ARF1

General Information

Gene Name       : ARF1
Gene ID             : ENSG00000143761.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARF1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARF1ENSG00000143761.1561.23167.90114.56ENCSR000AEF
HepG2ARF1ENSG00000143761.15449.44178.63314.03ENCSR985KAT
K562ARF1ENSG00000143761.15586.16399.05492.61ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARF1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • ARF1 RNA is bound by 50 proteins.  







eCLIP assay for ARF1 is not avaliable on ENCORE database.





50 proteins are bound to ARF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1228286624228286686+3'-UTR4.86100400.00000K562UPF1
chr1228285745228285818+3'-UTR,intron-Distal3.6859333.70879HepG2AKAP1
chr1228286535228286586+3'-UTR5.9858835.21033HepG2UPF1
chr1228284727228284796+3'-UTR,intron-Proximal3.2210214.16762K562SF3B4
chr1228286126228286181+3'-UTR,intron-Distal4.2019116.98565HepG2AKAP1
chr1228286298228286408+3'-UTR,intron-Distal,intron-Proximal7.04401148.26850HepG2UPF1
chr1228286406228286519+3'-UTR,intron-Proximal5.1040237.81158HepG2AKAP1
chr1228286207228286244+3'-UTR,intron-Distal4.3645676.22785K562UPF1
chr1228286082228286125+3'-UTR,intron-Distal5.8883168.31426K562UPF1
chr1228285721228285830+3'-UTR,intron-Distal3.1042821.40809K562PUM1
chr1228286347228286408+3'-UTR,intron-Proximal3.1386015.45992K562IGF2BP2
chr1228286514228286605+3'-UTR3.0285921.75387K562AKAP1
chr1228285897228285951+3'-UTR,intron-Distal3.055249.72372HepG2LARP4
chr1228285959228285997+3'-UTR,intron-Distal6.5596668.58966HepG2UPF1
chr1228286723228286749+3'-UTR3.8983516.22507K562TIA1
chr1228286301228286404+3'-UTR,intron-Distal,intron-Proximal3.6040642.65244K562PCBP1
chr1228286749228286765+3'-UTR3.3039234.07924K562TIA1
chr1228286781228286802+3'-UTR3.6012225.01355K562TIA1
chr1228286266228286277+3'-UTR,intron-Distal4.329584.96063K562LIN28B
chr1228286412228286418+3'-UTR,intron-Proximal3.2575037.89364K562UPF1
chr1228286310228286418+3'-UTR,intron-Distal,intron-Proximal3.3468932.44284K562AKAP1
chr1228286125228286186+3'-UTR,intron-Distal4.28246400.00000K562UPF1
chr1228286641228286688+3'-UTR3.2100110.17656K562IGF2BP2
chr1228285897228285913+3'-UTR,intron-Distal4.982548.15576HepG2TIA1
chr1228284777228284842+3'-UTR,CDS,intron-Proximal3.8632621.80646K562DROSHA
chr1228285752228285844+3'-UTR,intron-Distal3.1509745.32359K562DDX6
chr1228286008228286029+3'-UTR,intron-Distal3.3274621.30090K562IGF2BP2
chr1228286187228286246+3'-UTR,intron-Distal6.2514842.06673HepG2UPF1
chr1228286605228286684+3'-UTR4.5925421.70890HepG2AKAP1
chr1228286312228286409+3'-UTR,intron-Distal,intron-Proximal3.36264400.00000K562UPF1
chr1228286030228286082+3'-UTR,intron-Distal5.63553400.00000K562UPF1
chr1228286421228286458+3'-UTR,intron-Proximal5.6290343.23350HepG2UPF1
chr1228286618228286678+3'-UTR3.0022514.09350K562METAP2
chr1228285961228286027+3'-UTR,intron-Distal3.182555.10289HepG2TIAL1
chr1228285894228285955+3'-UTR,intron-Distal5.11631400.00000K562PUM2
chr1228286538228286576+3'-UTR3.8317562.77355K562UPF1
chr1228286308228286406+3'-UTR,intron-Distal,intron-Proximal4.9049647.49025HepG2AKAP1
chr1228286424228286457+3'-UTR,intron-Proximal3.4739462.86601K562UPF1
chr1228285963228286060+3'-UTR,intron-Distal3.2641022.86366HepG2DDX55
chr1228285971228286060+3'-UTR,intron-Distal3.2267017.63946HepG2DDX6
chr1228285836228285894+3'-UTR,intron-Distal5.19223400.00000K562PUM2
chr1228285904228285939+3'-UTR,intron-Distal3.029647.65351K562DDX21
chr1228285897228285943+3'-UTR,intron-Distal3.2285910.73236HepG2DDX55
chr1228286585228286621+3'-UTR4.1941374.16045K562UPF1
chr1228286121228286187+3'-UTR,intron-Distal5.6699131.16034HepG2UPF1
chr1228284778228284793+3'-UTR,intron-Proximal3.700184.75864HepG2DDX3X
chr1228285955228286041+3'-UTR,intron-Distal5.5332945.78835HepG2AKAP1
chr1228286858228286885+3'-UTR4.2100510.43661K562PABPC4
chr1228286639228286677+3'-UTR6.3739619.62541HepG2UPF1
chr1228286188228286207+3'-UTR,intron-Distal3.5647410.99538K562IGF2BP2
chr1228286792228286845+3'-UTR4.7115730.18410K562IGF2BP1
chr1228286590228286599+3'-UTR3.2186610.56266K562IGF2BP2
chr1228286193228286241+3'-UTR,intron-Distal5.2547519.95379HepG2AKAP1
chr1228286741228286804+3'-UTR3.205803.90513HepG2TIA1
chr1228285850228285873+3'-UTR,intron-Distal3.291226.62410HepG2SUB1
chr1228285745228285831+3'-UTR,intron-Distal6.50486100.70281HepG2UPF1
chr1228286847228286896+3'-UTR7.2386534.17939K562IGF2BP1
chr1228286743228286759+3'-UTR4.16118400.00000K562UPF1
chr1228285813228285844+3'-UTR,intron-Distal3.0368461.73679K562TIA1
chr1228285912228285951+3'-UTR,intron-Distal4.8996548.65418K562TIA1
chr1228285959228286030+3'-UTR,intron-Distal4.74199400.00000K562UPF1
chr1228285954228286048+3'-UTR,intron-Distal3.8769037.05447K562PUM1
chr1228285900228285910+3'-UTR,intron-Distal3.305304.34066K562IGF2BP1
chr1228286719228286756+3'-UTR4.6890412.95192HepG2AKAP1
chr1228286580228286615+3'-UTR3.8512411.30368K562METAP2
chr1228285760228285824+3'-UTR,intron-Distal3.2899334.88773K562RPS3
chr1228285997228286049+3'-UTR,intron-Distal6.0658961.02662HepG2UPF1
chr1228286458228286514+3'-UTR5.9764261.91943HepG2UPF1
chr1228285913228285940+3'-UTR,intron-Distal5.036818.15576HepG2TIA1
chr1228286033228286059+3'-UTR,intron-Distal3.533105.97151K562IGF2BP1
chr1228285979228286008+3'-UTR,intron-Distal3.5894221.08136K562IGF2BP2
chr1228285900228285951+3'-UTR,intron-Distal3.6842613.50011K562PUM1
chr1228286759228286769+3'-UTR3.62030400.00000K562UPF1
chr1228286281228286328+3'-UTR,intron-Distal3.207474.74492HepG2LIN28B
chr1228286748228286771+3'-UTR3.217609.55092K562IGF2BP2
chr1228286539228286573+3'-UTR4.8172314.66282HepG2AKAP1
chr1228286186228286207+3'-UTR,intron-Distal4.3012276.96694K562UPF1
chr1228285898228285913+3'-UTR,intron-Distal3.0237623.61000K562PABPC4
chr1228286161228286188+3'-UTR,intron-Distal3.8958110.25273K562IGF2BP2
chr1228284793228284851+3'-UTR,CDS3.197483.44876HepG2DDX3X
chr1228286130228286179+3'-UTR,intron-Distal3.1914417.45644HepG2SUB1
chr1228285895228285939+3'-UTR,intron-Distal5.8506231.20821HepG2AKAP1
chr1228285754228285811+3'-UTR,intron-Distal3.09424400.00000K562PUM2
chr1228285758228285828+3'-UTR,intron-Distal3.3418917.69667HepG2DDX6
chr1228285904228285927+3'-UTR,intron-Distal5.4444717.14784HepG2UPF1
chr1228285811228285836+3'-UTR,intron-Distal3.96930400.00000K562PUM2
chr1228286277228286285+3'-UTR,intron-Distal5.3034128.54862K562LIN28B
chr1228285898228285943+3'-UTR,intron-Distal4.42759400.00000K562UPF1
chr1228285902228285912+3'-UTR,intron-Distal4.8904843.99400K562TIA1
chr1228285754228285829+3'-UTR,intron-Distal4.2826214.71269HepG2IGF2BP3
chr1228286460228286523+3'-UTR4.57229400.00000K562UPF1
chr1228285896228285941+3'-UTR,intron-Distal3.985085.41500HepG2TIAL1
chr1228286743228286792+3'-UTR4.2255934.65441K562IGF2BP1
chr1228285756228285830+3'-UTR,intron-Distal3.1168527.94135K562IGF2BP2
chr1228285732228285804+3'-UTR,intron-Distal3.4957024.89422K562PCBP1
chr1228286771228286790+3'-UTR3.3934510.25941K562IGF2BP2
chr1228286605228286687+3'-UTR3.4094524.09554K562AKAP1
chr1228284792228284815+3'-UTR3.0385533.49316K562YBX3
chr1228286118228286207+3'-UTR,intron-Distal3.1085238.91186K562PABPC4
chr1228286408228286430+3'-UTR,intron-Proximal4.3123115.65946K562IGF2BP2
chr1228285910228285946+3'-UTR,intron-Distal3.756416.79800K562IGF2BP1
chr1228284776228284867+3'-UTR,CDS,intron-Proximal3.4670650.53591K562DDX3X
chr1228286601228286639+3'-UTR3.040173.09950HepG2IGF2BP3
chr1228286716228286743+3'-UTR4.1749479.48266K562UPF1
chr1228286430228286460+3'-UTR,intron-Proximal3.0723710.62271K562IGF2BP2
chr1228286769228286810+3'-UTR4.31796400.00000K562UPF1
chr1228286646228286689+3'-UTR4.396535.00970HepG2IGF2BP3
chr1228286207228286273+3'-UTR,intron-Distal3.107097.46285K562IGF2BP2
chr1228286147228286190+3'-UTR,intron-Distal3.411216.52292K562IGF2BP1
chr1228285955228286028+3'-UTR,intron-Distal4.16360400.00000K562PUM2
chr1228286855228286893+3'-UTR5.4658587.23290K562PUM2
chr1228285759228285843+3'-UTR,intron-Distal3.2548018.18528HepG2DDX55
chr1228286285228286293+3'-UTR,intron-Distal4.9574628.53864K562LIN28B
chr1228285757228285843+3'-UTR,intron-Distal3.6054835.41982K562IGF2BP1
chr1228285896228285938+3'-UTR,intron-Distal3.173129.24884K562APOBEC3C
chr1228285959228286033+3'-UTR,intron-Distal4.0002027.09312K562IGF2BP1
chr1228284734228284809+3'-UTR,intron-Proximal4.078207.08450HepG2AQR
chr1228285963228286045+3'-UTR,intron-Distal3.3318842.93926K562DDX6
chr1228286765228286781+3'-UTR3.1556633.82804K562TIA1
chr1228270465228270502+5'-UTR,intron-Proximal4.282514.28193HepG2AQR
chr1228270878228270944+5'-UTR,intron-Distal3.733806.54247K562NONO
chr1228271054228271181+5'-UTR,intron-Distal,intron-Proximal3.6351610.58998K562FUS
chr1228270488228270577+5'-UTR,intron-Distal,intron-Proximal4.4111214.97053K562EWSR1
chr1228270860228270925+5'-UTR,intron-Distal4.444868.71496K562EWSR1
chr1228270427228270467+5'-UTR,intron-Proximal4.143684.38588HepG2DDX3X
chr1228270440228270517+5'-UTR,intron-Proximal3.8369713.55747HepG2PRPF8
chr1228270442228270465+5'-UTR3.309394.47839K562METAP2
chr1228270470228270587+5'-UTR,intron-Distal,intron-Proximal3.212648.78510K562FUS
chr1228270494228270597+5'-UTR,intron-Distal,intron-Proximal3.845667.02766K562NONO
chr1228270422228270467+5'-UTR,intron-Proximal3.0422717.07557K562DDX3X
chr1228271020228271067+5'-UTR,intron-Distal,intron-Proximal3.760706.75693K562NONO
chr1228270439228270467+5'-UTR,intron-Proximal3.855816.14554K562DROSHA
chr1228270487228270567+5'-UTR,intron-Distal,intron-Proximal3.390813.64037HepG2NCBP2
chr1228271029228271065+5'-UTR,intron-Distal,intron-Proximal3.346053.72952K562EXOSC5
chr1228271073228271164+5'-UTR,intron-Distal,intron-Proximal3.068654.49934K562XRN2
chr1228270477228270594+5'-UTR,intron-Distal,intron-Proximal3.166093.91530HepG2PRPF4
chr1228270479228270609+5'-UTR,intron-Distal,intron-Proximal3.006455.37119K562XRN2
chr1228270891228270937+5'-UTR,intron-Distal3.552196.02879K562FUS
chr1228271028228271182+5'-UTR,intron-Distal,intron-Proximal3.5073018.65938K562EWSR1
chr1228285032228285052+CDS,intron-Proximal5.4335348.14650K562LIN28B
chr1228285079228285152+CDS,intron-Distal4.1356837.52492K562RPS3
chr1228285096228285123+CDS,intron-Distal3.365744.19763K562DDX24
chr1228285043228285067+CDS,intron-Proximal3.039948.80576K562SND1
chr1228285149228285188+CDS,intron-Distal,intron-Proximal4.398694.67689HepG2PPIG
chr1228285338228285360+CDS,intron-Distal3.864115.68852HepG2RPS3
chr1228285044228285123+CDS,intron-Distal,intron-Proximal4.3145322.04680K562METAP2
chr1228284877228284904+CDS3.787196.91717K562METAP2
chr1228285067228285153+CDS,intron-Distal,intron-Proximal4.0350214.52019HepG2RPS3
chr1228285629228285657+CDS,intron-Distal3.519927.46241K562RPS3
chr1228285147228285195+CDS,intron-Distal,intron-Proximal3.246389.01982HepG2PRPF8
chr1228285222228285354+CDS,intron-Distal,intron-Proximal5.0487515.34254HepG2AQR
chr1228284979228285054+CDS,intron-Proximal3.883743.56713HepG2SF3B4
chr1228285042228285064+CDS,intron-Proximal3.0488524.52308K562YBX3
chr1228285578228285628+CDS,intron-Distal3.323228.54427K562IGF2BP2
chr1228285485228285580+CDS,intron-Distal,intron-Proximal4.478668.29703HepG2AQR
chr1228285628228285661+CDS,intron-Distal3.324629.85830K562IGF2BP2
chr1228284998228285046+CDS,intron-Proximal4.190867.95645K562EFTUD2
chr1228285661228285688+CDS,intron-Distal3.3917813.26238K562IGF2BP2
chr1228284922228284962+CDS3.6957013.15410K562SND1
chr1228285245228285320+CDS,intron-Distal,intron-Proximal3.053246.61836K562AQR
chr1228285152228285191+CDS,intron-Distal,intron-Proximal3.276764.80460HepG2AQR
chr1228285152228285200+CDS,intron-Distal,intron-Proximal4.096406.32052K562AQR
chr1228284821228284838+CDS3.2714231.14304K562YBX3
chr1228285686228285708+CDS,intron-Distal3.323526.88391K562RPS3
chr1228282780228282819+intron-Distal3.600603.76275K562PTBP1
chr1228276872228276912+intron-Distal3.612223.77567K562NONO
chr1228276029228276086+intron-Distal,intron-Proximal3.516578.69270K562EWSR1
chr1228276559228276619+intron-Distal3.332456.79803K562HNRNPM
chr1228271954228272019+intron-Distal3.904956.41051K562EXOSC5
chr1228275884228275923+intron-Distal4.598385.25919K562TAF15
chr1228271427228271478+intron-Distal3.750036.31832K562HNRNPM
chr1228278450228278524+intron-Distal3.123716.44281K562EWSR1
chr1228285208228285232+intron-Distal,intron-Proximal4.376855.32062K562EFTUD2
chr1228275870228275956+intron-Distal3.189127.23169K562CSTF2T
chr1228270656228270705+intron-Distal3.424147.41315K562CSTF2T
chr1228285514228285551+intron-Distal,intron-Proximal3.509705.82046K562SF3B4
chr1228276852228276939+intron-Distal3.061018.14754K562DROSHA
chr1228273536228273584+intron-Distal3.892503.01989K562TAF15
chr1228282831228282907+intron-Distal4.297803.96879HepG2MATR3
chr1228278094228278138+intron-Distal3.229744.67419K562FUS
chr1228271576228271641+intron-Distal4.8667812.14324K562HNRNPM
chr1228277334228277386+intron-Distal3.776276.92611K562EWSR1
chr1228276017228276093+intron-Distal,intron-Proximal3.272153.42802K562HNRNPM
chr1228276955228277024+intron-Distal4.6188211.42411K562EWSR1
chr1228277097228277151+intron-Distal3.396916.10287K562NONO
chr1228271280228271395+intron-Distal,intron-Proximal4.0706313.67191K562EWSR1
chr1228271826228271885+intron-Distal4.011083.57189K562ILF3
chr1228281020228281096+intron-Distal3.483796.15110K562EWSR1
chr1228271432228271481+intron-Distal5.8096513.93568K562NONO
chr1228283902228283952+intron-Distal3.611194.08493K562HNRNPM
chr1228276066228276176+intron-Distal,intron-Proximal3.232644.50064HepG2SFPQ
chr1228283012228283060+intron-Distal4.830546.58779K562EWSR1
chr1228276867228276955+intron-Distal5.4818221.89293K562EWSR1
chr1228276947228276995+intron-Distal4.327175.69052K562FUS
chr1228271776228271833+intron-Distal4.312528.74816K562HNRNPM
chr1228272128228272166+intron-Distal3.936815.54542K562HNRNPM
chr1228279347228279432+intron-Distal3.560135.39069K562TARDBP
chr1228276120228276175+intron-Distal3.523007.53770K562EWSR1
chr1228284163228284194+intron-Distal4.304703.54147K562HNRNPM
chr1228278464228278526+intron-Distal3.504708.27795K562FUS
chr1228282819228282901+intron-Distal3.490138.20361K562PTBP1
chr1228271276228271304+intron-Distal,intron-Proximal4.640796.64314K562CSTF2T
chr1228276817228276845+intron-Distal3.043173.23466HepG2CSTF2T
chr1228275881228275958+intron-Distal4.0207710.76744K562EWSR1
chr1228271255228271348+intron-Distal,intron-Proximal3.203183.83825K562EXOSC5
chr1228276113228276170+intron-Distal3.126185.44526K562FUS
chr1228276819228276947+intron-Distal5.9350019.52837K562FUS
chr1228281195228281239+intron-Distal3.496755.15600K562LIN28B
chr1228276815228276931+intron-Distal3.604629.44666K562EXOSC5
chr1228281757228281788+intron-Distal4.110263.98553K562NONO
chr1228276813228276867+intron-Distal4.2687213.15096K562EWSR1
chr1228276860228276922+intron-Distal4.606923.83825K562TAF15
chr1228276117228276206+intron-Distal3.390458.02710K562TAF15
chr1228276407228276432+intron-Distal3.758015.82242K562EWSR1
chr1228271151228271192+intron-Distal,intron-Proximal5.525619.80174K562NONO
chr1228277933228277983+intron-Distal4.472845.11753HepG2CSTF2T
chr1228283470228283516+intron-Distal4.596464.90578HepG2HNRNPM
chr1228271582228271643+intron-Distal5.0160515.78389HepG2HNRNPM
chr1228276119228276149+intron-Distal3.320193.68481HepG2HNRNPM
chr1228278799228278833+intron-Distal,intron-Proximal3.021623.93430K562FUS
chr1228272184228272218+intron-Distal4.389794.80399K562EXOSC5
chr1228277094228277172+intron-Distal3.1167210.34542K562EWSR1
chr1228284245228284315+intron-Distal,intron-Proximal3.729466.66781HepG2HNRNPM
chr1228271723228271767+intron-Distal4.5340516.00317HepG2HNRNPM
chr1228284361228284455+intron-Distal3.080614.97937HepG2HNRNPM
chr1228276117228276169+intron-Distal5.248026.62732K562HNRNPM
chr1228278168228278214+intron-Distal3.193544.30647K562FUS
chr1228271643228271711+intron-Distal5.4262214.75205HepG2HNRNPM
chr1228270636228270714+intron-Distal,intron-Proximal3.209184.61952HepG2FAM120A
chr1228277457228277510+intron-Distal3.014248.39572K562EWSR1
chr1228279255228279347+intron-Distal4.272386.68220K562TARDBP
chr1228271331228271415+intron-Distal4.9599812.93967K562NONO
chr1228276857228276925+intron-Distal3.962683.84437HepG2PRPF4
chr1228271703228271774+intron-Distal3.385063.91899K562EXOSC5
chr1228271077228271175+intron-Distal,intron-Proximal4.3305811.23387K562EXOSC5
chr1228271776228271839+intron-Distal4.9714711.53777HepG2HNRNPM
chr1228277891228277895+intron-Distal4.264913.87357K562EWSR1
chr1228276019228276073+intron-Distal,intron-Proximal4.794357.33949K562FUS
chr1228281699228281744+intron-Distal3.076734.40213K562EWSR1
chr1228283013228283063+intron-Distal3.796776.00014K562CSTF2T
chr1228272120228272173+intron-Distal3.881416.91468HepG2HNRNPM
chr1228281789228281850+intron-Distal3.625944.14399K562LSM11
chr1228278649228278691+intron-Distal3.814075.78672K562HNRNPM
chr1228276954228276995+intron-Distal3.419326.87667K562CSTF2T
chr1228270606228270638+intron-Distal,intron-Proximal4.743315.80843K562CSTF2T
chr1228275763228275814+intron-Distal3.713774.71062K562TAF15
chr1228276734228276775+intron-Distal3.026836.05072K562CSTF2T
chr1228284364228284425+intron-Distal3.588225.59281K562HNRNPM
chr1228276512228276609+intron-Distal3.495654.23271HepG2HNRNPM
chr1228276808228276859+intron-Distal4.698934.06667K562GTF2F1
chr1228276634228276692+intron-Distal4.3259810.48798K562CSTF2T
chr1228271083228271151+intron-Distal,intron-Proximal4.9657419.18632K562NONO
chr1228270660228270708+intron-Distal3.544644.98988K562NONO
chr1228272846228272931+intron-Distal3.650778.28344K562HNRNPM
chr1228276639228276687+intron-Distal3.360624.86331K562HNRNPM
chr1228278642228278688+intron-Distal3.169614.97523HepG2HNRNPM
chr1228280400228280434+intron-Distal4.163163.76710K562NONO
chr1228285161228285188+intron-Distal,intron-Proximal4.337874.21433K562PRPF8
chr1228271491228271549+intron-Distal3.645966.75693K562NONO
chr1228279861228279904+intron-Distal3.908719.06546K562FMR1
chr1228278806228278869+intron-Distal,intron-Proximal4.799434.95911K562TAF15
chr1228278167228278213+intron-Distal4.702165.91582K562NONO
chr1228282835228282897+intron-Distal3.101684.82768K562MATR3
chr1228271641228271715+intron-Distal5.7590122.55090K562HNRNPM
chr1228282994228283063+intron-Distal3.607844.31658K562EXOSC5
chr1228275881228275997+intron-Distal,intron-Proximal3.207727.66500K562FUS
chr1228280245228280305+intron-Distal3.272663.18845HepG2HNRNPM
chr1228271716228271776+intron-Distal4.8161420.45646K562HNRNPM
chr1228276625228276688+intron-Distal3.016184.02446K562NONO
chr1228272844228272925+intron-Distal4.5478112.72001HepG2HNRNPM
chr1228276830228276919+intron-Distal3.172623.93339HepG2FUS
chr1228271253228271328+intron-Distal,intron-Proximal5.352009.31104K562NONO
chr1228284247228284304+intron-Distal,intron-Proximal3.421934.61999K562HNRNPM
chr1228276034228276080+intron-Distal,intron-Proximal3.410703.43829K562EXOSC5
chr1228276115228276173+intron-Distal3.9278610.45965K562CSTF2T
chr1228278467228278528+intron-Distal3.618286.90704K562TAF15
chr1228271707228271754+intron-Distal4.270355.32682K562FUS
chr1228276807228276865+intron-Distal3.9163012.05154K562CSTF2T
chr1228270557228270572+intron-Distal,intron-Proximal3.2895610.03147K562TIA1
chr1228276817228276843+intron-Distal3.981883.53896K562NONO
chr1228276972228277013+intron-Distal4.482664.23759K562NONO
chr1228270594228270702+intron-Distal,intron-Proximal3.893933.25631HepG2PRPF4
chr1228276865228276950+intron-Distal4.5784722.33489K562CSTF2T
chr1228284999228285038+intron-Proximal3.739726.26407K562SF3B4
chr1228284997228285028+intron-Proximal4.192203.83824K562BUD13
chr1228284995228285032+intron-Proximal5.4541948.90920K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARF1 is not available on ENCORE database.

  • 102 RBPs can affect the levels of ARF1.  








The Knockdown/knockout RNA-Seq assay for ARF1 is not available on ENCORE database.





102 RBPs can affect the gene expression of ARF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARF1ENSG00000143761.92194.876302935.61330-0.419504.573603.22780HepG2AATF
ARF1ENSG00000143761.94322.698104882.79870-0.175802.500901.91790HepG2ACO1
ARF1ENSG00000143761.92335.492102944.26500-0.334202.740301.74610HepG2ADAR
ARF1ENSG00000143761.92929.898204427.42040-0.595606.513404.95980HepG2AKAP8
ARF1ENSG00000143761.94016.602504905.32530-0.288404.941903.94340HepG2AKAP8L
ARF1ENSG00000143761.93937.647405442.81890-0.467004.392303.41160HepG2ASCC1
ARF1ENSG00000143761.92217.924303346.60970-0.5935010.734609.36750HepG2CALR
ARF1ENSG00000143761.94532.734705980.73090-0.399902.729301.76100HepG2CCAR1
ARF1ENSG00000143761.92736.528603549.92600-0.375403.695902.91330HepG2CPSF6
ARF1ENSG00000143761.93656.691803019.327400.276203.630402.46380HepG2YBX3
ARF1ENSG00000143761.92184.315003006.51080-0.460903.099001.63280HepG2CSTF2T
ARF1ENSG00000143761.95665.440404845.447300.225503.274202.58680HepG2CELF1
ARF1ENSG00000143761.96080.821605209.464900.223004.823103.88460HepG2DAZAP1
ARF1ENSG00000143761.92091.031003169.20970-0.5999010.367608.64690HepG2DDX24
ARF1ENSG00000143761.91945.209504031.22560-1.051309.099207.39470HepG2DDX59
ARF1ENSG00000143761.92223.284502859.46640-0.363103.653902.53430HepG2DHX30
ARF1ENSG00000143761.93555.834104671.38640-0.393708.710307.64290HepG2DKC1
ARF1ENSG00000143761.93390.183602938.600200.206103.306502.60500HepG2DNAJC2
ARF1ENSG00000143761.91995.677302982.11880-0.579504.954403.46970HepG2AGO1
ARF1ENSG00000143761.92286.883803139.17540-0.457004.494203.36450HepG2EIF3D
ARF1ENSG00000143761.92193.653003057.87050-0.479206.995705.40470HepG2EIF3G
ARF1ENSG00000143761.94056.072105139.95710-0.341706.213805.04950HepG2EIF4G1
ARF1ENSG00000143761.93627.465504923.66020-0.440804.813703.75710HepG2EIF4G2
ARF1ENSG00000143761.93776.479904849.04380-0.360703.913502.63240HepG2ESF1
ARF1ENSG00000143761.95009.805507659.73320-0.6125022.7217021.28000HepG2ETF1
ARF1ENSG00000143761.94066.769605652.96960-0.475104.542303.57350HepG2FIP1L1
ARF1ENSG00000143761.92625.816104222.70190-0.6854012.9772011.33170HepG2FUBP3
ARF1ENSG00000143761.93321.255805382.20250-0.696508.823107.67000HepG2G3BP1
ARF1ENSG00000143761.94106.142405715.57120-0.477104.409803.27430HepG2G3BP2
ARF1ENSG00000143761.93710.203804661.37290-0.329306.334204.93210HepG2HDGF
ARF1ENSG00000143761.95325.814104711.141200.176802.371001.70340HepG2HNRNPF
ARF1ENSG00000143761.95511.153104745.247700.215804.611003.75840HepG2HNRNPL
ARF1ENSG00000143761.93044.344303840.11890-0.335002.870802.23100HepG2HNRNPLL
ARF1ENSG00000143761.93159.761303899.64600-0.303503.418802.37110HepG2HNRNPM
ARF1ENSG00000143761.93973.707804463.18050-0.167602.571501.58700HepG2KIF1C
ARF1ENSG00000143761.94652.104005837.51010-0.327502.357301.77200HepG2MATR3
ARF1ENSG00000143761.92421.425103285.29720-0.440202.928901.84640HepG2METAP2
ARF1ENSG00000143761.93733.545104574.09520-0.292903.310302.42950HepG2MSI2
ARF1ENSG00000143761.92734.442603916.85440-0.518403.360602.28490HepG2MTPAP
ARF1ENSG00000143761.92467.594503405.14340-0.464605.355504.33060HepG2NSUN2
ARF1ENSG00000143761.94219.890505531.05230-0.390308.864507.87890HepG2PCBP1
ARF1ENSG00000143761.91756.196502596.05390-0.5639010.156607.99010HepG2PKM
ARF1ENSG00000143761.92875.607003797.97800-0.401408.218306.97930HepG2PRPF4
ARF1ENSG00000143761.94625.776305628.26270-0.283004.731904.05870HepG2PTBP1
ARF1ENSG00000143761.97016.540205234.979000.4225013.4091012.31000HepG2PUM1
ARF1ENSG00000143761.94442.062904973.37430-0.163002.209701.64470HepG2PUS1
ARF1ENSG00000143761.94761.720806095.09950-0.356205.507804.67120HepG2QKI
ARF1ENSG00000143761.94843.541205751.93990-0.248002.659901.81700HepG2RBM15
ARF1ENSG00000143761.95004.192606402.06840-0.355406.389205.67960HepG2RBM22
ARF1ENSG00000143761.94809.383706263.54140-0.381108.613907.75690HepG2NELFE
ARF1ENSG00000143761.94294.240205833.95440-0.4421011.4436010.31920HepG2RECQL
ARF1ENSG00000143761.94135.194705074.74550-0.295402.495501.84110HepG2RPLP0
ARF1ENSG00000143761.92024.857303054.75150-0.593209.975708.89710HepG2RPS19
ARF1ENSG00000143761.94458.664202945.266200.5981022.4584020.87080HepG2SAFB2
ARF1ENSG00000143761.94487.375905859.37100-0.384908.892407.92400HepG2SF3B4
ARF1ENSG00000143761.95611.309804728.732700.246805.740004.79080HepG2SLBP
ARF1ENSG00000143761.94595.882503096.161700.569803.231402.18700HepG2SMNDC1
ARF1ENSG00000143761.97996.270507230.810200.145101.800001.36950HepG2SRFBP1
ARF1ENSG00000143761.93528.182704975.88010-0.4960014.6344013.54480HepG2SRSF9
ARF1ENSG00000143761.93801.742406277.89730-0.7236031.6770030.37470HepG2SSB
ARF1ENSG00000143761.94739.534703816.256400.312503.088102.10020HepG2SUPT6H
ARF1ENSG00000143761.92380.745303586.64010-0.591207.139906.13400HepG2SUPV3L1
ARF1ENSG00000143761.92948.933705497.78790-0.8987022.3610020.98420HepG2TAF15
ARF1ENSG00000143761.94042.249005051.26510-0.321503.808802.83590HepG2TIA1
ARF1ENSG00000143761.91629.830103213.53990-0.9794028.8394027.54110HepG2TIAL1
ARF1ENSG00000143761.94086.246504775.37460-0.224803.624602.84100HepG2UPF1
ARF1ENSG00000143761.92955.376703748.08270-0.342807.941306.90210HepG2ZC3H8
ARF1ENSG00000143761.96804.429608255.96210-0.279002.859701.65660K562AARS
ARF1ENSG00000143761.926461.5569015129.674800.8064029.2695027.52340K562AGGF1
ARF1ENSG00000143761.911643.277609858.079400.240002.844901.32020K562AKAP1
ARF1ENSG00000143761.920810.0252016626.376700.323703.839902.64130K562AKAP8
ARF1ENSG00000143761.923748.4212015743.395600.593008.607507.39130K562AKAP8L
ARF1ENSG00000143761.924669.4419014392.882300.7773017.5320016.21940K562AQR
ARF1ENSG00000143761.920208.4803016519.146900.290702.539101.66620K562ATP5C1
ARF1ENSG00000143761.96783.505105840.775200.215802.634901.60610K562CSTF2
ARF1ENSG00000143761.98511.993206750.613500.334406.679104.62800K562DDX27
ARF1ENSG00000143761.99645.0596012226.35140-0.342105.831304.93650K562DDX47
ARF1ENSG00000143761.912054.7676010127.917000.251203.642102.08560K562DDX6
ARF1ENSG00000143761.920493.7276016939.245700.274703.427202.43820K562DKC1
ARF1ENSG00000143761.98244.266906518.559000.338702.673901.77730K562EFTUD2
ARF1ENSG00000143761.913294.5094017355.31010-0.384508.180506.58590K562EIF4G2
ARF1ENSG00000143761.911626.057009110.189300.351706.092904.02360K562EWSR1
ARF1ENSG00000143761.910570.913207004.689600.593609.682107.98760K562FIP1L1
ARF1ENSG00000143761.95964.724907845.31120-0.395403.711102.37790K562FKBP4
ARF1ENSG00000143761.95326.626706660.26780-0.322403.060502.15650K562FMR1
ARF1ENSG00000143761.92339.084805200.75390-1.152806.719705.51270K562G3BP2
ARF1ENSG00000143761.97492.535906249.838600.261502.456001.70560K562GPKOW
ARF1ENSG00000143761.919045.5209011444.553100.734703.788902.28420K562HNRNPA2B1
ARF1ENSG00000143761.97576.269409030.08980-0.253302.689802.09980K562HNRNPC
ARF1ENSG00000143761.98216.819405761.676300.512005.424304.06540K562HNRNPM
ARF1ENSG00000143761.912427.995209496.564600.388004.483803.47670K562HSPD1
ARF1ENSG00000143761.912022.624807810.987700.622103.758302.49220K562IGF2BP2
ARF1ENSG00000143761.99755.055307943.463700.296302.851801.63790K562IGF2BP3
ARF1ENSG00000143761.922502.0544016706.685100.429507.308505.80730K562KIF1C
ARF1ENSG00000143761.922267.6473015993.213600.477404.237802.82440K562MAK16
ARF1ENSG00000143761.918004.3903013118.539700.456603.801102.72330K562NAA15
ARF1ENSG00000143761.910660.9623011712.98480-0.135802.908902.14660K562NSUN2
ARF1ENSG00000143761.921226.8244010008.771201.084507.811705.85400K562PABPN1
ARF1ENSG00000143761.910227.875908022.601900.350304.753702.94390K562PCBP1
ARF1ENSG00000143761.98960.2624013325.79170-0.572607.134304.54300K562PKM
ARF1ENSG00000143761.912070.794807952.024300.602009.282207.54450K562PPIG
ARF1ENSG00000143761.920848.3759011897.377800.809204.038902.15130K562PPP1R8
ARF1ENSG00000143761.98763.099906343.361100.466104.838503.84930K562PRPF8
ARF1ENSG00000143761.916291.9713019733.87450-0.276505.421204.05670K562PUM2
ARF1ENSG00000143761.928794.6977015611.104700.8831015.1937013.96240K562PUS1
ARF1ENSG00000143761.924099.8188015212.346900.663708.638607.61640K562RBM15
ARF1ENSG00000143761.93831.905206459.92440-0.753506.990205.67860K562RPS19
ARF1ENSG00000143761.915849.761109152.140300.792203.727602.26600K562SF1
ARF1ENSG00000143761.97300.159405402.788200.434102.810901.94860K562SF3B4
ARF1ENSG00000143761.93595.527104550.59870-0.339903.907601.92870K562SND1
ARF1ENSG00000143761.916553.4447010512.440800.654902.779001.54660K562SNRNP200
ARF1ENSG00000143761.910407.3055011841.60620-0.186303.702802.63930K562SRPK2
ARF1ENSG00000143761.912055.800207816.148100.6251010.446609.08690K562SRSF1
ARF1ENSG00000143761.910544.359707382.703700.514207.118405.32130K562SRSF5
ARF1ENSG00000143761.910836.869807909.632800.454204.217703.33810K562TARDBP
ARF1ENSG00000143761.911137.242707629.949200.545505.170303.99940K562TIA1
ARF1ENSG00000143761.94569.850407787.56940-0.769008.862607.11650K562TIAL1
ARF1ENSG00000143761.911103.876707489.188100.568103.748602.44810K562TRA2A
ARF1ENSG00000143761.924249.0439015830.080500.615203.434601.94210K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARF1 is not available on ENCORE database.





4 RBPs can affect the splicing of ARF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARF1ENSG00000143761.9chr1+2282841512282842052282704912282705512282847782282849630.203000.006740.05938includedK562AQR
SEARF1ENSG00000143761.9chr1+228284151228284205228270491228270551228284778228284933-0.402000.000980.05041excludedK562EFTUD2
A5SSARF1ENSG00000143761.9chr1+2282703602282705512282703602282704662282847782282849630.144000.000000.00053longerHepG2SFPQ
A5SSARF1ENSG00000143761.9chr1+2282703602282705512282703602282704662282847782282849630.089000.000190.03010longerHepG2FTO
RIARF1ENSG00000143761.9chr1+2282847782282851532282847782282849632282850422282851530.087000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARF1 is not avaliable on ENCORE database.