RP11-127H5.1

General Information

Gene Name       : RP11-127H5.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-127H5.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-127H5.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-127H5.1 RNA is bound by 19 proteins.  







eCLIP assay for RP11-127H5.1 is not avaliable on ENCORE database.





19 proteins are bound to RP11-127H5.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8106431360106431473+3'-UTR,5'-UTR,CDS,intron-Proximal3.741227.35873K562GRWD1
chr8106431366106431482+3'-UTR,5'-UTR,CDS,intron-Proximal3.9805720.82690K562ZNF622
chr8106374274106374374+intron-Distal5.104188.89278K562TARDBP
chr8106346245106346335+intron-Distal3.265503.42334K562KHDRBS1
chr8106331637106331700+intron-Distal3.049364.53025K562CSTF2T
chr8106331288106331398+intron-Distal,intron-Proximal3.4228011.33241K562CSTF2T
chr8106426130106426238+intron-Distal3.066695.42536K562KHSRP
chr8106331866106331961+5'-UTR,intron-Distal3.283013.93602K562EWSR1
chr8106348954106349005+intron-Distal4.6934027.27155K562AGGF1
chr8106390225106390288+intron-Distal5.260159.81960K562TARDBP
chr8106348981106349055+intron-Distal5.6297635.27188K562HNRNPL
chr8106395719106395777+intron-Distal3.228833.90146K562KHSRP
chr8106331291106331342+intron-Distal,intron-Proximal4.071914.13833K562GTF2F1
chr8106388903106389052+intron-Distal5.9995214.03766K562MATR3
chr8106414627106414681+intron-Distal3.689044.72639K562KHSRP
chr8106349055106349129+intron-Distal5.6419014.47970K562HNRNPL
chr8106330860106330896+intron-Distal4.534894.73785K562TIA1
chr8106401272106401342+intron-Distal4.490434.92524K562TARDBP
chr8106407626106407711+intron-Distal3.719107.12596K562QKI
chr8106348953106348981+intron-Distal5.9648431.99246K562HNRNPL
chr8106341562106341624+intron-Distal3.338634.84461K562U2AF2
chr8106330816106330906+intron-Distal4.1514617.54954K562PTBP1
chr8106346368106346436+intron-Distal5.551927.07160K562EIF4G2
chr8106414406106414455+intron-Distal3.700967.84449K562KHSRP
chr8106330972106331078+5'-UTR,intron-Distal3.081815.71803K562UCHL5
chr8106348920106348952+intron-Distal5.7731031.50891K562HNRNPL
chr8106340295106340427+intron-Distal3.682358.87792K562KHSRP
chr8106388246106388341+intron-Distal5.515279.60586K562MATR3
chr8106340666106340711+intron-Distal3.062553.28806K562KHSRP
chr8106414805106414915+intron-Distal5.4251618.71955K562QKI
chr8106336508106336539+intron-Distal5.5670410.47957K562KHSRP
chr8106349064106349110+intron-Distal5.6626610.16517K562AGGF1
chr8106388587106388635+intron-Distal4.600604.40618K562PTBP1
chr8106331091106331201+5'-UTR,CDS,intron-Distal4.298633.80401K562SRSF1
chr8106414519106414548+intron-Distal4.907826.07567K562KHSRP
chr8106388560106388643+intron-Distal5.5847612.73169K562MATR3
chr8106336423106336479+intron-Distal3.516115.34873K562KHSRP
chr8106348717106348822+intron-Distal5.2640310.49617K562KHSRP
chr8106395643106395719+intron-Distal3.427285.78064K562KHSRP
chr8106349005106349054+intron-Distal4.096449.70421K562AGGF1
chr8106409517106409643+intron-Distal3.870533.39089K562KHDRBS1
chr8106331700106331755+intron-Distal3.004295.23973K562CSTF2T
chr8106408516106408653+intron-Distal4.8060514.00109K562TARDBP
chr8106388262106388311+intron-Distal4.706308.05592K562PTBP1
chr8106348893106348920+intron-Distal4.3211913.92815K562HNRNPL
chr8106405535106405584+intron-Distal3.478053.30744K562PTBP1
chr8106357238106357356+intron-Distal4.462405.91698K562KHSRP
chr8106332430106332585+intron-Distal4.045027.67350K562EIF4G2
chr8106414348106414406+intron-Distal3.577098.86655K562KHSRP
chr8106389199106389276+intron-Distal4.050467.83927K562MATR3
chr8106388135106388203+intron-Distal4.239694.70117K562HNRNPL
chr8106414235106414317+intron-Distal3.491157.71234K562KHSRP
chr8106332504106332594+intron-Distal3.955235.91510K562TARDBP
chr8106374848106374932+intron-Distal4.167983.89080K562EXOSC5
chr8106336542106336570+intron-Distal3.948287.19702K562KHSRP
chr8106336479106336508+intron-Distal4.260487.69621K562KHSRP
chr8106388341106388405+intron-Distal4.583025.01208K562MATR3
chr8106414548106414608+intron-Distal4.476647.90970K562KHSRP
chr8106349188106349216+intron-Distal4.102414.50052K562HNRNPL
chr8106414154106414231+intron-Distal3.333947.21887K562KHSRP
chr8106363600106363740+intron-Distal4.7611812.65160K562TARDBP
chr8106412791106412934+intron-Distal4.162789.41035K562KHSRP
chr8106365339106365433+intron-Distal4.126873.82544K562HNRNPL
chr8106390167106390225+intron-Distal3.722175.50595K562TARDBP
chr8106388643106388757+intron-Distal4.672509.70238K562MATR3
chr8106349222106349272+intron-Distal3.778155.12089K562HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-127H5.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-127H5.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-127H5.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-127H5.1 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-127H5.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-127H5.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-127H5.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-127H5.1 is not avaliable on ENCORE database.