2MATR3
    chr162475291424752948+intron-Distal4.9178224.80965HepG2HNRNPM
    chr162476389924763934+intron-Distal5.5249615.11129HepG2HNRNPM
    chr162475230624752348+intron-Distal3.979677.53863K562HNRNPM
    chr162478197924782086+intron-Distal3.209223.66317K562PTBP1
    chr162477218924772289+intron-Distal4.8428827.79692HepG2QKI
    chr162474756224747633+intron-Distal4.272565.93583K562QKI
    chr162480728124807385+intron-Distal,intron-Proximal4.786116.30839HepG2TIAL1
    chr162480360824803727+intron-Distal3.8381912.02995HepG2QKI
    chr162474128124741348+intron-Distal3.8340619.79361HepG2EFTUD2
    chr162476385624763899+intron-Distal6.3921241.47768HepG2HNRNPM
    chr162479156124791686+intron-Distal3.320564.09021HepG2HNRNPL
    chr162477214724772189+intron-Distal3.399105.91877HepG2QKI
    chr162480730024807380+intron-Distal,intron-Proximal3.533455.58296HepG2EFTUD2
    chr162475897924759065+intron-Distal3.539629.02352HepG2MATR3
    chr162476007424760135+intron-Distal4.3645810.29297HepG2MATR3
    chr162475289924752961+intron-Distal4.0312411.99451HepG2MATR3
    chr162474972424749806+intron-Distal3.472479.31430HepG2HNRNPK
    chr162476374124763861+intron-Distal3.077778.01712HepG2EXOSC5
    chr162475226224752300+intron-Distal3.636817.58130HepG2HNRNPM
    chr162474742924747472+intron-Distal3.795423.09172K562XRCC6
    chr162475230424752354+intron-Distal4.346063.47525K562MATR3
    chr162476376624763814+intron-Distal4.706037.68916HepG2HNRNPM
    chr162476985224769900+intron-Distal3.241357.80569HepG2SUGP2
    chr162476390824763935+intron-Distal4.068453.59909K562EXOSC5
    chr162483216524832226+intron-Distal4.8218413.98507HepG2QKI
    chr162479286724792959+intron-Distal3.122125.79202HepG2U2AF2
    chr162476184724761908+intron-Distal4.212428.53198HepG2KHSRP
    chr162474758124747656+intron-Distal3.134455.98712HepG2QKI
    chr162474188824741989+intron-Distal4.077089.78094HepG2KHSRP
    chr162478369724783706+intron-Distal3.485934.59331HepG2HNRNPC
    chr162481617924816261+intron-Distal,intron-Proximal4.446885.91698K562KHSRP
    chr162475294724752995+intron-Distal3.981526.25630K562HNRNPM
    chr162474120424741279+intron-Distal,intron-Proximal5.8923481.13993K562AQR
    chr162477595824776017+intron-Distal3.977613.95921HepG2U2AF2
    chr162475579224755820+intron-Distal3.177683.76460HepG2HNRNPL
    chr162475296824752999+intron-Distal3.582226.96387K562EXOSC5
    chr162479145924791544+intron-Distal4.033037.64658HepG2HNRNPL
    chr162476185624761930+intron-Distal3.8052611.99390K562KHSRP
    chr162478482424784901+intron-Distal5.7020411.13888HepG2HNRNPM
    chr162476193024761984+intron-Distal,intron-Proximal3.805267.64049K562KHSRP
    chr162477141424771599+intron-Distal4.850196.48506K562MATR3
    chr162477145724771580+intron-Distal3.726985.82860HepG2MATR3
    chr162479148724791580+intron-Distal3.452557.67272HepG2QKI
    chr162480507824805158+intron-Distal4.127956.36119HepG2KHSRP
    chr162475897124759034+intron-Distal3.124764.37857K562HNRNPM
    chr162475789124757979+intron-Distal3.703776.40701K562EXOSC5
    chr162475196724752010+intron-Distal3.907254.61282K562EXOSC5
    chr162475282524752905+intron-Distal4.0475415.11785K562EXOSC5
    chr162474122224741281+intron-Distal,intron-Proximal5.1123428.82498HepG2EFTUD2
    chr162475258724752623+intron-Distal5.5736512.29617HepG2HNRNPM
    chr162478292424783004+intron-Distal3.977584.10688K562KHSRP
    chr162483171924831798+intron-Distal,intron-Proximal4.4886718.86449HepG2QKI
    chr162477147524771544+intron-Distal3.2888511.45015HepG2SUGP2
    chr162475290524752947+intron-Distal4.241948.81047K562HNRNPM
    chr162476331124763368+intron-Distal3.290333.17872HepG2BCCIP
    chr162475268424752725+intron-Distal4.527766.71166K562EXOSC5
    chr162480661224806722+intron-Distal3.835103.18711HepG2ILF3
    chr162475189924751947+intron-Distal4.155684.95101HepG2HNRNPC
    chr162474167624741717+intron-Proximal4.307059.85374K562TIA1
    chr162480727724807312+intron-Proximal4.8693318.21561K562AQR
    chr162474116724741169+intron-Proximal6.7032986.11040HepG2AQR
    chr162474116924741235+intron-Proximal6.68333400.00000HepG2AQR
    chr162474116724741204+intron-Proximal6.2092673.91453K562AQR
    chr162480931324809358+intron-Proximal5.268265.28751K562RBM22
    chr162480875724808794+intron-Proximal3.756273.96535HepG2AQR
    chr162480931424809369+intron-Proximal5.778908.75564HepG2RBM22
    chr162474122024741257+intron-Proximal3.139983.00949HepG2ZNF800
    chr162474116924741261+intron-Proximal4.92232400.00000HepG2PRPF8
    chr162478868524788725+intron-Proximal4.672064.86944K562AQR
    chr162474119924741234+intron-Proximal4.1405411.35504HepG2FTO
    chr162480889724808934+intron-Proximal6.380857.36776HepG2PRPF8
    chr162474118024741236+intron-Proximal3.6365014.51179HepG2SUPV3L1
    chr162474116724741253+intron-Proximal4.1302512.04050HepG2U2AF1
    chr162480930424809347+intron-Proximal4.096166.23016HepG2PRPF8
    chr162474118624741220+intron-Proximal3.555457.74559HepG2ZNF800
    chr162481539824815486+intron-Proximal3.749743.24603K562KHSRP
    chr162474117624741199+intron-Proximal4.3985210.78595HepG2FTO
    chr162474163324741657+intron-Proximal4.8265818.79924HepG2PRPF8
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for TNRC6A is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for TNRC6A is not available on ENCORE database.

    • 89 RBPs can affect the levels of TNRC6A.  








    The Knockdown/knockout RNA-Seq assay for TNRC6A is not available on ENCORE database.





    89 RBPs can affect the gene expression of TNRC6A :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    TNRC6AENSG00000090905.132575.410202937.46620-0.189802.445401.86760HepG2ACO1
    TNRC6AENSG00000090905.131619.306202836.98330-0.809009.731908.80120HepG2AKAP1
    TNRC6AENSG00000090905.133845.147502951.168900.381707.586406.39070HepG2AKAP8L
    TNRC6AENSG00000090905.133028.581302347.341000.367502.983902.16880HepG2ASCC1
    TNRC6AENSG00000090905.134346.768302963.803000.552407.963807.01230HepG2BOP1
    TNRC6AENSG00000090905.133725.515302936.709500.343108.175707.15000HepG2CKAP4
    TNRC6AENSG00000090905.133878.370502720.958900.511206.405605.39330HepG2CPSF6
    TNRC6AENSG00000090905.131799.014602383.32470-0.405806.319604.78100HepG2YBX3
    TNRC6AENSG00000090905.131858.566501368.293200.441704.155102.86760HepG2CSTF2
    TNRC6AENSG00000090905.134288.732903025.596500.5032011.4522010.31990HepG2CELF1
    TNRC6AENSG00000090905.132891.315503253.44040-0.170202.382301.68710HepG2DAZAP1
    TNRC6AENSG00000090905.132813.654202346.401300.261902.130001.52620HepG2DDX21
    TNRC6AENSG00000090905.133210.878502296.765500.483307.183005.71930HepG2DDX24
    TNRC6AENSG00000090905.135170.180403089.840000.742605.011903.70980HepG2DDX59
    TNRC6AENSG00000090905.133874.897603162.763600.292902.329101.40140HepG2DDX5
    TNRC6AENSG00000090905.131886.642602334.56630-0.307301.868601.35080HepG2DDX6
    TNRC6AENSG00000090905.132018.569602340.34070-0.213402.146501.51930HepG2DNAJC21
    TNRC6AENSG00000090905.132902.222402244.152600.370902.934702.32430HepG2EIF2S1
    TNRC6AENSG00000090905.133662.806902479.993100.562505.475004.57670HepG2EIF4A3
    TNRC6AENSG00000090905.133261.514102414.734600.433602.749802.06240HepG2EIF4B
    TNRC6AENSG00000090905.134220.437703209.562400.394908.155006.85780HepG2EIF4G1
    TNRC6AENSG00000090905.135462.828504776.890200.193502.615802.02820HepG2ETF1
    TNRC6AENSG00000090905.133070.200702236.368500.457105.934404.36490HepG2FASTKD2
    TNRC6AENSG00000090905.132833.079201733.202600.7088012.5559010.94020HepG2FUBP3
    TNRC6AENSG00000090905.133485.766702321.237900.586506.233405.25410HepG2G3BP1
    TNRC6AENSG00000090905.133550.711102464.415100.526805.869404.56050HepG2G3BP2
    TNRC6AENSG00000090905.134183.125803084.491000.439403.933403.18090HepG2GPKOW
    TNRC6AENSG00000090905.133234.550302362.760300.453005.557004.68540HepG2HNRNPA1
    TNRC6AENSG00000090905.133092.896002359.454000.390403.289102.55870HepG2IGF2BP2
    TNRC6AENSG00000090905.133441.752302373.270400.536204.260302.99060HepG2KHSRP
    TNRC6AENSG00000090905.133514.389302503.263100.489404.833903.97440HepG2MAGOH
    TNRC6AENSG00000090905.133447.283702517.244300.453503.630202.91630HepG2MATR3
    TNRC6AENSG00000090905.133159.237002576.515800.294101.946601.41040HepG2NCBP2
    TNRC6AENSG00000090905.132673.470703226.09510-0.271103.177202.36240HepG2NOL12
    TNRC6AENSG00000090905.133181.900202609.994300.285702.374501.67930HepG2NSUN2
    TNRC6AENSG00000090905.133643.487202294.446200.667108.258207.02440HepG2PABPC4
    TNRC6AENSG00000090905.133072.986702368.942300.375307.123006.22360HepG2PCBP1
    TNRC6AENSG00000090905.132382.281701680.083200.503704.745703.72030HepG2PRPF8
    TNRC6AENSG00000090905.133892.901003269.008300.251904.967304.21980HepG2PUM1
    TNRC6AENSG00000090905.132449.035402991.98250-0.288904.975604.19330HepG2PUS1
    TNRC6AENSG00000090905.133281.255502610.576400.329804.369403.61030HepG2QKI
    TNRC6AENSG00000090905.134332.547302732.568900.664904.256103.39070HepG2RAVER1
    TNRC6AENSG00000090905.133539.216802369.297300.578909.731608.52440HepG2RBM25
    TNRC6AENSG00000090905.133295.420202682.652000.296704.619303.95290HepG2NELFE
    TNRC6AENSG00000090905.132971.948402498.584700.250203.501302.81730HepG2RECQL
    TNRC6AENSG00000090905.132429.046601661.930000.547404.901603.88780HepG2RRP9
    TNRC6AENSG00000090905.132489.484601949.990300.352303.040902.05340HepG2SERBP1
    TNRC6AENSG00000090905.131938.821102913.60440-0.587607.811006.68020HepG2SF3B1
    TNRC6AENSG00000090905.133044.366102509.599100.278604.198003.49360HepG2SF3B4
    TNRC6AENSG00000090905.133529.244802952.677200.257203.396802.63280HepG2SLBP
    TNRC6AENSG00000090905.132090.423902711.37100-0.375209.229308.16480HepG2SMN1
    TNRC6AENSG00000090905.135521.214203241.880800.768106.869305.63170HepG2SNRNP70
    TNRC6AENSG00000090905.133536.516502619.506700.4329010.243409.46170HepG2SRSF1
    TNRC6AENSG00000090905.133768.970803040.526100.309705.222704.40490HepG2SRSF5
    TNRC6AENSG00000090905.132888.159402131.132900.438409.989809.05430HepG2SRSF9
    TNRC6AENSG00000090905.134981.011103915.312100.347207.716006.94350HepG2SSB
    TNRC6AENSG00000090905.132909.131102168.281900.423903.207902.48550HepG2SUPV3L1
    TNRC6AENSG00000090905.133486.067902354.594100.5660012.4814011.41930HepG2TAF15
    TNRC6AENSG00000090905.134910.568602868.888100.7753014.3616012.91620HepG2TARDBP
    TNRC6AENSG00000090905.132910.544802163.467000.427805.873904.66770HepG2TIA1
    TNRC6AENSG00000090905.133824.064902536.969700.5919011.9320011.02150HepG2TIAL1
    TNRC6AENSG00000090905.133105.390402559.465000.278804.354303.67840HepG2TRIM56
    TNRC6AENSG00000090905.133799.866803008.483400.336803.780602.74400HepG2TUFM
    TNRC6AENSG00000090905.134099.328303154.954300.377703.729303.00270HepG2U2AF1
    TNRC6AENSG00000090905.133493.504002908.123500.264504.874204.02480HepG2ZC3H8
    TNRC6AENSG00000090905.135950.660804066.053400.5493024.7124023.48660HepG2ZNF622
    TNRC6AENSG00000090905.133144.843902483.335300.340606.309105.50500K562AGGF1
    TNRC6AENSG00000090905.133200.477202584.045700.308602.954202.27860K562AKAP8L
    TNRC6AENSG00000090905.133377.347802454.132700.460604.762604.03030K562AQR
    TNRC6AENSG00000090905.131339.892201584.79940-0.242202.738401.78200K562BCLAF1
    TNRC6AENSG00000090905.131527.607601863.65730-0.286902.582801.82370K562CPSF6
    TNRC6AENSG00000090905.13986.108001202.30670-0.286002.514201.51260K562CSTF2
    TNRC6AENSG00000090905.134042.292503486.300300.213402.918401.95470K562EIF4G2
    TNRC6AENSG00000090905.131911.629702457.98970-0.362703.400302.45270K562FIP1L1
    TNRC6AENSG00000090905.132264.298301432.607400.6603015.3446014.02930K562FXR1
    TNRC6AENSG00000090905.132344.881803122.40710-0.413104.873903.87220K562GRSF1
    TNRC6AENSG00000090905.132085.365201719.614600.278102.461801.44960K562HNRNPA1
    TNRC6AENSG00000090905.132485.507803332.46570-0.423004.453803.44940K562HSPD1
    TNRC6AENSG00000090905.132444.667901996.851200.291804.364303.36910K562MTPAP
    TNRC6AENSG00000090905.132818.120702153.264300.388102.555601.71510K562NAA15
    TNRC6AENSG00000090905.131940.613901495.245300.376003.553402.44720K562PCBP2
    TNRC6AENSG00000090905.131754.213602790.35230-0.669609.495807.72680K562PPIG
    TNRC6AENSG00000090905.131988.257501454.705800.450704.557503.59490K562PRPF8
    TNRC6AENSG00000090905.135213.655203803.909900.454706.282205.05670K562PUF60
    TNRC6AENSG00000090905.133139.832502562.502100.293002.313901.80820K562PUS1
    TNRC6AENSG00000090905.133004.046602496.906600.266702.974002.36340K562RBM15
    TNRC6AENSG00000090905.131720.703301383.813900.314202.728601.40750K562RBM25
    TNRC6AENSG00000090905.131879.035201468.607900.355402.741401.66500K562SAFB
    TNRC6AENSG00000090905.132324.490301408.783700.722402.964201.70370K562SF1
    TNRC6AENSG00000090905.132709.706702189.262200.307604.076203.09720K562SF3A3
    TNRC6AENSG00000090905.131318.707701692.48660-0.360002.414101.51120K562SF3B1
    TNRC6AENSG00000090905.132958.986801618.037500.870804.427502.76020K562SNRNP200
    TNRC6AENSG00000090905.132730.403202242.943800.283604.925903.72070K562SRPK2
    TNRC6AENSG00000090905.131627.809201926.10900-0.242802.786801.61860K562SRSF7
    TNRC6AENSG00000090905.132278.055601653.221600.462406.527205.25660K562SYNCRIP
    TNRC6AENSG00000090905.132044.782901414.175700.531904.750003.24160K562U2AF1
    TNRC6AENSG00000090905.132026.234601460.648900.472106.490805.26690K562U2AF2
    TNRC6AENSG00000090905.132885.030202093.260000.4627011.6141010.01620K562WDR43
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for TNRC6A is not available on ENCORE database.





    40 RBPs can affect the splicing of TNRC6A :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.096000.000340.00859excludedK562SRSF1
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.159000.000170.00923includedK562PRPF8
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.061000.000820.05233includedHepG2RBM22
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.194000.000100.01059includedHepG2RBM22
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.197000.000000.00000includedHepG2U2AF1
    SETNRC6AENSG00000090905.13chr16+247620462476213424741573247416212476965924769681-0.059000.004620.07125excludedHepG2U2AF1
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.192000.000480.01762excludedK562AKAP8L
    SETNRC6AENSG00000090905.13chr16+247415732474162124741033247411672478825324788348-0.357000.000040.00252excludedK562AKAP8L
    SETNRC6AENSG00000090905.13chr16+2478966424789789247885682478867924800552248031380.118000.000100.03568includedK562PUM1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.174000.000180.00653includedHepG2HNRNPK
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.093000.000490.04446includedHepG2QKI
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.153000.000620.05376includedHepG2QKI
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.064000.000040.00090includedHepG2U2AF2
    SETNRC6AENSG00000090905.13chr16+248267082482679624826467248266262482813624828277-0.084000.000020.00041excludedHepG2U2AF2
    SETNRC6AENSG00000090905.13chr16+248072272480726024805864248060402480881024808891-0.108000.000020.00048excludedHepG2U2AF2
    SETNRC6AENSG00000090905.13chr16+247620462476213424741573247416212478825324788679-0.181000.000010.00025excludedHepG2U2AF2
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.141000.001520.07775excludedHepG2AKAP1
    SETNRC6AENSG00000090905.13chr16+248072272480726024805864248060402480881024808891-0.214000.000310.06652excludedK562METAP2
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.201000.000000.00000includedK562AQR
    SETNRC6AENSG00000090905.13chr16+2478966424789789247885682478867924800552248031380.133000.007080.06173includedK562AQR
    SETNRC6AENSG00000090905.13chr16+248072272480726024805864248060402480881024808891-0.224000.000020.00037excludedK562AQR
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.144000.000360.01766includedK562FXR1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.145000.001490.08983includedHepG2DDX3X
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.138000.000070.00969excludedHepG2DDX3X
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.255000.000000.00026includedHepG2LIN28B
    SETNRC6AENSG00000090905.13chr16+247620462476213424741573247416212476965924769681-0.221000.000000.00001excludedK562PUS1
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.184000.006830.07856excludedK562PUS1
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.140000.000100.01031excludedHepG2NCBP2
    SETNRC6AENSG00000090905.13chr16+248072272480726024805864248060402480881024808891-0.123000.000010.00123excludedHepG2SFPQ
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.260000.000000.00000includedHepG2PTBP1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.445000.000000.00000includedHepG2PTBP1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.308000.000000.00000includedHepG2UPF1
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.166000.000490.06860includedHepG2HNRNPA1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.269000.000000.00000includedHepG2MATR3
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.169000.000760.01805includedK562U2AF1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.168000.000310.03226includedHepG2DDX6
    SETNRC6AENSG00000090905.13chr16+2478966424789789247885682478867924800552248031380.399000.000000.00000includedHepG2HNRNPL
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.412000.000000.00000includedHepG2HNRNPL
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.098000.000660.08993includedHepG2RBM15
    SETNRC6AENSG00000090905.13chr16+2474157324741621247410332474116724788253247883480.163000.000550.07907includedHepG2RBM15
    SETNRC6AENSG00000090905.13chr16+247620462476213424741573247416212478825324788679-0.147000.000000.00153excludedHepG2CDC40
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.182000.000030.00152includedHepG2SRSF1
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.074000.002370.05968excludedHepG2SF3A3
    SETNRC6AENSG00000090905.13chr16+248072272480726024805864248060402480881024808891-0.317000.000000.00000excludedHepG2SF3A3
    SETNRC6AENSG00000090905.13chr16+247415732474162124741033247411672476204624762134-0.112000.003660.08327excludedHepG2SF3A3
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.138000.000050.01101includedHepG2SSB
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.229000.000000.00015includedHepG2SSB
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.088000.000040.00697includedK562HNRNPUL1
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.162000.000130.01400includedHepG2TIAL1
    SETNRC6AENSG00000090905.13chr16+2478966424789789247885682478867924800552248031380.129000.000020.01982includedK562PUM2
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.210000.000000.00000includedHepG2SUPV3L1
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.177000.000020.01272includedHepG2BCCIP
    SETNRC6AENSG00000090905.13chr16+247415732474162124741033247411672478825324788348-0.258000.000930.03261excludedK562UTP18
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.190000.000070.00212includedK562U2AF2
    SETNRC6AENSG00000090905.13chr16+247896642478978924788568247886792480055224803138-0.219000.000200.00757excludedK562RBM15
    SETNRC6AENSG00000090905.13chr16+247415732474162124741033247411672476204624762134-0.269000.005300.09527excludedK562RBM15
    SETNRC6AENSG00000090905.13chr16+247415732474162124741033247411672478825324788348-0.512000.000000.00002excludedK562AGGF1
    SETNRC6AENSG00000090905.13chr16+2480722724807260248058642480604024808810248088910.186000.000000.00089includedHepG2DDX55
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.057000.001400.05261includedK562SF3B1
    SETNRC6AENSG00000090905.13chr16+248072272480726024805864248060402480881024808891-0.395000.000000.00014excludedK562SF3B1
    SETNRC6AENSG00000090905.13chr16+2478966424789789247885682478867924800552248031380.167000.000730.04791includedHepG2SRSF9
    SETNRC6AENSG00000090905.13chr16+2481602524816172248154972481564024816334248164720.422000.000000.00000includedK562PTBP1
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.341000.000000.00002includedK562PTBP1
    A3SSTNRC6AENSG00000090905.13chr16+2481548024815640248154972481564024809235248092870.271000.000280.00223longerK562AQR
    A3SSTNRC6AENSG00000090905.13chr16+2483417524834334248341942483433424833397248334680.074000.010550.05533longerK562AQR
    RITNRC6AENSG00000090905.13chr16+248163342481705424816334248164722481699424817054-0.333000.001440.02962excludedK562U2AF1
    RITNRC6AENSG00000090905.13chr16+248163342481705424816334248164722481699424817054-0.169000.001450.07228excludedHepG2SSB
    MXETNRC6AENSG00000090905.13chr16+24762046247621342476965924769681247415732474162124788253247886790.155000.000180.005871includedHepG2FTO
    MXETNRC6AENSG00000090905.13chr16+24741573247416212476204624762134247410332474116724769659247696810.162000.000080.003081includedHepG2FTO
    MXETNRC6AENSG00000090905.13chr16+2476204624762134247696592476968124741573247416212478825324788679-0.290000.000000.000052includedK562DROSHA
    MXETNRC6AENSG00000090905.13chr16+2476204624762134247696592476968124741573247416212478825324788679-0.264000.001090.021522includedK562PUS1
    MXETNRC6AENSG00000090905.13chr16+24826467248266262482667524826796248206702482080224828136248282770.074000.000060.000751includedHepG2U2AF2
    MXETNRC6AENSG00000090905.13chr16+24826467248266262482667524826796248206702482080224828136248282770.063000.005700.069461includedHepG2HNRNPUL1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for TNRC6A is not avaliable on ENCORE database.