PTP4A1

General Information

Gene Name       : PTP4A1
Gene ID             : ENSG00000112245.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PTP4A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PTP4A1ENSG00000112245.1165.4253.9659.69ENCSR000AEF
HepG2PTP4A1ENSG00000112245.11183.25383.80283.52ENCSR985KAT
K562PTP4A1ENSG00000112245.1141.2045.4043.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PTP4A1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PTP4A1 RNA is bound by 56 proteins.  







eCLIP assay for PTP4A1 is not avaliable on ENCORE database.





56 proteins are bound to PTP4A1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr66429052064290625+3'-UTR3.4588016.92010HepG2HNRNPL
chr66429098464291023+3'-UTR3.376143.73678HepG2UPF1
chr66429238464292424+3'-UTR4.0965210.20013HepG2FUBP3
chr66429254564292591+3'-UTR7.1295317.54038K562PUM2
chr66429015664290256+3'-UTR4.060053.00956K562HNRNPA1
chr66429126464291278+3'-UTR3.8772039.37111HepG2FUBP3
chr66429120464291228+3'-UTR3.891666.37942HepG2DDX6
chr66429112864291152+3'-UTR5.7757729.20944HepG2FUBP3
chr66429118964291204+3'-UTR4.2477615.35609HepG2DDX55
chr66429102864291046+3'-UTR3.1376522.64401HepG2FUBP3
chr66429093064290953+3'-UTR3.7020525.27982HepG2FUBP3
chr66429065364290723+3'-UTR4.004197.73641K562TIA1
chr66429120764291232+3'-UTR3.889803.25538K562KHSRP
chr66429053864290649+3'-UTR3.1449910.69310HepG2IGF2BP1
chr66429120764291233+3'-UTR4.5109949.31741HepG2FUBP3
chr66429115064291191+3'-UTR4.295943.84732HepG2TIA1
chr66429021364290317+3'-UTR4.190274.04453HepG2IGF2BP3
chr66429021264290250+3'-UTR4.4120517.73679K562YBX3
chr66429037964290466+3'-UTR5.064278.11065K562IGF2BP1
chr66429123864291256+3'-UTR3.5843523.82827HepG2DDX55
chr66429118264291207+3'-UTR4.8094748.16946HepG2FUBP3
chr66429104664291103+3'-UTR3.6526672.35371HepG2FUBP3
chr66429105064291102+3'-UTR6.0915433.44877HepG2TIA1
chr66429045264290470+3'-UTR3.105176.08380K562PUM2
chr66429093264290988+3'-UTR5.370139.40829HepG2TIA1
chr66429052664290632+3'-UTR4.1782913.79054K562IGF2BP1
chr66429115264291182+3'-UTR5.4946243.18392HepG2FUBP3
chr66429104664291100+3'-UTR5.1340234.67044HepG2DDX6
chr66429123364291264+3'-UTR3.7132052.34828HepG2FUBP3
chr66429111064291180+3'-UTR3.345729.98565HepG2ZC3H11A
chr66429264764292675+3'-UTR3.187004.57972HepG2HNRNPUL1
chr66429127864291326+3'-UTR3.6869338.98105HepG2FUBP3
chr66429103564291047+3'-UTR4.489143.84520HepG2TIA1
chr66429098764291038+3'-UTR4.9766212.17851HepG2DDX6
chr66429094264290989+3'-UTR3.986883.07287K562TIA1
chr66429072864290800+3'-UTR4.8616913.83696K562IGF2BP1
chr66429100964291045+3'-UTR3.2358717.59534HepG2DDX55
chr66429086464290904+3'-UTR5.2616411.07476HepG2TIA1
chr66429226564292308+3'-UTR3.8786311.10763HepG2FUBP3
chr66429065064290723+3'-UTR3.079105.26494HepG2IGF2BP1
chr66429098864291002+3'-UTR5.8797512.96453HepG2TIA1
chr66429100864291027+3'-UTR3.6624829.54040HepG2FUBP3
chr66429064664290711+3'-UTR5.726389.40512HepG2TIA1
chr66429139064291440+3'-UTR4.341465.21253K562LIN28B
chr66429127164291324+3'-UTR3.1193815.57922HepG2DDX6
chr66429267664292774+3'-UTR4.2764815.79111K562YBX3
chr66429072064290773+3'-UTR3.126609.49425K562PUM2
chr66429100464291044+3'-UTR3.0986810.67348K562PUM2
chr66429064064290728+3'-UTR5.5746524.98933K562IGF2BP1
chr66429112964291179+3'-UTR3.5988813.30684HepG2DDX55
chr66429233364292369+3'-UTR6.0544914.32946HepG2FUBP3
chr66429274464292833+3'-UTR3.116175.59414HepG2IGF2BP3
chr66429020164290212+3'-UTR3.6637212.65277K562YBX3
chr66429103764291086+3'-UTR4.1557117.01690HepG2TIAL1
chr66429227764292324+3'-UTR4.643999.83426K562PUM2
chr66429053064290642+3'-UTR5.156816.77095HepG2IGF2BP3
chr66429095264290978+3'-UTR3.6666817.25046HepG2DDX55
chr66429322964293262+3'-UTR5.409257.79622K562PUM2
chr66429093264290952+3'-UTR3.8648311.36723HepG2DDX55
chr66429098664291009+3'-UTR3.4379616.47922HepG2DDX55
chr66429329064293360+3'-UTR3.855444.12694HepG2CSTF2
chr66429100264291035+3'-UTR5.9222713.38293HepG2TIA1
chr66429104264291096+3'-UTR3.218444.94579K562ZC3H11A
chr66429100864291037+3'-UTR4.015588.60138HepG2TIAL1
chr66429098964291038+3'-UTR3.077343.48382K562TIA1
chr66429072364290771+3'-UTR3.572663.84724HepG2IGF2BP1
chr66429066764290716+3'-UTR3.520738.16790K562FAM120A
chr66429126664291279+3'-UTR3.3362417.27581HepG2DDX55
chr66429095364290985+3'-UTR3.3827637.85821HepG2FUBP3
chr66429108664291098+3'-UTR3.075696.82854HepG2TIAL1
chr66429120464291238+3'-UTR3.5390324.73370HepG2DDX55
chr66429026164290278+3'-UTR3.844526.82724K562YBX3
chr66429095664290984+3'-UTR4.040327.22547HepG2TIAL1
chr66429098464291008+3'-UTR4.5576410.32175HepG2TIAL1
chr66429104964291104+3'-UTR3.8213610.49480K562FAM120A
chr66429138564291438+3'-UTR4.330847.16686HepG2LIN28B
chr66428660364286658+5'-UTR3.286063.75909HepG2IGF2BP1
chr66428260564282627+5'-UTR,CDS,intron-Distal,intron-Proximal5.0877511.08778HepG2AQR
chr66428644664286495+5'-UTR4.082213.01429K562IGF2BP1
chr66428236464282442+5'-UTR,intron-Distal5.0388121.79590HepG2SFPQ
chr66428631064286342+5'-UTR,CDS,intron-Proximal4.1830717.25932HepG2U2AF2
chr66428653964286606+5'-UTR3.580615.19548K562IGF2BP2
chr66428635764286405+5'-UTR,CDS4.633983.74511K562IGF2BP1
chr66428240664282518+5'-UTR,intron-Distal3.487403.95805K562DDX3X
chr66428246564282509+5'-UTR,intron-Distal4.106223.61036K562GEMIN5
chr66428655264286666+5'-UTR3.486638.46505K562IGF2BP1
chr66428261764282695+5'-UTR,CDS,intron-Distal,intron-Proximal3.6225631.77911HepG2PRPF8
chr66428253364282617+5'-UTR,CDS,intron-Distal3.231998.13862K562GEMIN5
chr66428262164282670+5'-UTR,CDS,intron-Distal,intron-Proximal4.992113.62536K562AQR
chr66428234964282406+5'-UTR,intron-Distal3.6761514.23348HepG2CSTF2T
chr66428653764286598+5'-UTR3.129597.32083HepG2IGF2BP1
chr66428673664286774+5'-UTR4.798137.81775K562IGF2BP1
chr66428678164286845+5'-UTR,CDS4.286008.55200HepG2IGF2BP3
chr66428652464286574+5'-UTR3.771286.96023HepG2RBM15
chr66428659164286647+5'-UTR3.808286.27135HepG2RBM15
chr66428235864282421+5'-UTR,intron-Distal3.605776.46681HepG2EIF3D
chr66428244964282569+5'-UTR,intron-Distal3.062593.26872K562PUM1
chr66428994864289972+CDS,intron-Proximal3.2186114.66780HepG2U2AF1
chr66428686364286948+CDS,intron-Proximal4.050986.78984HepG2AQR
chr66428832264288371+CDS,intron-Proximal5.412559.60578HepG2AQR
chr66428994664290035+CDS,intron-Proximal3.354998.04719HepG2AQR
chr66428916064289185+CDS,intron-Distal,intron-Proximal3.482954.75109K562UPF1
chr66428914464289188+CDS,intron-Distal,intron-Proximal3.5971816.33826HepG2AQR
chr66428841864288483+CDS,intron-Proximal5.222958.16909HepG2AQR
chr66428686164286921+CDS,intron-Proximal3.340876.29405HepG2PRPF8
chr66428893264288986+CDS,intron-Proximal4.784598.01338K562AQR
chr66428994664290003+CDS,intron-Proximal4.2980364.36164HepG2U2AF2
chr66428892064288963+CDS,intron-Proximal3.596614.50387HepG2AQR
chr66428840664288443+CDS,intron-Proximal6.0970135.97764HepG2PRPF8
chr66428994864290000+CDS,intron-Proximal4.9246420.24538K562U2AF2
chr66428994864290002+CDS,intron-Proximal6.1685418.19638K562U2AF1
chr66428282964282880+intron-Distal3.850634.16338HepG2RBM5
chr66428310464283151+intron-Distal3.373633.62708K562CSTF2T
chr66428271264282764+intron-Distal,intron-Proximal3.2622027.19755HepG2CSTF2T
chr66423914264239250+intron-Distal3.555508.74186HepG2HNRNPL
chr66428276364282812+intron-Distal3.286094.07268HepG2DDX52
chr66428271764282807+intron-Distal,intron-Proximal3.5578125.48188HepG2EFTUD2
chr66425269164252721+intron-Distal4.2702620.02884HepG2HNRNPL
chr66428289264282987+intron-Distal3.3612830.00462HepG2CSTF2T
chr66423406464234155+intron-Distal3.482834.92699HepG2ILF3
chr66428286664282892+intron-Distal3.8527716.34237HepG2FAM120A
chr66428037664280427+intron-Distal4.651733.84389HepG2SUGP2
chr66428298764283059+intron-Distal3.9878512.85041HepG2NKRF
chr66428275464282830+intron-Distal3.345395.89157HepG2AKAP1
chr66424435464244397+intron-Distal3.5477024.72363HepG2HNRNPL
chr66428310964283325+intron-Distal5.036496.99055K562EWSR1
chr66428294264282971+intron-Distal3.554176.99102HepG2XRN2
chr66428320864283331+intron-Distal4.418267.95555K562NONO
chr66428815964288233+intron-Distal3.069827.77178HepG2U2AF2
chr66423721164237283+intron-Distal3.296204.26114HepG2HNRNPL
chr66428325564283343+intron-Distal3.4492748.23382HepG2CSTF2T
chr66428273664282824+intron-Distal3.512459.21230HepG2NCBP2
chr66428322464283255+intron-Distal3.2990127.29980HepG2CSTF2T
chr66428273664282815+intron-Distal3.9395111.99684HepG2GTF2F1
chr66428308464283155+intron-Distal3.4661829.68816HepG2CSTF2T
chr66428276464282820+intron-Distal3.6669945.24590HepG2CSTF2T
chr66427804264278162+intron-Distal4.1499313.05314HepG2SUGP2
chr66428280364282859+intron-Distal3.119785.48995HepG2PCBP2
chr66428315564283224+intron-Distal3.7275539.56978HepG2CSTF2T
chr66423942564239446+intron-Distal5.0449426.82446HepG2PTBP1
chr66423934764239406+intron-Distal3.3719713.88329HepG2PTBP1
chr66428909064289135+intron-Distal,intron-Proximal3.906474.70265HepG2AQR
chr66428286264282917+intron-Distal3.2417218.11081HepG2NKRF
chr66428318464283260+intron-Distal4.1843111.75672HepG2DGCR8
chr66427786864277901+intron-Distal3.369673.69184HepG2SUGP2
chr66428281864282908+intron-Distal4.9940633.44259HepG2EFTUD2
chr66424718864247249+intron-Distal3.806215.22669HepG2ILF3
chr66425156764251628+intron-Distal3.277943.84024HepG2HNRNPL
chr66428315164283192+intron-Distal3.6726610.97997HepG2XRN2
chr66428272664282798+intron-Distal3.1642031.92893HepG2NKRF
chr66428817964288258+intron-Distal,intron-Proximal4.040518.99882HepG2KHSRP
chr66428283064282905+intron-Distal3.021375.37613HepG2DGCR8
chr66424431064244354+intron-Distal3.7302743.69776HepG2HNRNPL
chr66428324464283346+intron-Distal3.124707.19663K562TIA1
chr66428316564283242+intron-Distal3.138034.51006K562CSTF2T
chr66428325064283351+intron-Distal3.390977.97918HepG2HNRNPUL1
chr66428272764282814+intron-Distal3.2325728.01770HepG2FAM120A
chr66424442464244469+intron-Distal3.456617.73978HepG2AGGF1
chr66428340464283430+intron-Distal4.111749.75661HepG2XRN2
chr66425264164252691+intron-Distal3.2205911.53444HepG2HNRNPL
chr66428309664283168+intron-Distal4.2897117.47467HepG2FKBP4
chr66428299664283037+intron-Distal3.3600315.52811HepG2CSTF2T
chr66428298564283136+intron-Distal4.094415.61877K562NONO
chr66425794164258021+intron-Distal3.674467.83154HepG2HNRNPK
chr66428324264283324+intron-Distal4.997828.86792K562CSTF2T
chr66424925364249334+intron-Distal3.769475.59440HepG2HNRNPK
chr66428271664282865+intron-Distal,intron-Proximal3.6158431.83449HepG2FASTKD2
chr66428815664288259+intron-Distal,intron-Proximal4.106593.66668K562KHSRP
chr66428319264283252+intron-Distal3.9003217.63276HepG2XRN2
chr66428276364282916+intron-Distal3.381276.05650K562XRN2
chr66428302264283053+intron-Distal4.4881011.44588HepG2XRN2
chr66425276964252815+intron-Distal3.253099.31890HepG2HNRNPL
chr66428273864282829+intron-Distal3.0977617.43481HepG2XRN2
chr66427998664280046+intron-Distal3.197604.04407HepG2ILF3
chr66427147564271547+intron-Distal4.1716410.24078HepG2HNRNPL
chr66428306864283148+intron-Distal3.7093810.31515HepG2SFPQ
chr66428286564282919+intron-Distal3.254997.51139HepG2FASTKD2
chr66428283164282905+intron-Distal4.2615915.70228HepG2SFPQ
chr66428926264289322+intron-Distal,intron-Proximal4.156784.23960HepG2TIAL1
chr66428318264283245+intron-Distal4.2865712.88831HepG2FKBP4
chr66428273364282790+intron-Distal3.047469.16441HepG2PCBP2
chr66428273864282793+intron-Distal3.3119010.03338HepG2FKBP4
chr66428271364282862+intron-Distal,intron-Proximal3.8459035.37323HepG2PRPF4
chr66428339064283445+intron-Distal3.7414524.07166HepG2CSTF2T
chr66428317464283246+intron-Distal3.553218.61429HepG2GTF2F1
chr66428272864282848+intron-Distal4.598205.63746K562EWSR1
chr66428318764283238+intron-Distal3.349509.76968HepG2SFPQ
chr66424440064244463+intron-Distal3.6156420.80992HepG2HNRNPL
chr66428273964282850+intron-Distal3.088896.74654K562CSTF2T
chr66423926264239337+intron-Distal3.066484.63615HepG2HNRNPL
chr66428523564285268+intron-Distal4.734965.72876HepG2HNRNPUL1
chr66428322664283326+intron-Distal3.7763814.18614HepG2PRPF4
chr66428324664283340+intron-Distal3.707709.47969HepG2GTF2F1
chr66428316164283226+intron-Distal3.519658.84351HepG2PRPF4
chr66428353464283557+intron-Distal,intron-Proximal3.410324.52495HepG2XRN2
chr66425272164252756+intron-Distal4.0643220.41805HepG2HNRNPL
chr66425275664252769+intron-Distal3.263939.23913HepG2HNRNPL
chr66424437564244475+intron-Distal3.474117.79439HepG2GTF2F1
chr66428317764283250+intron-Distal4.007128.96361HepG2HNRNPUL1
chr66428281464282866+intron-Distal4.3044420.62382HepG2FAM120A
chr66428351264283568+intron-Distal,intron-Proximal3.689068.22941HepG2SFPQ
chr66428306864283159+intron-Distal3.356567.59416HepG2SLTM
chr66423941264239563+intron-Distal3.3573220.57141HepG2QKI
chr66428031464280376+intron-Distal3.699313.91859HepG2SUGP2
chr66428306764283150+intron-Distal3.7192825.93622HepG2NKRF
chr66426136864261445+intron-Distal3.300716.73159HepG2U2AF2
chr66427780264277844+intron-Distal5.012976.32237HepG2SUGP2
chr66428326064283348+intron-Distal3.651159.72134HepG2DGCR8
chr66428286964282892+intron-Distal3.7763124.97118HepG2CSTF2T
chr66428282064282869+intron-Distal4.8149233.89367HepG2CSTF2T
chr66424585464245955+intron-Distal4.5890317.43941HepG2ILF3
chr66428262764282674+intron-Distal,intron-Proximal6.3209114.31862HepG2AQR
chr66428299064283050+intron-Distal3.0198611.14905HepG2FAM120A
chr66423940664239425+intron-Distal4.0328317.07046HepG2PTBP1
chr66428908964289135+intron-Distal,intron-Proximal3.4967110.20257HepG2BUD13
chr66428326064283301+intron-Distal4.262486.61810HepG2FKBP4
chr66427500064275052+intron-Distal3.732793.37208HepG2ILF3
chr66428521964285295+intron-Distal3.523177.74116HepG2KHSRP
chr66425419064254271+intron-Distal3.4368011.42947HepG2HNRNPL
chr66428308964283151+intron-Distal3.8876714.29475HepG2XRN2
chr66428310964283154+intron-Distal4.047896.93029HepG2GTF2F1
chr66428701464287139+intron-Distal3.323163.48890K562KHSRP
chr66428293864282983+intron-Distal3.4099310.30087HepG2NKRF
chr66428287664282938+intron-Distal3.4765714.06110HepG2XRN2
chr66425991664259996+intron-Distal4.439563.16986HepG2QKI
chr66428282664282906+intron-Distal3.089467.42290HepG2HNRNPUL1
chr66428279864282862+intron-Distal3.5724528.38414HepG2NKRF
chr66428272764282838+intron-Distal3.0482811.01054HepG2SUPV3L1
chr66428263664282678+intron-Distal,intron-Proximal3.488107.88147HepG2XRN2
chr66428282664282872+intron-Distal3.964938.30622HepG2GTF2F1
chr66424426764244310+intron-Distal3.4319422.57144HepG2HNRNPL
chr66428286264282920+intron-Distal3.337265.40117HepG2PRPF4
chr66425175164251892+intron-Distal3.3070911.62213HepG2HNRNPL
chr66425992464260013+intron-Distal3.288605.90314HepG2KHSRP
chr66427753464277633+intron-Distal3.8537712.99693HepG2SUGP2
chr66423944664239537+intron-Distal5.4153948.12529HepG2PTBP1
chr66428301064283055+intron-Distal3.145994.57682HepG2GTF2F1
chr66423451864234596+intron-Distal3.225374.93032HepG2ILF3
chr66427314864273235+intron-Distal3.143433.47356HepG2HNRNPK
chr66428614064286232+intron-Distal3.846073.24603K562KHSRP
chr66423800264238064+intron-Proximal3.053893.70461HepG2TIA1
chr66423766464237750+intron-Proximal3.601226.83703HepG2AQR
chr66423790164238013+intron-Proximal3.863035.79747HepG2SRSF9
chr66428844364288483+intron-Proximal6.5291535.49077HepG2PRPF8
chr66428844464288483+intron-Proximal5.303735.24235HepG2EFTUD2
chr66423799964238073+intron-Proximal4.148877.94575HepG2TIAL1
chr66428628864286331+intron-Proximal6.4194512.27549HepG2SF3A3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PTP4A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PTP4A1 is not available on ENCORE database.

  • 117 RBPs can affect the levels of PTP4A1.  








The Knockdown/knockout RNA-Seq assay for PTP4A1 is not available on ENCORE database.





117 RBPs can affect the gene expression of PTP4A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PTP4A1ENSG00000112245.611724.682508389.737700.482806.958405.34180HepG2AATF
PTP4A1ENSG00000112245.618143.6539013573.130400.418603.695102.61270HepG2ABCF1
PTP4A1ENSG00000112245.612431.200409934.576600.323308.693807.73980HepG2ACO1
PTP4A1ENSG00000112245.613552.9533010633.968500.349803.353002.26250HepG2ADAR
PTP4A1ENSG00000112245.611964.684509981.736900.261304.398603.44660HepG2AKAP8L
PTP4A1ENSG00000112245.613942.6423016660.36340-0.256903.435702.68540HepG2AUH
PTP4A1ENSG00000112245.67500.3591011873.47780-0.662707.396405.82290HepG2BCCIP
PTP4A1ENSG00000112245.67876.5429010317.69960-0.389502.984602.04920HepG2BCLAF1
PTP4A1ENSG00000112245.619146.6103013920.768800.459807.187806.02050HepG2CALR
PTP4A1ENSG00000112245.68755.4861017575.95370-1.0053010.598609.13160HepG2CNOT7
PTP4A1ENSG00000112245.610569.793407334.988600.527007.957606.29020HepG2CSTF2
PTP4A1ENSG00000112245.612442.2429016106.75130-0.372408.248007.07180HepG2DAZAP1
PTP4A1ENSG00000112245.611466.743009188.328100.319508.543107.22110HepG2DDX19B
PTP4A1ENSG00000112245.613517.542609058.920800.5773011.835409.99910HepG2DDX24
PTP4A1ENSG00000112245.68842.9506011673.79500-0.400702.984402.18670HepG2DDX55
PTP4A1ENSG00000112245.619379.9820012885.654500.588706.435005.52320HepG2DDX6
PTP4A1ENSG00000112245.68151.9057010327.83890-0.341303.813502.67170HepG2DHX30
PTP4A1ENSG00000112245.616208.200109504.848500.7699011.6590010.46840HepG2DKC1
PTP4A1ENSG00000112245.67423.8616010708.09070-0.5285014.2978012.79660HepG2DNAJC21
PTP4A1ENSG00000112245.69093.6933010613.07880-0.222904.765003.94660HepG2DNAJC2
PTP4A1ENSG00000112245.614296.8210010427.547700.455205.631704.35280HepG2EEF2
PTP4A1ENSG00000112245.69682.0982012388.52880-0.355603.146902.51610HepG2EIF2S1
PTP4A1ENSG00000112245.611327.916708465.304500.420104.569203.42920HepG2EIF3D
PTP4A1ENSG00000112245.613246.9551010115.434600.389003.468001.49320HepG2EIF3H
PTP4A1ENSG00000112245.620113.4822013691.378700.554805.856904.92790HepG2EIF4A3
PTP4A1ENSG00000112245.614587.6834011759.997800.310803.417202.20870HepG2ESF1
PTP4A1ENSG00000112245.612685.590909708.374000.385803.215202.31600HepG2EWSR1
PTP4A1ENSG00000112245.66266.227107564.97070-0.271702.645601.50430HepG2FAM120A
PTP4A1ENSG00000112245.69127.0496012813.80900-0.489504.881904.00940HepG2G3BP1
PTP4A1ENSG00000112245.616497.8959013602.257000.278302.252401.45210HepG2G3BP2
PTP4A1ENSG00000112245.611112.093907537.396600.559907.509106.05850HepG2GEMIN5
PTP4A1ENSG00000112245.611519.614709485.030400.280303.615002.50970HepG2HDGF
PTP4A1ENSG00000112245.613890.8924010810.672000.361601.979301.42130HepG2HNRNPA1
PTP4A1ENSG00000112245.615338.7951012972.919900.241602.024301.42100HepG2HNRNPK
PTP4A1ENSG00000112245.611991.3912014672.71380-0.291104.068503.26350HepG2HNRNPL
PTP4A1ENSG00000112245.66937.219809458.76400-0.447305.150903.89630HepG2HNRNPM
PTP4A1ENSG00000112245.67671.6623011945.23350-0.6388027.1820025.44350HepG2HNRNPU
PTP4A1ENSG00000112245.619525.1771013025.295500.583907.857506.77990HepG2IGF2BP2
PTP4A1ENSG00000112245.611041.3678012201.68650-0.144202.487801.78880HepG2ILF2
PTP4A1ENSG00000112245.612794.4076017133.86640-0.421302.592701.32460HepG2ILF3
PTP4A1ENSG00000112245.612783.4757016743.23210-0.389302.786101.59160HepG2KHDRBS1
PTP4A1ENSG00000112245.628192.2629020305.247500.473303.875302.88970HepG2LARP4
PTP4A1ENSG00000112245.618544.0838013817.031500.424404.230503.42240HepG2MAGOH
PTP4A1ENSG00000112245.612506.759809705.083400.365804.360302.57170HepG2NIP7
PTP4A1ENSG00000112245.610568.0403013141.86610-0.314502.033201.38690HepG2NSUN2
PTP4A1ENSG00000112245.67326.7400011823.92540-0.6905029.0641026.89450HepG2PARN
PTP4A1ENSG00000112245.615039.1357012136.023900.309306.386505.52370HepG2PCBP1
PTP4A1ENSG00000112245.617824.6017011972.291400.574104.238902.97050HepG2PCBP2
PTP4A1ENSG00000112245.63037.3164010397.21560-1.77530160.24800156.65870HepG2PRPF4
PTP4A1ENSG00000112245.618229.3812012586.211000.534303.654102.26600HepG2PRPF6
PTP4A1ENSG00000112245.613811.4984012348.824400.161402.146001.65250HepG2PTBP1
PTP4A1ENSG00000112245.612447.3930015245.36520-0.292503.489202.82980HepG2PUF60
PTP4A1ENSG00000112245.611193.2421010119.096000.145402.164201.60290HepG2PUS1
PTP4A1ENSG00000112245.65784.6397013374.15370-1.2091061.3158059.12130HepG2QKI
PTP4A1ENSG00000112245.624222.0442011554.683101.0677010.482109.17460HepG2RAVER1
PTP4A1ENSG00000112245.616284.1814013599.600600.259803.154202.24430HepG2RBM15
PTP4A1ENSG00000112245.617300.1194012137.876900.511209.226508.04950HepG2RBM25
PTP4A1ENSG00000112245.622510.0555013743.084000.7118034.6755033.21690HepG2NELFE
PTP4A1ENSG00000112245.618623.5696012799.764100.5409020.9858019.55940HepG2RECQL
PTP4A1ENSG00000112245.622376.4282014959.436100.580805.862004.92080HepG2RPLP0
PTP4A1ENSG00000112245.610217.102208236.697900.310703.825803.11360HepG2RPS19
PTP4A1ENSG00000112245.610802.323308909.976200.277702.130401.43270HepG2RRP9
PTP4A1ENSG00000112245.66449.6140010637.84790-0.7219040.6237038.59990HepG2SAFB2
PTP4A1ENSG00000112245.610386.5393016615.87090-0.677807.368705.29580HepG2SART3
PTP4A1ENSG00000112245.611023.9559016764.27470-0.604704.229602.33000HepG2SBDS
PTP4A1ENSG00000112245.629183.4483012463.158501.2274019.7669017.91770HepG2SF3A3
PTP4A1ENSG00000112245.611447.0158014671.60720-0.358102.457901.79040HepG2SF3B1
PTP4A1ENSG00000112245.621274.5089012856.780700.7265036.8622035.16130HepG2SF3B4
PTP4A1ENSG00000112245.611204.6736014616.39650-0.383506.765805.74690HepG2SLBP
PTP4A1ENSG00000112245.69699.3704012405.67860-0.3550014.2444012.96180HepG2SMN1
PTP4A1ENSG00000112245.620176.5317018057.279000.160002.689102.19200HepG2SRFBP1
PTP4A1ENSG00000112245.622583.5998013419.670800.7508045.2822043.87650HepG2SRSF1
PTP4A1ENSG00000112245.617440.8882010917.595700.6757030.4849029.03060HepG2SRSF9
PTP4A1ENSG00000112245.625861.8637015678.536000.7219039.8397038.43050HepG2SSB
PTP4A1ENSG00000112245.616591.4500012619.034800.394703.324201.92470HepG2SSRP1
PTP4A1ENSG00000112245.616061.9483010797.816300.572804.456902.91920HepG2SUB1
PTP4A1ENSG00000112245.615437.1837017118.67600-0.149202.110401.55320HepG2SUCLG1
PTP4A1ENSG00000112245.610797.694909257.876300.221902.500601.60360HepG2SUPT6H
PTP4A1ENSG00000112245.614484.6645011621.558200.317602.745702.07100HepG2SUPV3L1
PTP4A1ENSG00000112245.622372.3696012062.054800.8911039.4615037.66720HepG2TAF15
PTP4A1ENSG00000112245.68958.9060014444.11300-0.689106.765505.69920HepG2TARDBP
PTP4A1ENSG00000112245.69965.0285011607.59380-0.220102.403301.93150HepG2TIAL1
PTP4A1ENSG00000112245.67085.1340011710.74810-0.7250033.4308031.73860HepG2TRIM56
PTP4A1ENSG00000112245.614140.3678011726.667900.269901.916101.38290HepG2U2AF1
PTP4A1ENSG00000112245.69846.8857011052.89030-0.166702.523501.85150HepG2UPF1
PTP4A1ENSG00000112245.614345.8345010671.170800.4268014.5177013.30670HepG2UTP3
PTP4A1ENSG00000112245.68694.0118015804.37040-0.862209.770807.74210HepG2XPO5
PTP4A1ENSG00000112245.618163.0570011360.325700.676906.060104.20370HepG2XRCC5
PTP4A1ENSG00000112245.616578.8200012705.983900.383702.273401.31580HepG2XRCC6
PTP4A1ENSG00000112245.69091.6122011440.13520-0.331502.550601.85300HepG2XRN2
PTP4A1ENSG00000112245.615498.9211010260.607500.5950032.5508030.73340HepG2ZC3H8
PTP4A1ENSG00000112245.615873.8592012156.100000.3849016.1054015.05860HepG2ZNF622
PTP4A1ENSG00000112245.62608.991901783.694100.548503.806702.39520K562AARS
PTP4A1ENSG00000112245.63239.289604043.43290-0.319902.903601.64350K562ABCF1
PTP4A1ENSG00000112245.64369.054803463.960800.334806.480405.66410K562AGGF1
PTP4A1ENSG00000112245.64504.390903604.384600.321503.136302.43960K562AKAP8L
PTP4A1ENSG00000112245.61570.425401851.00740-0.237202.699401.75040K562BCLAF1
PTP4A1ENSG00000112245.62417.154803387.32410-0.486802.684701.64360K562CNOT7
PTP4A1ENSG00000112245.61774.824602598.63320-0.550108.508607.11660K562CPSF6
PTP4A1ENSG00000112245.61823.597302223.91350-0.286303.393902.05060K562DDX21
PTP4A1ENSG00000112245.61247.725601668.34980-0.419103.428502.40760K562EFTUD2
PTP4A1ENSG00000112245.61673.256102333.16690-0.479608.585807.42410K562EIF2S2
PTP4A1ENSG00000112245.61614.350502018.38680-0.322203.958603.01490K562EIF3G
PTP4A1ENSG00000112245.61613.738602241.17980-0.473904.469303.28150K562FTO
PTP4A1ENSG00000112245.62444.690302047.777500.255502.991602.36570K562FXR1
PTP4A1ENSG00000112245.63925.670102195.001400.838603.672202.83210K562G3BP2
PTP4A1ENSG00000112245.62010.780602481.01940-0.303202.700601.91540K562GPKOW
PTP4A1ENSG00000112245.61398.546901742.77140-0.317502.671601.55330K562HNRNPF
PTP4A1ENSG00000112245.62674.239503326.14010-0.314703.192702.04820K562HNRNPL
PTP4A1ENSG00000112245.63233.066502619.627200.303402.987102.11340K562MAGOH
PTP4A1ENSG00000112245.64571.380003661.624700.320002.642501.59980K562MAK16
PTP4A1ENSG00000112245.62119.997402614.44550-0.302402.920501.97020K562MATR3
PTP4A1ENSG00000112245.61795.219902421.76690-0.431904.998903.80240K562METAP2
PTP4A1ENSG00000112245.64672.040503003.620700.637303.903202.80590K562NAA15
PTP4A1ENSG00000112245.62405.088701966.259900.290502.974801.70250K562NCBP2
PTP4A1ENSG00000112245.62007.766302628.73140-0.3888010.206008.89610K562NSUN2
PTP4A1ENSG00000112245.62593.037103299.30480-0.347503.189302.29890K562PPIG
PTP4A1ENSG00000112245.65841.822604111.668200.506607.105405.79460K562PUF60
PTP4A1ENSG00000112245.65497.227104373.152000.329904.493503.10610K562PUM1
PTP4A1ENSG00000112245.66515.051203574.730100.8658017.4807016.15730K562PUS1
PTP4A1ENSG00000112245.65759.910803482.895400.7257016.6369015.16810K562RBM15
PTP4A1ENSG00000112245.61984.308002440.89160-0.298802.440701.65430K562RBM22
PTP4A1ENSG00000112245.62051.286101566.790500.388603.996402.68610K562SAFB
PTP4A1ENSG00000112245.62201.661301619.809900.442704.237102.41200K562SDAD1
PTP4A1ENSG00000112245.61913.080502494.91600-0.383104.387803.50170K562SRSF1
PTP4A1ENSG00000112245.61628.779101984.55720-0.285003.241901.96830K562SRSF7
PTP4A1ENSG00000112245.62528.285002081.963000.280103.153901.76700K562SSB
PTP4A1ENSG00000112245.62396.544201763.629000.442306.135304.90470K562SYNCRIP
PTP4A1ENSG00000112245.61570.846602525.22880-0.684909.067707.68670K562TARDBP
PTP4A1ENSG00000112245.61290.562501682.92090-0.383002.913401.95160K562TIAL1
PTP4A1ENSG00000112245.63124.679102127.789100.554305.350103.72790K562U2AF1
PTP4A1ENSG00000112245.62877.031202197.503900.388605.084604.00080K562U2AF2
PTP4A1ENSG00000112245.62153.033602787.29260-0.372506.712705.64700K562UPF1
PTP4A1ENSG00000112245.62959.135802304.989900.360303.999301.96550K562UPF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PTP4A1 is not available on ENCORE database.





18 RBPs can affect the splicing of PTP4A1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPTP4A1ENSG00000112245.6chr6+642422416424243564237911642379896428634064286487-0.197000.000030.00089excludedHepG2U2AF1
SEPTP4A1ENSG00000112245.6chr6+642602046426039864237723642379896428634064286487-0.233000.000080.00314excludedHepG2HNRNPK
SEPTP4A1ENSG00000112245.6chr6+6426020964260398642422416424243564286340642864870.155000.000000.00000includedHepG2U2AF2
SEPTP4A1ENSG00000112245.6chr6+642422416424243564237723642379896428634064286487-0.290000.000000.00000excludedHepG2U2AF2
SEPTP4A1ENSG00000112245.6chr6+642422416424243564237911642379896428634064286487-0.214000.000020.01790excludedHepG2LIN28B
SEPTP4A1ENSG00000112245.6chr6+6426024164260398642422416424243564286340642864870.166000.000060.01127includedHepG2PCBP2
SEPTP4A1ENSG00000112245.6chr6+642423136424243564237723642379896428634064286487-0.157000.000050.01079excludedHepG2PCBP2
SEPTP4A1ENSG00000112245.6chr6+642422416424245064237723642379896426020464260398-0.334000.000000.00310excludedHepG2NIP7
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602096426039864237723642379896428634064286487-0.179000.000000.000222includedHepG2U2AF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602416426039864237723642379896428634064286487-0.179000.000000.000222includedHepG2U2AF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.153000.000010.000392includedHepG2U2AF1
MXEPTP4A1ENSG00000112245.6chr6+6424231364242435642602096426039864237723642379896428634064286487-0.099000.000280.007682includedHepG2U2AF1
MXEPTP4A1ENSG00000112245.6chr6+6424231364242435642602416426039864237723642379896428634064286487-0.099000.000280.007682includedHepG2U2AF1
MXEPTP4A1ENSG00000112245.6chr6+6424231364242435642602046426039864237723642379896428634064286487-0.083000.000510.012352includedHepG2U2AF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.121000.000020.001082includedHepG2FTO
MXEPTP4A1ENSG00000112245.6chr6+6423772364237989642602046426039864231665642317316428634064286487-0.163000.000150.025412includedHepG2FUS
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.161000.000150.025412includedHepG2FUS
MXEPTP4A1ENSG00000112245.6chr6+6423772364237826642602046426039864231665642317316428634064286487-0.171000.000220.035552includedHepG2FUS
MXEPTP4A1ENSG00000112245.6chr6+6423772364237989642602046426039864231665642317316428634064286487-0.101000.001650.056482includedHepG2PTBP1
MXEPTP4A1ENSG00000112245.6chr6+6423772364237826642602046426039864231665642317316428634064286487-0.131000.000220.011732includedHepG2PTBP1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.201000.000000.000002includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602096426039864237723642379896428634064286487-0.234000.000000.000002includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602336426039864237723642379896428634064286487-0.234000.000000.000002includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242450642602046426039864237723642379896428634064286487-0.163000.000000.000002includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242450642602096426039864237723642379896428634064286487-0.196000.000000.000002includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242450642602336426039864237723642379896428634064286487-0.196000.000000.000002includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424225264242435642602046426039864237723642379896428634064286487-0.083000.000000.000112includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424225264242435642602096426039864237723642379896428634064286487-0.103000.000000.000162includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424225264242435642602336426039864237723642379896428634064286487-0.104000.000000.000152includedHepG2SRSF1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.148000.000070.057032includedHepG2LIN28B
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602416426039864237723642379896428634064286487-0.097000.003510.037372includedHepG2SFPQ
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.102000.001490.020562includedHepG2SFPQ
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.169000.000450.077512includedHepG2LARP7
MXEPTP4A1ENSG00000112245.6chr6+6423772364237989642602046426039864231665642317316428634064286487-0.147000.000680.050112includedHepG2NOL12
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.139000.001100.066112includedHepG2NOL12
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602416426039864237723642379896428634064286487-0.135000.000000.000002includedHepG2U2AF2
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.138000.000000.000002includedHepG2U2AF2
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.108000.003110.085562includedHepG2SF3B4
MXEPTP4A1ENSG00000112245.6chr6+64242241642424356426020964260398642377236423798964286340642864870.151000.000990.063201includedHepG2SRSF7
MXEPTP4A1ENSG00000112245.6chr6+64242241642424356426023364260398642377236423798964286340642864870.151000.000920.060571includedHepG2SRSF7
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602416426039864237723642379896428634064286487-0.132000.001120.090482includedHepG2DDX59
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.126000.000800.069612includedHepG2DDX59
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.179000.001300.079642includedHepG2QKI
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.153000.000170.009422includedHepG2TIAL1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602096426039864237723642379896428634064286487-0.173000.000320.015342includedHepG2TIAL1
MXEPTP4A1ENSG00000112245.6chr6+6424231364242435642602046426039864237723642379896428634064286487-0.093000.000450.018872includedHepG2TIAL1
MXEPTP4A1ENSG00000112245.6chr6+6424231364242435642602096426039864237723642379896428634064286487-0.109000.000490.019872includedHepG2TIAL1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242450642602046426039864237723642379896428634064286487-0.107000.001810.046842includedHepG2TIAL1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242450642602096426039864237723642379896428634064286487-0.122000.001960.049542includedHepG2TIAL1
MXEPTP4A1ENSG00000112245.6chr6+6424224164242435642602046426039864237723642379896428634064286487-0.102000.000630.060812includedHepG2PCBP2
MXEPTP4A1ENSG00000112245.6chr6+6424231364242435642602046426039864237723642379896428634064286487-0.097000.000010.001672includedHepG2PCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PTP4A1 is not avaliable on ENCORE database.