ALG6

General Information

Gene Name       : ALG6
Gene ID             : ENSG00000088035.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ALG6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ALG6ENSG00000088035.1613.0211.5412.28ENCSR000AEF
HepG2ALG6ENSG00000088035.164.318.986.64ENCSR985KAT
K562ALG6ENSG00000088035.1611.7812.7312.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ALG6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ALG6 RNA is bound by 4 proteins.  







eCLIP assay for ALG6 is not avaliable on ENCORE database.





4 proteins are bound to ALG6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16383334163833366+5'-UTR,intron-Proximal4.002245.80101K562DDX21
chr16387773263877802+CDS,intron-Proximal4.328648.79285K562AQR
chr16387771963877805+CDS,intron-Proximal3.460435.31369K562PRPF8
chr16388129763881388+intron-Distal4.345625.62258K562KHSRP
chr16387285663872935+intron-Distal,intron-Proximal3.578403.02234K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ALG6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ALG6 is not available on ENCORE database.

  • 37 RBPs can affect the levels of ALG6.  








The Knockdown/knockout RNA-Seq assay for ALG6 is not available on ENCORE database.





37 RBPs can affect the gene expression of ALG6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ALG6ENSG00000088035.11448.04450246.345000.862905.665904.93650HepG2AKAP1
ALG6ENSG00000088035.11111.24140171.73390-0.626502.783602.01470HepG2AKAP8L
ALG6ENSG00000088035.11282.42820193.658000.544302.506501.76580HepG2CIRBP
ALG6ENSG00000088035.1188.27850202.68250-1.199106.078605.19210HepG2DDX6
ALG6ENSG00000088035.11110.14230209.67750-0.928803.777302.97970HepG2EIF4B
ALG6ENSG00000088035.11143.03020205.19740-0.520702.187201.45670HepG2EIF4G2
ALG6ENSG00000088035.1173.12750144.22560-0.979802.800202.15570HepG2GPKOW
ALG6ENSG00000088035.11129.82490204.03220-0.652202.563101.89000HepG2HNRNPK
ALG6ENSG00000088035.11194.76180114.693300.763803.736302.79890HepG2MSI2
ALG6ENSG00000088035.11110.53520205.54780-0.895004.808504.04910HepG2PUF60
ALG6ENSG00000088035.1174.66400166.79660-1.159606.992206.18710HepG2SRSF9
ALG6ENSG00000088035.1177.56920126.76500-0.708602.611802.12320HepG2TIAL1
ALG6ENSG00000088035.11172.67220115.086100.585202.383601.81820HepG2UTP3
ALG6ENSG00000088035.11191.76910112.864900.764703.166901.98640HepG2XPO5
ALG6ENSG00000088035.11187.62690269.44420-0.522102.827102.25330K562AGGF1
ALG6ENSG00000088035.11191.29170280.36150-0.551502.879002.21270K562AKAP8L
ALG6ENSG00000088035.11680.32010519.364500.389402.665001.44750K562APOBEC3C
ALG6ENSG00000088035.11312.74350568.82710-0.863004.335703.63300K562AQR
ALG6ENSG00000088035.11167.28930246.38970-0.558602.352701.55490K562BOP1
ALG6ENSG00000088035.11247.81540365.86790-0.562102.962601.48770K562BUD13
ALG6ENSG00000088035.11258.72870374.18070-0.532302.727501.30940K562CKAP4
ALG6ENSG00000088035.11302.86610409.86320-0.436502.656301.57310K562CPEB4
ALG6ENSG00000088035.11168.73430261.96740-0.634603.382402.51240K562CPSF6
ALG6ENSG00000088035.11261.77230377.56470-0.528403.118102.21420K562FIP1L1
ALG6ENSG00000088035.11165.80550266.57570-0.685103.618002.63490K562FMR1
ALG6ENSG00000088035.11394.13390213.257100.886008.495707.50670K562FXR1
ALG6ENSG00000088035.11335.99640226.305700.570102.646501.95920K562G3BP2
ALG6ENSG00000088035.11160.48960250.10200-0.640003.132402.29070K562GPKOW
ALG6ENSG00000088035.11198.45600297.35680-0.583402.680901.67510K562IGF2BP2
ALG6ENSG00000088035.11251.09060333.33820-0.408802.074101.30340K562MBNL1
ALG6ENSG00000088035.11148.26250244.13270-0.719503.713602.68830K562METAP2
ALG6ENSG00000088035.11211.46490301.19630-0.510303.113902.32600K562NSUN2
ALG6ENSG00000088035.11325.95730428.58250-0.394902.156301.43670K562PPIG
ALG6ENSG00000088035.11844.31590682.930200.305902.446801.44770K562PUM1
ALG6ENSG00000088035.11181.69330297.20860-0.710004.817303.76680K562SF3A3
ALG6ENSG00000088035.11175.99690249.48940-0.503402.614801.48270K562SRSF7
ALG6ENSG00000088035.11337.08160186.273000.855606.924805.61140K562SYNCRIP
ALG6ENSG00000088035.11119.26080197.25070-0.725903.264402.21760K562TRIM56
ALG6ENSG00000088035.11338.62010226.558200.579703.824002.87970K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ALG6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ALG6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ALG6 is not avaliable on ENCORE database.