ST3GAL6

General Information

Gene Name       : ST3GAL6
Gene ID             : ENSG00000064225.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ST3GAL6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ST3GAL6ENSG00000064225.1236.6026.3931.50ENCSR000AEF
HepG2ST3GAL6ENSG00000064225.129.7518.9514.35ENCSR985KAT
K562ST3GAL6ENSG00000064225.120.070.000.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ST3GAL6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ST3GAL6 RNA is bound by 20 proteins.  







eCLIP assay for ST3GAL6 is not avaliable on ENCORE database.





20 proteins are bound to ST3GAL6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr39851299298513058+3'-UTR,intron-Distal3.698975.19413HepG2LIN28B
chr39850379398503861+3'-UTR,CDS,intron-Distal3.461593.27569HepG2BCLAF1
chr39848724198487323+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5946314.04012HepG2U2AF2
chr39851266998512748+3'-UTR,intron-Distal,intron-Proximal3.601235.30252HepG2KHSRP
chr39848966198489747+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.748423.60305HepG2SF3B4
chr39845167398451727+5'-UTR,CDS,intron-Distal,intron-Proximal3.656454.46513HepG2NKRF
chr39845165498451748+5'-UTR,CDS,intron-Distal,intron-Proximal4.7088916.50145HepG2XPO5
chr39845156298451614+5'-UTR,intron-Distal,intron-Proximal4.686406.14550HepG2NKRF
chr39845178198451821+5'-UTR,CDS,intron-Distal4.581734.33932HepG2XRN2
chr39845171598451734+5'-UTR,CDS,intron-Distal4.554963.77801HepG2FKBP4
chr39845186798451920+intron-Distal,intron-Proximal5.489678.14036HepG2FKBP4
chr39845628598456341+intron-Distal3.426743.78707HepG2QKI
chr39845765698457700+intron-Distal4.600525.04993HepG2QKI
chr39845949898459552+intron-Distal3.566963.64762HepG2QKI
chr39847057698470632+intron-Distal5.055548.21857HepG2ILF3
chr39845194598452007+intron-Distal,intron-Proximal3.411047.88033HepG2NKRF
chr39847475798474822+intron-Distal3.478838.26814HepG2PTBP1
chr39845220598452269+intron-Distal3.021736.03912HepG2SFPQ
chr39846331998463368+intron-Distal4.977387.23521HepG2HNRNPM
chr39850757698507676+intron-Distal5.104227.16788HepG2RBFOX2
chr39845647998456526+intron-Distal3.548178.15069HepG2QKI
chr39846087098460946+intron-Distal4.646756.57464HepG2HNRNPL
chr39845655798456602+intron-Distal4.6613621.68367HepG2QKI
chr39845147898451514+intron-Distal3.273143.72734HepG2CSTF2T
chr39845971798459811+intron-Distal3.686354.19039HepG2PTBP1
chr39845940898459498+intron-Distal3.500649.16595HepG2QKI
chr39845654398456557+intron-Distal4.6947522.33832HepG2QKI
chr39845760798457652+intron-Distal4.718805.05488HepG2QKI
chr39846922998469286+intron-Distal4.560067.41529HepG2QKI
chr39849013998490190+intron-Distal4.227573.77802HepG2U2AF2
chr39845186598451933+intron-Distal,intron-Proximal3.734164.89423HepG2XRN2
chr39845271298452770+intron-Distal3.263213.54222HepG2TAF15
chr39845329698453379+intron-Distal3.678717.91672HepG2HNRNPM
chr39845421098454293+intron-Distal3.620984.94624HepG2MATR3
chr39846772998467814+intron-Distal3.190813.99165HepG2PTBP1
chr39845196698452023+intron-Distal3.059133.05560HepG2SFPQ
chr39845212698452161+intron-Distal4.006663.57264HepG2GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ST3GAL6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ST3GAL6 is not available on ENCORE database.

  • 62 RBPs can affect the levels of ST3GAL6.  








The Knockdown/knockout RNA-Seq assay for ST3GAL6 is not available on ENCORE database.





62 RBPs can affect the gene expression of ST3GAL6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ST3GAL6ENSG00000064225.8206.12150432.53690-1.069307.608206.15360HepG2ABCF1
ST3GAL6ENSG00000064225.8321.98860608.01930-0.917107.369806.54660HepG2AKAP1
ST3GAL6ENSG00000064225.8275.92920407.45170-0.562304.550303.58420HepG2AKAP8L
ST3GAL6ENSG00000064225.8238.52910390.56190-0.711404.394802.65600HepG2ATP5C1
ST3GAL6ENSG00000064225.8382.12440251.465800.603603.724303.04070HepG2BOP1
ST3GAL6ENSG00000064225.8365.69310517.99750-0.502302.497901.57870HepG2CCAR1
ST3GAL6ENSG00000064225.8895.10330477.970200.9050010.424009.00880HepG2CIRBP
ST3GAL6ENSG00000064225.8413.45350260.433900.666703.069902.26140HepG2CNOT7
ST3GAL6ENSG00000064225.8150.74910227.63170-0.594602.306301.31630HepG2CSTF2
ST3GAL6ENSG00000064225.8241.67450597.85230-1.3067025.7009023.87650HepG2DAZAP1
ST3GAL6ENSG00000064225.8225.98180330.45950-0.548303.079802.36690HepG2DDX21
ST3GAL6ENSG00000064225.81002.30670582.453100.783005.870904.99150HepG2DDX3X
ST3GAL6ENSG00000064225.8536.32190262.157501.032606.246304.80680HepG2DDX59
ST3GAL6ENSG00000064225.8282.89050411.54900-0.540802.236501.32530HepG2DDX5
ST3GAL6ENSG00000064225.8343.83210500.30010-0.541102.931002.29700HepG2DDX6
ST3GAL6ENSG00000064225.8301.74930387.98840-0.362702.049501.45290HepG2DKC1
ST3GAL6ENSG00000064225.8348.99360480.98950-0.462802.483201.91980HepG2EIF2S1
ST3GAL6ENSG00000064225.8722.94640589.873400.293402.295201.52070HepG2EIF4G1
ST3GAL6ENSG00000064225.8280.54070396.29260-0.498403.073002.19590HepG2EWSR1
ST3GAL6ENSG00000064225.8462.27680301.497600.616504.292102.73890HepG2FKBP4
ST3GAL6ENSG00000064225.8282.36160536.27370-0.925408.126306.98740HepG2FXR1
ST3GAL6ENSG00000064225.8349.92180497.50240-0.507702.863502.18720HepG2G3BP1
ST3GAL6ENSG00000064225.8121.54560199.58450-0.715503.214202.23990HepG2GEMIN5
ST3GAL6ENSG00000064225.8131.60770297.66940-1.177509.066607.99530HepG2HNRNPA1
ST3GAL6ENSG00000064225.8453.82580333.803800.443003.157702.39470HepG2HNRNPF
ST3GAL6ENSG00000064225.8280.61660503.69640-0.844006.716005.66300HepG2HNRNPK
ST3GAL6ENSG00000064225.8317.80070544.57810-0.777009.763508.57350HepG2HNRNPL
ST3GAL6ENSG00000064225.8548.38790249.741301.1347011.9161010.72610HepG2HNRNPLL
ST3GAL6ENSG00000064225.8436.00800328.908700.406602.819802.20730HepG2HNRNPU
ST3GAL6ENSG00000064225.8461.40960289.053800.674603.899402.43530HepG2HSPD1
ST3GAL6ENSG00000064225.8439.66110328.699200.419502.427901.74800HepG2IGF2BP1
ST3GAL6ENSG00000064225.8338.04690539.47240-0.674304.369203.59250HepG2MATR3
ST3GAL6ENSG00000064225.8468.92490273.913200.775504.757802.88960HepG2NKRF
ST3GAL6ENSG00000064225.8433.98740592.83250-0.450003.451802.60120HepG2NOL12
ST3GAL6ENSG00000064225.8352.72550221.444000.671503.705702.84280HepG2NSUN2
ST3GAL6ENSG00000064225.8474.08020304.913100.636606.270805.15750HepG2PRPF4
ST3GAL6ENSG00000064225.8163.33210279.54370-0.775303.513102.61330HepG2PRPF8
ST3GAL6ENSG00000064225.8609.41420475.158900.358902.473301.95140HepG2PTBP1
ST3GAL6ENSG00000064225.8381.80430565.92830-0.567803.797303.11120HepG2PUF60
ST3GAL6ENSG00000064225.8373.31540600.77880-0.686409.085608.14240HepG2PUM1
ST3GAL6ENSG00000064225.8442.82390600.32700-0.439003.115702.40450HepG2PUM2
ST3GAL6ENSG00000064225.8911.79570413.062801.1422028.1662026.58110HepG2PUS1
ST3GAL6ENSG00000064225.8261.11960386.42560-0.565501.989401.38180HepG2RAVER1
ST3GAL6ENSG00000064225.8363.58980534.54420-0.556004.761404.12830HepG2RBM22
ST3GAL6ENSG00000064225.8358.94240528.84070-0.559104.114803.47820HepG2NELFE
ST3GAL6ENSG00000064225.8106.89970218.11950-1.028906.295305.40900HepG2RPS19
ST3GAL6ENSG00000064225.8325.57360460.78850-0.501102.315101.69830HepG2SF3A3
ST3GAL6ENSG00000064225.8557.26270247.194101.1726013.6977012.25100HepG2SF3B1
ST3GAL6ENSG00000064225.8416.07990542.67990-0.383202.913802.19490HepG2SLBP
ST3GAL6ENSG00000064225.8243.35280341.58810-0.489203.377502.67850HepG2SMN1
ST3GAL6ENSG00000064225.8386.36670558.79680-0.532403.978603.25190HepG2SRSF5
ST3GAL6ENSG00000064225.8496.48990327.959100.598105.694904.75370HepG2SRSF7
ST3GAL6ENSG00000064225.8302.98160524.17050-0.790809.707108.86080HepG2SSB
ST3GAL6ENSG00000064225.8165.95040291.88730-0.814703.187301.86780HepG2STAU1
ST3GAL6ENSG00000064225.8387.54860635.48450-0.713509.158608.13840HepG2SUCLG1
ST3GAL6ENSG00000064225.8582.94790464.084000.328902.004001.51390HepG2TAF15
ST3GAL6ENSG00000064225.8403.51210243.422500.729005.126704.18390HepG2TARDBP
ST3GAL6ENSG00000064225.8458.91780282.876200.698002.611001.57070HepG2TBRG4
ST3GAL6ENSG00000064225.8358.12800241.718100.567002.627501.65300HepG2TFIP11
ST3GAL6ENSG00000064225.8367.01400213.041900.784606.082304.94710HepG2UCHL5
ST3GAL6ENSG00000064225.8167.88510394.53430-1.2327014.3628013.15960HepG2UTP3
ST3GAL6ENSG00000064225.8283.08700449.43550-0.666907.096806.32580HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ST3GAL6 is not available on ENCORE database.





9 RBPs can affect the splicing of ST3GAL6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEST3GAL6ENSG00000064225.8chr3+985068799850706698503788985038849851068498510837-0.369000.006450.09234excludedHepG2U2AF1
SEST3GAL6ENSG00000064225.8chr3+9849276398492827984916569849176098503788985038840.304000.000170.01979includedHepG2TBRG4
SEST3GAL6ENSG00000064225.8chr3+984899649849003498489722984898009849165698491760-0.240000.001100.01529excludedHepG2U2AF2
SEST3GAL6ENSG00000064225.8chr3+984899649849003498489722984898009849165698491760-0.260000.001080.06115excludedHepG2AKAP1
SEST3GAL6ENSG00000064225.8chr3+984752129847538498451079984513769848727398487373-0.509000.000230.01970excludedHepG2AKAP1
SEST3GAL6ENSG00000064225.8chr3+984899649849003498489722984898009849165698491760-0.223000.000050.00786excludedHepG2SRSF7
SEST3GAL6ENSG00000064225.8chr3+9849276398492827984916569849176098503788985038840.182000.001200.07834includedHepG2DDX3X
SEST3GAL6ENSG00000064225.8chr3+984899649849003498489722984898009849165698491760-0.273000.000000.00058excludedHepG2DDX3X
SEST3GAL6ENSG00000064225.8chr3+984752129847538498451079984513769848727398487373-0.359000.000540.04474excludedHepG2DDX3X
SEST3GAL6ENSG00000064225.8chr3+984752129847538498451079984513769848727398487373-0.422000.002310.07848excludedHepG2MATR3
MXEST3GAL6ENSG00000064225.8chr3+98492763984928279850378898503884984916569849176098506879985070660.304000.000350.009181includedHepG2U2AF1
MXEST3GAL6ENSG00000064225.8chr3+98492763984928279850378898503884984916569849176098506879985070660.261000.014120.071291includedHepG2U2AF2
MXEST3GAL6ENSG00000064225.8chr3+98492763984928279850378898503884984916569849176098506879985070660.252000.000760.066651includedHepG2SSB
MXEST3GAL6ENSG00000064225.8chr3+98503788985038849850687998507066984927639849282798507169985073070.185000.003790.094331includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ST3GAL6 is not avaliable on ENCORE database.