RP11-637O19.3

General Information

Gene Name       : RP11-637O19.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-637O19.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-637O19.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-637O19.3 RNA is bound by 40 proteins.  







eCLIP assay for RP11-637O19.3 is not avaliable on ENCORE database.





40 proteins are bound to RP11-637O19.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr61092656910926667+3'-UTR,5'-UTR,CDS,intron-Proximal3.810824.30740K562PUM1
chr61091292810912984+3'-UTR,5'-UTR,CDS3.222086.32494K562UCHL5
chr61092656910926612+3'-UTR,5'-UTR,CDS,intron-Proximal3.920636.84505K562ZNF622
chr61091290510912941+3'-UTR,5'-UTR,CDS,intron-Proximal4.144365.47804K562ZNF622
chr61091290510912928+3'-UTR,5'-UTR,CDS,intron-Proximal3.476063.95937K562UCHL5
chr61092480810924877+3'-UTR,5'-UTR,CDS,intron-Proximal3.975218.51932K562ZNF622
chr61093061710930696+3'-UTR,5'-UTR,CDS3.269319.66202K562ZNF622
chr61089176010891811+3'-UTR,CDS3.480274.30396K562UCHL5
chr61091309910913147+3'-UTR,5'-UTR,CDS,intron-Proximal3.483407.90527K562ZNF622
chr61092472910924810+3'-UTR,5'-UTR,CDS3.976065.08388K562UCHL5
chr61092472810924815+3'-UTR,5'-UTR,CDS,intron-Proximal3.824216.26935K562DDX24
chr61089902810899091+3'-UTR,CDS,intron-Proximal4.2899210.30697K562AQR
chr61089821710898294+3'-UTR,CDS,intron-Proximal5.1927446.72308K562AQR
chr61090312410903178+3'-UTR,CDS4.994739.25096K562DDX24
chr61091038010910434+3'-UTR,5'-UTR,CDS,intron-Proximal3.296584.89070K562UCHL5
chr61092474610924808+3'-UTR,5'-UTR,CDS3.992258.70187K562ZNF622
chr61089443410894520+3'-UTR,CDS,intron-Proximal3.044404.76453K562GPKOW
chr61089174010891791+3'-UTR,CDS,intron-Proximal3.275873.91614K562BUD13
chr61092481010924876+3'-UTR,5'-UTR,CDS,intron-Proximal3.358097.55111K562UCHL5
chr61091299510912999+3'-UTR,5'-UTR,CDS,intron-Proximal4.152333.87582K562ZNF622
chr61089426610894349+3'-UTR,CDS,intron-Proximal3.566874.93120K562KHSRP
chr61090317810903279+3'-UTR,CDS,intron-Proximal4.5771410.73241K562PRPF8
chr61074806010748121+5'-UTR,intron-Proximal3.512365.58370HepG2PPIG
chr61074943410749460+5'-UTR,intron-Distal,intron-Proximal4.352266.48236HepG2DDX3X
chr61074804610748105+5'-UTR4.9948560.87546K562DDX3X
chr61074947110749502+5'-UTR,CDS,intron-Distal,intron-Proximal3.3948815.59007K562DDX3X
chr61074943410749471+5'-UTR,intron-Distal,intron-Proximal5.3646940.26579K562DDX3X
chr61074804810748114+5'-UTR3.1986811.85434K562FTO
chr61074937610749523+5'-UTR,CDS,intron-Distal,intron-Proximal4.507525.25202HepG2AQR
chr61074799510748116+5'-UTR,intron-Proximal4.059633.02371K562EIF3G
chr61074810510748115+5'-UTR,intron-Proximal5.5833046.71790K562DDX3X
chr61074803310748115+5'-UTR,intron-Proximal4.2319910.51564K562GEMIN5
chr61074947410749504+5'-UTR,CDS,intron-Distal,intron-Proximal4.609614.23238K562FTO
chr61074804410748115+5'-UTR,intron-Proximal8.4548442.36323HepG2DDX3X
chr61074804510748115+5'-UTR,intron-Proximal3.687974.12910K562DROSHA
chr61074943410749474+5'-UTR,intron-Distal,intron-Proximal3.0377211.09625K562FTO
chr61074985410749876+5'-UTR,CDS,intron-Distal,intron-Proximal3.1695411.47317K562DDX3X
chr61074985410749869+5'-UTR,CDS,intron-Distal,intron-Proximal4.359643.75892K562FTO
chr61075952310759604+3'-UTR,intron-Distal3.678618.33626HepG2UPF1
chr61075691510756993+3'-UTR,intron-Distal3.066453.20430K562LIN28B
chr61079132210791403+intron-Distal3.099297.56692HepG2HNRNPL
chr61090136610901469+intron-Distal3.802666.07515K562QKI
chr61091317110913304+intron-Distal,intron-Proximal3.392625.36888K562KHSRP
chr61091353410913629+intron-Distal3.060125.13831K562EXOSC5
chr61079102110791127+intron-Distal4.035909.67879HepG2HLTF
chr61078743110787573+intron-Distal3.203735.09109HepG2GTF2F1
chr61088728410887332+5'-UTR,intron-Distal3.160224.14618K562ZNF622
chr61089189710891973+intron-Distal,intron-Proximal4.670875.70555K562PRPF8
chr61075252710752592+intron-Distal4.296253.86809HepG2SUGP2
chr61089446410894568+intron-Distal,intron-Proximal5.6517410.48078K562RBM22
chr61077780510777910+intron-Distal6.8055613.41199K562AATF
chr61078121510781334+intron-Distal3.151893.45841K562HNRNPK
chr61090209710902142+intron-Distal3.130163.38830K562ILF3
chr61078744010787523+intron-Distal5.5673423.50124K562AGGF1
chr61080508510805196+intron-Distal4.454426.03318HepG2CSTF2
chr61080382910804002+intron-Distal3.593523.06411K562KHDRBS1
chr61090191010901986+intron-Distal3.610964.34776K562ILF3
chr61075399410754060+intron-Distal3.524603.30744K562PTBP1
chr61079123910791287+intron-Distal3.343573.34034HepG2HLTF
chr61078560610785729+intron-Distal3.365104.10487K562HNRNPK
chr61080720410807317+intron-Distal6.1137419.96509HepG2HNRNPL
chr61079094310790984+intron-Distal3.428534.16915HepG2HLTF
chr61078592710785994+intron-Distal3.114954.29385HepG2QKI
chr61078118810781345+intron-Distal3.893084.67922K562PTBP1
chr61075135610751434+CDS,intron-Distal,intron-Proximal3.516625.67297HepG2DDX3X
chr61090158110901632+intron-Distal3.276343.85034K562ILF3
chr61075721610757298+intron-Distal3.640176.66709HepG2CSTF2
chr61081735910817424+intron-Distal3.936163.08314K562TARDBP
chr61091185510911960+intron-Distal4.117033.72005K562MATR3
chr61091654110916585+intron-Distal4.653416.08869K562EXOSC5
chr61089448310894568+intron-Distal,intron-Proximal5.6482549.34223K562AQR
chr61075544810755466+CDS,intron-Distal,intron-Proximal3.463693.07411K562LIN28B
chr61075535810755426+CDS,intron-Distal,intron-Proximal3.812705.51703K562BUD13
chr61091320010913278+intron-Distal,intron-Proximal4.324933.31283K562PRPF8
chr61077032310770452+5'-UTR,CDS,intron-Distal,intron-Proximal3.610917.10944HepG2PPIG
chr61090235510902434+intron-Distal3.861306.36627K562ILF3
chr61075133510751432+CDS,intron-Distal,intron-Proximal4.162636.01372K562AQR
chr61075548710755538+CDS,intron-Distal,intron-Proximal3.474713.76553K562PRPF8
chr61083790610837981+intron-Distal4.182274.17759HepG2QKI
chr61078738810787440+intron-Distal4.026359.28858K562AGGF1
chr61088785810887862+intron-Distal3.003553.14959K562FMR1
chr61091516910915200+intron-Distal4.214543.01456K562EXOSC5
chr61075722210757270+intron-Distal5.132444.91909K562FMR1
chr61076316410763256+intron-Distal3.190453.51804HepG2HNRNPL
chr61075416510754250+intron-Distal3.118186.59727HepG2SUGP2
chr61090486110904923+intron-Distal3.458444.39592K562XRCC6
chr61078652510786605+intron-Distal6.5812517.21285HepG2QKI
chr61075136310751380+CDS,intron-Distal,intron-Proximal3.291249.88402K562DDX3X
chr61075396810754040+intron-Distal3.912043.06015K562MATR3
chr61078739010787564+intron-Distal4.4455817.80406K562HNRNPL
chr61089918910899344+intron-Distal3.6937912.18955K562KHSRP
chr61078728610787342+intron-Distal6.3300014.55065HepG2QKI
chr61078652010786613+intron-Distal5.2722814.13591K562AGGF1
chr61092090810921016+intron-Distal3.694063.02234K562KHSRP
chr61082607710826176+intron-Distal3.881545.32632HepG2QKI
chr61078741910787482+intron-Distal5.1800928.60181HepG2HNRNPL
chr61078742610787523+intron-Distal4.0484610.74214HepG2AGGF1
chr61091593410915974+intron-Distal3.903793.01445K562EXOSC5
chr61078737210787539+intron-Distal5.052277.30165K562QKI
chr61091726810917341+intron-Distal5.325738.36716K562EXOSC5
chr61074825310748322+intron-Distal3.712104.35635K562PRPF8
chr61078738710787432+intron-Distal5.1875214.74070HepG2QKI
chr61075139310751433+CDS,intron-Distal3.096929.60429K562DDX3X
chr61089706610897123+intron-Distal3.337686.10043K562ILF3
chr61090327910903347+intron-Distal,intron-Proximal3.469984.98422K562PRPF8
chr61075669910756774+3'-UTR,CDS,intron-Distal,intron-Proximal3.442986.30876K562LIN28B
chr61075694210757018+3'-UTR,intron-Distal4.0145719.25344K562PUM2
chr61078728610787340+intron-Distal3.992899.72420HepG2HNRNPL
chr61078745910787569+intron-Distal4.877714.07596K562GTF2F1
chr61090271410902783+intron-Distal4.305624.58544K562ILF3
chr61091609810916148+intron-Distal3.394493.14999K562EXOSC5
chr61092028010920365+intron-Distal3.460943.10641K562HNRNPM
chr61075398010754025+intron-Distal3.307615.10681HepG2SUGP2
chr61088785710887860+intron-Distal4.896593.81568K562FAM120A
chr61078728910787332+intron-Distal5.8946813.30406K562AGGF1
chr61075538610755432+CDS,intron-Distal3.486225.12820K562LIN28B
chr61078748210787557+intron-Distal4.8418122.44705HepG2HNRNPL
chr61075146010751516+CDS,intron-Distal,intron-Proximal4.932624.48002K562AQR
chr61092021010920299+intron-Distal4.7995012.87128K562EXOSC5
chr61078282710782878+intron-Distal3.155684.07077HepG2HNRNPC
chr61092044810920496+intron-Distal3.749735.20902K562EXOSC5
chr61078743210787576+intron-Distal6.0806469.85877HepG2QKI
chr61078110610781158+intron-Distal4.540863.41738HepG2PTBP1
chr61089451910894627+intron-Distal,intron-Proximal3.7645912.15581K562PRPF8
chr61091989210919947+intron-Distal4.960467.38693K562EXOSC5
chr61075135810751398+CDS,intron-Distal,intron-Proximal3.177543.91951K562PUM2
chr61078738610787419+intron-Distal3.930446.08725HepG2HNRNPL
chr61090181910901883+intron-Distal4.647596.13169K562ILF3
chr61078590310785927+intron-Distal3.007643.51714HepG2QKI
chr61074937410749427+intron-Distal,intron-Proximal4.560564.82767HepG2SF3B4
chr61089443710894446+intron-Proximal5.5301616.58923K562AQR
chr61074997810750028+intron-Distal,intron-Proximal4.245663.49003K562PRPF8
chr61089444610894483+intron-Proximal6.4138851.84890K562AQR
chr61089445810894519+intron-Proximal5.8043524.28038K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-637O19.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-637O19.3 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-637O19.3 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-637O19.3 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-637O19.3 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-637O19.3 is not available on ENCORE database.





2 RBPs can affect the splicing of RP11-637O19.3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-637O19.3ENSG00000272162.1chr6+1090625210906287109030591090319610907774109079170.324000.002040.06828includedK562PTBP1
MXERP11-637O19.3ENSG00000272162.1chr6+10903107109031801090777410907917109029091090299510910380109104330.210000.006870.079221includedK562U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-637O19.3 is not avaliable on ENCORE database.