TNRC6A      eCLIP in HepG2

Experiment Information (Status: Revoked)
415415-control
Exp_UID415415
RBPARK_Exp_name
ENCODE_ACCESSIONENCSR279BONENCSR188OHK
ENCODE_aliasgene-yeo:415gene-yeo:415-control-control
RBPTNRC6ATNRC6A
Cell_LineHepG2HepG2
Batch
Exp_typeeCLIPcontrol
ENCODE_Antibody_IDENCAB000BGDENCAB000BGD
AntibodyRN033PRN033P
Lot_num11
crosslinking_methodultraviolet irradiationultraviolet irradiation
queried_RNP_size_range175-300175-300
Self_consistency_hg38
rescue_GRCh38
StatusRevokedRevoked
ProjectENCODE3ENCODE3
ID173199




Replicate Information
Rep_UID415_01415_02415_INPUT
Exp UID415415415
Replicate_typerep1rep2control
ENCODE_ACCESSIONENCLB155HIPENCLB676CISENCLB394UKC
ENCODE_aliasgene-yeo:415_01gene-yeo:415_02gene-yeo:415_INPUT
Biosample NameHepG2_040915HepG2_061215HepG2_040915
Biosample_ENCODE_AccessionENCBS362ASGENCBS308ZPAENCBS362ASG
Biosample_ENCODE_Aliasgene-yeo:HepG2_040915gene-yeo:HepG2_061215gene-yeo:HepG2_040915
Cell_LineHepG2HepG2HepG2
Culture_Start_Date2015-04-092015-06-122015-04-09
Culture_End_Date2015-05-082015-06-302015-05-08
Passage535




QC Stats
Experiment QC
415415-control
Self_consistency_hg38
rescue_GRCh38


Replicate QC
Rep_UID415_01415_02415_INPUT
eCT
Usable_reads
Entropy_hg38




Library-Prep Information
Rep_UID415_01415_02415_INPUT
library_size_selection_methodagarose gel extractionagarose gel extractionagarose gel extraction
strand_specificityreversereversereverse
inline_barcode_1A03A04none
inline_barcode_2G07F05none
i5_barcode502502502
i7_barcode706706705




Sequencing Information
Rep_UID415_01415_02415_INPUT
seq_read_typepaired-endedpaired-endedpaired-ended
read_length505050
machine
flowcell
lane




File Information
No files are available for eCLIP experiment (Exp_UID=)415




Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=415)