RAD51

General Information

Gene Name : RAD51
Gene ID : ENSG00000051180.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RAD51)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RAD51	ENSG00000051180.16	24.45	22.87	23.66	ENCSR000AEF
HepG2	RAD51	ENSG00000051180.16	24.67	30.78	27.73	ENCSR985KAT
K562	RAD51	ENSG00000051180.16	35.01	35.15	35.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RAD51 is not avaliable on ENCORE database.

Proteins bound to RNA

RAD51 RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for RAD51 is not avaliable on ENCORE database.

9 proteins are bound to RAD51 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	40990929	40991021	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.11491	7.15688	K562	BUD13
chr15	40990900	40991072	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.74056	6.10522	K562	GPKOW
chr15	41023595	41023695	+	3'-UTR	3.82963	6.06851	HepG2	SUB1
chr15	41020958	41021017	+	3'-UTR,CDS	4.42324	5.43239	K562	YBX3
chr15	40987556	40987626	+	5'-UTR,intron-Distal,intron-Proximal	3.07295	4.59340	K562	DDX3X
chr15	40987494	40987608	+	5'-UTR,intron-Distal,intron-Proximal	4.26644	4.48787	K562	FTO
chr15	41023578	41023679	+	3'-UTR	3.61793	4.44982	K562	UPF1
chr15	40987624	40987666	+	5'-UTR,intron-Distal,intron-Proximal	4.78459	4.13847	K562	AQR
chr15	41023590	41023661	+	3'-UTR	3.24501	3.34554	K562	NOLC1
chr15	40993369	40993399	+	CDS	3.06933	3.26789	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 13 entries

eCLIP assay for RAD51 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RAD51 is not available on ENCORE database.
103 RBPs can affect the levels of RAD51.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RAD51 is not available on ENCORE database.

103 RBPs can affect the gene expression of RAD51 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RAD51	ENSG00000051180.12	79.90690	443.07020	-2.47110	47.17980	45.77500	HepG2	SRFBP1
RAD51	ENSG00000051180.12	47.02890	321.39260	-2.77270	45.81140	44.28540	HepG2	ZNF622
RAD51	ENSG00000051180.12	69.27570	392.27470	-2.50140	38.99620	37.49030	HepG2	RBM22
RAD51	ENSG00000051180.12	46.35770	337.79580	-2.86530	38.36220	36.50430	HepG2	RPLP0
RAD51	ENSG00000051180.12	26.32340	240.62120	-3.19230	31.93070	30.28100	HepG2	BOP1
RAD51	ENSG00000051180.12	24.36300	233.37120	-3.25990	29.78960	27.75670	HepG2	RRP9
RAD51	ENSG00000051180.12	57.72220	304.53180	-2.39940	24.79760	23.14070	HepG2	SUPV3L1
RAD51	ENSG00000051180.12	54.71200	250.96750	-2.19760	23.60100	22.40870	HepG2	TIAL1
RAD51	ENSG00000051180.12	84.95870	268.85050	-1.66200	19.18850	17.78710	HepG2	CKAP4
RAD51	ENSG00000051180.12	191.66610	469.32510	-1.29200	19.04210	17.70320	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 120 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RAD51 is not available on ENCORE database.

11 RBPs can affect the splicing of RAD51 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RAD51	ENSG00000051180.12	chr15	+	41022050	41022172			41021702	41021832	41023252	41023791	-0.14500	0.00000	0.00000	excluded	K562	PUS1
SE	RAD51	ENSG00000051180.12	chr15	+	40994003	40994124			40993261	40993399	40998374	40998492	0.57300	0.00000	0.00000	included	K562	HNRNPC
MXE	RAD51	ENSG00000051180.12	chr15	+	41020908	41021022	41021702	41021832	41011002	41011097	41023252	41023790	-0.07500	0.00000	0.00009	2included	K562	PUS1
MXE	RAD51	ENSG00000051180.12	chr15	+	40994003	40994124	40998374	40998492	40993261	40993399	41001222	41001314	0.28800	0.00000	0.00000	1included	K562	HNRNPC
MXE	RAD51	ENSG00000051180.12	chr15	+	40998374	40998492	41011083	41011097	40993261	40993399	41020908	41021022	-0.43500	0.00000	0.00009	2included	K562	HNRNPC
SE	RAD51	ENSG00000051180.12	chr15	+	40998374	40998492			40994003	40994124	41001222	41001314	-0.20200	0.00001	0.00042	excluded	K562	HNRNPC
A5SS	RAD51	ENSG00000051180.12	chr15	+	40987371	40987623			40987371	40987519	40990954	40991043	-0.08200	0.00016	0.07970	shorter	K562	ZC3H8
SE	RAD51	ENSG00000051180.12	chr15	+	41022050	41022172			41021702	41021832	41023252	41024354	-0.14800	0.00024	0.00697	excluded	K562	U2AF1
SE	RAD51	ENSG00000051180.12	chr15	+	41022050	41022172			41021702	41021832	41023252	41023791	-0.14400	0.00028	0.00684	excluded	K562	U2AF2
MXE	RAD51	ENSG00000051180.12	chr15	+	41001222	41001314	41011083	41011097	40993261	40993399	41020908	41021022	-0.39200	0.00032	0.05336	2included	K562	LSM11

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RAD51

General Information

Functions

Localization

Domains (AlphaFold: RAD51)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RAD51 is not avaliable on ENCORE database.

9 proteins are bound to RAD51 RNA:

eCLIP assay for RAD51 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RAD51 is not available on ENCORE database.

103 RBPs can affect the gene expression of RAD51 :

The Knockdown/knockout RNA-Seq assay for RAD51 is not available on ENCORE database.

11 RBPs can affect the splicing of RAD51 :

The Knockdown/knockout RNA-Seq assay for RAD51 is not avaliable on ENCORE database.