RALA

General Information

Gene Name       : RALA
Gene ID             : ENSG00000006451.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RALA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RALAENSG00000006451.724.1120.3322.22ENCSR000AEF
HepG2RALAENSG00000006451.717.1622.5619.86ENCSR985KAT
K562RALAENSG00000006451.717.1918.8118.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RALA is not avaliable on ENCORE database.



Proteins bound to RNA
  • RALA RNA is bound by 9 proteins.  







eCLIP assay for RALA is not avaliable on ENCORE database.





9 proteins are bound to RALA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr73974644039746515+3'-UTR4.134624.31428K562YBX3
chr73974621939746260+3'-UTR4.212074.23889K562TIA1
chr73974676839746810+3'-UTR3.634623.02250K562YBX3
chr73966324139663361+5'-UTR3.840727.89340K562DDX3X
chr73966336139663425+5'-UTR,intron-Proximal4.556157.97419K562DDX3X
chr73967174639671863+intron-Distal3.888413.19026HepG2HNRNPL
chr73967420939674265+intron-Distal3.861873.04224HepG2SUGP2
chr73967376739673843+intron-Distal4.407455.35792HepG2SUGP2
chr73967338539673428+intron-Distal3.846023.54208HepG2SUGP2
chr73967379839673853+intron-Distal3.931736.45086HepG2MATR3
chr73970432539704398+intron-Distal3.624943.29239HepG2CSTF2
chr73966758639667649+intron-Distal3.704905.93532K562PTBP1
chr73966758139667654+intron-Distal3.478284.28254HepG2MATR3
chr73967414439674200+intron-Distal3.022843.10640HepG2SUGP2
chr73966757839667700+intron-Distal4.9721011.90381HepG2PTBP1
chr73966449639664570+intron-Distal4.512065.41654K562KHSRP
chr73967389439674002+intron-Distal5.059158.56566HepG2SUGP2
chr73966801139668078+intron-Distal3.416703.54232HepG2HNRNPL
chr73967387439673949+intron-Distal3.729534.28254HepG2MATR3
chr73967411639674168+intron-Distal4.696983.96879HepG2MATR3
chr73967364239673691+intron-Distal3.058033.35050HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RALA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RALA is not available on ENCORE database.

  • 63 RBPs can affect the levels of RALA.  








The Knockdown/knockout RNA-Seq assay for RALA is not available on ENCORE database.





63 RBPs can affect the gene expression of RALA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RALAENSG00000006451.3692.70000495.634800.482903.521602.32170HepG2AATF
RALAENSG00000006451.3935.720401349.03650-0.527802.331401.83860HepG2AKAP1
RALAENSG00000006451.3406.72340765.13020-0.9117014.1186012.56940HepG2AKAP8L
RALAENSG00000006451.31020.69560723.650200.496105.233904.21420HepG2CALR
RALAENSG00000006451.3921.86170547.197000.752408.750107.61500HepG2DDX21
RALAENSG00000006451.3729.44510535.174600.446702.767401.85480HepG2DDX24
RALAENSG00000006451.3682.079201067.28800-0.645903.042202.42140HepG2EIF2S1
RALAENSG00000006451.3642.260001148.23440-0.838204.225503.38450HepG2EIF4B
RALAENSG00000006451.31450.237101207.443400.264202.734702.13680HepG2ETF1
RALAENSG00000006451.3783.614201103.89500-0.494402.029201.45620HepG2G3BP1
RALAENSG00000006451.3659.121201117.18300-0.761204.406803.54130HepG2HNRNPK
RALAENSG00000006451.3795.65780932.86300-0.229502.127901.52710HepG2HNRNPL
RALAENSG00000006451.3578.69710739.96940-0.354702.144801.50200HepG2IGF2BP1
RALAENSG00000006451.3793.844501122.17820-0.499402.174401.56770HepG2IGF2BP2
RALAENSG00000006451.3564.02640696.14140-0.303602.691501.68430HepG2KIF1C
RALAENSG00000006451.3707.688801225.12690-0.791704.173303.40130HepG2NCBP2
RALAENSG00000006451.3724.888701028.93220-0.505308.621207.69730HepG2PUM1
RALAENSG00000006451.3640.551401080.70560-0.7546011.9388010.77410HepG2QKI
RALAENSG00000006451.31216.83990633.013300.942706.731405.65670HepG2RAVER1
RALAENSG00000006451.31462.025101009.190900.534707.684006.92040HepG2RBM22
RALAENSG00000006451.3761.974301110.46880-0.543407.807606.98080HepG2NELFE
RALAENSG00000006451.3535.98590749.49790-0.483703.019101.89480HepG2RPS5
RALAENSG00000006451.3797.69140929.35320-0.220401.967701.35780HepG2SLBP
RALAENSG00000006451.3451.37100645.15600-0.515302.874201.89760HepG2SMNDC1
RALAENSG00000006451.31564.153301139.829100.456507.537506.82170HepG2SRFBP1
RALAENSG00000006451.31411.112101084.348100.379904.861004.27870HepG2SRSF1
RALAENSG00000006451.3944.72890614.143700.621204.742303.89340HepG2SUPV3L1
RALAENSG00000006451.3807.28330653.318500.305201.819901.39670HepG2TIAL1
RALAENSG00000006451.3903.06400635.527000.506802.787701.31290HepG2TRA2A
RALAENSG00000006451.3914.17300694.208200.397002.815102.18140HepG2U2AF1
RALAENSG00000006451.3504.29780637.01050-0.337002.450301.87920HepG2UTP3
RALAENSG00000006451.3796.92330554.601900.522906.948305.96330HepG2ZC3H8
RALAENSG00000006451.3959.39320725.653000.402705.389404.68960HepG2ZNF622
RALAENSG00000006451.3950.85320632.342000.588403.942802.36830HepG2ZRANB2
RALAENSG00000006451.31236.723901596.80440-0.368702.930901.66580K562ABCF1
RALAENSG00000006451.33725.278702898.684600.361907.523806.65340K562AGGF1
RALAENSG00000006451.3805.204201053.66310-0.388004.305102.38220K562AKAP1
RALAENSG00000006451.32329.226303016.24480-0.372902.609901.97420K562AKAP8L
RALAENSG00000006451.31530.110801849.62540-0.273601.914201.40900K562AQR
RALAENSG00000006451.3331.35580450.79780-0.444102.697101.65910K562CCAR1
RALAENSG00000006451.31911.383301627.226700.232102.598601.96480K562DDX47
RALAENSG00000006451.33997.837403245.494000.300702.316601.52460K562DKC1
RALAENSG00000006451.3557.53970813.33670-0.544803.115001.75030K562EEF2
RALAENSG00000006451.3888.218301172.70940-0.400904.932103.29420K562EIF2S1
RALAENSG00000006451.3794.658101033.51880-0.379203.578002.67960K562EIF3G
RALAENSG00000006451.3650.001801115.41620-0.7791010.527308.90530K562EIF4A3
RALAENSG00000006451.3636.217301004.49470-0.658909.773307.47760K562EIF4B
RALAENSG00000006451.3834.180801086.25740-0.380903.894902.54810K562GLRX3
RALAENSG00000006451.3686.68090879.89310-0.357701.990601.47310K562HNRNPC
RALAENSG00000006451.32976.766401556.274100.9355018.0273016.12080K562HSPD1
RALAENSG00000006451.31040.742501428.79730-0.457202.087801.35230K562MAGOH
RALAENSG00000006451.31037.183101426.04850-0.459402.149301.34690K562MATR3
RALAENSG00000006451.3954.271601142.06160-0.259202.555301.77650K562MTPAP
RALAENSG00000006451.31070.291001268.91320-0.245602.854602.09770K562NSUN2
RALAENSG00000006451.31061.54350764.794200.472903.977903.07920K562PRPF8
RALAENSG00000006451.32935.024502373.933300.306002.400901.64260K562PUF60
RALAENSG00000006451.32261.744002914.52530-0.365804.869004.10310K562RBM15
RALAENSG00000006451.3880.211001331.55300-0.597202.842001.98930K562RBM22
RALAENSG00000006451.3475.81480719.50310-0.596604.737803.43730K562RCC2
RALAENSG00000006451.3811.088501017.94810-0.327703.358501.61380K562RPS10
RALAENSG00000006451.3848.568501239.64740-0.546803.737402.55200K562RPS3
RALAENSG00000006451.3902.617901385.72710-0.618503.736101.90040K562SBDS
RALAENSG00000006451.3436.50410682.09410-0.644005.169303.64090K562SRFBP1
RALAENSG00000006451.3989.344801282.82950-0.374805.215803.97680K562SRPK2
RALAENSG00000006451.3866.789901360.68290-0.650603.679202.86950K562SRSF1
RALAENSG00000006451.3547.37680740.67070-0.436302.479801.52260K562SUPV3L1
RALAENSG00000006451.3776.746201377.33800-0.826404.720803.78910K562TARDBP
RALAENSG00000006451.3517.43810805.84960-0.639104.812503.48240K562TRIM56
RALAENSG00000006451.31573.425001172.098800.424703.096401.92950K562U2AF1
RALAENSG00000006451.31525.861601210.500600.333903.293402.41860K562U2AF2
RALAENSG00000006451.3984.763301345.45720-0.450206.761205.69290K562UPF1
RALAENSG00000006451.33229.169901962.651200.718303.465701.49200K562XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RALA is not available on ENCORE database.





1 RBPs can affect the splicing of RALA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERALAENSG00000006451.3chr7+3966392939664026396630813966342439726229397262880.109000.000000.00000includedK562AQR
SERALAENSG00000006451.3chr7+397262293972628839663081396634243972998039730189-0.072000.008460.07117excludedK562AQR
MXERALAENSG00000006451.3chr7+3972622939726380397299803973018939663081396634243973628339736458-0.099000.001360.011912includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RALA is not avaliable on ENCORE database.