GALNT7

General Information

Gene Name       : GALNT7
Gene ID             : ENSG00000109586.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GALNT7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GALNT7ENSG00000109586.1126.5621.1523.85ENCSR000AEF
HepG2GALNT7ENSG00000109586.110.200.150.17ENCSR985KAT
K562GALNT7ENSG00000109586.1119.7522.0820.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GALNT7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GALNT7 RNA is bound by 19 proteins.  







eCLIP assay for GALNT7 is not avaliable on ENCORE database.





19 proteins are bound to GALNT7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4174242883174242916+3'-UTR4.873547.90397K562PABPC4
chr4174219471174219572+3'-UTR,intron-Distal,intron-Proximal,polyA_site5.0596018.10022K562QKI
chr4174219346174219424+3'-UTR,CDS,intron-Distal5.172957.65820K562LIN28B
chr4174242930174243001+3'-UTR5.459019.17142K562PUM2
chr4174243479174243569+3'-UTR4.239855.13745K562YBX3
chr4174089922174089995+5'-UTR,CDS3.263576.48461K562GTF2F1
chr4174089953174090006+5'-UTR,CDS5.063405.82881K562DDX3X
chr4174089917174089982+5'-UTR3.561463.88441K562NCBP2
chr4174090005174090093+CDS3.9583213.88870K562ZNF622
chr4174223055174223212+CDS,intron-Distal,intron-Proximal3.436224.30679K562KHSRP
chr4174090021174090112+CDS3.530748.28216K562DDX3X
chr4174216591174216723+CDS,intron-Proximal4.042723.44423K562BUD13
chr4174090093174090123+CDS,intron-Proximal3.152333.02345K562ZNF622
chr4174169192174169410+CDS3.777573.02919K562GRWD1
chr4174126222174126284+intron-Distal4.138413.53404K562HNRNPM
chr4174090992174091097+intron-Distal3.195863.54602K562TIA1
chr4174103709174103782+intron-Distal4.2340714.84028K562HNRNPL
chr4174188000174188125+intron-Distal5.794647.07160K562EIF4G2
chr4174220255174220383+intron-Distal4.785926.73684K562KHSRP
chr4174104246174104282+intron-Distal4.040929.28858K562AGGF1
chr4174126329174126394+intron-Distal4.669646.09831K562HNRNPM
chr4174104046174104084+intron-Distal3.811243.37631K562HNRNPL
chr4174090617174090667+intron-Distal4.359073.90626K562XRN2
chr4174102039174102102+intron-Distal4.170713.98636K562LIN28B
chr4174103850174103926+intron-Distal3.853125.57983K562HNRNPL
chr4174103703174103783+intron-Distal3.917633.19125K562GTF2F1
chr4174091145174091218+intron-Distal4.510205.40320K562NONO
chr4174104224174104278+intron-Distal3.525104.92145K562HNRNPL
chr4174126424174126606+intron-Distal5.5450512.60662K562HNRNPM
chr4174104103174104140+intron-Distal3.893583.80954K562HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GALNT7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GALNT7 is not available on ENCORE database.

  • 82 RBPs can affect the levels of GALNT7.  








The Knockdown/knockout RNA-Seq assay for GALNT7 is not available on ENCORE database.





82 RBPs can affect the gene expression of GALNT7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GALNT7ENSG00000109586.749.6062026.123900.925101.829701.31690HepG2ACO1
GALNT7ENSG00000109586.7129.857209.539003.7669018.1204016.88670HepG2AKAP1
GALNT7ENSG00000109586.737.245007.890602.238703.911202.98440HepG2ASCC1
GALNT7ENSG00000109586.75.9176056.31180-3.250405.756104.93160HepG2BOP1
GALNT7ENSG00000109586.77.7909029.96670-1.943503.003901.94070HepG2YBX3
GALNT7ENSG00000109586.71.1344023.37400-4.364905.065103.66800HepG2CSTF2
GALNT7ENSG00000109586.79.0246030.01270-1.733602.569601.45450HepG2DDX1
GALNT7ENSG00000109586.72.5659017.06350-2.733402.668502.00120HepG2DDX21
GALNT7ENSG00000109586.732.016909.133201.809502.506001.90840HepG2DDX3X
GALNT7ENSG00000109586.720.6304058.71000-1.508802.674501.71550HepG2DDX59
GALNT7ENSG00000109586.725.410707.856001.693501.904101.38260HepG2DDX6
GALNT7ENSG00000109586.77.1287028.38410-1.993402.933301.92850HepG2DHX30
GALNT7ENSG00000109586.77.1762024.99500-1.800302.281201.65600HepG2DKC1
GALNT7ENSG00000109586.711.2141029.16250-1.378802.093601.51140HepG2DNAJC2
GALNT7ENSG00000109586.749.0899015.729801.641803.547302.28270HepG2AGO1
GALNT7ENSG00000109586.728.040408.119601.787902.030001.43590HepG2EIF4B
GALNT7ENSG00000109586.74.9737034.90500-2.811004.914303.85090HepG2EIF4G1
GALNT7ENSG00000109586.714.7355050.42690-1.774903.539102.87230HepG2ETF1
GALNT7ENSG00000109586.726.279308.419301.642001.897401.31960HepG2FXR1
GALNT7ENSG00000109586.714.6533050.29520-1.779204.441203.55640HepG2HNRNPF
GALNT7ENSG00000109586.77.0241055.94260-2.993605.250304.41310HepG2HNRNPLL
GALNT7ENSG00000109586.74.5497049.52590-3.444409.056807.81580HepG2IGF2BP1
GALNT7ENSG00000109586.734.169807.451402.197002.627101.67070HepG2IGF2BP3
GALNT7ENSG00000109586.714.4197033.53410-1.217602.001901.36650HepG2ILF2
GALNT7ENSG00000109586.728.278808.467001.739702.051401.50270HepG2MATR3
GALNT7ENSG00000109586.78.1396057.02510-2.808605.145303.79640HepG2MTPAP
GALNT7ENSG00000109586.71.7863049.59410-4.795107.301906.12210HepG2NSUN2
GALNT7ENSG00000109586.79.0668029.28120-1.691302.621601.90310HepG2PPIL4
GALNT7ENSG00000109586.7102.0910032.753701.640004.383802.15190HepG2PSIP1
GALNT7ENSG00000109586.745.777304.206403.443908.208907.36980HepG2PTBP1
GALNT7ENSG00000109586.777.1444035.521701.118803.242602.51610HepG2PUM2
GALNT7ENSG00000109586.7333.3165042.148502.9832043.5490041.96800HepG2RBM22
GALNT7ENSG00000109586.718.6438054.18830-1.539303.530302.77460HepG2RPLP0
GALNT7ENSG00000109586.780.0308015.293002.387608.530707.52180HepG2RPS19
GALNT7ENSG00000109586.711.1539055.37980-2.311803.963303.13190HepG2SF3B1
GALNT7ENSG00000109586.729.736904.383302.762103.938103.25330HepG2SF3B4
GALNT7ENSG00000109586.78.0498032.11330-1.996103.170602.42740HepG2SLBP
GALNT7ENSG00000109586.79.2329028.66340-1.634402.463201.56300HepG2SMNDC1
GALNT7ENSG00000109586.721.3884061.61690-1.526502.497301.75610HepG2SNRNP70
GALNT7ENSG00000109586.755.603504.573603.603709.082008.33600HepG2SRSF1
GALNT7ENSG00000109586.712.4105049.41520-1.993404.945904.05640HepG2SRSF7
GALNT7ENSG00000109586.70.5570041.33700-6.2136011.5757010.66860HepG2SSB
GALNT7ENSG00000109586.76.4560037.01400-2.519403.782503.00980HepG2SUPV3L1
GALNT7ENSG00000109586.724.862204.106502.597903.457602.84240HepG2TAF15
GALNT7ENSG00000109586.78.3727031.91000-1.930203.241102.70650HepG2TIAL1
GALNT7ENSG00000109586.76.6834034.63520-2.373602.947102.08540HepG2UBE2L3
GALNT7ENSG00000109586.75.8551020.01840-1.773601.933601.33230HepG2UPF1
GALNT7ENSG00000109586.75.1735033.91900-2.712903.685502.51160HepG2UPF2
GALNT7ENSG00000109586.72.7213036.43590-3.743006.296105.21750HepG2XRN2
GALNT7ENSG00000109586.74.3620022.01640-2.335503.042502.47640HepG2ZNF622
GALNT7ENSG00000109586.7849.248901159.81620-0.449606.132905.33970K562AGGF1
GALNT7ENSG00000109586.7993.411101274.36700-0.359303.083802.03160K562AKAP8
GALNT7ENSG00000109586.71048.541501276.18510-0.283503.120002.10520K562BCLAF1
GALNT7ENSG00000109586.72386.748101536.877000.634902.474001.47920K562CNOT7
GALNT7ENSG00000109586.74231.551602947.098900.521808.945607.23540K562CELF1
GALNT7ENSG00000109586.7873.005701118.86040-0.358004.209802.56000K562DDX27
GALNT7ENSG00000109586.7644.64200877.97920-0.445704.698002.84600K562DDX6
GALNT7ENSG00000109586.7876.435101298.77000-0.567409.230907.43860K562DKC1
GALNT7ENSG00000109586.7845.886201065.04440-0.332402.130801.32890K562EFTUD2
GALNT7ENSG00000109586.7602.26110904.72470-0.587105.908604.71890K562EIF4A3
GALNT7ENSG00000109586.7575.64440814.75250-0.501205.426903.73030K562EIF4B
GALNT7ENSG00000109586.72961.232602397.197400.304704.629103.42710K562EIF4G2
GALNT7ENSG00000109586.7432.28380789.73170-0.869409.027606.42630K562EWSR1
GALNT7ENSG00000109586.71062.071601389.85240-0.388103.303902.37280K562FIP1L1
GALNT7ENSG00000109586.71273.03550940.875400.436105.596404.77780K562FXR1
GALNT7ENSG00000109586.71241.29380912.243100.444302.740802.03820K562G3BP2
GALNT7ENSG00000109586.7819.001301012.61950-0.306202.077901.38580K562GPKOW
GALNT7ENSG00000109586.71006.133602076.74460-1.045508.699607.33860K562GRSF1
GALNT7ENSG00000109586.7752.18710966.37330-0.361502.708102.11650K562HNRNPC
GALNT7ENSG00000109586.7668.09250862.88240-0.369102.601401.49840K562HNRNPF
GALNT7ENSG00000109586.71270.862901884.31430-0.568206.591905.37700K562HSPD1
GALNT7ENSG00000109586.71032.120301269.40390-0.298502.268001.50300K562MAGOH
GALNT7ENSG00000109586.7962.157901225.99090-0.349603.155501.98710K562MAK16
GALNT7ENSG00000109586.71706.237901124.685600.601205.937304.71240K562PCBP3
GALNT7ENSG00000109586.71335.27910862.689800.630109.124007.70320K562POLR2G
GALNT7ENSG00000109586.71041.153901577.78870-0.599706.887605.49090K562PPIG
GALNT7ENSG00000109586.7591.00170866.42980-0.551904.563403.35850K562PSIP1
GALNT7ENSG00000109586.73310.383902781.676200.250902.771201.70270K562PUM1
GALNT7ENSG00000109586.7673.869901124.00460-0.738103.177801.49770K562RBM39
GALNT7ENSG00000109586.7776.047601017.70520-0.391104.926402.82470K562RPS10
GALNT7ENSG00000109586.7685.891401055.79720-0.622304.799103.72160K562RPS19
GALNT7ENSG00000109586.7701.12370963.11840-0.458003.021402.00400K562SF3B1
GALNT7ENSG00000109586.7544.13820949.28560-0.802907.563406.10320K562SF3B4
GALNT7ENSG00000109586.71681.774301438.832900.225002.686101.76110K562SRPK2
GALNT7ENSG00000109586.7906.924501141.76780-0.332202.437401.45980K562SRSF5
GALNT7ENSG00000109586.71161.77760865.276100.425004.417903.37450K562SYNCRIP
GALNT7ENSG00000109586.7921.364901223.64870-0.409303.248102.48150K562TARDBP
GALNT7ENSG00000109586.7754.516901180.33480-0.645608.540606.98980K562TIA1
GALNT7ENSG00000109586.7592.94800885.06220-0.577904.366102.92830K562U2AF1
GALNT7ENSG00000109586.7508.74310913.81410-0.845008.703007.26460K562U2AF2
GALNT7ENSG00000109586.71540.712701342.790900.198302.050601.31500K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GALNT7 is not available on ENCORE database.





12 RBPs can affect the splicing of GALNT7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGALNT7ENSG00000109586.7chr4+174216914174216994174216546174216677174218945174219128-0.125000.008750.07302excludedK562AQR
SEGALNT7ENSG00000109586.7chr4+1742236901742238991742231971742233151742251461742252690.064000.005150.06358includedK562PUS1
SEGALNT7ENSG00000109586.7chr4+1742236901742238861742231971742233151742251461742252690.129000.000650.01401includedK562U2AF2
SEGALNT7ENSG00000109586.7chr4+174216914174216994174216546174216677174218945174219522-0.281000.006150.08468excludedK562U2AF2
SEGALNT7ENSG00000109586.7chr4+174216914174216994174216546174216677174219265174219448-0.278000.000220.00852excludedK562AGGF1
SEGALNT7ENSG00000109586.7chr4+1742236901742238991742231971742233151742251461742252690.084000.000710.03464includedK562HNRNPK
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.310000.000010.018721includedK562IGF2BP1
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.223000.000130.032641includedK562HNRNPA1
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742165461742166771742231971742233150.369000.000000.000071includedK562AQR
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.255000.000020.000221includedK562AQR
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.257000.000290.089101includedK562DDX21
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.129000.000710.058631includedK562PUM1
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742165461742166771742231971742233150.287000.000470.022671includedK562HNRNPU
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.277000.000000.000581includedK562HNRNPU
MXEGALNT7ENSG00000109586.7chr4+1742189711742191281742192651742194481742169141742169941742231971742233150.196000.000040.003671includedK562HNRNPU
MXEGALNT7ENSG00000109586.7chr4+174218945174219128174219265174219448174216914174216994174223197174223315-0.204000.000780.090232includedK562EIF3G
MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.344000.005880.073791includedK562SF3B4
MXEGALNT7ENSG00000109586.7chr4+174218945174219128174219265174219448174216914174216994174223197174223315-0.173000.000980.054812includedK562HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GALNT7 is not avaliable on ENCORE database.