ACOT9

General Information

Gene Name       : ACOT9
Gene ID             : ENSG00000123130.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ACOT9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACOT9ENSG00000123130.1614.7714.9714.87ENCSR000AEF
HepG2ACOT9ENSG00000123130.1621.1126.6523.88ENCSR985KAT
K562ACOT9ENSG00000123130.1633.4930.4531.97ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACOT9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACOT9 RNA is bound by 11 proteins.  







eCLIP assay for ACOT9 is not avaliable on ENCORE database.





11 proteins are bound to ACOT9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX2372362423723687-3'-UTR,CDS,intron-Distal,intron-Proximal4.591934.08604HepG2PPIG
chrX2373992323740014-3'-UTR,CDS,intron-Distal,intron-Proximal4.658654.22101K562PRPF8
chrX2372388223723959-3'-UTR,CDS,intron-Distal,intron-Proximal3.657767.40563HepG2PPIG
chrX2372188023721979-3'-UTR,intron-Distal4.703785.42420K562NOLC1
chrX2372187723721968-3'-UTR,intron-Distal5.1349811.22320HepG2SUB1
chrX2373996323740058-3'-UTR,CDS,intron-Distal,intron-Proximal5.511388.38577HepG2PRPF8
chrX2373999823740100-3'-UTR,CDS,intron-Distal4.334648.98365HepG2PPIG
chrX2372395923723976-3'-UTR,CDS,intron-Distal,intron-Proximal4.120223.82843HepG2PPIG
chrX2372474323724863-3'-UTR,CDS,intron-Distal,intron-Proximal3.711329.51790HepG2PPIG
chrX2372599423726063-3'-UTR,CDS,intron-Distal,intron-Proximal4.210354.21087HepG2GRWD1
chrX2374864123748679-5'-UTR,CDS,intron-Distal,intron-Proximal4.267183.79199HepG2PPIG
chrX2374900023749077-5'-UTR,CDS,intron-Distal3.988615.30520K562UCHL5
chrX2376125323761380-5'-UTR,CDS,intron-Distal,intron-Proximal3.7009012.79836K562DDX3X
chrX2376126523761292-5'-UTR,intron-Distal4.369374.31428K562YBX3
chrX2376116423761262-5'-UTR,CDS,intron-Distal3.526553.98203HepG2PRPF8
chrX2374899523749051-5'-UTR,CDS,intron-Distal4.313734.38106HepG2PPIG
chrX2375224123752399-intron-Distal,intron-Proximal5.406009.03229HepG2QKI
chrX2375414623754200-intron-Distal,intron-Proximal4.248424.32536HepG2SF3B4
chrX2376028923760396-intron-Distal4.343323.42734K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACOT9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACOT9 is not available on ENCORE database.

  • 81 RBPs can affect the levels of ACOT9.  








The Knockdown/knockout RNA-Seq assay for ACOT9 is not available on ENCORE database.





81 RBPs can affect the gene expression of ACOT9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACOT9ENSG00000123130.121068.89580598.766000.8360018.6453017.36710HepG2ACO1
ACOT9ENSG00000123130.12309.74330429.79580-0.472602.660701.68150HepG2ADAR
ACOT9ENSG00000123130.121225.02360506.203201.2749017.2238016.01230HepG2AKAP1
ACOT9ENSG00000123130.12780.46860601.606100.375403.593202.73250HepG2AKAP8L
ACOT9ENSG00000123130.12556.23280418.822500.409302.172201.47210HepG2ASCC1
ACOT9ENSG00000123130.121113.94850902.671100.303303.259302.52380HepG2AUH
ACOT9ENSG00000123130.12662.86160476.868600.475002.960401.98740HepG2BCCIP
ACOT9ENSG00000123130.12664.53190494.398200.426603.232502.40490HepG2CALR
ACOT9ENSG00000123130.121335.21470774.666900.7853016.7351015.42120HepG2CELF1
ACOT9ENSG00000123130.12697.99280832.90290-0.254902.079601.42360HepG2DAZAP1
ACOT9ENSG00000123130.12760.71980484.865400.649705.143304.31420HepG2DDX3X
ACOT9ENSG00000123130.12848.67870468.836900.856008.292207.03410HepG2DDX55
ACOT9ENSG00000123130.12659.52730416.601100.662704.658803.87590HepG2DDX6
ACOT9ENSG00000123130.12600.56920400.397700.584803.898103.20140HepG2EIF2S1
ACOT9ENSG00000123130.12449.26950303.069900.567803.300602.31980HepG2EIF3D
ACOT9ENSG00000123130.12888.93400430.864001.044709.417808.18710HepG2EIF4B
ACOT9ENSG00000123130.12602.45680787.18180-0.385802.459001.68940HepG2EIF4G2
ACOT9ENSG00000123130.121226.738501036.370000.243202.434301.86380HepG2ETF1
ACOT9ENSG00000123130.12906.35550585.130200.631207.180005.83840HepG2EWSR1
ACOT9ENSG00000123130.12577.06720430.987800.421002.767501.62320HepG2FASTKD2
ACOT9ENSG00000123130.12976.63320540.136900.854407.923906.69560HepG2FIP1L1
ACOT9ENSG00000123130.12372.55850268.438800.472802.618301.85300HepG2FUBP3
ACOT9ENSG00000123130.12689.98920446.539200.627704.754003.86310HepG2FXR1
ACOT9ENSG00000123130.12745.73020414.160500.848408.088406.98310HepG2G3BP1
ACOT9ENSG00000123130.12590.34950439.776100.424702.390201.56400HepG2G3BP2
ACOT9ENSG00000123130.12732.69190482.454200.602702.861301.46330HepG2HLTF
ACOT9ENSG00000123130.12918.63480765.487800.263002.284601.42700HepG2HNRNPA2B1
ACOT9ENSG00000123130.12554.21150670.43670-0.274702.134601.49820HepG2HNRNPF
ACOT9ENSG00000123130.12715.23170419.538700.769507.340306.24310HepG2HNRNPK
ACOT9ENSG00000123130.12488.41010660.18440-0.434803.534002.72330HepG2IGF2BP1
ACOT9ENSG00000123130.12822.13400420.960200.9656010.848909.60490HepG2IGF2BP2
ACOT9ENSG00000123130.121017.93110395.153401.365107.545205.97640HepG2IGF2BP3
ACOT9ENSG00000123130.12615.95100423.460600.540502.999701.94980HepG2KHSRP
ACOT9ENSG00000123130.12668.73040446.695700.582004.061603.26830HepG2MAGOH
ACOT9ENSG00000123130.12661.44070449.174200.558203.476002.77570HepG2MATR3
ACOT9ENSG00000123130.12524.19820317.178800.724703.420002.25240HepG2METAP2
ACOT9ENSG00000123130.12659.97090437.048300.594504.890403.83490HepG2MSI2
ACOT9ENSG00000123130.12681.02020459.737100.566803.835803.09560HepG2NCBP2
ACOT9ENSG00000123130.12562.62680409.344900.458802.651401.94370HepG2PABPC4
ACOT9ENSG00000123130.12721.91190419.286400.7838011.6913010.58230HepG2PCBP1
ACOT9ENSG00000123130.12720.34420426.636300.755605.698904.97070HepG2PTBP1
ACOT9ENSG00000123130.12534.24620788.41620-0.561505.094804.31590HepG2PUF60
ACOT9ENSG00000123130.121109.01860459.921601.269709.080807.85130HepG2RAVER1
ACOT9ENSG00000123130.12784.80010592.906900.404403.220102.30250HepG2RBM15
ACOT9ENSG00000123130.121661.37630866.217100.9395023.3308022.12190HepG2RBM22
ACOT9ENSG00000123130.12747.26770419.350700.8334010.183808.95080HepG2RBM25
ACOT9ENSG00000123130.12707.56780474.808000.575406.201405.44570HepG2NELFE
ACOT9ENSG00000123130.12599.86640442.214200.439803.671402.97470HepG2RECQL
ACOT9ENSG00000123130.12418.11160294.917000.503503.094602.44960HepG2RPS19
ACOT9ENSG00000123130.12527.90390357.907900.560603.599702.71810HepG2RRP9
ACOT9ENSG00000123130.12407.92630295.968900.462802.489201.59570HepG2SERBP1
ACOT9ENSG00000123130.12723.30920444.189300.703309.053908.07800HepG2SF3B4
ACOT9ENSG00000123130.12601.52190756.00420-0.329802.957002.23380HepG2SLBP
ACOT9ENSG00000123130.12646.63650501.373100.367003.450602.74490HepG2SMN1
ACOT9ENSG00000123130.121832.02820978.366700.9049029.5570028.37020HepG2SRFBP1
ACOT9ENSG00000123130.12842.94090463.635100.8623014.2622013.36780HepG2SRSF1
ACOT9ENSG00000123130.12598.27940377.189800.665408.301407.43710HepG2SRSF9
ACOT9ENSG00000123130.12666.03250849.46500-0.351003.395802.84070HepG2SSB
ACOT9ENSG00000123130.12687.28360466.757700.558103.973503.18520HepG2SUPV3L1
ACOT9ENSG00000123130.12702.63710416.726700.753609.685908.73910HepG2TAF15
ACOT9ENSG00000123130.12495.58600312.874300.663505.203703.90060HepG2TFIP11
ACOT9ENSG00000123130.12547.34830382.922100.515304.106303.09450HepG2TIA1
ACOT9ENSG00000123130.12364.27840469.08880-0.364802.244501.78460HepG2TIAL1
ACOT9ENSG00000123130.121090.29940815.345800.419102.686701.86190HepG2UBE2L3
ACOT9ENSG00000123130.12510.22520275.753900.887708.584407.24490HepG2UCHL5
ACOT9ENSG00000123130.12573.87350469.103500.290702.035601.42050HepG2UPF1
ACOT9ENSG00000123130.12845.54250515.924000.7126013.0347012.06930HepG2ZNF622
ACOT9ENSG00000123130.12653.21830475.757900.457203.213601.92750K562AARS
ACOT9ENSG00000123130.12838.521201086.93980-0.374402.704901.49970K562ABCF1
ACOT9ENSG00000123130.12696.540201455.28970-1.0630018.1808016.84290K562AQR
ACOT9ENSG00000123130.12374.40460505.82210-0.434002.400101.59360K562BOP1
ACOT9ENSG00000123130.12809.47250984.81380-0.282902.320401.31570K562CPEB4
ACOT9ENSG00000123130.12682.40820887.77610-0.379603.623102.81890K562EIF2S2
ACOT9ENSG00000123130.121168.314901432.43040-0.294002.862401.90790K562EIF4G2
ACOT9ENSG00000123130.12863.041901183.10560-0.455104.207003.27780K562GRSF1
ACOT9ENSG00000123130.12382.21470520.58640-0.445802.804702.20400K562HNRNPC
ACOT9ENSG00000123130.12601.56820791.19880-0.395303.972303.01750K562MTPAP
ACOT9ENSG00000123130.12737.86490879.05600-0.252602.286101.60190K562NSUN2
ACOT9ENSG00000123130.121231.413101562.88920-0.343902.363101.60960K562PUF60
ACOT9ENSG00000123130.12866.873501121.86110-0.372003.066801.37290K562RBM17
ACOT9ENSG00000123130.12646.76330816.33970-0.335902.226101.47580K562RBM22
ACOT9ENSG00000123130.12584.37090867.45890-0.569906.989005.73750K562SF3A3
ACOT9ENSG00000123130.12453.48740650.59680-0.520704.862403.71460K562SF3B4
ACOT9ENSG00000123130.12787.09920932.08460-0.243901.979801.36530K562UPF1
ACOT9ENSG00000123130.12601.47880797.55060-0.407103.208302.27060K562WDR3
ACOT9ENSG00000123130.121274.690501639.47230-0.363103.276702.32760K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACOT9 is not available on ENCORE database.





27 RBPs can affect the splicing of ACOT9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.127000.000010.01131excludedK562TAF15
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.184000.000000.00001excludedK562SF3B4
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.211000.000720.01561excludedHepG2U2AF1
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.335000.001350.09800excludedHepG2PRPF8
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.280000.000000.00001excludedK562AKAP8L
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.287000.000000.00000excludedHepG2U2AF2
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.305000.000000.00000excludedHepG2U2AF2
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.168000.000080.00141excludedK562AQR
SEACOT9ENSG00000123130.12chrX-2375245723752484237512882375133423754035237541330.390000.000050.03762includedHepG2LIN28B
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.286000.000000.00002excludedK562PUS1
SEACOT9ENSG00000123130.12chrX-2375245723752484237512882375133423754035237541330.398000.001290.06224includedHepG2PTBP1
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.246000.000350.07057excludedK562GPKOW
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.181000.000120.01271excludedHepG2FTO
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.459000.000000.00000excludedK562U2AF1
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.194000.000000.00001excludedK562U2AF1
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.169000.003690.08365excludedHepG2SF3A3
SEACOT9ENSG00000123130.12chrX-237524092375248423751288237513342375403523754133-0.199000.000330.02994excludedK562HNRNPUL1
SEACOT9ENSG00000123130.12chrX-2375240923752484237512882375133423754035237541330.405000.000210.02035includedHepG2TIAL1
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.189000.000000.00076excludedHepG2RBFOX2
SEACOT9ENSG00000123130.12chrX-2375244823752484237512882375133423754035237541330.312000.000420.09131includedHepG2NOL12
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.249000.000670.09167excludedK562SRSF7
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.260000.000000.00020excludedK562UTP18
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.428000.000000.00000excludedK562U2AF2
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.345000.000000.00000excludedK562U2AF2
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.294000.001210.04355excludedK562HNRNPU
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.203000.000140.00576excludedK562RBM15
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.190000.003010.06400excludedK562AGGF1
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.313000.000550.02521excludedK562SF3B1
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.239000.000090.00566excludedK562SF3B1
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.126000.000010.02228excludedK562QKI
SEACOT9ENSG00000123130.12chrX-237312512373132523725993237260612373999723740101-0.124000.000010.02068excludedK562PABPC4
SEACOT9ENSG00000123130.12chrX-237524482375248423751288237513342375403523754133-0.227000.001740.03032excludedK562HNRNPC
A3SSACOT9ENSG00000123130.12chrX-2372473523724974237247352372485623725993237260610.177000.000020.00133longerK562U2AF2
A3SSACOT9ENSG00000123130.12chrX-2372474423724974237247442372485623725993237260610.277000.000070.00277longerHepG2U2AF2
A3SSACOT9ENSG00000123130.12chrX-2372474423724974237247442372485623725993237260610.097000.004850.02811longerK562AQR
A3SSACOT9ENSG00000123130.12chrX-2375403523754170237540352375413323761241237613930.079000.000020.00024longerK562AQR
A3SSACOT9ENSG00000123130.12chrX-2372473523724974237247352372485623725993237260610.210000.000050.02752longerHepG2G3BP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ACOT9 is not avaliable on ENCORE database.