GPR35

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GPR35	ENSG00000178623.11	0.00	0.12	0.06	ENCSR000AEF
HepG2	GPR35	ENSG00000178623.11	21.95	8.45	15.20	ENCSR985KAT
K562	GPR35	ENSG00000178623.11	0.06	0.02	0.04	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GPR35 is not avaliable on ENCORE database.

Proteins bound to RNA

GPR35 RNA is bound by 45 proteins.

eCLIP assay for GPR35 is not avaliable on ENCORE database.

45 proteins are bound to GPR35 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	241570520	241570582	+	3'-UTR	4.49012	5.53140	HepG2	GRSF1
chr2	241558424	241558479	+	3'-UTR,CDS,intron-Proximal	4.57251	13.55747	HepG2	PRPF8
chr2	241558435	241558504	+	3'-UTR,CDS,intron-Proximal	4.60660	5.98353	HepG2	EFTUD2
chr2	241570303	241570390	+	3'-UTR	5.25234	10.01142	HepG2	UPF1
chr2	241570380	241570476	+	3'-UTR	3.93305	5.56088	HepG2	PABPN1
chr2	241570411	241570464	+	3'-UTR	3.87129	6.32804	HepG2	DDX55
chr2	241570417	241570477	+	3'-UTR	3.37295	3.13224	HepG2	ZC3H11A
chr2	241569310	241569369	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.45552	9.34933	HepG2	SF3B4
chr2	241570419	241570520	+	3'-UTR	4.50964	11.37281	HepG2	GRSF1
chr2	241570512	241570621	+	3'-UTR	4.12107	3.61011	HepG2	AKAP1
chr2	241570521	241570598	+	3'-UTR	3.62876	4.81659	HepG2	UPF1
chr2	241569281	241569377	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.43123	15.09067	HepG2	SF3A3
chr2	241570404	241570475	+	3'-UTR	3.17120	5.44944	HepG2	UPF1
chr2	241544970	241545070	+	5'-UTR,intron-Distal,intron-Proximal	4.92521	6.23935	HepG2	AQR
chr2	241544932	241544986	+	5'-UTR,intron-Distal	4.02763	11.34202	HepG2	DDX3X
chr2	241568850	241568957	+	5'-UTR,intron-Distal	4.31189	8.83932	HepG2	PRPF4
chr2	241569134	241569172	+	5'-UTR,intron-Distal	5.58874	11.61783	HepG2	CSTF2T
chr2	241568716	241568830	+	5'-UTR,intron-Distal	4.18801	13.68302	HepG2	PRPF4
chr2	241555860	241555901	+	5'-UTR,CDS	3.62014	3.16711	HepG2	DDX3X
chr2	241568875	241568939	+	5'-UTR,intron-Distal	3.47832	12.07396	HepG2	CSTF2T
chr2	241569242	241569297	+	5'-UTR,intron-Distal,intron-Proximal	3.67916	5.55742	HepG2	PRPF4
chr2	241555795	241555854	+	5'-UTR,CDS,intron-Proximal	3.20723	4.24993	HepG2	PPIG
chr2	241568721	241568868	+	5'-UTR,intron-Distal	4.35739	33.29346	HepG2	CSTF2T
chr2	241564730	241564784	+	5'-UTR,intron-Distal	4.15521	4.25018	HepG2	STAU2
chr2	241545950	241546028	+	3'-UTR,5'-UTR,intron-Distal	3.21436	3.39415	HepG2	DDX3X
chr2	241568866	241568957	+	5'-UTR,intron-Distal	3.99547	10.42969	HepG2	FAM120A
chr2	241568719	241568829	+	5'-UTR,intron-Distal	3.77786	15.89079	HepG2	FAM120A
chr2	241556698	241556773	+	3'-UTR,5'-UTR	3.05741	3.40321	HepG2	GRWD1
chr2	241564920	241564968	+	5'-UTR,intron-Distal	5.17057	22.54096	HepG2	CSTF2T
chr2	241545880	241545929	+	3'-UTR,5'-UTR,intron-Distal	4.43096	4.08604	HepG2	PPIG
chr2	241564710	241564750	+	5'-UTR,intron-Distal	4.22243	18.48462	HepG2	CSTF2T
chr2	241569247	241569327	+	5'-UTR,intron-Distal,intron-Proximal	4.15228	3.25089	HepG2	AQR
chr2	241569252	241569299	+	5'-UTR,intron-Distal,intron-Proximal	3.62042	10.41008	HepG2	CSTF2T
chr2	241544886	241544928	+	5'-UTR,intron-Distal	3.73901	6.05537	HepG2	DDX3X
chr2	241564750	241564796	+	5'-UTR,intron-Distal	3.85661	17.16492	HepG2	CSTF2T
chr2	241555809	241555860	+	5'-UTR,CDS	4.47824	7.63030	HepG2	DDX3X
chr2	241569039	241569109	+	5'-UTR,intron-Distal	3.93074	14.43060	HepG2	CSTF2T
chr2	241564912	241564973	+	5'-UTR,intron-Distal	3.15052	3.76556	HepG2	STAU2
chr2	241569242	241569300	+	5'-UTR,intron-Distal,intron-Proximal	3.05589	4.59930	HepG2	NKRF
chr2	241555748	241555819	+	5'-UTR,CDS,intron-Proximal	3.47866	3.39008	HepG2	AQR
chr2	241545866	241545950	+	3'-UTR,5'-UTR,intron-Distal	3.27625	5.57370	HepG2	DDX3X
chr2	241564848	241564897	+	5'-UTR,intron-Distal	5.28796	28.04310	HepG2	CSTF2T
chr2	241545975	241546019	+	3'-UTR,5'-UTR,intron-Distal	3.43770	4.13746	HepG2	PPIG
chr2	241568939	241568965	+	5'-UTR,intron-Distal	3.29433	7.01804	HepG2	CSTF2T
chr2	241564646	241564720	+	5'-UTR,intron-Distal	3.66119	5.19666	HepG2	STAU2
chr2	241569800	241569865	+	CDS	3.24999	3.30795	HepG2	SND1
chr2	241569902	241569950	+	CDS	5.15217	7.62496	HepG2	RBM15
chr2	241564081	241564118	+	intron-Distal	6.51570	23.81914	HepG2	CSTF2T
chr2	241562947	241563015	+	intron-Distal	5.04544	26.05556	HepG2	CSTF2T
chr2	241567276	241567379	+	intron-Distal	3.30198	23.02897	HepG2	CSTF2T
chr2	241553317	241553337	+	intron-Distal	8.13026	165.65780	HepG2	QKI
chr2	241563121	241563178	+	intron-Distal	3.93797	10.88032	HepG2	PRPF4
chr2	241562260	241562315	+	intron-Distal	4.46702	27.17366	HepG2	CSTF2T
chr2	241561864	241561889	+	intron-Distal	3.73191	8.61847	HepG2	CSTF2T
chr2	241568561	241568628	+	intron-Distal	5.44562	31.78410	HepG2	CSTF2T
chr2	241562436	241562493	+	intron-Distal	3.50708	12.38097	HepG2	CSTF2T
chr2	241565852	241565880	+	intron-Distal	5.74163	13.62736	HepG2	CSTF2T
chr2	241547213	241547305	+	intron-Distal	5.49757	11.57141	HepG2	PTBP1
chr2	241563437	241563488	+	intron-Distal	3.79851	4.80250	HepG2	CDC40
chr2	241564474	241564516	+	intron-Distal	3.10648	6.19764	HepG2	PRPF4
chr2	241564141	241564173	+	intron-Distal	4.65946	6.58205	HepG2	PRPF4
chr2	241553052	241553068	+	intron-Distal	7.61293	42.42196	HepG2	QKI
chr2	241568396	241568450	+	intron-Distal	4.62838	15.09805	HepG2	CSTF2T
chr2	241564267	241564330	+	intron-Distal	4.16927	15.71340	HepG2	PRPF4
chr2	241553407	241553474	+	intron-Distal	4.95577	5.50068	HepG2	DDX59
chr2	241553639	241553706	+	intron-Distal	8.28873	85.29177	HepG2	QKI
chr2	241553484	241553491	+	intron-Distal	6.73517	96.38477	HepG2	QKI
chr2	241566476	241566545	+	intron-Distal	4.10355	14.94313	HepG2	FAM120A
chr2	241559764	241559824	+	intron-Distal	4.01999	13.80989	HepG2	CSTF2T
chr2	241563296	241563316	+	intron-Distal	3.60144	4.98031	HepG2	PRPF4
chr2	241568545	241568626	+	intron-Distal	3.51535	8.31757	HepG2	PRPF4
chr2	241553246	241553269	+	intron-Distal	8.50609	151.20559	HepG2	QKI
chr2	241563048	241563066	+	intron-Distal	4.56539	17.56917	HepG2	CSTF2T
chr2	241553389	241553581	+	intron-Distal	7.09946	22.14370	K562	QKI
chr2	241553139	241553194	+	intron-Distal	8.36057	157.18967	HepG2	QKI
chr2	241562934	241563003	+	intron-Distal	4.76912	6.10461	HepG2	FUS
chr2	241563048	241563079	+	intron-Distal	4.75520	10.29014	HepG2	FAM120A
chr2	241563318	241563339	+	intron-Distal	4.04764	8.17769	HepG2	PRPF4
chr2	241566294	241566348	+	intron-Distal	4.35622	4.42691	HepG2	GTF2F1
chr2	241564580	241564637	+	intron-Distal	3.27517	7.29805	HepG2	GTF2F1
chr2	241566020	241566046	+	intron-Distal	4.43431	11.12397	HepG2	CSTF2T
chr2	241566480	241566550	+	intron-Distal	3.70127	23.85605	HepG2	CSTF2T
chr2	241559872	241559932	+	intron-Distal	3.77757	17.04103	HepG2	CSTF2T
chr2	241564449	241564542	+	intron-Distal	3.16612	3.81666	HepG2	SAFB
chr2	241562184	241562204	+	intron-Distal	5.65059	12.12716	HepG2	CSTF2T
chr2	241559878	241559959	+	intron-Distal	3.80229	8.63117	HepG2	FAM120A
chr2	241568628	241568682	+	intron-Distal	4.04828	13.21826	HepG2	CSTF2T
chr2	241553192	241553364	+	intron-Distal	5.96735	11.47623	HepG2	PCBP2
chr2	241565879	241565955	+	intron-Distal	3.00948	4.57682	HepG2	GTF2F1
chr2	241564323	241564349	+	intron-Distal	4.47206	20.84913	HepG2	CSTF2T
chr2	241562179	241562256	+	intron-Distal	4.40426	19.85239	HepG2	FAM120A
chr2	241565891	241565975	+	intron-Distal	5.43420	33.77921	HepG2	CSTF2T
chr2	241552954	241552985	+	intron-Distal	6.71167	55.65357	HepG2	QKI
chr2	241564156	241564180	+	intron-Distal	4.32960	4.69321	HepG2	GTF2F1
chr2	241563751	241563827	+	intron-Distal	3.44453	3.65183	HepG2	XRN2
chr2	241553270	241553316	+	intron-Distal	8.51624	217.65174	HepG2	QKI
chr2	241560070	241560136	+	intron-Distal	3.23919	9.92716	HepG2	CSTF2T
chr2	241565862	241565959	+	intron-Distal	4.55992	9.89497	HepG2	PRPF4
chr2	241545020	241545093	+	intron-Distal,intron-Proximal	4.50567	5.47493	HepG2	BUD13
chr2	241553491	241553505	+	intron-Distal	6.76983	76.72301	HepG2	QKI
chr2	241560000	241560058	+	intron-Distal	5.14364	19.09961	HepG2	CSTF2T
chr2	241565894	241565965	+	intron-Distal	4.31028	17.24371	HepG2	FAM120A
chr2	241562320	241562337	+	intron-Distal	3.34099	7.15148	HepG2	CSTF2T
chr2	241563436	241563482	+	intron-Distal	3.33968	4.32662	HepG2	RBM22
chr2	241566100	241566183	+	intron-Distal	3.85552	13.32330	HepG2	FAM120A
chr2	241553456	241553484	+	intron-Distal	8.14195	186.95559	HepG2	QKI
chr2	241560389	241560439	+	intron-Distal	3.45963	9.62104	HepG2	CSTF2T
chr2	241553619	241553639	+	intron-Distal	8.07656	74.72242	HepG2	QKI
chr2	241562204	241562238	+	intron-Distal	6.00961	36.02796	HepG2	CSTF2T
chr2	241563315	241563359	+	intron-Distal	3.21979	3.81185	HepG2	FASTKD2
chr2	241566254	241566346	+	intron-Distal	5.44498	11.60422	HepG2	PRPF4
chr2	241562238	241562260	+	intron-Distal	4.48147	20.88592	HepG2	CSTF2T
chr2	241564478	241564558	+	intron-Distal	3.69651	17.62386	HepG2	FAM120A
chr2	241564516	241564555	+	intron-Distal	3.61926	7.20286	HepG2	PRPF4
chr2	241563434	241563494	+	intron-Distal	4.26634	8.04402	HepG2	GTF2F1
chr2	241561594	241561600	+	intron-Distal	3.74136	6.26465	HepG2	CSTF2T
chr2	241560219	241560266	+	intron-Distal	3.50439	9.47641	HepG2	CSTF2T
chr2	241563063	241563072	+	intron-Distal	4.44048	5.90542	HepG2	PRPF4
chr2	241563314	241563361	+	intron-Distal	5.14837	15.23154	HepG2	FAM120A
chr2	241565100	241565157	+	intron-Distal	4.96063	16.07700	HepG2	PRPF4
chr2	241568524	241568561	+	intron-Distal	4.74027	14.05197	HepG2	CSTF2T
chr2	241552985	241553050	+	intron-Distal	8.71405	100.43258	HepG2	QKI
chr2	241568210	241568270	+	intron-Distal	4.37512	18.40609	HepG2	CSTF2T
chr2	241567598	241567679	+	intron-Distal	6.40890	20.46690	HepG2	CSTF2T
chr2	241562596	241562631	+	intron-Distal	3.69437	10.09869	HepG2	CSTF2T
chr2	241566266	241566337	+	intron-Distal	4.88382	30.83630	HepG2	CSTF2T
chr2	241565080	241565156	+	intron-Distal,intron-Proximal	4.31676	29.19889	HepG2	FAM120A
chr2	241557633	241557718	+	intron-Distal	3.14823	6.03810	HepG2	HNRNPL
chr2	241565105	241565187	+	intron-Distal	3.25993	4.57589	HepG2	SAFB
chr2	241563435	241563448	+	intron-Distal	3.67867	9.84900	HepG2	PRPF4
chr2	241559138	241559178	+	intron-Distal	3.92874	10.06144	HepG2	CSTF2T
chr2	241553513	241553630	+	intron-Distal	4.39524	5.33511	HepG2	HNRNPK
chr2	241559300	241559340	+	intron-Distal	4.42786	8.42985	HepG2	CSTF2T
chr2	241558597	241558631	+	intron-Distal	3.57279	3.24593	HepG2	XPO5
chr2	241553446	241553456	+	intron-Distal	8.53929	166.06623	HepG2	QKI
chr2	241548661	241548706	+	intron-Distal	4.26574	3.96879	HepG2	MATR3
chr2	241553413	241553440	+	intron-Distal	9.34272	148.53347	HepG2	QKI
chr2	241563749	241563846	+	intron-Distal	3.64687	13.51604	HepG2	PRPF4
chr2	241562965	241563011	+	intron-Distal	3.91051	5.33957	HepG2	FASTKD2
chr2	241559986	241560064	+	intron-Distal	3.39633	4.35431	HepG2	PRPF4
chr2	241568280	241568313	+	intron-Distal	4.09422	8.84510	HepG2	CSTF2T
chr2	241567903	241567935	+	intron-Distal	3.51835	6.96229	HepG2	CSTF2T
chr2	241553718	241553768	+	intron-Distal	6.70329	47.11708	HepG2	QKI
chr2	241564578	241564639	+	intron-Distal	4.29852	31.57929	HepG2	CSTF2T
chr2	241566127	241566193	+	intron-Distal	4.35325	28.20720	HepG2	CSTF2T
chr2	241563339	241563368	+	intron-Distal	3.96948	7.22938	HepG2	PRPF4
chr2	241567296	241567357	+	intron-Distal	4.08942	3.03048	HepG2	GTF2F1
chr2	241564292	241564353	+	intron-Distal	3.86660	5.26540	HepG2	GTF2F1
chr2	241564330	241564364	+	intron-Distal	3.78451	10.04312	HepG2	PRPF4
chr2	241565164	241565210	+	intron-Distal	4.55623	18.98081	HepG2	FAM120A
chr2	241553168	241553362	+	intron-Distal	7.26711	19.57000	K562	QKI
chr2	241562068	241562101	+	intron-Distal	3.76585	8.17012	HepG2	CSTF2T
chr2	241562946	241563006	+	intron-Distal	4.05990	17.55697	HepG2	FAM120A
chr2	241567492	241567558	+	intron-Distal	3.82137	13.00876	HepG2	CSTF2T
chr2	241553215	241553230	+	intron-Distal	9.14967	124.75719	HepG2	QKI
chr2	241565995	241566088	+	intron-Distal	3.74465	5.81632	HepG2	FUS
chr2	241552897	241552954	+	intron-Distal	6.22213	59.33610	HepG2	QKI
chr2	241564468	241564550	+	intron-Distal	4.76171	30.05396	HepG2	CSTF2T
chr2	241559451	241559509	+	intron-Distal	4.48279	18.65154	HepG2	CSTF2T
chr2	241563123	241563190	+	intron-Distal	3.37703	4.30293	HepG2	HNRNPU
chr2	241568520	241568653	+	intron-Distal	3.34497	13.36376	HepG2	FAM120A
chr2	241566569	241566594	+	intron-Distal	4.07447	10.06144	HepG2	CSTF2T
chr2	241562969	241562984	+	intron-Distal	4.15908	3.58513	HepG2	GTF2F1
chr2	241553577	241553619	+	intron-Distal	9.82440	203.20396	HepG2	QKI
chr2	241559710	241559751	+	intron-Distal	3.88788	8.61847	HepG2	CSTF2T
chr2	241563133	241563143	+	intron-Distal	4.13739	7.41879	HepG2	FAM120A
chr2	241566009	241566036	+	intron-Distal	3.90467	3.86417	HepG2	PRPF4
chr2	241553366	241553381	+	intron-Distal	8.35430	65.00438	HepG2	QKI
chr2	241560175	241560210	+	intron-Distal	3.59157	10.22167	HepG2	CSTF2T
chr2	241565847	241565880	+	intron-Distal	3.65735	6.32706	HepG2	FAM120A
chr2	241559851	241559953	+	intron-Distal	3.80444	6.98486	HepG2	PRPF4
chr2	241568181	241568210	+	intron-Distal	4.77029	11.12397	HepG2	CSTF2T
chr2	241562268	241562312	+	intron-Distal	4.04147	4.10258	HepG2	FUS
chr2	241563430	241563485	+	intron-Distal	3.00543	6.44000	HepG2	FUS
chr2	241565882	241565964	+	intron-Distal	3.59662	4.84789	HepG2	FUS
chr2	241562600	241562624	+	intron-Distal	3.78703	5.16644	HepG2	FAM120A
chr2	241553198	241553215	+	intron-Distal	8.57124	81.25783	HepG2	QKI
chr2	241547231	241547348	+	intron-Distal	3.44758	5.72064	HepG2	MATR3
chr2	241553067	241553106	+	intron-Distal	3.88238	4.25479	HepG2	PCBP2
chr2	241567792	241567861	+	intron-Distal	4.26807	14.46856	HepG2	CSTF2T
chr2	241549191	241549248	+	intron-Distal	3.48584	3.84025	HepG2	SUGP2
chr2	241565162	241565210	+	intron-Distal	4.47357	3.27582	HepG2	SFPQ
chr2	241563296	241563354	+	intron-Distal	3.13182	3.17878	HepG2	FUS
chr2	241566099	241566186	+	intron-Distal	5.38363	10.55191	HepG2	PRPF4
chr2	241563031	241563048	+	intron-Distal	5.28509	20.85684	HepG2	CSTF2T
chr2	241553230	241553246	+	intron-Distal	9.43421	143.66664	HepG2	QKI
chr2	241568255	241568303	+	intron-Distal	3.29760	4.13483	HepG2	PRPF4
chr2	241559873	241559922	+	intron-Distal	3.32416	3.66710	HepG2	GTF2F1
chr2	241553440	241553446	+	intron-Distal	8.00704	120.49992	HepG2	QKI
chr2	241564336	241564373	+	intron-Distal	3.99981	3.00241	HepG2	SFPQ
chr2	241565765	241565789	+	intron-Distal	4.01840	4.10323	HepG2	PRPF4
chr2	241563161	241563196	+	intron-Distal	4.88483	19.78731	HepG2	CSTF2T
chr2	241565873	241565979	+	intron-Distal	3.48178	6.91638	HepG2	GRSF1
chr2	241565109	241565154	+	intron-Distal	4.58611	19.31982	HepG2	CSTF2T
chr2	241559992	241560043	+	intron-Distal	3.91445	5.28966	HepG2	XRN2
chr2	241565483	241565536	+	intron-Distal	6.09185	23.90760	HepG2	FAM120A
chr2	241565495	241565530	+	intron-Distal	3.64348	5.32184	HepG2	PRPF4
chr2	241567972	241568013	+	intron-Distal	5.56285	10.82858	HepG2	CSTF2T
chr2	241565889	241566065	+	intron-Distal	4.20789	13.26288	HepG2	SFPQ
chr2	241553528	241553577	+	intron-Distal	9.06602	219.24894	HepG2	QKI
chr2	241566202	241566220	+	intron-Distal	4.40879	10.62681	HepG2	CSTF2T
chr2	241567280	241567374	+	intron-Distal	3.03874	9.60790	HepG2	FAM120A
chr2	241565496	241565531	+	intron-Distal	4.41637	4.41148	HepG2	GTF2F1
chr2	241568099	241568148	+	intron-Distal	4.26282	11.49466	HepG2	CSTF2T
chr2	241563561	241563625	+	intron-Distal	4.46609	30.42731	HepG2	XPO5
chr2	241566095	241566127	+	intron-Distal	3.88847	13.80807	HepG2	CSTF2T
chr2	241548469	241548494	+	intron-Distal	4.50682	4.80665	HepG2	QKI
chr2	241564016	241564042	+	intron-Distal	4.64624	14.65414	HepG2	CSTF2T
chr2	241562211	241562253	+	intron-Distal	3.30171	6.45096	HepG2	PRPF4
chr2	241565900	241566013	+	intron-Distal	4.48447	3.63869	HepG2	TAF15
chr2	241563033	241563048	+	intron-Distal	3.26431	6.16126	HepG2	FAM120A
chr2	241559453	241559505	+	intron-Distal	3.08624	6.16126	HepG2	FAM120A
chr2	241566479	241566565	+	intron-Distal	3.18273	7.27727	HepG2	STAU2
chr2	241566725	241566764	+	intron-Distal	3.19089	10.84878	HepG2	CSTF2T
chr2	241563744	241563868	+	intron-Distal	5.16063	57.87821	HepG2	CSTF2T
chr2	241564570	241564637	+	intron-Distal	3.50254	5.63550	HepG2	IGF2BP1
chr2	241563771	241563865	+	intron-Distal	3.20480	15.67217	HepG2	FAM120A
chr2	241565494	241565531	+	intron-Distal	6.39552	19.73569	HepG2	CSTF2T
chr2	241566271	241566331	+	intron-Distal	4.65819	4.62590	HepG2	FKBP4
chr2	241562256	241562328	+	intron-Distal	3.81621	17.65253	HepG2	FAM120A
chr2	241564129	241564190	+	intron-Distal	4.82935	24.64553	HepG2	CSTF2T
chr2	241564303	241564323	+	intron-Distal	3.72159	9.63192	HepG2	CSTF2T
chr2	241562180	241562319	+	intron-Distal	3.13069	3.33316	HepG2	SLTM
chr2	241548765	241548812	+	intron-Distal	3.79836	6.33688	HepG2	QKI
chr2	241564566	241564652	+	intron-Distal	3.55666	9.43385	HepG2	PRPF4
chr2	241563297	241563339	+	intron-Distal	4.93426	29.98140	HepG2	CSTF2T
chr2	241563785	241563854	+	intron-Distal	5.15794	9.02780	HepG2	GTF2F1
chr2	241553381	241553413	+	intron-Distal	9.10857	113.62135	HepG2	QKI
chr2	241563433	241563491	+	intron-Distal	5.00981	26.94462	HepG2	FAM120A
chr2	241560464	241560496	+	intron-Distal	4.34976	7.72301	HepG2	CSTF2T
chr2	241567679	241567733	+	intron-Distal	3.30952	7.00978	HepG2	CSTF2T
chr2	241553068	241553139	+	intron-Distal	7.98821	178.79580	HepG2	QKI
chr2	241563448	241563476	+	intron-Distal	3.31102	9.72744	HepG2	PRPF4
chr2	241554371	241554552	+	intron-Distal	3.57382	5.35418	HepG2	FUBP3
chr2	241559368	241559426	+	intron-Distal	3.09691	6.88183	HepG2	CSTF2T
chr2	241563426	241563476	+	intron-Distal	3.44171	3.67103	HepG2	FKBP4
chr2	241563422	241563498	+	intron-Distal	4.74424	43.58985	HepG2	CSTF2T
chr2	241558807	241558872	+	intron-Distal	3.13913	5.49247	HepG2	CSTF2T
chr2	241568105	241568163	+	intron-Distal	5.10131	7.56138	HepG2	FAM120A
chr2	241568102	241568178	+	intron-Distal	3.63833	7.76470	HepG2	XPO5
chr2	241563339	241563365	+	intron-Distal	4.92530	23.54650	HepG2	CSTF2T
chr2	241563115	241563161	+	intron-Distal	5.89053	30.44774	HepG2	CSTF2T
chr2	241562362	241562382	+	intron-Distal	5.48685	10.82858	HepG2	CSTF2T
chr2	241553501	241553671	+	intron-Distal	5.18552	10.86699	HepG2	PCBP2
chr2	241564294	241564356	+	intron-Distal	4.51175	19.13430	HepG2	FAM120A
chr2	241553505	241553528	+	intron-Distal	7.86874	98.94086	HepG2	QKI
chr2	241562939	241563017	+	intron-Distal	3.12101	11.40667	HepG2	PRPF4
chr2	241559584	241559688	+	intron-Distal	4.52410	19.78960	HepG2	CSTF2T
chr2	241564581	241564638	+	intron-Distal	3.68116	19.65551	HepG2	FAM120A
chr2	241560108	241560124	+	intron-Distal	4.53447	4.86316	HepG2	FAM120A
chr2	241558062	241558122	+	intron-Distal	3.74383	3.06084	HepG2	HNRNPK
chr2	241559099	241559131	+	intron-Distal	4.20612	7.72301	HepG2	CSTF2T
chr2	241563122	241563177	+	intron-Distal	3.12928	5.73110	HepG2	GTF2F1
chr2	241561734	241561746	+	intron-Distal	3.83660	6.85787	HepG2	CSTF2T
chr2	241566261	241566337	+	intron-Distal	3.44588	16.21397	HepG2	FAM120A
chr2	241545032	241545069	+	intron-Distal,intron-Proximal	3.64671	4.71457	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for GPR35 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GPR35 is not available on ENCORE database.
75 RBPs can affect the levels of GPR35.

The Knockdown/knockout RNA-Seq assay for GPR35 is not available on ENCORE database.

75 RBPs can affect the gene expression of GPR35 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GPR35	ENSG00000178623.7	403.24660	599.22630	-0.57140	2.39370	1.39290	HepG2	AATF
GPR35	ENSG00000178623.7	850.44210	1785.63080	-1.07010	14.57570	13.45330	HepG2	AKAP1
GPR35	ENSG00000178623.7	1169.51760	1477.39650	-0.33710	2.27340	1.55810	HepG2	ASCC1
GPR35	ENSG00000178623.7	903.24820	506.48530	0.83450	7.17420	5.80640	HepG2	BCLAF1
GPR35	ENSG00000178623.7	591.91210	244.47460	1.27560	7.38840	6.46670	HepG2	BOP1
GPR35	ENSG00000178623.7	335.63140	224.43020	0.58050	2.15510	1.53870	HepG2	CPSF6
GPR35	ENSG00000178623.7	797.85730	523.34950	0.60830	7.40950	5.76190	HepG2	YBX3
GPR35	ENSG00000178623.7	963.33630	573.25300	0.74880	5.46450	4.42260	HepG2	DDX55
GPR35	ENSG00000178623.7	645.86520	495.63120	0.38190	2.51770	1.58160	HepG2	DHX30
GPR35	ENSG00000178623.7	647.68160	933.35020	-0.52710	5.89860	4.97770	HepG2	DKC1
GPR35	ENSG00000178623.7	683.92840	513.86550	0.41240	3.65950	2.85690	HepG2	DNAJC21
GPR35	ENSG00000178623.7	698.33520	509.36350	0.45510	5.36090	4.49750	HepG2	DNAJC2
GPR35	ENSG00000178623.7	425.77900	662.52890	-0.63790	4.99660	3.79210	HepG2	EEF2
GPR35	ENSG00000178623.7	681.76660	1560.71970	-1.19490	18.06580	16.44290	HepG2	EIF4A3
GPR35	ENSG00000178623.7	1074.71070	1519.87160	-0.50000	3.12250	2.39440	HepG2	EIF4B
GPR35	ENSG00000178623.7	1211.96300	767.44730	0.65910	7.79380	6.45540	HepG2	EIF4G2
GPR35	ENSG00000178623.7	815.18170	1097.48450	-0.42900	3.80960	2.89580	HepG2	FUBP3
GPR35	ENSG00000178623.7	1132.71580	1575.16360	-0.47570	4.07220	3.24410	HepG2	FXR1
GPR35	ENSG00000178623.7	991.69050	1460.95170	-0.55890	4.94330	4.06500	HepG2	G3BP1
GPR35	ENSG00000178623.7	968.57670	1551.30570	-0.67950	7.79720	6.28490	HepG2	G3BP2
GPR35	ENSG00000178623.7	497.08380	254.37940	0.96640	6.65200	5.68800	HepG2	GPKOW
GPR35	ENSG00000178623.7	1052.42600	697.19010	0.59400	3.01600	1.58650	HepG2	HNRNPA0
GPR35	ENSG00000178623.7	404.02570	518.78880	-0.36070	1.84090	1.30110	HepG2	HNRNPA1
GPR35	ENSG00000178623.7	798.91700	541.41470	0.56120	7.68550	6.56970	HepG2	HNRNPF
GPR35	ENSG00000178623.7	1153.26620	1479.91450	-0.35980	2.79470	2.09290	HepG2	HNRNPK
GPR35	ENSG00000178623.7	374.75940	242.76170	0.62630	3.11590	2.45280	HepG2	HNRNPLL
GPR35	ENSG00000178623.7	394.15160	557.34200	-0.49980	2.45690	1.55850	HepG2	HNRNPM
GPR35	ENSG00000178623.7	437.96430	573.25240	-0.38840	3.22250	2.57180	HepG2	HNRNPU
GPR35	ENSG00000178623.7	839.39460	533.14520	0.65470	8.39300	7.19570	HepG2	IGF2BP1
GPR35	ENSG00000178623.7	1074.91150	1484.93890	-0.46620	3.89660	3.10890	HepG2	IGF2BP2
GPR35	ENSG00000178623.7	711.13040	1393.89990	-0.97090	4.05980	2.87110	HepG2	IGF2BP3
GPR35	ENSG00000178623.7	1271.35240	891.74380	0.51160	9.69570	7.89300	HepG2	KIF1C
GPR35	ENSG00000178623.7	472.61160	652.70160	-0.46580	3.53610	2.25330	HepG2	LARP7
GPR35	ENSG00000178623.7	428.47060	654.63720	-0.61150	4.70850	2.53380	HepG2	LSM11
GPR35	ENSG00000178623.7	809.54750	1575.71560	-0.96080	13.60140	12.19320	HepG2	MAGOH
GPR35	ENSG00000178623.7	920.84270	1584.45940	-0.78300	8.49000	7.43490	HepG2	MATR3
GPR35	ENSG00000178623.7	334.49000	562.79930	-0.75070	4.00020	2.74570	HepG2	METAP2
GPR35	ENSG00000178623.7	1036.34430	1621.72110	-0.64600	6.55350	5.59720	HepG2	NCBP2
GPR35	ENSG00000178623.7	1092.67170	752.87720	0.53730	2.22590	1.44480	HepG2	PABPC1
GPR35	ENSG00000178623.7	1015.19730	1443.96720	-0.50830	4.30930	3.42130	HepG2	PABPC4
GPR35	ENSG00000178623.7	440.55050	567.40690	-0.36510	2.76490	1.91710	HepG2	PARN
GPR35	ENSG00000178623.7	1016.87000	1554.11230	-0.61200	9.05330	8.05840	HepG2	PCBP1
GPR35	ENSG00000178623.7	416.08870	670.10140	-0.68750	2.54000	1.54600	HepG2	PCBP2
GPR35	ENSG00000178623.7	661.66650	511.29330	0.37190	3.03910	2.27000	HepG2	PPIL4
GPR35	ENSG00000178623.7	444.80200	704.35630	-0.66310	2.76080	1.54560	HepG2	PRPF6
GPR35	ENSG00000178623.7	973.24100	1581.41170	-0.70030	14.45670	13.39780	HepG2	PTBP1
GPR35	ENSG00000178623.7	1090.06560	1712.61340	-0.65180	9.54430	8.48440	HepG2	QKI
GPR35	ENSG00000178623.7	370.47600	646.38950	-0.80300	3.57130	2.77260	HepG2	RAVER1
GPR35	ENSG00000178623.7	888.19150	1554.34250	-0.80740	5.95100	4.99580	HepG2	RBM25
GPR35	ENSG00000178623.7	732.49060	1759.92250	-1.26460	44.14310	42.56850	HepG2	NELFE
GPR35	ENSG00000178623.7	922.37110	1639.19550	-0.82960	21.03900	19.61060	HepG2	RECQL
GPR35	ENSG00000178623.7	1090.60820	583.14320	0.90310	8.37680	7.28800	HepG2	RPLP0
GPR35	ENSG00000178623.7	558.28420	740.98190	-0.40840	2.62640	1.58060	HepG2	RPS5
GPR35	ENSG00000178623.7	501.42520	734.20830	-0.55020	3.03660	2.32970	HepG2	SF3A3
GPR35	ENSG00000178623.7	1219.95400	1646.37420	-0.43250	6.61940	5.76790	HepG2	SF3B4
GPR35	ENSG00000178623.7	1034.27080	737.07480	0.48860	7.94510	6.84930	HepG2	SLBP
GPR35	ENSG00000178623.7	488.60950	595.31710	-0.28500	2.11180	1.53890	HepG2	SMN1
GPR35	ENSG00000178623.7	1538.85810	1350.98030	0.18780	1.85380	1.41850	HepG2	SRFBP1
GPR35	ENSG00000178623.7	583.17720	1718.49070	-1.55910	66.07740	64.46460	HepG2	SRSF1
GPR35	ENSG00000178623.7	1102.37080	758.95460	0.53840	8.59640	7.57100	HepG2	SRSF5
GPR35	ENSG00000178623.7	812.98780	531.90060	0.61200	6.35230	5.36800	HepG2	SRSF7
GPR35	ENSG00000178623.7	1031.03930	1398.11160	-0.43940	6.83180	6.03320	HepG2	SRSF9
GPR35	ENSG00000178623.7	824.31530	1172.92840	-0.50880	8.01250	7.22700	HepG2	SSB
GPR35	ENSG00000178623.7	791.64170	1544.73640	-0.96440	23.44010	22.02990	HepG2	TAF15
GPR35	ENSG00000178623.7	354.26150	236.69620	0.58170	3.07770	2.31840	HepG2	TARDBP
GPR35	ENSG00000178623.7	998.78520	1419.30680	-0.50690	6.23090	4.98290	HepG2	TIA1
GPR35	ENSG00000178623.7	789.26500	556.97740	0.50280	2.67990	2.18590	HepG2	TIAL1
GPR35	ENSG00000178623.7	870.73930	562.00400	0.63160	9.84010	8.87630	HepG2	TRIM56
GPR35	ENSG00000178623.7	975.37140	750.98070	0.37710	3.29680	2.33650	HepG2	TUFM
GPR35	ENSG00000178623.7	860.47790	651.13100	0.40210	4.51050	3.65460	HepG2	UPF1
GPR35	ENSG00000178623.7	439.25030	628.64070	-0.51720	4.98800	4.22380	HepG2	UTP3
GPR35	ENSG00000178623.7	30.97670	8.04940	1.94410	2.73080	2.14580	K562	AQR
GPR35	ENSG00000178623.7	14.61200	0.47860	4.93190	3.53370	2.86260	K562	FXR1
GPR35	ENSG00000178623.7	15.45530	3.02250	2.35420	1.83770	1.33950	K562	HNRNPC
GPR35	ENSG00000178623.7	53.99120	11.50770	2.23000	3.79770	2.84580	K562	PUF60
GPR35	ENSG00000178623.7	11.28860	0.47740	4.56360	2.56890	1.76140	K562	RBM22
GPR35	ENSG00000178623.7	10.82880	0.49060	4.46410	2.11680	1.48890	K562	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GPR35 is not available on ENCORE database.

18 RBPs can affect the splicing of GPR35 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.22000	0.00000	0.00003	included	HepG2	NKRF
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	-0.28800	0.00000	0.00006	excluded	HepG2	DDX59
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556506	241556810	241558304	241558448	-0.38300	0.00001	0.00015	excluded	HepG2	U2AF2
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.24000	0.00007	0.04853	included	HepG2	LIN28B
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.44400	0.00000	0.00000	included	HepG2	HNRNPA1
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.23100	0.00000	0.00001	included	HepG2	MATR3
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	-0.13700	0.00000	0.00051	excluded	HepG2	DDX6
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.21300	0.00013	0.01361	included	HepG2	HNRNPL
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556506	241556810	241558304	241558448	0.14000	0.00003	0.03459	included	HepG2	PPIG
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	-0.11700	0.00027	0.00863	excluded	HepG2	SRSF1
SE	GPR35	ENSG00000178623.7	chr2	+	241545803	241546029	241544861	241544987	241555804	241555928	-0.06100	0.00183	0.04104	excluded	HepG2	SRSF1
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556506	241556810	241558304	241558448	0.35400	0.00000	0.00000	included	HepG2	IGF2BP3
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556506	241556810	241558304	241558448	0.15900	0.00000	0.00284	included	HepG2	GRSF1
SE	GPR35	ENSG00000178623.7	chr2	+	241552355	241552590	241545803	241546029	241555804	241555928	0.10100	0.00024	0.09834	included	HepG2	GRSF1
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.14900	0.00070	0.03670	included	HepG2	PCBP1
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.20500	0.00013	0.00886	included	HepG2	HNRNPU
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.25700	0.00003	0.01218	included	HepG2	XRCC6
SE	GPR35	ENSG00000178623.7	chr2	+	241567076	241567257	241558304	241558448	241569365	241570587	0.07100	0.00001	0.00106	included	HepG2	HNRNPC
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.20900	0.00007	0.02585	included	HepG2	FUS
SE	GPR35	ENSG00000178623.7	chr2	+	241557858	241557913	241556620	241556810	241558304	241558448	0.19500	0.00000	0.00066	included	HepG2	KHSRP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GPR35

General Information

Functions

Localization

Domains (AlphaFold: GPR35)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GPR35 is not avaliable on ENCORE database.

45 proteins are bound to GPR35 RNA:

eCLIP assay for GPR35 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GPR35 is not available on ENCORE database.

75 RBPs can affect the gene expression of GPR35 :

The Knockdown/knockout RNA-Seq assay for GPR35 is not available on ENCORE database.

18 RBPs can affect the splicing of GPR35 :

The Knockdown/knockout RNA-Seq assay for GPR35 is not avaliable on ENCORE database.