PTS

General Information

Gene Name       : PTS
Gene ID             : ENSG00000150787.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PTS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PTSENSG00000150787.77.548.437.98ENCSR000AEF
HepG2PTSENSG00000150787.715.3923.2819.34ENCSR985KAT
K562PTSENSG00000150787.721.5018.2519.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PTS is not avaliable on ENCORE database.



Proteins bound to RNA
  • PTS RNA is bound by 12 proteins.  







eCLIP assay for PTS is not avaliable on ENCORE database.





12 proteins are bound to PTS RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11112104142112104216+3'-UTR,CDS,intron-Distal,intron-Proximal4.598115.07478HepG2U2AF2
chr11112104317112104496+3'-UTR,intron-Distal3.393863.71286HepG2ZC3H11A
chr11112101342112101383+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.878165.18845HepG2U2AF2
chr11112099374112099434+5'-UTR,CDS,intron-Proximal3.552195.34140HepG2PRPF8
chr11112099386112099447+5'-UTR,CDS,intron-Proximal4.573683.85435K562PRPF8
chr11112099328112099438+5'-UTR,CDS,intron-Proximal4.024574.19412K562EFTUD2
chr11112106565112106622+5'-UTR,intron-Proximal3.566613.91876HepG2U2AF2
chr11112100918112100969+5'-UTR,CDS,intron-Distal,intron-Proximal4.300997.29386HepG2U2AF2
chr11112097239112097308+CDS,intron-Proximal5.4640930.60562HepG2PRPF8
chr11112097202112097239+CDS4.8175119.05983HepG2PRPF8
chr11112097171112097249+CDS3.995374.26442K562DDX3X
chr11112099458112099611+intron-Distal,intron-Proximal4.212097.46094K562TARDBP
chr11112098016112098078+intron-Distal3.935443.31110K562TIA1
chr11112100979112101103+intron-Distal,intron-Proximal3.290014.64228HepG2KHSRP
chr11112100968112101053+intron-Distal,intron-Proximal4.120294.10688K562KHSRP
chr11112125845112125999+intron-Distal5.962938.04355K562EIF4G2
chr11112097467112097561+intron-Distal3.353735.54603K562PRPF8
chr11112097302112097405+intron-Distal,intron-Proximal6.1693312.75970K562EFTUD2
chr11112116548112116625+intron-Distal4.750524.77636HepG2HNRNPL
chr11112097447112097525+intron-Distal5.843299.06724K562EFTUD2
chr11112097459112097531+intron-Distal3.629376.78376HepG2EFTUD2
chr11112125894112125980+intron-Distal3.851863.59342K562CSTF2T
chr11112097327112097406+intron-Distal,intron-Proximal3.368327.02084HepG2PRPF8
chr11112100804112100920+intron-Distal,intron-Proximal5.015646.73684K562KHSRP
chr11112097264112097410+intron-Distal,intron-Proximal3.166683.50696K562BUD13
chr11112097283112097411+intron-Distal,intron-Proximal6.5235822.64828HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PTS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PTS is not available on ENCORE database.

  • 56 RBPs can affect the levels of PTS.  








The Knockdown/knockout RNA-Seq assay for PTS is not available on ENCORE database.





56 RBPs can affect the gene expression of PTS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PTSENSG00000150787.3105.39080184.22740-0.805703.703002.56860HepG2ADAR
PTSENSG00000150787.3588.51420373.045600.657604.188803.55320HepG2AKAP1
PTSENSG00000150787.3579.15090409.211300.501004.992604.11490HepG2AUH
PTSENSG00000150787.3227.49370155.829700.545802.364201.64710HepG2CALR
PTSENSG00000150787.3200.54400276.91070-0.465502.813001.97190HepG2DDX19B
PTSENSG00000150787.3629.57660357.386000.816805.442404.59120HepG2DDX3X
PTSENSG00000150787.3441.99110306.916100.526102.688402.07980HepG2DDX6
PTSENSG00000150787.3202.85970286.46010-0.497902.682402.01440HepG2DKC1
PTSENSG00000150787.3451.39250295.131100.612903.770003.08480HepG2EIF2S1
PTSENSG00000150787.3418.46970292.564200.516303.395002.46850HepG2EWSR1
PTSENSG00000150787.3216.65110323.98150-0.580502.101201.33200HepG2G3BP2
PTSENSG00000150787.3500.87770343.550800.543802.634501.55110HepG2GRSF1
PTSENSG00000150787.3148.17890206.94070-0.481902.160801.61780HepG2HNRNPU
PTSENSG00000150787.3244.84080353.68650-0.530602.523901.39940HepG2KHDRBS1
PTSENSG00000150787.3184.64400330.96970-0.842004.791103.97830HepG2MATR3
PTSENSG00000150787.3460.87340338.782400.443902.212701.64410HepG2NCBP2
PTSENSG00000150787.3278.60150375.83670-0.431902.610901.87050HepG2NOL12
PTSENSG00000150787.3103.34220163.49380-0.661802.111801.45490HepG2NSUN2
PTSENSG00000150787.3432.79410301.783600.520102.925002.18380HepG2PABPC4
PTSENSG00000150787.361.01980111.94060-0.875402.961501.68520HepG2PKM
PTSENSG00000150787.3126.36210184.57380-0.546602.361101.67480HepG2PPIL4
PTSENSG00000150787.391.97840147.12980-0.677702.833402.05310HepG2PRPF4
PTSENSG00000150787.3157.68050358.76410-1.1860011.2091010.11740HepG2PUF60
PTSENSG00000150787.3295.11090380.56350-0.366901.907701.34480HepG2PUM2
PTSENSG00000150787.3217.03310304.97860-0.490803.028502.39140HepG2PUS1
PTSENSG00000150787.3427.29760297.315800.523103.725003.01700HepG2QKI
PTSENSG00000150787.3339.96730197.103900.786303.030802.29550HepG2RAVER1
PTSENSG00000150787.3516.18940392.683800.394402.641702.13270HepG2RBM22
PTSENSG00000150787.3432.39610269.858900.680005.479804.56030HepG2RBM25
PTSENSG00000150787.3212.71180284.63750-0.420201.847501.32940HepG2RECQL
PTSENSG00000150787.3256.34930372.71860-0.540002.467701.71070HepG2RPS3A
PTSENSG00000150787.3275.89220191.906500.523602.345001.61490HepG2RRP9
PTSENSG00000150787.3123.66780284.83430-1.203703.351901.82400HepG2SF1
PTSENSG00000150787.3360.24090285.822600.333701.815001.31940HepG2SF3B4
PTSENSG00000150787.3237.43060343.98680-0.534803.772502.97350HepG2SLBP
PTSENSG00000150787.3359.34490201.118900.837205.165303.82910HepG2SMNDC1
PTSENSG00000150787.3708.47210443.525800.675609.241708.47390HepG2SRFBP1
PTSENSG00000150787.3452.42600298.360300.600505.262804.66380HepG2SRSF1
PTSENSG00000150787.3205.93690354.22030-0.782406.779105.85800HepG2SRSF5
PTSENSG00000150787.3137.34280242.94700-0.822902.781901.71160HepG2TBRG4
PTSENSG00000150787.3346.67130246.409700.492403.153902.26580HepG2TIA1
PTSENSG00000150787.3116.99230202.88020-0.794204.802504.10050HepG2TRIM56
PTSENSG00000150787.3245.28040350.48780-0.514902.895201.99900HepG2TUFM
PTSENSG00000150787.3316.02420204.572700.627302.377401.79120HepG2U2AF1
PTSENSG00000150787.3248.35060147.845000.748204.463203.49910HepG2UCHL5
PTSENSG00000150787.3325.79260192.405000.759706.717705.96210HepG2ZNF622
PTSENSG00000150787.3413.81410301.728900.455602.718102.07070K562AKAP8L
PTSENSG00000150787.3391.42600251.679600.637105.145404.35620K562FXR1
PTSENSG00000150787.3279.85430155.137000.851004.861003.58840K562HNRNPM
PTSENSG00000150787.3192.36240287.15690-0.578003.445102.45020K562HNRNPU
PTSENSG00000150787.3366.45850255.727300.518902.682301.89860K562HSPD1
PTSENSG00000150787.3159.99380266.71020-0.737302.727401.31550K562ILF2
PTSENSG00000150787.390.22030142.06770-0.655102.108501.38180K562PCBP3
PTSENSG00000150787.363.06350108.97420-0.789102.540901.77640K562POLR2G
PTSENSG00000150787.3408.41450192.518001.084909.145607.78030K562PRPF8
PTSENSG00000150787.3349.23710476.62380-0.448602.459301.69210K562PUF60
PTSENSG00000150787.3605.59990299.211301.0171010.938809.90800K562PUS1
PTSENSG00000150787.362.69350151.27180-1.270805.779404.37730K562TIAL1
PTSENSG00000150787.3103.07770160.69260-0.640602.233601.39650K562TRIM56
PTSENSG00000150787.3297.43970224.454600.406102.016701.33120K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PTS is not available on ENCORE database.





17 RBPs can affect the splicing of PTS :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.370000.000000.00019excludedK562SF3B4
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.119000.003190.03692excludedHepG2U2AF2
SEPTSENSG00000150787.3chr11+1121009301121009531120993161120993961121013481121014050.093000.000650.04278includedHepG2AKAP1
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.415000.000000.00000excludedK562AQR
SEPTSENSG00000150787.3chr11+1121009301121009531120993161120993961121013481121014050.320000.000000.00000includedK562FXR1
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.282000.000090.01221excludedK562SUPV3L1
SEPTSENSG00000150787.3chr11+112100930112100953112099328112099396112101348112101405-0.164000.007310.08279excludedK562PUS1
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.260000.000090.06659excludedK562SSB
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.276000.000260.00740excludedK562U2AF1
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.155000.000610.04631excludedHepG2HNRNPL
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.265000.000120.08829excludedK562DDX21
SEPTSENSG00000150787.3chr11+112100930112100953112099328112099396112101348112101405-0.241000.000320.01435excludedK562UTP18
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.335000.000000.00012excludedK562UPF1
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.358000.000000.00011excludedK562U2AF2
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.316000.000000.00007excludedK562HNRNPU
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.690000.000000.00000excludedK562SF3B1
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.283000.000120.00708excludedHepG2HNRNPC
SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.266000.000540.09988excludedK562SERBP1
SEPTSENSG00000150787.3chr11+1121001391121002091120993161120993961121009301121009530.465000.000000.00000includedK562HNRNPC
MXEPTSENSG00000150787.3chr11+1121013481121014051121038851121039561120993161120993961121041541121045330.241000.000000.000031includedK562AQR
MXEPTSENSG00000150787.3chr11+1120993161120993961121009301121009531120970871120972491121013481121014050.120000.002440.019661includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PTS is not avaliable on ENCORE database.