SEC13

General Information

Gene Name       : SEC13
Gene ID             : ENSG00000157020.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SEC13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SEC13ENSG00000157020.1737.6091.0064.30ENCSR000AEF
HepG2SEC13ENSG00000157020.17307.37189.54248.45ENCSR985KAT
K562SEC13ENSG00000157020.17198.28190.99194.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SEC13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SEC13 RNA is bound by 38 proteins.  







eCLIP assay for SEC13 is not avaliable on ENCORE database.





38 proteins are bound to SEC13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31034275510342803-3'-UTR,CDS,intron-Distal3.659149.70484K562LIN28B
chr31036088210361002-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.925358.92499K562ILF3
chr31034264210342695-3'-UTR,intron-Distal,intron-Proximal3.025695.14024HepG2LARP4
chr31034283310342955-3'-UTR,CDS,intron-Distal3.932397.86922HepG2RPS3
chr31034264110342714-3'-UTR,intron-Distal,intron-Proximal6.7268563.41117HepG2SUB1
chr31034272610342755-3'-UTR,intron-Distal3.316738.12189K562LIN28B
chr31034280710342896-3'-UTR,CDS,intron-Distal3.812187.46291K562IGF2BP1
chr31036093610360987-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.635803.97268K562PTBP1
chr31034287510342945-3'-UTR,intron-Distal3.0052310.67334K562RPS3
chr31036096010361015-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.121703.76090HepG2U2AF2
chr31034271410342805-3'-UTR,CDS,intron-Distal8.6459776.38995HepG2SUB1
chr31034272910342810-3'-UTR,CDS,intron-Distal3.4468418.96924K562PUM2
chr31034270710342772-3'-UTR,intron-Distal3.7084021.34699K562YBX3
chr31034286310343058-3'-UTR,CDS,intron-Distal3.0060414.95924HepG2G3BP1
chr31036087710361004-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.259348.13776K562CSTF2T
chr31034264910342719-3'-UTR,intron-Distal6.0402918.70378K562NOLC1
chr31036230110362353-5'-UTR,intron-Distal3.118723.41665HepG2GRWD1
chr31036271110362773-5'-UTR,CDS,intron-Distal,intron-Proximal3.242633.98531K562SRSF7
chr31036248210362517-5'-UTR,intron-Distal4.1738511.44407HepG2RBM22
chr31035973210359760-5'-UTR,CDS,intron-Distal,intron-Proximal3.087536.12311K562DDX3X
chr31036246810362534-5'-UTR,intron-Distal4.016147.75469HepG2EFTUD2
chr31036272710362733-5'-UTR,intron-Distal,intron-Proximal3.734827.95036K562AQR
chr31036268710362731-5'-UTR,intron-Distal,intron-Proximal4.338965.94114HepG2BUD13
chr31036272710362787-5'-UTR,CDS,intron-Distal,intron-Proximal4.633446.48758K562DROSHA
chr31036269710362791-5'-UTR,CDS,intron-Distal,intron-Proximal3.018283.73972HepG2UCHL5
chr31036273110362796-5'-UTR,CDS,intron-Distal,intron-Proximal3.6508512.21200K562DDX3X
chr31036216910362248-5'-UTR,intron-Distal3.303105.34585K562CSTF2T
chr31036251710362530-5'-UTR,intron-Distal4.2524210.49169HepG2RBM22
chr31036273310362790-5'-UTR,CDS,intron-Distal,intron-Proximal4.460426.63665K562GEMIN5
chr31036270910362727-5'-UTR,intron-Distal,intron-Proximal3.670189.84476K562AQR
chr31036263210362684-5'-UTR,intron-Distal3.604554.24353K562DDX21
chr31035976010359779-5'-UTR,CDS,intron-Distal,intron-Proximal3.9296412.98309K562DDX3X
chr31036266710362762-5'-UTR,CDS,intron-Distal,intron-Proximal3.6412616.94279HepG2PRPF8
chr31036256410362602-5'-UTR,intron-Distal4.151973.73331K562RBM15
chr31036269010362709-5'-UTR,intron-Distal4.0567510.08968K562AQR
chr31034724910347273-CDS,intron-Distal3.1980311.88642K562YBX3
chr31035698910357012-CDS,intron-Distal,intron-Proximal4.420578.60557HepG2AQR
chr31035364810353655-CDS,intron-Distal,intron-Proximal3.8044911.48475K562YBX3
chr31035372210353754-CDS,intron-Distal5.2555453.82725K562RPS3
chr31034295810343049-CDS,intron-Distal3.618989.42203K562METAP2
chr31035367110353777-CDS,intron-Distal3.171478.97294K562METAP2
chr31034724210347251-CDS,intron-Distal,intron-Proximal4.096206.53930HepG2G3BP1
chr31034718710347278-CDS,intron-Distal,intron-Proximal4.3240711.17766HepG2PRPF8
chr31035368710353783-CDS,intron-Distal,intron-Proximal3.9805719.62195HepG2RPS3
chr31034671910346796-CDS,intron-Distal,intron-Proximal3.5643615.56989K562METAP2
chr31034296610342974-CDS,intron-Distal3.8765015.21392K562YBX3
chr31034727310347285-CDS,intron-Distal3.6929313.19698K562YBX3
chr31035435310354475-CDS,intron-Distal,intron-Proximal3.2377716.60762HepG2BUD13
chr31034570910345773-CDS,intron-Distal,intron-Proximal3.200326.18896HepG2RPS3
chr31035437810354481-CDS,intron-Distal,intron-Proximal4.4486018.01236HepG2AQR
chr31035440910354414-CDS,intron-Distal3.010438.97167K562YBX3
chr31034299710343029-CDS,intron-Distal3.404486.87923HepG2SUB1
chr31034680610346838-CDS,intron-Distal,intron-Proximal3.137957.42133K562SF3B4
chr31034671610346792-CDS,intron-Distal,intron-Proximal3.337743.24143K562SND1
chr31034736910347376-CDS,intron-Distal3.577689.43370K562YBX3
chr31034728210347327-CDS,intron-Distal3.9467311.95702HepG2YBX3
chr31035694910357021-CDS,intron-Distal,intron-Proximal3.011209.91818HepG2PRPF8
chr31035365510353667-CDS,intron-Distal3.6763110.25575K562YBX3
chr31034679710346874-CDS,intron-Distal,intron-Proximal3.285597.41781HepG2AQR
chr31035364810353671-CDS,intron-Distal,intron-Proximal3.599993.84718K562METAP2
chr31034570910345780-CDS,intron-Distal,intron-Proximal3.3192410.67334K562RPS3
chr31034296810343027-CDS,intron-Distal3.027135.96743K562BUD13
chr31035426010354338-CDS,intron-Distal,intron-Proximal3.878733.40453HepG2SRSF1
chr31034295410343048-CDS,intron-Distal3.062415.39249K562DDX6
chr31034672210346782-CDS,intron-Distal,intron-Proximal4.869729.30334HepG2RPS3
chr31034673110346759-CDS,intron-Distal,intron-Proximal3.3647644.51664K562YBX3
chr31034679610346841-CDS,intron-Distal,intron-Proximal4.0164411.69028K562METAP2
chr31034683810346891-CDS,intron-Distal,intron-Proximal4.7317629.68837K562SF3B4
chr31034727010347358-CDS,intron-Distal4.2781219.65653K562METAP2
chr31034734810347376-CDS,intron-Distal3.991609.24940HepG2YBX3
chr31034732710347348-CDS,intron-Distal5.1944211.29027HepG2YBX3
chr31034730210347313-CDS,intron-Distal3.0378811.57112K562YBX3
chr31034724110347270-CDS,intron-Distal,intron-Proximal3.743439.79855K562METAP2
chr31034570810345726-CDS,intron-Distal,intron-Proximal4.143544.03377HepG2LARP4
chr31035427710354418-CDS,intron-Distal,intron-Proximal4.4487360.97580K562RPS3
chr31034671610346777-CDS,intron-Distal,intron-Proximal4.1406010.72744HepG2G3BP1
chr31035440210354478-CDS,intron-Distal,intron-Proximal3.8673420.04636K562AQR
chr31034297410343010-CDS,intron-Distal4.1527620.05775K562YBX3
chr31034298410343058-CDS,intron-Distal3.3940311.50994K562RPS3
chr31035375410353780-CDS,intron-Distal4.5609110.25818K562RPS3
chr31034736010347419-CDS,intron-Distal,intron-Proximal3.109286.43602K562SF3B4
chr31034580810345856-CDS,intron-Distal3.483025.36360K562METAP2
chr31034724110347290-CDS,intron-Distal,intron-Proximal3.560915.84345K562RPS3
chr31034678610346840-CDS,intron-Distal,intron-Proximal3.336924.13112K562SRSF1
chr31034675910346767-CDS,intron-Distal,intron-Proximal3.0851834.11233K562YBX3
chr31035422110354272-CDS,intron-Distal,intron-Proximal4.546525.32906HepG2AQR
chr31034296910343045-CDS,intron-Distal3.139674.94600K562RBM15
chr31034667410346728-CDS,intron-Distal,intron-Proximal3.368327.02084HepG2PRPF8
chr31034677710346840-CDS,intron-Distal,intron-Proximal4.5326214.97864HepG2G3BP1
chr31035432910354465-CDS,intron-Distal,intron-Proximal3.9288922.25370K562BUD13
chr31034295710343059-CDS,intron-Distal3.3083312.14953K562PABPC4
chr31035367710353722-CDS,intron-Distal5.3444369.16376K562RPS3
chr31035426210354277-CDS,intron-Distal,intron-Proximal4.739226.69883K562RPS3
chr31034296910343059-CDS,intron-Distal3.561868.28098HepG2LARP4
chr31035426010354415-CDS,intron-Distal,intron-Proximal3.7146512.78110HepG2RPS3
chr31034734410347369-CDS,intron-Distal3.3938916.17308K562YBX3
chr31036132710361390-intron-Distal4.530855.31905K562ILF3
chr31036112810361243-intron-Distal3.267293.71597K562MATR3
chr31036193210361982-intron-Distal3.144343.01436K562CSTF2T
chr31036151210361687-intron-Distal6.9829227.75544HepG2PCBP2
chr31035979010359895-intron-Distal,intron-Proximal3.454536.62338K562TARDBP
chr31036117510361248-intron-Distal3.344626.59866K562ILF3
chr31035352410353595-intron-Distal,intron-Proximal3.876853.69252K562EFTUD2
chr31034484210344936-intron-Distal4.255335.27745HepG2ILF3
chr31036139010361474-intron-Distal4.303059.39715K562ILF3
chr31034719410347240-intron-Distal,intron-Proximal3.666184.38107K562AQR
chr31035588910355975-intron-Distal5.6960222.38685K562LIN28B
chr31035690310356957-intron-Distal,intron-Proximal4.8460212.35151K562AQR
chr31036114410361280-intron-Distal3.103579.42676K562CSTF2T
chr31036146010361563-intron-Distal4.311149.21479HepG2PTBP1
chr31035655510356638-intron-Distal,intron-Proximal3.460043.39414K562HNRNPA1
chr31035978010359827-intron-Distal,intron-Proximal4.900684.40745K562SF3B4
chr31036133010361455-intron-Distal4.4073315.96236K562CSTF2T
chr31034745910347656-intron-Distal,intron-Proximal3.750775.73360HepG2CSTF2
chr31034666710346713-intron-Distal,intron-Proximal5.395796.75320K562AQR
chr31034478010344852-intron-Distal3.842564.59821K562ILF3
chr31034977910349881-intron-Distal3.486624.56430K562SAFB
chr31035696210356989-intron-Distal,intron-Proximal5.4205710.32702HepG2AQR
chr31035378710353848-intron-Distal,intron-Proximal3.370983.33980HepG2SF3B4
chr31036156310361635-intron-Distal4.824177.11021HepG2PTBP1
chr31034566710345704-intron-Distal,intron-Proximal3.964544.49024K562AQR
chr31034713810347213-intron-Distal,intron-Proximal3.8356210.82143K562EFTUD2
chr31035699510357005-intron-Distal,intron-Proximal5.5594932.42426K562AQR
chr31034695710347002-intron-Distal4.010923.31283K562PRPF8
chr31036113410361165-intron-Distal3.944533.09122HepG2PTBP1
chr31035359910353648-intron-Distal,intron-Proximal3.560865.75231K562AQR
chr31035957510359715-intron-Distal,intron-Proximal4.428256.75344HepG2EFTUD2
chr31036138210361462-intron-Distal5.442894.97123HepG2PCBP2
chr31035696110356995-intron-Distal,intron-Proximal6.3111541.64569K562AQR
chr31036036410360440-intron-Distal3.364373.54074K562RBM15
chr31035957610359731-intron-Distal,intron-Proximal3.010925.77997K562PRPF8
chr31035353210353601-intron-Distal,intron-Proximal3.640159.00309HepG2EFTUD2
chr31036205510362120-intron-Distal3.322594.95687K562CSTF2T
chr31035592810355974-intron-Distal3.999965.47334HepG2LIN28B
chr31034684410346896-intron-Distal,intron-Proximal3.989503.56713HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SEC13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SEC13 is not available on ENCORE database.

  • 128 RBPs can affect the levels of SEC13.  








The Knockdown/knockout RNA-Seq assay for SEC13 is not available on ENCORE database.





128 RBPs can affect the gene expression of SEC13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SEC13ENSG00000157020.131740.436502794.61330-0.683208.684906.90760HepG2AATF
SEC13ENSG00000157020.133381.632604555.28340-0.429804.192803.05000HepG2ABCF1
SEC13ENSG00000157020.131986.168303682.77910-0.8908041.3827039.70820HepG2ACO1
SEC13ENSG00000157020.132068.134702573.85510-0.315602.438301.50100HepG2ADAR
SEC13ENSG00000157020.133147.905307549.79930-1.2620024.9569023.53870HepG2AKAP1
SEC13ENSG00000157020.132608.101803696.97230-0.503303.050501.95880HepG2AKAP8
SEC13ENSG00000157020.132489.962603699.90360-0.5714015.7353014.11670HepG2AKAP8L
SEC13ENSG00000157020.134794.529906246.55670-0.381703.454502.57700HepG2ASCC1
SEC13ENSG00000157020.131579.066502446.93120-0.631902.635002.04940HepG2BOP1
SEC13ENSG00000157020.132357.872002807.26470-0.251702.233501.53570HepG2CALR
SEC13ENSG00000157020.132882.374704419.38330-0.616605.614304.20060HepG2CCAR1
SEC13ENSG00000157020.134702.560105934.74550-0.335702.910202.11710HepG2CIRBP
SEC13ENSG00000157020.133263.752103681.76440-0.173902.524901.88430HepG2CKAP4
SEC13ENSG00000157020.133074.856502639.496700.220202.432301.48090HepG2YBX3
SEC13ENSG00000157020.131460.221201933.97260-0.405404.191802.89820HepG2CSTF2
SEC13ENSG00000157020.131863.831602862.40080-0.619004.229302.41820HepG2CSTF2T
SEC13ENSG00000157020.135641.014004849.167300.218104.607103.68780HepG2DAZAP1
SEC13ENSG00000157020.132044.178503405.94450-0.7365029.5684027.56620HepG2DDX19B
SEC13ENSG00000157020.133082.659102643.100900.221802.425601.34310HepG2DDX1
SEC13ENSG00000157020.132374.313603080.85880-0.375803.880103.09050HepG2DDX21
SEC13ENSG00000157020.132526.395003016.88610-0.256002.287001.46590HepG2DDX24
SEC13ENSG00000157020.135918.165107231.56050-0.289202.119801.56520HepG2DDX3X
SEC13ENSG00000157020.134321.249303526.676800.293002.604101.34380HepG2DDX47
SEC13ENSG00000157020.132181.664302799.77050-0.359904.013302.40880HepG2DDX52
SEC13ENSG00000157020.132439.606203079.12530-0.335902.648501.88910HepG2DDX55
SEC13ENSG00000157020.133412.536406213.41650-0.8645012.3053011.11310HepG2DDX6
SEC13ENSG00000157020.133090.285702568.953100.266505.051604.21190HepG2DNAJC2
SEC13ENSG00000157020.134722.794305971.76180-0.338502.766602.17290HepG2EIF2S1
SEC13ENSG00000157020.132676.737703455.19290-0.368304.573503.08910HepG2EIF2S2
SEC13ENSG00000157020.131734.000602711.61870-0.645007.753806.31020HepG2EIF3D
SEC13ENSG00000157020.131979.830202910.72700-0.556008.887907.17120HepG2EIF3G
SEC13ENSG00000157020.132165.879806598.84750-1.6073038.7515036.41430HepG2EIF4A3
SEC13ENSG00000157020.133586.850406426.14710-0.841209.299008.07680HepG2EIF4B
SEC13ENSG00000157020.133974.444004784.43720-0.267602.815701.97210HepG2EIF4G1
SEC13ENSG00000157020.132741.966703945.70520-0.525106.946805.31260HepG2ESF1
SEC13ENSG00000157020.133348.257006099.81750-0.8654040.6305038.83300HepG2ETF1
SEC13ENSG00000157020.133050.566303598.54290-0.238302.090901.36570HepG2EWSR1
SEC13ENSG00000157020.132094.141604599.63710-1.1352019.8761018.14910HepG2FIP1L1
SEC13ENSG00000157020.134199.208905327.98690-0.343503.977103.04230HepG2FUBP3
SEC13ENSG00000157020.132290.647803216.08530-0.489503.212602.00760HepG2FUS
SEC13ENSG00000157020.134855.372906659.93110-0.455904.803803.90810HepG2FXR1
SEC13ENSG00000157020.133986.720206177.02610-0.631707.556106.48210HepG2G3BP1
SEC13ENSG00000157020.134856.053606559.05960-0.433704.520703.36970HepG2G3BP2
SEC13ENSG00000157020.131944.198702414.33400-0.312402.356401.53720HepG2GEMIN5
SEC13ENSG00000157020.132407.384102968.21750-0.302102.455601.50010HepG2GNB2L1
SEC13ENSG00000157020.131858.711502501.87490-0.428702.462701.41200HepG2GRSF1
SEC13ENSG00000157020.131506.279402910.43450-0.9502020.0594018.36590HepG2HNRNPC
SEC13ENSG00000157020.135068.421306257.21870-0.304002.776902.07790HepG2HNRNPK
SEC13ENSG00000157020.135037.820104417.066700.189603.675202.90590HepG2HNRNPL
SEC13ENSG00000157020.131547.252202429.71560-0.651102.828102.19230HepG2HNRNPLL
SEC13ENSG00000157020.132989.537806278.44330-1.0705022.1328020.44200HepG2IGF2BP2
SEC13ENSG00000157020.132356.547705893.53330-1.322507.681506.10080HepG2IGF2BP3
SEC13ENSG00000157020.133475.883602953.244100.235004.359103.45830HepG2ILF2
SEC13ENSG00000157020.134427.599206315.73070-0.512404.190702.93450HepG2KHSRP
SEC13ENSG00000157020.133705.728404667.81160-0.333002.064901.35600HepG2LARP4
SEC13ENSG00000157020.133671.777906662.26500-0.8595014.1980012.76170HepG2MAGOH
SEC13ENSG00000157020.133584.430706699.23240-0.9023013.9254012.58890HepG2MATR3
SEC13ENSG00000157020.134589.332706856.77630-0.579206.739905.76990HepG2NCBP2
SEC13ENSG00000157020.133638.656104808.45140-0.402206.264805.12060HepG2NOL12
SEC13ENSG00000157020.131735.519202828.13220-0.704504.698503.25130HepG2NONO
SEC13ENSG00000157020.133854.057902470.437300.641503.997402.91810HepG2PABPC1
SEC13ENSG00000157020.133872.462206105.20930-0.656808.534207.28230HepG2PABPC4
SEC13ENSG00000157020.134487.110206659.09200-0.5695018.9859017.62830HepG2PCBP1
SEC13ENSG00000157020.133236.943902578.699700.327903.400702.59070HepG2PPIL4
SEC13ENSG00000157020.131881.255702374.55870-0.336002.812901.99740HepG2PRPF8
SEC13ENSG00000157020.133868.485506775.93490-0.8087035.1993033.69220HepG2PTBP1
SEC13ENSG00000157020.135408.770004590.227900.236602.233701.68950HepG2PUF60
SEC13ENSG00000157020.133896.213304872.89360-0.322706.641805.80600HepG2PUM1
SEC13ENSG00000157020.133738.051304869.23230-0.381405.355204.43630HepG2PUM2
SEC13ENSG00000157020.134409.882303751.118000.233303.925703.21640HepG2PUS1
SEC13ENSG00000157020.135143.663007338.37730-0.5127011.2765010.14200HepG2QKI
SEC13ENSG00000157020.131760.550602936.82940-0.738204.976904.04590HepG2RAVER1
SEC13ENSG00000157020.133837.039704494.65060-0.228202.226101.44670HepG2RBM15
SEC13ENSG00000157020.132496.171005098.29710-1.0303042.3200040.76410HepG2RBM22
SEC13ENSG00000157020.134588.862206660.09730-0.537409.400008.21240HepG2RBM25
SEC13ENSG00000157020.132790.398503507.51100-0.330002.482301.54780HepG2RBM27
SEC13ENSG00000157020.132758.427207540.91530-1.45090109.28240107.18730HepG2NELFE
SEC13ENSG00000157020.133005.406607023.42800-1.2246081.3101078.99360HepG2RECQL
SEC13ENSG00000157020.132721.811404075.36140-0.582408.256807.17600HepG2RPLP0
SEC13ENSG00000157020.131530.219002638.57500-0.7860015.7259014.42650HepG2RPS19
SEC13ENSG00000157020.132350.521203234.64200-0.460604.184903.20930HepG2RPS2
SEC13ENSG00000157020.132551.928603302.09650-0.371802.789501.71150HepG2RPS5
SEC13ENSG00000157020.131607.075402348.85770-0.547505.515404.44030HepG2RRP9
SEC13ENSG00000157020.133718.399202574.699500.5302016.8386015.44570HepG2SAFB2
SEC13ENSG00000157020.132806.897307054.51560-1.3296093.7767091.30380HepG2SF3B4
SEC13ENSG00000157020.135679.736204401.649800.3677011.4394010.17390HepG2SLBP
SEC13ENSG00000157020.132942.467305758.30090-0.9686057.0265055.51210HepG2SRFBP1
SEC13ENSG00000157020.134756.500607363.43070-0.6305026.4211025.28590HepG2SRSF1
SEC13ENSG00000157020.131538.052102588.08240-0.750802.949201.91000HepG2SRSF3
SEC13ENSG00000157020.133026.855104532.37800-0.5824011.1639010.02000HepG2SRSF5
SEC13ENSG00000157020.132333.486405990.58080-1.36020100.3546098.06050HepG2SRSF9
SEC13ENSG00000157020.132772.200904010.83560-0.532903.127301.76620HepG2SSRP1
SEC13ENSG00000157020.134120.456305154.39410-0.323006.267305.40020HepG2SUCLG1
SEC13ENSG00000157020.131467.439403065.00780-1.0626018.6026017.11560HepG2SUPV3L1
SEC13ENSG00000157020.133256.634106618.66020-1.0232043.7572041.87780HepG2TAF15
SEC13ENSG00000157020.134616.127006081.51810-0.397705.641004.45970HepG2TIA1
SEC13ENSG00000157020.134030.053302834.456200.5076013.9446012.81610HepG2TRIM56
SEC13ENSG00000157020.132938.075804053.92760-0.464408.592107.63140HepG2UTP3
SEC13ENSG00000157020.131457.878702889.48180-0.986909.988407.70920HepG2XRCC5
SEC13ENSG00000157020.131108.464003081.63890-1.4751099.9109097.18920HepG2ZC3H8
SEC13ENSG00000157020.133387.058004618.05210-0.447309.092708.24780HepG2ZNF622
SEC13ENSG00000157020.1310564.705807811.299500.435503.268802.66140K562AGGF1
SEC13ENSG00000157020.135869.246504932.698700.250703.543501.81360K562AKAP1
SEC13ENSG00000157020.1311855.026408584.445700.465604.299503.01640K562AKAP8
SEC13ENSG00000157020.1313523.581108128.259200.7344011.307209.86240K562AKAP8L
SEC13ENSG00000157020.1312783.098308528.969400.583706.182804.74990K562ATP5C1
SEC13ENSG00000157020.132266.627303011.74400-0.410104.018202.69940K562CCAR1
SEC13ENSG00000157020.136805.748505296.133500.361704.144201.93910K562DDX24
SEC13ENSG00000157020.133757.032203232.980300.216602.780601.45470K562DDX27
SEC13ENSG00000157020.136033.445404998.281200.271502.921601.84900K562DDX3X
SEC13ENSG00000157020.136688.138305067.660500.400207.679505.21380K562DDX6
SEC13ENSG00000157020.132578.986803371.64160-0.386603.392001.90460K562DHX30
SEC13ENSG00000157020.1311445.428708745.033600.388102.793901.91520K562DKC1
SEC13ENSG00000157020.136374.841605490.457600.215403.130601.83160K562EIF2S1
SEC13ENSG00000157020.133689.965404529.30110-0.295704.471403.58460K562EIF2S2
SEC13ENSG00000157020.132196.850403063.46530-0.479702.747901.74920K562EIF3A
SEC13ENSG00000157020.135715.967707734.81650-0.436404.330703.16390K562EIF4G2
SEC13ENSG00000157020.135565.330504558.403400.287803.839802.28610K562EWSR1
SEC13ENSG00000157020.134267.421803091.590800.464905.786204.52910K562FIP1L1
SEC13ENSG00000157020.132660.722803870.30780-0.540605.951104.18740K562FKBP4
SEC13ENSG00000157020.133708.685605430.75440-0.5502014.1292012.86580K562FXR1
SEC13ENSG00000157020.131670.252203578.26210-1.099207.624606.32860K562G3BP2
SEC13ENSG00000157020.133741.568202360.499500.6645011.430809.79180K562GPKOW
SEC13ENSG00000157020.137405.288706035.620100.295003.181602.37340K562GRSF1
SEC13ENSG00000157020.132703.318304456.15510-0.7211015.2126013.89620K562HNRNPC
SEC13ENSG00000157020.134126.262302543.082600.698208.961507.10520K562HNRNPM
SEC13ENSG00000157020.135925.781804454.802700.411502.513201.55050K562IGF2BP2
SEC13ENSG00000157020.135940.316404529.952100.390903.570902.17660K562IGF2BP3
SEC13ENSG00000157020.1311889.093508625.245100.462904.194303.15200K562KIF1C
SEC13ENSG00000157020.133311.675304678.88980-0.498602.925202.06030K562MAGOH
SEC13ENSG00000157020.1311748.369808257.187200.508603.684102.38220K562MAK16
SEC13ENSG00000157020.139587.049106772.841400.501204.125902.98990K562NAA15
SEC13ENSG00000157020.136618.649205214.413100.343904.905903.26450K562NCBP2
SEC13ENSG00000157020.134756.329205251.14330-0.142802.447501.74140K562NSUN2
SEC13ENSG00000157020.1311385.187405813.405500.969606.472804.77240K562PABPN1
SEC13ENSG00000157020.136076.224004574.985000.409304.208902.51960K562PCBP1
SEC13ENSG00000157020.133879.303705405.67230-0.478704.846903.74920K562PCBP3
SEC13ENSG00000157020.133067.348204146.27910-0.434806.658805.42710K562POLR2G
SEC13ENSG00000157020.135377.458503509.862800.615409.246007.51320K562PPIG
SEC13ENSG00000157020.1311064.319406911.586600.678703.104901.52780K562PPP1R8
SEC13ENSG00000157020.133882.963702978.987400.382203.156102.35490K562PRPF8
SEC13ENSG00000157020.136927.859708978.63420-0.374103.279702.11370K562PUM1
SEC13ENSG00000157020.137050.274108794.70440-0.319003.138802.11830K562PUM2
SEC13ENSG00000157020.1313845.407308059.229300.780607.767306.90410K562PUS1
SEC13ENSG00000157020.1313387.657407853.974600.769307.069306.15060K562RBM15
SEC13ENSG00000157020.134393.086703390.737100.373502.861001.50600K562RBM25
SEC13ENSG00000157020.133275.691904585.96790-0.485403.830002.51840K562NELFE
SEC13ENSG00000157020.133882.626403033.697000.355902.442301.67590K562RPS19
SEC13ENSG00000157020.133408.316904459.79650-0.387903.655202.48530K562RPS3
SEC13ENSG00000157020.1310967.615205316.562501.044606.111704.10810K562SF1
SEC13ENSG00000157020.132686.998303317.14060-0.303902.525701.32360K562SLBP
SEC13ENSG00000157020.134745.855705308.83660-0.161702.396401.51680K562SRPK2
SEC13ENSG00000157020.135888.266604210.094300.483905.001003.51360K562SRSF5
SEC13ENSG00000157020.133445.184004158.90320-0.271602.628701.83110K562SYNCRIP
SEC13ENSG00000157020.135795.175804350.631700.413502.510801.73600K562TIA1
SEC13ENSG00000157020.136053.852504270.943000.503202.685401.61160K562TRA2A
SEC13ENSG00000157020.134983.023804083.313600.287202.564001.66040K562TRIM56
SEC13ENSG00000157020.137000.978405941.247500.236703.890502.37890K562TROVE2
SEC13ENSG00000157020.136995.490805567.910000.329207.760006.63170K562UPF1
SEC13ENSG00000157020.1313010.749708173.012600.670704.188502.48510K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SEC13 is not available on ENCORE database.





21 RBPs can affect the splicing of SEC13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESEC13ENSG00000157020.13chr3-1034293610343058103426331034283110345709103458560.091000.000010.01152includedK562IGF2BP2
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.099000.000230.00630excludedK562SRSF1
SESEC13ENSG00000157020.13chr3-1034293610343058103426331034283110345709103458560.064000.003130.05157includedK562SF3B4
SESEC13ENSG00000157020.13chr3-103608221036100010359733103597781036273310362770-0.323000.000080.00265excludedK562SF3B4
SESEC13ENSG00000157020.13chr3-1036219210362348103597331035977810362733103627770.427000.000520.07528includedK562MATR3
SESEC13ENSG00000157020.13chr3-103621921036234810359733103597781036273310362777-0.139000.002630.06540excludedK562AKAP8L
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.103000.000110.01516excludedK562XRCC6
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.056000.005190.09864excludedHepG2HNRNPK
SESEC13ENSG00000157020.13chr3-1036219210362377103609401036100010362733103627700.746000.003190.03215includedK562AQR
SESEC13ENSG00000157020.13chr3-1034293610343058103426331034283110345709103458560.073000.000120.00200includedK562AQR
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.173000.000000.00000excludedK562FXR1
SESEC13ENSG00000157020.13chr3-103621921036234810359733103597781036273310362777-0.285000.000010.03211excludedK562EWSR1
SESEC13ENSG00000157020.13chr3-103608221036100010359733103597781036273310362770-0.150000.000100.00241excludedK562PUS1
SESEC13ENSG00000157020.13chr3-1036082210361000103597331035977810362733103627700.399000.000040.02699includedK562KHSRP
SESEC13ENSG00000157020.13chr3-1036094010361000103597511035977810362192103627420.262000.000640.03572includedHepG2PTBP1
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.098000.000020.00788excludedK562APOBEC3C
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.220000.000000.00000excludedHepG2SRSF1
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.093000.000010.00072excludedHepG2PCBP1
SESEC13ENSG00000157020.13chr3-103608221036100010359733103597781036273310362770-0.331000.001810.07503excludedHepG2PCBP1
SESEC13ENSG00000157020.13chr3-1036219210362348103597331035977810362733103627770.391000.001470.02733includedK562U2AF2
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.085000.001210.04368excludedK562TARDBP
SESEC13ENSG00000157020.13chr3-1036082210361000103597331035977810362733103627700.537000.000020.00154includedK562PTBP1
SESEC13ENSG00000157020.13chr3-103429361034305810342633103428311034570910345856-0.110000.000070.00470excludedK562PTBP1
A3SSSEC13ENSG00000157020.13chr3-103426331034286310342633103428311034570910345856-0.151000.000060.03840shorterK562EIF3G
A3SSSEC13ENSG00000157020.13chr3-1034263310342845103426331034283110345709103458560.241000.000030.02530longerK562NPM1
A3SSSEC13ENSG00000157020.13chr3-103426331034284510342633103428311034570910345856-0.333000.000000.00000shorterK562FXR1
A3SSSEC13ENSG00000157020.13chr3-103622941036244310362294103623481036273310362777-0.447000.000000.00034shorterHepG2SRSF1
A3SSSEC13ENSG00000157020.13chr3-103426331034284510342633103428311034570910345856-0.317000.000000.00000shorterHepG2SRSF1
A3SSSEC13ENSG00000157020.13chr3-1035700410357154103570041035712010359733103597640.096000.000000.00000longerK562AQR
A3SSSEC13ENSG00000157020.13chr3-1035432910354539103543291035441410357004103571990.110000.000000.00000longerK562AQR
A3SSSEC13ENSG00000157020.13chr3-1034263310342863103426331034283110345709103458560.110000.000000.00004longerK562AQR
A3SSSEC13ENSG00000157020.13chr3-103426331034284510342633103428311034570910345856-0.171000.000010.00441shorterK562PTBP1
A3SSSEC13ENSG00000157020.13chr3-103426331034284510342633103428311034570910345856-0.184000.000050.01848shorterK562TARDBP
A3SSSEC13ENSG00000157020.13chr3-103426331034284510342633103428311034570910345856-0.163000.000050.04696shorterK562APOBEC3C
RISEC13ENSG00000157020.13chr3-103622941036277710362294103623481036273310362777-0.518000.000000.00000excludedHepG2SRSF1
RISEC13ENSG00000157020.13chr3-1036229410362777103622941036234810362733103627770.410000.000150.00291includedK562UTP18
MXESEC13ENSG00000157020.13chr3-10357064103571541035973310359796103542621035441410362733103627700.718000.015360.089231includedK562AQR
MXESEC13ENSG00000157020.13chr3-10354262103544141035700410357154103536481035378210359733103597640.086000.000000.000001includedK562AQR
MXESEC13ENSG00000157020.13chr3-1035426210354414103570041035712010353648103537821035973310359778-0.085000.002100.017332includedK562AQR
MXESEC13ENSG00000157020.13chr3-1035426210354414103570041035712010353648103537821035973310359778-0.081000.000470.028602includedK562TIA1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SEC13 is not avaliable on ENCORE database.