MAGEA12

General Information

Gene Name       : MAGEA12
Gene ID             : ENSG00000213401.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MAGEA12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MAGEA12ENSG00000213401.90.000.000.00ENCSR000AEF
HepG2MAGEA12ENSG00000213401.90.000.000.00ENCSR985KAT
K562MAGEA12ENSG00000213401.966.0061.3163.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MAGEA12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MAGEA12 RNA is bound by 6 proteins.  







eCLIP assay for MAGEA12 is not avaliable on ENCORE database.





6 proteins are bound to MAGEA12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX151899657151899712-3'-UTR,intron-Distal4.199795.75821HepG2SUB1
chrX151899589151899664-3'-UTR,intron-Distal4.387994.51210K562NOLC1
chrX151899602151899653-3'-UTR,intron-Distal5.677216.73016HepG2SUB1
chrX151899493151899540-3'-UTR,intron-Distal4.538204.12941K562DDX55
chrX151900766151900876-3'-UTR,CDS,intron-Distal3.204996.49064K562DDX3X
chrX151900682151900744-CDS,intron-Distal4.060113.48187K562RBM15
chrX151899174151899276-intron-Distal,intron-Proximal4.7996215.04663K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MAGEA12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MAGEA12 is not available on ENCORE database.

  • 28 RBPs can affect the levels of MAGEA12.  








The Knockdown/knockout RNA-Seq assay for MAGEA12 is not available on ENCORE database.





28 RBPs can affect the gene expression of MAGEA12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MAGEA12ENSG00000213401.41326.931201065.576500.316402.347701.74460K562AKAP8L
MAGEA12ENSG00000213401.44791.049602340.730401.0333015.8344014.58780K562AQR
MAGEA12ENSG00000213401.4995.112101499.35500-0.5914011.014409.81200K562DDX47
MAGEA12ENSG00000213401.41639.085201219.497200.426503.712502.64310K562EFTUD2
MAGEA12ENSG00000213401.41628.876601952.44470-0.261402.845302.11770K562EIF2S2
MAGEA12ENSG00000213401.41181.42050876.636900.430405.272104.18970K562EIF3G
MAGEA12ENSG00000213401.41292.83630943.554600.454304.242503.22730K562EIF4A3
MAGEA12ENSG00000213401.4580.43090843.48220-0.539204.043602.64720K562FKBP4
MAGEA12ENSG00000213401.41603.87350981.251100.7088010.979609.86020K562FXR1
MAGEA12ENSG00000213401.4384.49380666.33560-0.793306.042704.91090K562G3BP2
MAGEA12ENSG00000213401.41350.81420939.189300.524204.387303.19660K562HNRNPM
MAGEA12ENSG00000213401.4557.41860741.47140-0.411602.792001.30230K562KHDRBS1
MAGEA12ENSG00000213401.41365.242501105.577300.304302.450701.65620K562MAGOH
MAGEA12ENSG00000213401.41135.784101379.53510-0.280503.800802.94160K562NSUN2
MAGEA12ENSG00000213401.41532.56250983.623300.639708.264706.54000K562PCBP2
MAGEA12ENSG00000213401.41581.004901296.231200.286402.037001.33710K562PPIG
MAGEA12ENSG00000213401.41851.813701186.712300.641907.725706.46560K562PRPF8
MAGEA12ENSG00000213401.41456.781201074.164900.439504.918404.05720K562PTBP1
MAGEA12ENSG00000213401.41327.373801056.821500.328702.330101.82280K562PUS1
MAGEA12ENSG00000213401.41492.866501029.796300.535605.908404.62120K562RBM22
MAGEA12ENSG00000213401.41792.010901208.768800.567905.273804.14290K562RPS19
MAGEA12ENSG00000213401.41255.08000802.219000.645602.452401.34960K562SF1
MAGEA12ENSG00000213401.41601.529401361.176300.234502.042501.33440K562SF3A3
MAGEA12ENSG00000213401.4956.43030692.472500.465804.807603.66830K562SF3B4
MAGEA12ENSG00000213401.41328.241001053.080700.334802.905002.18370K562SRSF1
MAGEA12ENSG00000213401.41460.229301162.267300.329203.160902.28380K562SYNCRIP
MAGEA12ENSG00000213401.41381.037801065.698000.373902.910202.18480K562TARDBP
MAGEA12ENSG00000213401.4913.420401251.63230-0.454504.758803.59640K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MAGEA12 is not available on ENCORE database.





8 RBPs can affect the splicing of MAGEA12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMAGEA12ENSG00000213401.4chrX-151902177151902260151901694151901814151903103151903184-0.452000.000000.00002excludedK562SRSF1
SEMAGEA12ENSG00000213401.4chrX-151901708151901814151899301151900875151903103151903184-0.135000.000170.00786excludedK562AKAP8L
SEMAGEA12ENSG00000213401.4chrX-151902588151902690151901694151901814151903103151903184-0.072000.003760.03678excludedK562AQR
SEMAGEA12ENSG00000213401.4chrX-1519017081519018141518993011519008751519031031519031840.152000.000010.02927includedK562SDAD1
SEMAGEA12ENSG00000213401.4chrX-151901708151901814151899301151900875151903103151903184-0.107000.004440.05687excludedK562PUS1
SEMAGEA12ENSG00000213401.4chrX-151901708151901814151899301151900875151903103151903184-0.171000.000030.01007excludedK562NSUN2
SEMAGEA12ENSG00000213401.4chrX-1519021771519022601519016941519018141519031031519031840.492000.000010.01867includedK562DDX21
SEMAGEA12ENSG00000213401.4chrX-1519016941519018141518993011519008751519031031519031840.371000.006140.08468includedK562U2AF2
A3SSMAGEA12ENSG00000213401.4chrX-1519016941519019011519016941519018141519021771519022600.388000.000070.00063longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MAGEA12 is not avaliable on ENCORE database.