RP11-344E13.3

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-344E13.3 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-344E13.3 RNA is bound by 47 proteins.

eCLIP assay for RP11-344E13.3 is not avaliable on ENCORE database.

47 proteins are bound to RP11-344E13.3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	20806992	20807043	+	intron-Distal	3.50872	7.70677	K562	HNRNPL
chr17	20777720	20777754	+	intron-Distal	3.75249	8.77805	K562	KHSRP
chr17	20773887	20773952	+	intron-Distal	3.93148	3.79323	HepG2	STAU2
chr17	20778789	20778825	+	intron-Distal	5.27697	39.69680	K562	KHSRP
chr17	20796115	20796183	+	intron-Distal	4.32653	7.22647	K562	QKI
chr17	20787760	20787797	+	intron-Distal	3.84131	5.26073	HepG2	HLTF
chr17	20783523	20783664	+	intron-Distal	4.12313	6.88256	K562	CPSF6
chr17	20787596	20787661	+	intron-Distal	3.08022	6.12603	K562	SAFB2
chr17	20801727	20801849	+	intron-Distal	3.68784	8.99493	K562	SAFB2
chr17	20798822	20798922	+	intron-Distal	3.90717	3.43895	HepG2	LARP4
chr17	20807350	20807418	+	intron-Distal	4.30415	19.09708	K562	AGGF1
chr17	20796269	20796330	+	intron-Distal	4.30277	4.17759	HepG2	QKI
chr17	20779196	20779250	+	intron-Distal	4.01350	7.08005	HepG2	QKI
chr17	20787756	20787801	+	intron-Distal	4.75395	6.47232	K562	SAFB2
chr17	20772764	20772792	+	intron-Distal	3.12776	3.25506	K562	SAFB2
chr17	20874208	20874293	+	intron-Distal	4.44127	6.62423	HepG2	XPO5
chr17	20841914	20842010	+	intron-Distal,intron-Proximal	4.29290	6.26167	HepG2	ILF3
chr17	20890466	20890522	+	intron-Distal	4.25367	9.69126	HepG2	SLTM
chr17	20772695	20772759	+	intron-Distal	6.47174	17.39765	K562	GTF2F1
chr17	20808877	20808919	+	intron-Distal	5.95403	11.24529	HepG2	PTBP1
chr17	20890563	20890649	+	intron-Distal	3.70082	8.20977	HepG2	SLTM
chr17	20860004	20860023	+	intron-Distal,intron-Proximal	3.07736	5.47500	HepG2	PPIG
chr17	20799424	20799475	+	intron-Distal	3.22285	3.34231	K562	RBM15
chr17	20788474	20788580	+	intron-Distal	3.97535	10.41811	K562	SAFB
chr17	20788580	20788619	+	intron-Distal	3.23649	3.96358	K562	SAFB
chr17	20772773	20772819	+	intron-Distal	4.65831	6.46853	K562	EFTUD2
chr17	20799627	20799692	+	intron-Distal	3.45087	5.20141	K562	SLTM
chr17	20799408	20799487	+	intron-Distal	3.34806	5.55322	HepG2	HLTF
chr17	20772707	20772757	+	intron-Distal	3.96812	3.39593	HepG2	PRPF4
chr17	20778872	20778903	+	intron-Distal	4.33822	23.17463	K562	KHSRP
chr17	20776295	20776346	+	intron-Distal	3.05555	3.31130	K562	KHDRBS1
chr17	20874415	20874496	+	intron-Distal	4.09269	3.24322	HepG2	MATR3
chr17	20787501	20787548	+	intron-Distal	3.44638	4.16567	K562	SAFB
chr17	20800569	20800615	+	intron-Distal	4.27262	4.48994	K562	RBM15
chr17	20808826	20808877	+	intron-Distal	4.22043	10.74442	HepG2	PTBP1
chr17	20772506	20772553	+	intron-Distal	4.18566	6.07385	K562	GTF2F1
chr17	20823868	20823945	+	intron-Distal	3.52141	4.38996	HepG2	HNRNPM
chr17	20788486	20788537	+	intron-Distal	3.05610	3.11089	K562	PPIL4
chr17	20799413	20799536	+	intron-Distal	3.58298	8.01405	K562	SLTM
chr17	20772606	20772651	+	intron-Distal	4.17603	5.51270	K562	GTF2F1
chr17	20860013	20860057	+	intron-Distal,intron-Proximal	3.94099	6.65114	HepG2	PRPF8
chr17	20802620	20802659	+	intron-Distal	4.69358	5.32699	K562	SLTM
chr17	20841852	20841909	+	intron-Distal	3.77288	3.48745	HepG2	ILF3
chr17	20845138	20845227	+	intron-Distal	3.18580	3.63322	HepG2	MATR3
chr17	20787510	20787544	+	intron-Distal	4.94902	7.76000	K562	SAFB2
chr17	20787455	20787498	+	intron-Distal	3.91550	8.81167	HepG2	HLTF
chr17	20831595	20831678	+	intron-Distal	3.98503	5.35988	HepG2	HNRNPL
chr17	20796130	20796165	+	intron-Distal	4.23911	8.59328	HepG2	QKI
chr17	20801756	20801819	+	intron-Distal	3.93466	5.66214	K562	SLTM
chr17	20781304	20781349	+	intron-Distal	3.71938	3.39667	K562	HNRNPL
chr17	20780356	20780438	+	intron-Distal	4.50048	3.27829	HepG2	MATR3
chr17	20788151	20788251	+	intron-Distal	3.45400	8.76579	K562	RBM15
chr17	20772593	20772651	+	intron-Distal	4.43646	3.13028	HepG2	FAM120A
chr17	20787441	20787510	+	intron-Distal	5.27704	18.52835	K562	SAFB2
chr17	20807254	20807294	+	intron-Distal	5.64572	27.55286	K562	HNRNPL
chr17	20798865	20798949	+	intron-Distal	4.65839	8.02514	K562	SLTM
chr17	20774297	20774359	+	intron-Distal	4.05625	4.13307	HepG2	CSTF2
chr17	20774014	20774094	+	intron-Distal	3.46105	12.35448	K562	KHSRP
chr17	20859163	20859337	+	intron-Distal,intron-Proximal	4.61949	5.64557	HepG2	KHSRP
chr17	20803222	20803351	+	intron-Distal	3.71207	5.94978	K562	SAFB2
chr17	20780292	20780472	+	intron-Distal	5.49307	8.52796	K562	MATR3
chr17	20799174	20799234	+	intron-Distal	3.38950	3.65158	K562	YWHAG
chr17	20778903	20778921	+	intron-Distal	3.81737	12.05536	K562	KHSRP
chr17	20778736	20778829	+	intron-Distal	3.34376	3.23424	HepG2	FUBP3
chr17	20787240	20787308	+	intron-Distal	3.17579	7.73565	K562	HNRNPL
chr17	20801558	20801677	+	intron-Distal	4.96419	8.21054	K562	SAFB
chr17	20886585	20886655	+	intron-Distal	4.95990	11.33924	HepG2	SLTM
chr17	20778710	20778726	+	intron-Distal	3.92978	15.54794	K562	KHSRP
chr17	20842014	20842117	+	intron-Distal,intron-Proximal	4.25422	4.24441	HepG2	ILF3
chr17	20777135	20777180	+	intron-Distal	4.80968	10.47376	HepG2	QKI
chr17	20787829	20787889	+	intron-Distal	3.14699	7.57925	HepG2	HLTF
chr17	20788548	20788632	+	intron-Distal	3.36430	10.65774	K562	SAFB2
chr17	20800769	20800816	+	intron-Distal	3.31305	3.06830	K562	SAFB2
chr17	20807252	20807297	+	intron-Distal	4.71663	44.34019	K562	AGGF1
chr17	20787840	20787864	+	intron-Distal	3.12143	5.73784	K562	AGGF1
chr17	20800776	20800861	+	intron-Distal	3.15434	4.25378	K562	YWHAG
chr17	20787139	20787297	+	intron-Distal	4.01514	12.15293	HepG2	PTBP1
chr17	20772822	20772865	+	intron-Distal	3.84768	3.34600	K562	SAFB
chr17	20787681	20787728	+	intron-Distal	3.63611	5.38772	K562	RBM15
chr17	20799409	20799514	+	intron-Distal	4.06230	5.51111	K562	YWHAG
chr17	20844162	20844201	+	intron-Distal	4.04086	3.09122	HepG2	PTBP1
chr17	20807170	20807252	+	intron-Distal	3.90715	59.46723	K562	AGGF1
chr17	20790943	20791044	+	intron-Distal	4.10129	4.47016	HepG2	CSTF2
chr17	20778679	20778710	+	intron-Distal	3.50775	11.81155	K562	KHSRP
chr17	20879413	20879504	+	intron-Distal	5.59226	16.67986	HepG2	PTBP1
chr17	20780688	20780768	+	intron-Distal	4.00377	11.24044	HepG2	SUGP2
chr17	20784960	20785031	+	intron-Distal	4.20134	3.35169	HepG2	U2AF2
chr17	20789931	20789994	+	intron-Distal	3.12838	7.36118	K562	KHSRP
chr17	20801723	20801790	+	intron-Distal	4.77875	10.44844	HepG2	HLTF
chr17	20787478	20787501	+	intron-Distal	3.59277	5.35984	K562	SAFB
chr17	20787832	20787887	+	intron-Distal	4.08456	6.52318	K562	NIPBL
chr17	20787500	20787543	+	intron-Distal	4.04059	7.32646	HepG2	HLTF
chr17	20787965	20788096	+	intron-Distal	3.04396	4.35088	K562	NOLC1
chr17	20788027	20788096	+	intron-Distal	3.10709	6.33656	K562	SAFB2
chr17	20777180	20777223	+	intron-Distal	3.54385	6.52138	HepG2	QKI
chr17	20801228	20801259	+	intron-Distal	3.69874	3.01412	K562	SAFB2
chr17	20859602	20859659	+	intron-Distal	4.43770	4.38106	HepG2	PPIG
chr17	20879426	20879506	+	intron-Distal	3.55381	4.74917	HepG2	PCBP2
chr17	20777130	20777206	+	intron-Distal	5.65779	19.07464	K562	QKI
chr17	20793812	20793957	+	intron-Distal	4.16604	15.29023	HepG2	HNRNPL
chr17	20783507	20783590	+	intron-Distal	3.20687	7.92863	HepG2	CSTF2
chr17	20773149	20773199	+	intron-Distal	3.31145	4.09016	K562	DDX6
chr17	20783305	20783412	+	intron-Distal	3.26729	3.71597	K562	MATR3
chr17	20787828	20787884	+	intron-Distal	4.88838	7.56833	K562	SAFB
chr17	20857951	20857993	+	intron-Distal	3.82196	3.04956	HepG2	HNRNPL
chr17	20859971	20860047	+	intron-Distal,intron-Proximal	4.14179	7.53528	HepG2	EFTUD2
chr17	20835318	20835502	+	intron-Distal	3.97548	15.49316	HepG2	HNRNPL
chr17	20773147	20773181	+	intron-Distal	3.34153	5.16635	K562	DHX30
chr17	20812943	20813029	+	intron-Distal	3.50947	4.43403	HepG2	CSTF2
chr17	20832716	20832802	+	intron-Distal,intron-Proximal	4.96003	19.04050	HepG2	CSTF2
chr17	20792535	20792653	+	intron-Distal	3.12993	6.85260	K562	HNRNPK
chr17	20795638	20795748	+	intron-Distal,intron-Proximal	3.68194	9.42776	K562	ZNF622
chr17	20788161	20788245	+	intron-Distal	3.36285	9.47812	HepG2	HLTF
chr17	20773267	20773319	+	intron-Distal	3.73973	9.82670	K562	SAFB
chr17	20772718	20772755	+	intron-Distal	4.28389	5.51064	K562	DDX52
chr17	20832802	20832869	+	intron-Distal	3.32465	4.43403	HepG2	CSTF2
chr17	20777754	20777824	+	intron-Distal	3.69273	21.68960	K562	KHSRP
chr17	20801290	20801333	+	intron-Distal	3.85050	3.00828	K562	YWHAG
chr17	20801763	20801820	+	intron-Distal	3.65941	6.71445	K562	NIPBL
chr17	20784938	20785043	+	intron-Distal	5.49683	36.97704	K562	QKI
chr17	20808753	20808877	+	intron-Distal	6.41236	14.07413	K562	PTBP1
chr17	20836939	20837026	+	intron-Distal	3.99220	4.10017	HepG2	CSTF2
chr17	20778774	20778789	+	intron-Distal	5.47720	50.86418	K562	KHSRP
chr17	20799869	20799937	+	intron-Distal	3.76958	8.06836	K562	SLTM
chr17	20825867	20825915	+	intron-Distal	3.98996	3.53509	HepG2	HLTF
chr17	20825710	20825756	+	intron-Distal	4.17125	3.55983	HepG2	HLTF
chr17	20848450	20848504	+	intron-Distal	3.08298	3.10640	HepG2	SUGP2
chr17	20788483	20788532	+	intron-Distal	3.23309	7.26312	HepG2	HLTF
chr17	20798848	20798897	+	intron-Distal	4.47226	8.82647	HepG2	HLTF
chr17	20802222	20802317	+	intron-Distal,intron-Proximal	3.80293	7.51340	K562	SLTM
chr17	20833474	20833528	+	intron-Distal	3.75103	3.59547	HepG2	CSTF2
chr17	20780469	20780518	+	intron-Distal	3.07354	6.59727	HepG2	SUGP2
chr17	20811834	20811973	+	intron-Distal	3.88929	6.38205	HepG2	SRSF9
chr17	20787836	20787887	+	intron-Distal	4.33938	9.33079	K562	SAFB2
chr17	20772743	20772826	+	intron-Distal	3.71521	8.51201	K562	DDX21
chr17	20845849	20845981	+	intron-Distal	4.89011	5.00384	HepG2	SFPQ
chr17	20890451	20890523	+	intron-Distal	4.63144	5.09502	K562	SLTM
chr17	20793434	20793537	+	intron-Distal	4.37778	7.85753	HepG2	ILF3
chr17	20842642	20842820	+	intron-Distal	3.30143	5.42536	K562	KHSRP
chr17	20793755	20793805	+	intron-Distal	3.91978	9.72420	HepG2	HNRNPL
chr17	20787661	20787707	+	intron-Distal	3.34548	6.35363	K562	SAFB2
chr17	20772684	20772748	+	intron-Distal	3.35376	8.39646	K562	DHX30
chr17	20845465	20845564	+	intron-Distal	3.35631	3.57996	HepG2	XPO5
chr17	20788668	20788731	+	intron-Distal	3.23287	8.20017	K562	SAFB2
chr17	20842906	20842969	+	intron-Distal	4.12029	3.49011	K562	KHSRP
chr17	20787372	20787440	+	intron-Distal	3.59168	8.88150	K562	SAFB2
chr17	20807173	20807274	+	intron-Distal	4.04840	22.67389	HepG2	HNRNPL
chr17	20832650	20832710	+	intron-Distal,intron-Proximal	3.94506	3.10834	HepG2	CSTF2
chr17	20788142	20788234	+	intron-Distal	3.63876	6.77066	K562	SAFB
chr17	20778737	20778774	+	intron-Distal	4.51161	27.29295	K562	KHSRP
chr17	20783633	20783656	+	intron-Distal	4.53825	18.54156	K562	KHSRP
chr17	20788770	20788830	+	intron-Distal	3.13624	5.26287	K562	KHDRBS1
chr17	20808752	20808829	+	intron-Distal	3.10929	6.07135	K562	U2AF2
chr17	20879985	20880049	+	intron-Distal	4.18227	4.17759	HepG2	QKI
chr17	20772762	20772820	+	intron-Distal	3.17070	3.77330	K562	SAFB
chr17	20845898	20845989	+	intron-Distal	4.67260	4.79379	K562	KHSRP
chr17	20779001	20779027	+	intron-Distal	3.61781	11.03980	K562	KHSRP
chr17	20788769	20788831	+	intron-Distal	5.54073	8.68064	HepG2	QKI
chr17	20844801	20844832	+	intron-Distal	4.61022	4.17937	HepG2	PCBP2
chr17	20820076	20820167	+	intron-Distal	3.47748	8.76747	HepG2	QKI
chr17	20803233	20803300	+	intron-Distal	3.36591	5.20141	K562	SLTM
chr17	20775716	20775803	+	intron-Distal	3.46211	11.85381	K562	HNRNPL
chr17	20772759	20772821	+	intron-Distal	4.25754	11.22318	K562	GTF2F1
chr17	20800575	20800614	+	intron-Distal	3.67737	4.21638	K562	SLTM
chr17	20784997	20785044	+	intron-Distal	4.79480	5.54528	HepG2	QKI
chr17	20788024	20788090	+	intron-Distal	3.72107	9.03323	K562	RBM15
chr17	20778270	20778333	+	intron-Distal	4.75955	19.18937	K562	KHSRP
chr17	20807186	20807254	+	intron-Distal	4.31225	32.66997	K562	HNRNPL
chr17	20800554	20800620	+	intron-Distal	3.93445	3.55315	K562	SAFB
chr17	20783882	20783928	+	intron-Distal	3.07511	3.02914	K562	KHDRBS1
chr17	20803880	20803956	+	intron-Distal	3.41034	3.59765	K562	ILF3
chr17	20801963	20802021	+	intron-Distal	4.14870	4.96047	K562	SLTM
chr17	20833746	20833839	+	intron-Distal	4.14069	3.88068	HepG2	CSTF2
chr17	20779134	20779196	+	intron-Distal	4.13384	3.50357	HepG2	QKI
chr17	20778841	20778855	+	intron-Distal	4.87453	33.57972	K562	KHSRP
chr17	20779148	20779162	+	intron-Distal	3.15327	7.83495	K562	KHSRP
chr17	20779678	20779707	+	intron-Distal	3.25718	8.12819	K562	KHSRP
chr17	20774094	20774149	+	intron-Distal	3.29232	6.88763	K562	KHSRP
chr17	20811167	20811249	+	intron-Distal	3.00906	3.57155	HepG2	ILF3
chr17	20859929	20860017	+	intron-Distal,intron-Proximal	4.97028	12.50543	HepG2	U2AF2
chr17	20887023	20887078	+	intron-Distal	3.08628	4.35275	HepG2	HLTF
chr17	20799766	20799850	+	intron-Distal	3.75079	5.90319	K562	SLTM
chr17	20788470	20788520	+	intron-Distal	3.59488	5.13030	K562	RBM15
chr17	20886575	20886667	+	intron-Distal	3.95087	4.49353	K562	SLTM
chr17	20786937	20787061	+	intron-Distal	3.43813	9.38093	HepG2	HNRNPL
chr17	20778726	20778737	+	intron-Distal	3.93529	16.53044	K562	KHSRP
chr17	20773150	20773191	+	intron-Distal	4.75261	17.47093	K562	GTF2F1
chr17	20796165	20796177	+	intron-Distal	3.83000	5.08047	HepG2	QKI
chr17	20802232	20802326	+	intron-Distal,intron-Proximal	3.61082	8.99493	K562	SAFB2
chr17	20858989	20859051	+	intron-Distal	3.03578	3.12105	HepG2	HNRNPL
chr17	20787981	20788099	+	intron-Distal	3.27851	15.54534	HepG2	HLTF
chr17	20801740	20801822	+	intron-Distal	3.58952	5.12322	K562	YWHAG
chr17	20773236	20773304	+	intron-Distal	4.59751	4.15549	K562	TBRG4
chr17	20799546	20799647	+	intron-Distal	4.86257	6.08730	K562	YWHAG
chr17	20783832	20783860	+	intron-Distal	3.45537	7.29915	K562	KHSRP
chr17	20772765	20772808	+	intron-Distal	3.17447	4.87773	K562	DHX30
chr17	20823961	20824010	+	intron-Distal	3.62853	4.14896	HepG2	HNRNPM
chr17	20832903	20832978	+	intron-Distal	3.20307	4.78261	HepG2	CSTF2
chr17	20800016	20800061	+	intron-Distal	3.56008	5.42289	K562	SLTM
chr17	20787196	20787297	+	intron-Distal	4.41024	15.13074	K562	PTBP1
chr17	20793969	20794052	+	intron-Distal	3.02702	6.26523	K562	HNRNPL
chr17	20772846	20772889	+	intron-Distal	5.02086	6.43928	K562	GTF2F1
chr17	20823136	20823171	+	intron-Distal	3.14099	3.57147	HepG2	CSTF2
chr17	20835166	20835231	+	intron-Distal,intron-Proximal	3.38008	6.57527	HepG2	U2AF2
chr17	20828158	20828211	+	intron-Distal,intron-Proximal	3.71507	3.57857	HepG2	BCLAF1
chr17	20787707	20787792	+	intron-Distal	5.15955	7.73487	HepG2	BCLAF1
chr17	20819967	20820069	+	intron-Distal	4.51719	20.55132	HepG2	QKI
chr17	20795665	20795737	+	intron-Distal	3.99685	6.46803	K562	UCHL5
chr17	20788746	20788835	+	intron-Distal	5.11142	12.81155	K562	QKI
chr17	20778825	20778840	+	intron-Distal	4.66962	28.25746	K562	KHSRP
chr17	20772700	20772757	+	intron-Distal	3.70402	3.52528	HepG2	FAM120A
chr17	20773147	20773195	+	intron-Distal	4.69881	6.54349	K562	CSTF2T
chr17	20801225	20801298	+	intron-Distal	3.20494	3.65665	K562	SLTM
chr17	20773150	20773183	+	intron-Distal	3.71470	3.15816	HepG2	PRPF4
chr17	20898232	20898284	+	intron-Distal	3.08091	3.24283	HepG2	NKRF
chr17	20787972	20788024	+	intron-Distal	3.75867	7.69253	K562	RBM15
chr17	20778855	20778872	+	intron-Distal	4.60149	27.96464	K562	KHSRP
chr17	20834851	20834944	+	intron-Distal,intron-Proximal	4.31545	9.26846	HepG2	SF3A3
chr17	20803898	20803962	+	intron-Distal	4.68668	4.14527	K562	SLTM
chr17	20788675	20788724	+	intron-Distal	4.08496	3.91527	K562	PPIL4
chr17	20789821	20789917	+	intron-Distal	4.34132	9.78895	HepG2	CSTF2
chr17	20773961	20774009	+	intron-Distal	3.97162	6.46708	HepG2	XPO5
chr17	20861603	20861646	+	intron-Proximal	3.62534	8.77242	HepG2	U2AF2
chr17	20861697	20861777	+	intron-Proximal	5.06546	7.02967	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-344E13.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-344E13.3 is not available on ENCORE database.
77 RBPs can affect the levels of RP11-344E13.3.

The Knockdown/knockout RNA-Seq assay for RP11-344E13.3 is not available on ENCORE database.

77 RBPs can affect the gene expression of RP11-344E13.3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-344E13.3	ENSG00000233098.4	545.18030	358.65860	0.60400	4.48620	3.25430	HepG2	ADAR
RP11-344E13.3	ENSG00000233098.4	356.19770	571.56850	-0.68220	4.33360	3.68860	HepG2	AKAP1
RP11-344E13.3	ENSG00000233098.4	353.83340	472.93920	-0.41860	2.08930	1.40230	HepG2	ASCC1
RP11-344E13.3	ENSG00000233098.4	1102.61330	442.67320	1.31650	13.17270	11.55570	HepG2	CNOT7
RP11-344E13.3	ENSG00000233098.4	294.95920	547.54990	-0.89250	7.53600	6.54870	HepG2	DDX3X
RP11-344E13.3	ENSG00000233098.4	555.17930	382.55020	0.53720	3.25770	1.36090	HepG2	EIF3H
RP11-344E13.3	ENSG00000233098.4	969.60690	714.31180	0.44070	5.41900	4.62580	HepG2	ETF1
RP11-344E13.3	ENSG00000233098.4	861.17600	557.84330	0.62630	4.42470	3.46830	HepG2	FIP1L1
RP11-344E13.3	ENSG00000233098.4	359.31530	473.44680	-0.39800	1.99980	1.39900	HepG2	HNRNPK
RP11-344E13.3	ENSG00000233098.4	288.85030	384.91870	-0.41420	2.14940	1.31060	HepG2	HNRNPM
RP11-344E13.3	ENSG00000233098.4	312.14100	475.41230	-0.60700	3.87940	3.09230	HepG2	IGF2BP2
RP11-344E13.3	ENSG00000233098.4	587.29070	421.94070	0.47690	2.58150	1.44000	HepG2	KHDRBS1
RP11-344E13.3	ENSG00000233098.4	363.29420	519.07930	-0.51480	2.90360	2.25610	HepG2	NCBP2
RP11-344E13.3	ENSG00000233098.4	340.67330	462.33730	-0.44060	2.01060	1.38680	HepG2	PABPC4
RP11-344E13.3	ENSG00000233098.4	303.63390	480.73770	-0.66290	6.66440	5.78440	HepG2	PCBP1
RP11-344E13.3	ENSG00000233098.4	296.70410	489.15720	-0.72130	7.47650	6.66410	HepG2	PTBP1
RP11-344E13.3	ENSG00000233098.4	629.37580	523.00040	0.26700	2.08520	1.55590	HepG2	PUM1
RP11-344E13.3	ENSG00000233098.4	483.67580	597.04230	-0.30380	1.90100	1.45040	HepG2	RBM22
RP11-344E13.3	ENSG00000233098.4	785.39530	544.39450	0.52870	5.67870	4.94700	HepG2	NELFE
RP11-344E13.3	ENSG00000233098.4	254.50810	358.79640	-0.49550	3.45930	2.75310	HepG2	SAFB2
RP11-344E13.3	ENSG00000233098.4	420.60850	584.46190	-0.47460	2.47540	1.83830	HepG2	SF3A3
RP11-344E13.3	ENSG00000233098.4	310.62370	509.29620	-0.71330	7.41640	6.52460	HepG2	SF3B4
RP11-344E13.3	ENSG00000233098.4	545.20020	674.35460	-0.30670	2.15250	1.69320	HepG2	SRFBP1
RP11-344E13.3	ENSG00000233098.4	381.28350	486.44760	-0.35140	2.33260	1.75200	HepG2	SRSF5
RP11-344E13.3	ENSG00000233098.4	338.26280	432.46690	-0.35440	2.34410	1.82780	HepG2	SRSF9
RP11-344E13.3	ENSG00000233098.4	382.67440	553.22890	-0.53180	5.20190	4.39530	HepG2	SUCLG1
RP11-344E13.3	ENSG00000233098.4	279.82630	376.72440	-0.42900	2.54530	1.64260	HepG2	SUPT6H
RP11-344E13.3	ENSG00000233098.4	283.06690	391.52520	-0.46800	2.92580	2.41440	HepG2	TIAL1
RP11-344E13.3	ENSG00000233098.4	234.35720	394.97750	-0.75310	6.15240	5.37080	HepG2	TRIM56
RP11-344E13.3	ENSG00000233098.4	366.87620	477.22650	-0.37940	1.86290	1.33650	HepG2	U2AF1
RP11-344E13.3	ENSG00000233098.4	372.06240	518.32770	-0.47830	4.24360	3.40810	HepG2	UPF1
RP11-344E13.3	ENSG00000233098.4	692.60550	500.42590	0.46880	4.77550	4.02380	HepG2	UTP3
RP11-344E13.3	ENSG00000233098.4	324.84970	570.06210	-0.81130	11.94390	11.00550	HepG2	ZNF622
RP11-344E13.3	ENSG00000233098.4	1911.07940	2772.35110	-0.53670	6.07210	5.28300	K562	AGGF1
RP11-344E13.3	ENSG00000233098.4	834.58430	1130.94310	-0.43840	5.55830	3.35130	K562	AKAP1
RP11-344E13.3	ENSG00000233098.4	2287.70130	3046.06350	-0.41300	4.62110	3.27300	K562	AKAP8
RP11-344E13.3	ENSG00000233098.4	1421.05320	2884.67550	-1.02140	16.35010	14.52140	K562	AKAP8L
RP11-344E13.3	ENSG00000233098.4	865.00000	1105.08980	-0.35340	4.05590	1.50940	K562	ASCC1
RP11-344E13.3	ENSG00000233098.4	1882.19440	3026.56500	-0.68530	9.32330	7.52380	K562	ATP5C1
RP11-344E13.3	ENSG00000233098.4	1635.07030	2269.54780	-0.47310	2.66250	1.80770	K562	BOP1
RP11-344E13.3	ENSG00000233098.4	1296.32370	985.46540	0.39540	2.82960	1.76030	K562	CCAR1
RP11-344E13.3	ENSG00000233098.4	2352.67050	3313.37650	-0.49400	4.59900	3.04040	K562	CCDC124
RP11-344E13.3	ENSG00000233098.4	2022.15380	2503.22530	-0.30790	3.91250	2.58860	K562	CPEB4
RP11-344E13.3	ENSG00000233098.4	1511.79130	2413.23560	-0.67470	12.09630	10.44800	K562	CPSF6
RP11-344E13.3	ENSG00000233098.4	1597.47140	1873.47150	-0.22990	2.44740	1.31370	K562	DDX21
RP11-344E13.3	ENSG00000233098.4	835.93820	1145.90560	-0.45500	4.62490	3.22700	K562	DDX3X
RP11-344E13.3	ENSG00000233098.4	1619.37320	2590.37770	-0.67770	18.87950	17.32320	K562	DDX47
RP11-344E13.3	ENSG00000233098.4	858.46930	1161.78710	-0.43650	5.28910	3.27640	K562	DDX6
RP11-344E13.3	ENSG00000233098.4	710.15940	996.69520	-0.48900	3.76040	2.68320	K562	EFTUD2
RP11-344E13.3	ENSG00000233098.4	1225.70560	1436.81830	-0.22930	1.96310	1.33890	K562	EIF2S2
RP11-344E13.3	ENSG00000233098.4	777.38340	1017.75820	-0.38870	3.65630	2.75040	K562	EIF3G
RP11-344E13.3	ENSG00000233098.4	892.12380	1197.17300	-0.42430	3.77630	2.82150	K562	EIF4A3
RP11-344E13.3	ENSG00000233098.4	1684.97290	1280.86010	0.39550	3.01210	1.82470	K562	FKBP4
RP11-344E13.3	ENSG00000233098.4	1579.47820	2455.30330	-0.63650	4.37520	3.29850	K562	FMR1
RP11-344E13.3	ENSG00000233098.4	1062.97910	1245.00690	-0.22800	1.91290	1.39170	K562	FXR1
RP11-344E13.3	ENSG00000233098.4	1512.51300	2304.09020	-0.60720	6.02460	4.85230	K562	GPKOW
RP11-344E13.3	ENSG00000233098.4	1849.92140	1344.31060	0.46050	5.70400	4.18460	K562	HNRNPA1
RP11-344E13.3	ENSG00000233098.4	764.71230	1197.48320	-0.64700	6.49560	4.53850	K562	HNRNPK
RP11-344E13.3	ENSG00000233098.4	1839.10360	2340.95470	-0.34810	3.54510	2.33070	K562	HNRNPL
RP11-344E13.3	ENSG00000233098.4	815.38980	1580.71520	-0.95500	6.20300	4.73310	K562	HNRNPM
RP11-344E13.3	ENSG00000233098.4	1745.91400	2606.03190	-0.57790	3.20090	2.34890	K562	HSPD1
RP11-344E13.3	ENSG00000233098.4	2026.13570	3061.64730	-0.59560	6.05660	4.72990	K562	KIF1C
RP11-344E13.3	ENSG00000233098.4	2044.86600	2930.51820	-0.51910	2.72220	1.65760	K562	MAK16
RP11-344E13.3	ENSG00000233098.4	1609.52370	1257.55000	0.35590	3.36490	2.33420	K562	MATR3
RP11-344E13.3	ENSG00000233098.4	2717.66510	3429.77850	-0.33570	2.63600	1.75200	K562	MBNL1
RP11-344E13.3	ENSG00000233098.4	1454.71390	2404.00120	-0.72470	7.23530	5.55430	K562	NAA15
RP11-344E13.3	ENSG00000233098.4	1101.63780	2010.87080	-0.86820	5.03390	3.58710	K562	PABPN1
RP11-344E13.3	ENSG00000233098.4	1649.70900	2181.62370	-0.40320	2.06720	1.36130	K562	PPIG
RP11-344E13.3	ENSG00000233098.4	477.19480	969.89810	-1.02330	13.55570	11.88600	K562	PRPF8
RP11-344E13.3	ENSG00000233098.4	1270.52240	2861.38960	-1.17130	14.63080	13.42010	K562	PUS1
RP11-344E13.3	ENSG00000233098.4	1566.33310	2787.50990	-0.83160	10.77610	9.62930	K562	RBM15
RP11-344E13.3	ENSG00000233098.4	774.11690	1028.03150	-0.40930	3.57150	2.03660	K562	RBM25
RP11-344E13.3	ENSG00000233098.4	1369.80470	2473.92810	-0.85280	4.49120	2.41970	K562	RBM39
RP11-344E13.3	ENSG00000233098.4	1849.67100	1235.32070	0.58230	6.47620	4.72370	K562	NELFE
RP11-344E13.3	ENSG00000233098.4	476.91870	987.98170	-1.05070	12.36380	10.61560	K562	RPS19
RP11-344E13.3	ENSG00000233098.4	843.27530	1205.78050	-0.51590	4.88500	3.44840	K562	SAFB
RP11-344E13.3	ENSG00000233098.4	1810.26790	2109.54950	-0.22070	2.33490	1.58020	K562	SF3A3
RP11-344E13.3	ENSG00000233098.4	581.94150	1126.94820	-0.95350	18.22160	15.84890	K562	SF3B4
RP11-344E13.3	ENSG00000233098.4	1449.43290	1144.06050	0.34120	2.70290	1.69430	K562	SRFBP1
RP11-344E13.3	ENSG00000233098.4	1334.19830	1671.98470	-0.32560	4.11220	2.66300	K562	SRSF7
RP11-344E13.3	ENSG00000233098.4	1349.02350	1049.84420	0.36160	4.21140	2.58560	K562	SSB
RP11-344E13.3	ENSG00000233098.4	1129.00230	1357.27430	-0.26570	2.20140	1.46790	K562	SYNCRIP
RP11-344E13.3	ENSG00000233098.4	622.05360	1050.61440	-0.75610	7.39320	5.45020	K562	U2AF1
RP11-344E13.3	ENSG00000233098.4	717.99490	1084.91770	-0.59550	7.64170	6.30100	K562	U2AF2
RP11-344E13.3	ENSG00000233098.4	1472.09570	2266.89700	-0.62280	16.54040	14.95150	K562	UPF1
RP11-344E13.3	ENSG00000233098.4	1972.74700	1426.92840	0.46720	5.76090	3.36380	K562	UPF2
RP11-344E13.3	ENSG00000233098.4	1853.68670	2900.56110	-0.64590	3.57740	2.04600	K562	UTP18
RP11-344E13.3	ENSG00000233098.4	1545.06830	2017.05110	-0.38460	7.19170	5.88780	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-344E13.3 is not available on ENCORE database.

10 RBPs can affect the splicing of RP11-344E13.3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.11800	0.00356	0.08144	excluded	K562	AKAP8L
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.41900	0.00113	0.06325	excluded	HepG2	AKAP1
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.20000	0.00274	0.08340	excluded	K562	FXR1
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.18800	0.00000	0.00002	excluded	K562	PUS1
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.41000	0.00002	0.00147	excluded	HepG2	SF3A3
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.12200	0.00204	0.05807	excluded	K562	UTP18
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.11600	0.00153	0.03769	excluded	K562	RBM15
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.12800	0.00020	0.00780	excluded	K562	AGGF1
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.47200	0.00049	0.06278	excluded	HepG2	KHSRP
SE	RP11-344E13.3	ENSG00000233098.4	chr17	+	20790904	20791162	20771745	20771998	20795542	20795745	-0.26500	0.00220	0.07228	excluded	K562	PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-344E13.3

General Information

Functions

Localization

Domains (AlphaFold: RP11-344E13.3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-344E13.3 is not avaliable on ENCORE database.

47 proteins are bound to RP11-344E13.3 RNA:

eCLIP assay for RP11-344E13.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-344E13.3 is not available on ENCORE database.

77 RBPs can affect the gene expression of RP11-344E13.3 :

The Knockdown/knockout RNA-Seq assay for RP11-344E13.3 is not available on ENCORE database.

10 RBPs can affect the splicing of RP11-344E13.3 :

The Knockdown/knockout RNA-Seq assay for RP11-344E13.3 is not avaliable on ENCORE database.