SLC6A13

General Information

Gene Name       : SLC6A13
Gene ID             : ENSG00000010379.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC6A13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC6A13ENSG00000010379.150.000.240.12ENCSR000AEF
HepG2SLC6A13ENSG00000010379.150.300.070.18ENCSR985KAT
K562SLC6A13ENSG00000010379.150.040.060.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC6A13 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SLC6A13 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SLC6A13 is not avaliable on ENCORE database.






NO known proteins are bound to SLC6A13 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SLC6A13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC6A13 is not available on ENCORE database.

  • 25 RBPs can affect the levels of SLC6A13.  








The Knockdown/knockout RNA-Seq assay for SLC6A13 is not available on ENCORE database.





25 RBPs can affect the gene expression of SLC6A13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC6A13ENSG00000010379.1115.925202.999902.408202.018001.34350HepG2ASCC1
SLC6A13ENSG00000010379.1118.807501.736603.436803.420802.76260HepG2BOP1
SLC6A13ENSG00000010379.1118.953402.850102.733302.687001.92460HepG2CIRBP
SLC6A13ENSG00000010379.1112.949901.593603.022502.096901.48880HepG2CPSF6
SLC6A13ENSG00000010379.1130.890105.182502.575303.943503.14730HepG2DDX21
SLC6A13ENSG00000010379.1117.329602.983302.538202.240301.67920HepG2DDX6
SLC6A13ENSG00000010379.1157.010503.169704.1687011.3458010.08020HepG2EIF4A3
SLC6A13ENSG00000010379.1119.225903.086002.639202.351601.71470HepG2EIF4B
SLC6A13ENSG00000010379.1116.309903.077602.405802.085101.54820HepG2ETF1
SLC6A13ENSG00000010379.1133.758501.874804.170306.714305.77350HepG2HNRNPA1
SLC6A13ENSG00000010379.1128.850601.722204.066205.656704.79010HepG2HNRNPLL
SLC6A13ENSG00000010379.1112.320402.071002.572601.925001.41020HepG2HNRNPU
SLC6A13ENSG00000010379.1116.962303.015502.491802.188001.57930HepG2IGF2BP2
SLC6A13ENSG00000010379.1128.729503.198903.166804.548903.71310HepG2MAGOH
SLC6A13ENSG00000010379.1139.829804.787803.056306.059704.70920HepG2PABPC1
SLC6A13ENSG00000010379.1119.688802.932502.747102.993002.24340HepG2PABPC4
SLC6A13ENSG00000010379.1139.559206.528302.599106.091305.25200HepG2PUF60
SLC6A13ENSG00000010379.1136.928604.430903.059006.360405.49490HepG2PUS1
SLC6A13ENSG00000010379.1130.330802.906903.383105.492304.85250HepG2SRFBP1
SLC6A13ENSG00000010379.1125.168902.525603.316805.085404.43170HepG2SSB
SLC6A13ENSG00000010379.1145.783702.014904.5060010.598109.72920HepG2TIAL1
SLC6A13ENSG00000010379.1139.962403.687003.438006.243405.26280HepG2UPF1
SLC6A13ENSG00000010379.1122.053402.544103.115702.822402.09090HepG2XRN2
SLC6A13ENSG00000010379.1124.846100.463005.745603.299102.66960K562AQR
SLC6A13ENSG00000010379.1113.475901.796202.907302.098701.40700K562CPSF6
SLC6A13ENSG00000010379.1122.774404.984502.191802.537701.77200K562HSPD1
SLC6A13ENSG00000010379.1126.308902.796903.233604.287703.27910K562PUF60
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC6A13 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC6A13 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC6A13 is not avaliable on ENCORE database.