NOL9

General Information

Gene Name       : NOL9
Gene ID             : ENSG00000162408.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NOL9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NOL9ENSG00000162408.108.837.398.11ENCSR000AEF
HepG2NOL9ENSG00000162408.105.119.397.25ENCSR985KAT
K562NOL9ENSG00000162408.1018.6420.2619.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NOL9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NOL9 RNA is bound by 21 proteins.  







eCLIP assay for NOL9 is not avaliable on ENCORE database.





21 proteins are bound to NOL9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165819236581974-3'-UTR,intron-Distal5.7966212.83212K562UPF1
chr165847106584753-3'-UTR,intron-Distal4.0692510.16051K562UPF1
chr165847416584815-3'-UTR,intron-Distal4.0089420.31728K562AKAP1
chr165858356585904-3'-UTR,intron-Distal4.060113.48187K562RBM15
chr165846076584668-3'-UTR,intron-Distal3.836175.47334HepG2LIN28B
chr165846056584673-3'-UTR,intron-Distal5.001256.99355K562LIN28B
chr165820686582121-3'-UTR,intron-Distal3.609698.27984K562UPF1
chr165856976585725-3'-UTR,intron-Distal5.156576.64872K562UPF1
chr165822536582320-3'-UTR,intron-Distal3.505575.45588K562PUM2
chr165829396582948-3'-UTR,intron-Distal3.7019826.02142K562UPF1
chr165829056582939-3'-UTR,intron-Distal3.6815528.30492K562UPF1
chr165842376584275-3'-UTR,intron-Distal4.107423.79142K562AKAP1
chr165841676584187-3'-UTR,intron-Distal4.460419.43510K562UPF1
chr165855866585652-3'-UTR,intron-Distal4.3243714.94065K562UPF1
chr165853126585368-3'-UTR,intron-Distal3.2766813.85758K562AKAP1
chr165859126586064-3'-UTR,CDS,intron-Distal3.251204.40995K562GRWD1
chr165846136584631-3'-UTR,intron-Distal4.510186.81876K562UPF1
chr165852536585376-3'-UTR,intron-Distal4.8703010.56484HepG2UPF1
chr165853226585376-3'-UTR,intron-Distal3.9896913.03891K562UPF1
chr165852446585322-3'-UTR,intron-Distal4.2671815.64327K562UPF1
chr165829056582948-3'-UTR,intron-Distal3.680733.48953K562HNRNPC
chr165852406585312-3'-UTR,intron-Distal3.5152911.59176K562AKAP1
chr165845316584595-3'-UTR,intron-Distal4.8740414.47702K562UPF1
chr165825666582653-3'-UTR,intron-Distal4.0511811.00079K562AKAP1
chr165847576584794-3'-UTR,intron-Distal3.9949910.31199K562UPF1
chr165851356585176-3'-UTR,intron-Distal5.671149.83131K562UPF1
chr165845436584586-3'-UTR,intron-Distal3.983876.09000K562AKAP1
chr166144566614592-5'-UTR,CDS,intron-Distal,intron-Proximal3.292383.52645HepG2NCBP2
chr166143176614393-CDS,intron-Distal4.294595.20653K562LIN28B
chr165859436586020-CDS,intron-Distal4.594885.17013K562RBM15
chr166049026604976-CDS,intron-Distal3.337623.55800HepG2BCLAF1
chr165867186586760-CDS,intron-Distal,intron-Proximal4.671314.97857HepG2AQR
chr165867096586772-CDS,intron-Distal,intron-Proximal4.451738.11807HepG2PRPF8
chr166141036614174-CDS,intron-Distal3.768384.41130K562AQR
chr166052086605252-CDS,intron-Distal,intron-Proximal4.116375.18845HepG2U2AF2
chr166104796610626-CDS,intron-Distal,intron-Proximal3.6299811.24658K562YBX3
chr166018226601907-CDS,intron-Distal,intron-Proximal4.194064.96658K562KHSRP
chr165890536589143-CDS,intron-Distal,intron-Proximal3.138643.68457K562LIN28B
chr165933576593427-CDS,intron-Distal3.166215.39816K562LIN28B
chr166049146604988-CDS,intron-Distal,intron-Proximal3.406515.90680HepG2PPIG
chr165867966586881-CDS,intron-Distal3.876013.56019HepG2GRWD1
chr165859436586026-CDS,intron-Distal3.059624.30396K562UCHL5
chr166036196603721-intron-Distal4.058797.83270K562ILF3
chr166111036611208-intron-Distal4.160863.06194K562ILF3
chr165924156592510-intron-Distal,intron-Proximal3.539794.51666K562RBM15
chr165999316600033-intron-Distal3.769123.06617K562HNRNPK
chr166062316606312-intron-Distal4.051103.19904K562TIA1
chr166045246604591-intron-Distal4.760439.39715K562ILF3
chr165965376596599-intron-Distal3.837683.06194K562ILF3
chr166078496607912-intron-Distal3.715823.24242HepG2HNRNPC
chr166045316604600-intron-Distal3.793295.63970K562TARDBP
chr165922256592283-intron-Distal,intron-Proximal4.316735.64238K562PRPF8
chr166029796603070-intron-Distal3.527095.22214K562ILF3
chr166133816613440-intron-Distal3.982793.57189K562ILF3
chr165867176586743-intron-Distal,intron-Proximal4.3330213.92114K562AQR
chr166047406604830-intron-Distal,intron-Proximal3.886309.84724K562PRPF8
chr166094516609543-intron-Distal,intron-Proximal3.868266.69500K562KHSRP
chr165867436586756-intron-Distal,intron-Proximal4.6668414.40768K562AQR
chr166046766604736-intron-Distal3.430873.52314K562DGCR8
chr165983136598417-intron-Distal3.723513.25538K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NOL9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NOL9 is not available on ENCORE database.

  • 81 RBPs can affect the levels of NOL9.  








The Knockdown/knockout RNA-Seq assay for NOL9 is not available on ENCORE database.





81 RBPs can affect the gene expression of NOL9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NOL9ENSG00000162408.10632.53930458.549500.464002.459001.95460HepG2AKAP1
NOL9ENSG00000162408.10596.00420873.01170-0.550707.413106.37750HepG2AUH
NOL9ENSG00000162408.10251.78400448.93110-0.834305.827804.57560HepG2BCLAF1
NOL9ENSG00000162408.10295.43610515.85830-0.804106.775605.73450HepG2CPSF6
NOL9ENSG00000162408.10525.99970640.05760-0.283102.308701.62350HepG2DAZAP1
NOL9ENSG00000162408.10225.76820377.28870-0.740804.253903.50090HepG2DDX6
NOL9ENSG00000162408.10286.77850380.12730-0.406502.443901.77850HepG2DNAJC21
NOL9ENSG00000162408.10688.22550400.924500.779506.557605.57220HepG2EIF4A3
NOL9ENSG00000162408.10580.21020390.297100.571902.834002.13850HepG2EIF4B
NOL9ENSG00000162408.10435.62890604.88290-0.473603.151202.28410HepG2EIF4G2
NOL9ENSG00000162408.10593.72480404.422200.553803.744802.94920HepG2FXR1
NOL9ENSG00000162408.10514.10580375.210300.454302.477901.84630HepG2G3BP1
NOL9ENSG00000162408.10563.22860398.269200.499903.139602.19060HepG2G3BP2
NOL9ENSG00000162408.10433.76920584.75740-0.430902.284701.70000HepG2GPKOW
NOL9ENSG00000162408.10299.31500426.87040-0.512102.957502.24350HepG2HNRNPC
NOL9ENSG00000162408.10707.26350379.819100.896809.551508.31830HepG2HNRNPK
NOL9ENSG00000162408.10483.84380583.04870-0.269101.878301.30850HepG2HNRNPL
NOL9ENSG00000162408.10591.89980320.842300.8834010.284808.66520HepG2HNRNPM
NOL9ENSG00000162408.10328.14450424.04830-0.369902.480001.90510HepG2HNRNPU
NOL9ENSG00000162408.10494.18610381.410600.373601.874401.30870HepG2IGF2BP2
NOL9ENSG00000162408.10552.39970383.601000.526002.719401.72650HepG2KHSRP
NOL9ENSG00000162408.10870.02380404.562901.104609.521008.32050HepG2MAGOH
NOL9ENSG00000162408.10592.46610406.842500.542203.220502.54400HepG2MATR3
NOL9ENSG00000162408.10713.28030416.438300.776306.667405.70340HepG2NCBP2
NOL9ENSG00000162408.10495.69280634.67880-0.356602.616301.87470HepG2NOL12
NOL9ENSG00000162408.10353.31130494.82000-0.486002.885302.12080HepG2NSUN2
NOL9ENSG00000162408.10530.81820381.443400.476604.117103.40430HepG2PCBP1
NOL9ENSG00000162408.10502.17050388.135400.371502.693602.15260HepG2PTBP1
NOL9ENSG00000162408.10285.77630605.85170-1.0841013.7205012.53070HepG2PUF60
NOL9ENSG00000162408.10624.97100444.185900.492501.971401.36680HepG2RAVER1
NOL9ENSG00000162408.10530.33540381.501100.475103.268902.54190HepG2RBM25
NOL9ENSG00000162408.10542.79650431.955400.329401.914501.44550HepG2NELFE
NOL9ENSG00000162408.10586.49860402.311500.543705.164904.35690HepG2RECQL
NOL9ENSG00000162408.10287.32490377.63470-0.394302.508601.89010HepG2SAFB2
NOL9ENSG00000162408.10896.34260531.672100.753405.806604.80640HepG2SF3A3
NOL9ENSG00000162408.10597.24740404.094600.563505.434804.65330HepG2SF3B4
NOL9ENSG00000162408.10477.46260580.90560-0.282902.025501.40790HepG2SLBP
NOL9ENSG00000162408.10746.76800421.789100.8240012.0952011.25590HepG2SRSF1
NOL9ENSG00000162408.10400.90250518.99150-0.372502.596201.92030HepG2SRSF7
NOL9ENSG00000162408.10430.07350343.149500.325602.006501.52180HepG2SRSF9
NOL9ENSG00000162408.10358.94410505.67070-0.494402.288101.66520HepG2SUPV3L1
NOL9ENSG00000162408.10470.35980379.125500.311001.772901.30490HepG2TAF15
NOL9ENSG00000162408.10403.46260543.94320-0.431002.567801.86510HepG2TARDBP
NOL9ENSG00000162408.10324.12770412.04820-0.346301.828801.40410HepG2TIAL1
NOL9ENSG00000162408.10243.97590415.72510-0.768907.873407.00060HepG2TRIM56
NOL9ENSG00000162408.10723.07390397.761700.862109.207308.05370HepG2U2AF1
NOL9ENSG00000162408.10454.05200626.49180-0.464402.337001.57240HepG2UBE2L3
NOL9ENSG00000162408.10772.66590455.227400.7632011.3701010.28890HepG2UTP3
NOL9ENSG00000162408.10582.72880425.554000.453404.226103.42360HepG2ZC3H8
NOL9ENSG00000162408.10869.711701251.06260-0.524508.316007.40430K562AGGF1
NOL9ENSG00000162408.103907.815001916.248601.0280023.3002021.78270K562AQR
NOL9ENSG00000162408.101011.098701306.44260-0.369704.617403.36050K562BCLAF1
NOL9ENSG00000162408.10780.888801015.12190-0.378502.589701.74760K562BOP1
NOL9ENSG00000162408.101042.137401339.93920-0.362602.913601.59620K562CIRBP
NOL9ENSG00000162408.101650.893302324.82510-0.493904.194602.34910K562CKAP4
NOL9ENSG00000162408.10803.957601079.36790-0.425004.014503.07100K562CPSF6
NOL9ENSG00000162408.10713.89200991.13120-0.473404.838703.38540K562CSTF2
NOL9ENSG00000162408.10660.80570828.91050-0.327002.403601.43540K562DDX3X
NOL9ENSG00000162408.102293.067101821.470900.332104.652603.83700K562DDX47
NOL9ENSG00000162408.101163.884701685.06270-0.533905.105104.17100K562EIF2S2
NOL9ENSG00000162408.101010.23940670.685700.590903.238102.14260K562EIF3A
NOL9ENSG00000162408.101505.518101082.490700.475806.529005.32210K562EIF3G
NOL9ENSG00000162408.101909.11250865.966001.1404024.5514021.84480K562EIF4A3
NOL9ENSG00000162408.101127.555201610.54720-0.514405.655304.41820K562FIP1L1
NOL9ENSG00000162408.10724.72760930.84490-0.361102.340201.50460K562FTO
NOL9ENSG00000162408.101803.40340900.561101.0017028.2644026.46310K562FXR1
NOL9ENSG00000162408.10790.272301030.53230-0.383002.969502.14690K562GPKOW
NOL9ENSG00000162408.101431.516302245.74140-0.649606.059704.93490K562GRSF1
NOL9ENSG00000162408.101320.25190982.153300.426704.278503.55260K562HNRNPC
NOL9ENSG00000162408.101612.657501248.704300.368902.690701.47890K562HNRNPK
NOL9ENSG00000162408.101546.586302183.62660-0.497605.627804.50910K562HSPD1
NOL9ENSG00000162408.10941.553201250.07090-0.408902.569101.59230K562IGF2BP2
NOL9ENSG00000162408.10932.757101271.55270-0.447004.261502.70990K562IGF2BP3
NOL9ENSG00000162408.101064.008401381.59080-0.376803.402202.47580K562KIF1C
NOL9ENSG00000162408.102035.875901313.927100.631709.398507.79050K562MAGOH
NOL9ENSG00000162408.101042.986401322.44200-0.342503.079501.93060K562MAK16
NOL9ENSG00000162408.10779.761801095.51730-0.490503.619101.53470K562PABPC4
NOL9ENSG00000162408.101990.596601169.097400.7677012.6372010.45140K562PCBP2
NOL9ENSG00000162408.101362.622901828.22130-0.424104.014703.00250K562PPIG
NOL9ENSG00000162408.102032.439201276.551100.6709011.4988010.20480K562PTBP1
NOL9ENSG00000162408.103444.294102630.695700.388705.798004.20420K562PUM1
NOL9ENSG00000162408.10789.778501291.19010-0.709208.520307.61480K562PUS1
NOL9ENSG00000162408.10976.535901257.90260-0.365303.311302.67190K562RBM15
NOL9ENSG00000162408.102026.635501224.143000.7272011.040809.19390K562RBM22
NOL9ENSG00000162408.10659.44360983.05730-0.576004.688102.87870K562RBM25
NOL9ENSG00000162408.10790.539901052.48730-0.412903.389801.49610K562RECQL
NOL9ENSG00000162408.101017.30840732.330800.474103.367802.25490K562RPS3
NOL9ENSG00000162408.101327.481501062.228700.321502.585001.54150K562SAFB
NOL9ENSG00000162408.10946.971001181.83790-0.319602.259701.32910K562SRSF5
NOL9ENSG00000162408.101671.930201195.728300.483506.338605.08910K562SYNCRIP
NOL9ENSG00000162408.10945.545501221.73450-0.369703.276702.37510K562TIA1
NOL9ENSG00000162408.10717.75470899.57390-0.325802.164301.34300K562TRIM56
NOL9ENSG00000162408.101193.625901739.89320-0.543604.481803.59060K562UPF1
NOL9ENSG00000162408.101079.414901488.79550-0.463903.451502.47660K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NOL9 is not available on ENCORE database.





15 RBPs can affect the splicing of NOL9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENOL9ENSG00000162408.10chr1-658675565868896581406658606365890536589231-0.091000.005840.08339excludedK562SF3B4
SENOL9ENSG00000162408.10chr1-660188966019876593339659350166048856604982-0.372000.000050.00166excludedK562SF3B4
SENOL9ENSG00000162408.10chr1-6605104660524065933396593501660963066097580.170000.000320.07566includedK562PUM1
SENOL9ENSG00000162408.10chr1-658675565869216581406658606365890536589231-0.068000.011660.09170excludedK562AQR
SENOL9ENSG00000162408.10chr1-660188966019876593339659350166048856605021-0.235000.000020.00047excludedK562AQR
SENOL9ENSG00000162408.10chr1-6601889660198765933396593501660963066097580.286000.001950.06521includedK562FXR1
SENOL9ENSG00000162408.10chr1-660510466052406593339659350166096306609758-0.296000.000910.06757excludedK562SUPV3L1
SENOL9ENSG00000162408.10chr1-660188966019876593339659350166096306609758-0.399000.000380.00762excludedK562PUS1
SENOL9ENSG00000162408.10chr1-6601889660198765933396593501660963066097580.274000.000050.01744includedK562APOBEC3C
SENOL9ENSG00000162408.10chr1-6605104660524065933396593501660963066097580.292000.003460.06680includedHepG2SRSF1
SENOL9ENSG00000162408.10chr1-660188966019876593339659350166096306609758-0.362000.001160.03827excludedK562UTP18
A3SSNOL9ENSG00000162408.10chr1-6604885660502166048856604982660510466052590.086000.002030.01307longerK562AQR
A3SSNOL9ENSG00000162408.10chr1-6605104660529666051046605240660963066097580.133000.000010.00011longerK562AQR
A3SSNOL9ENSG00000162408.10chr1-6586755658695765867556586889658905365892820.357000.000000.00000longerK562AQR
A3SSNOL9ENSG00000162408.10chr1-6609630660984266096306609758661045566106750.056000.000010.00007longerK562AQR
A3SSNOL9ENSG00000162408.10chr1-6589053658928265890536589231659202765921390.157000.000000.00000longerK562AQR
A5SSNOL9ENSG00000162408.10chr1-659252265928206592593659282065920546592139-0.078000.000100.05235shorterK562LARP4
MXENOL9ENSG00000162408.10chr1-658675565869216589053658923165814066586063659202765921390.216000.000010.000521includedK562DROSHA
MXENOL9ENSG00000162408.10chr1-658675565868896589053658923165814066586063659202765921390.216000.000010.000551includedK562DROSHA
MXENOL9ENSG00000162408.10chr1-660963066097816609781660984266051046605240661045566106750.066000.002240.018321includedK562AQR
MXENOL9ENSG00000162408.10chr1-660963066097816609781660983766051046605240661045566106750.086000.000440.004471includedK562AQR
MXENOL9ENSG00000162408.10chr1-660963066097816609781660991766051046605240661045566106750.054000.001090.009841includedK562AQR
MXENOL9ENSG00000162408.10chr1-660488566050626609630660983766018896601987661045566106750.103000.006280.043491includedK562AQR
MXENOL9ENSG00000162408.10chr1-660510466052406609630660983766048856604982661045566106750.063000.008130.053571includedK562AQR
MXENOL9ENSG00000162408.10chr1-660510466052406609630660978166048856604982661045566106750.063000.008130.053571includedK562AQR
MXENOL9ENSG00000162408.10chr1-660510466052406609630660984266048856604982661045566106750.067000.008180.053821includedK562AQR
MXENOL9ENSG00000162408.10chr1-660188966019876604885660506265933396593501660963066097580.198000.009270.059551includedK562AQR
MXENOL9ENSG00000162408.10chr1-660188966019876605104660525965933396593501660963066097580.164000.000080.000961includedK562AQR
MXENOL9ENSG00000162408.10chr1-660188966019876604885660502165933396593501660963066097580.272000.000010.000171includedK562AQR
MXENOL9ENSG00000162408.10chr1-66048856604982660510466052406593339659350166096306609758-0.211000.000000.000002includedK562AQR
MXENOL9ENSG00000162408.10chr1-66048856605021660510466052406593339659350166096306609758-0.209000.000000.000012includedK562AQR
MXENOL9ENSG00000162408.10chr1-66048856605062660510466052406593339659350166096306609758-0.166000.000930.008562includedK562AQR
MXENOL9ENSG00000162408.10chr1-658675565868896589053658923165814066586063659202765921390.208000.000200.011201includedK562SBDS
MXENOL9ENSG00000162408.10chr1-66018896601987660488566050626593339659350166096306609758-0.290000.000610.032032includedK562SAFB
MXENOL9ENSG00000162408.10chr1-658675565868896589053658923165814066586063659202765921390.169000.001790.044131includedK562PPIL4
MXENOL9ENSG00000162408.10chr1-65890536589231659202765921396586755658688965925226592820-0.119000.002410.040482includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NOL9 is not avaliable on ENCORE database.