TNRC6A      eCLIP in K562

Experiment Information (Status: Revoked)
366366-control
Exp_UID366366
RBPARK_Exp_name
ENCODE_ACCESSIONENCSR218NABENCSR800LOQ
ENCODE_aliasgene-yeo:366gene-yeo:366-control-control
RBPTNRC6ATNRC6A
Cell_LineK562K562
Batch
Exp_typeeCLIPcontrol
ENCODE_Antibody_IDENCAB000BGDENCAB000BGD
AntibodyRN033PRN033P
Lot_num11
crosslinking_methodultraviolet irradiationultraviolet irradiation
queried_RNP_size_range175-300175-300
Self_consistency_hg38
rescue_GRCh38
StatusRevokedRevoked
ProjectENCODE3ENCODE3
ID146161




Replicate Information
Rep_UID366_01366_02366_INPUT
Exp UID366366366
Replicate_typerep1rep2control
ENCODE_ACCESSIONENCLB313ZNNENCLB674YBJENCLB395FRD
ENCODE_aliasgene-yeo:366_01gene-yeo:366_02gene-yeo:366_INPUT
Biosample NameK562_051215K562_040915K562_051215
Biosample_ENCODE_AccessionENCBS489LOCENCBS931MQOENCBS489LOC
Biosample_ENCODE_Aliasgene-yeo:K562_051215gene-yeo:K562_040915gene-yeo:K562_051215
Cell_LineK562K562K562
Culture_Start_Date2015-05-122015-04-092015-05-12
Culture_End_Date2015-06-112015-05-082015-06-11
Passage454




QC Stats
Experiment QC
366366-control
Self_consistency_hg38
rescue_GRCh38


Replicate QC
Rep_UID366_01366_02366_INPUT
eCT
Usable_reads
Entropy_hg38




Library-Prep Information
Rep_UID366_01366_02366_INPUT
library_size_selection_methodagarose gel extractionagarose gel extractionagarose gel extraction
strand_specificityreversereversereverse
inline_barcode_1A04A03none
inline_barcode_2F05G07none
i5_barcode503503503
i7_barcode702702701




Sequencing Information
Rep_UID366_01366_02366_INPUT
seq_read_typepaired-endedpaired-endedpaired-ended
read_length505050
machine
flowcell
lane




File Information
No files are available for eCLIP experiment (Exp_UID=)366




Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=366)