RAD51

General Information

Gene Name       : RAD51
Gene ID             : ENSG00000051180.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RAD51)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RAD51ENSG00000051180.1624.4522.8723.66ENCSR000AEF
HepG2RAD51ENSG00000051180.1624.6730.7827.73ENCSR985KAT
K562RAD51ENSG00000051180.1635.0135.1535.08ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RAD51 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RAD51 RNA is bound by 9 proteins.  







eCLIP assay for RAD51 is not avaliable on ENCORE database.





9 proteins are bound to RAD51 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154102359041023661+3'-UTR3.245013.34554K562NOLC1
chr154099092940991021+3'-UTR,5'-UTR,CDS,intron-Proximal4.114917.15688K562BUD13
chr154099090040991072+3'-UTR,5'-UTR,CDS,intron-Proximal3.740566.10522K562GPKOW
chr154102359541023695+3'-UTR3.829636.06851HepG2SUB1
chr154102095841021017+3'-UTR,CDS4.423245.43239K562YBX3
chr154102383641023909+3'-UTR4.410413.20319K562UPF1
chr154102357841023679+3'-UTR3.617934.44982K562UPF1
chr154098762440987666+5'-UTR,intron-Distal,intron-Proximal4.784594.13847K562AQR
chr154098755640987626+5'-UTR,intron-Distal,intron-Proximal3.072954.59340K562DDX3X
chr154098749440987608+5'-UTR,intron-Distal,intron-Proximal4.266444.48787K562FTO
chr154098737440987421+5'-UTR,intron-Distal3.653693.08493K562DDX3X
chr154100121741001261+5'-UTR,CDS,intron-Distal,intron-Proximal3.086453.13705K562BUD13
chr154099336940993399+CDS3.069333.26789K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RAD51 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RAD51 is not available on ENCORE database.

  • 103 RBPs can affect the levels of RAD51.  








The Knockdown/knockout RNA-Seq assay for RAD51 is not available on ENCORE database.





103 RBPs can affect the gene expression of RAD51 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RAD51ENSG00000051180.1286.50950210.39270-1.282206.722105.93420HepG2AKAP1
RAD51ENSG00000051180.1240.4233081.63250-1.014002.732801.70000HepG2AKAP8
RAD51ENSG00000051180.1281.65580174.07610-1.092105.229004.16660HepG2ASCC1
RAD51ENSG00000051180.12211.64180408.79650-0.949809.830208.66830HepG2AUH
RAD51ENSG00000051180.12132.49750270.33320-1.028806.775505.43850HepG2BCLAF1
RAD51ENSG00000051180.1226.32340240.62120-3.1923031.9307030.28100HepG2BOP1
RAD51ENSG00000051180.1295.76810259.18400-1.4364011.6607010.25380HepG2CALR
RAD51ENSG00000051180.1284.95870268.85050-1.6620019.1885017.78710HepG2CKAP4
RAD51ENSG00000051180.12104.44510220.89450-1.080606.263205.25950HepG2CPSF6
RAD51ENSG00000051180.12302.78920476.39970-0.653906.804805.71840HepG2DAZAP1
RAD51ENSG00000051180.12152.67250248.72060-0.704105.115204.02830HepG2DDX19B
RAD51ENSG00000051180.1284.68470246.38460-1.540707.674406.60160HepG2DDX21
RAD51ENSG00000051180.1264.00150201.52690-1.6548010.787909.62970HepG2DDX3X
RAD51ENSG00000051180.12141.57410305.93640-1.111707.514906.31300HepG2DDX55
RAD51ENSG00000051180.12125.63670250.84490-0.997504.402503.18000HepG2DDX59
RAD51ENSG00000051180.1269.78160173.14740-1.311106.328205.42350HepG2DDX6
RAD51ENSG00000051180.12127.10370223.34770-0.813304.453203.22100HepG2DHX30
RAD51ENSG00000051180.12157.87730257.30050-0.704704.339503.52770HepG2DKC1
RAD51ENSG00000051180.12166.72950231.55960-0.473902.179301.54750HepG2DNAJC21
RAD51ENSG00000051180.12152.71810229.55150-0.587903.467702.75220HepG2DNAJC2
RAD51ENSG00000051180.12114.16090175.17470-0.617702.351201.33170HepG2EFTUD2
RAD51ENSG00000051180.12126.24620226.66520-0.844303.883402.55800HepG2AGO1
RAD51ENSG00000051180.1234.26590166.41940-2.2800014.3659013.08620HepG2EIF2S1
RAD51ENSG00000051180.1284.64850170.58620-1.010904.751803.59110HepG2EIF3D
RAD51ENSG00000051180.12260.07660470.03590-0.853809.280307.91830HepG2EIF4G1
RAD51ENSG00000051180.12295.35620450.25740-0.608303.982803.01760HepG2EIF4G2
RAD51ENSG00000051180.12191.66610469.32510-1.2920019.0421017.70320HepG2ETF1
RAD51ENSG00000051180.12174.30580262.77570-0.592203.163302.27340HepG2EWSR1
RAD51ENSG00000051180.12165.08330284.38700-0.784703.328602.49230HepG2FIP1L1
RAD51ENSG00000051180.12106.58840221.29150-1.053903.228802.12790HepG2FTO
RAD51ENSG00000051180.12369.40910185.591100.993007.399506.30740HepG2FXR1
RAD51ENSG00000051180.1276.70600172.13880-1.166205.861404.90890HepG2G3BP1
RAD51ENSG00000051180.1291.76100151.88130-0.727002.465701.62510HepG2GEMIN5
RAD51ENSG00000051180.12194.08760284.05590-0.549502.585501.60360HepG2GNB2L1
RAD51ENSG00000051180.12114.26050250.37710-1.131806.717205.74720HepG2GPKOW
RAD51ENSG00000051180.12113.03300233.77840-1.048406.004505.10280HepG2HNRNPA1
RAD51ENSG00000051180.12262.35080437.84650-0.738906.846605.49150HepG2HNRNPA2B1
RAD51ENSG00000051180.12123.95780260.04740-1.068906.737905.69430HepG2HNRNPC
RAD51ENSG00000051180.12193.39920313.57650-0.697203.389702.60180HepG2HNRNPF
RAD51ENSG00000051180.1279.66130238.94160-1.5847011.3362010.16790HepG2HNRNPLL
RAD51ENSG00000051180.12133.17220258.32730-0.955907.623606.65460HepG2HNRNPU
RAD51ENSG00000051180.12186.06600308.78360-0.730804.905703.96760HepG2IGF2BP1
RAD51ENSG00000051180.1240.61460174.96670-2.1070013.6540012.28200HepG2IGF2BP2
RAD51ENSG00000051180.12124.2082062.686600.986403.619102.22390HepG2KHDRBS1
RAD51ENSG00000051180.12160.01970380.54730-1.249809.920808.34850HepG2LARP4
RAD51ENSG00000051180.12315.35640185.656100.764304.327303.50990HepG2MAGOH
RAD51ENSG00000051180.12278.78240186.687800.578402.400301.81040HepG2MATR3
RAD51ENSG00000051180.12168.40890281.00440-0.738603.022601.87780HepG2NONO
RAD51ENSG00000051180.1268.68430170.14060-1.308706.942105.80550HepG2PABPC4
RAD51ENSG00000051180.1285.86200284.72160-1.7295013.8101011.76520HepG2PCBP2
RAD51ENSG00000051180.1250.14200235.92530-2.2342019.0764017.23430HepG2PRPF8
RAD51ENSG00000051180.12164.99530450.95890-1.4506017.8368016.50370HepG2PUF60
RAD51ENSG00000051180.12289.93400478.72720-0.723508.046407.14490HepG2PUM1
RAD51ENSG00000051180.12313.13820478.36850-0.611304.737903.87150HepG2PUM2
RAD51ENSG00000051180.12117.12780213.72280-0.867704.680403.89960HepG2QKI
RAD51ENSG00000051180.12170.09950349.41590-1.038609.624508.15890HepG2RBM15
RAD51ENSG00000051180.1269.27570392.27470-2.5014038.9962037.49030HepG2RBM22
RAD51ENSG00000051180.12122.61980193.97370-0.661702.840802.15860HepG2RBM25
RAD51ENSG00000051180.12152.6988063.509901.265505.676503.50940HepG2RBM47
RAD51ENSG00000051180.1246.35770337.79580-2.8653038.3622036.50430HepG2RPLP0
RAD51ENSG00000051180.1276.61950269.93350-1.8168013.7542011.82990HepG2RPS10
RAD51ENSG00000051180.1246.60310166.00070-1.8327012.2884011.10500HepG2RPS19
RAD51ENSG00000051180.12130.33660309.50440-1.2477010.058208.61510HepG2RPS2
RAD51ENSG00000051180.1224.36300233.37120-3.2599029.7896027.75670HepG2RRP9
RAD51ENSG00000051180.12191.62840329.51100-0.782003.796003.00100HepG2SF3A3
RAD51ENSG00000051180.12109.91970236.49110-1.105306.833205.76620HepG2SF3B1
RAD51ENSG00000051180.12144.18460205.45720-0.510902.135301.60560HepG2SF3B4
RAD51ENSG00000051180.12277.91930432.42890-0.637805.783004.83100HepG2SLBP
RAD51ENSG00000051180.12138.52400268.11170-0.952703.437501.65740HepG2SLTM
RAD51ENSG00000051180.12147.95860280.32180-0.921905.314203.95940HepG2SMNDC1
RAD51ENSG00000051180.12119.65930263.14280-1.136905.772904.63550HepG2SNRNP70
RAD51ENSG00000051180.1279.90690443.07020-2.4711047.1798045.77500HepG2SRFBP1
RAD51ENSG00000051180.12350.03790214.458800.706705.337204.73460HepG2SRSF1
RAD51ENSG00000051180.12271.64610445.27350-0.713006.733205.81400HepG2SRSF5
RAD51ENSG00000051180.12127.03620308.07790-1.2781013.3633012.03250HepG2SRSF7
RAD51ENSG00000051180.1290.13890174.47870-0.952805.367904.64360HepG2SRSF9
RAD51ENSG00000051180.12195.69670384.70790-0.9751010.412009.54070HepG2SSB
RAD51ENSG00000051180.12146.15880256.74700-0.812803.151901.86140HepG2SUB1
RAD51ENSG00000051180.12273.26890506.38380-0.8899011.3269010.21300HepG2SUCLG1
RAD51ENSG00000051180.1257.72220304.53180-2.3994024.7976023.14070HepG2SUPV3L1
RAD51ENSG00000051180.1269.68410232.95800-1.7412013.3705011.96620HepG2TARDBP
RAD51ENSG00000051180.1294.38280204.10290-1.112706.008004.63150HepG2TFIP11
RAD51ENSG00000051180.1254.71200250.96750-2.1976023.6010022.40870HepG2TIAL1
RAD51ENSG00000051180.12146.85330243.30390-0.728403.239002.56400HepG2U2AF1
RAD51ENSG00000051180.1252.96420256.19060-2.274108.634506.80230HepG2U2AF2
RAD51ENSG00000051180.12295.87370466.37440-0.656503.505802.55970HepG2UBE2L3
RAD51ENSG00000051180.12114.68600292.22570-1.3494014.2170012.86700HepG2UPF1
RAD51ENSG00000051180.12180.28850300.36830-0.736405.266703.86320HepG2UTP18
RAD51ENSG00000051180.12215.57850282.13270-0.388201.994001.46790HepG2UTP3
RAD51ENSG00000051180.12160.84920302.16170-0.909605.128503.71230HepG2XRCC6
RAD51ENSG00000051180.1247.02890321.39260-2.7727045.8114044.28540HepG2ZNF622
RAD51ENSG00000051180.12150.95280274.54180-0.862904.712402.98080HepG2ZRANB2
RAD51ENSG00000051180.121201.981501762.96880-0.552606.332805.50590K562AQR
RAD51ENSG00000051180.12418.62720559.15540-0.417602.769701.71650K562CCAR1
RAD51ENSG00000051180.12698.12210964.46020-0.466203.353702.19250K562DDX3X
RAD51ENSG00000051180.12512.26670900.87500-0.814409.176207.42050K562EFTUD2
RAD51ENSG00000051180.12626.25070964.59760-0.623204.807903.39670K562EIF3D
RAD51ENSG00000051180.12696.65240847.53250-0.282802.149101.44110K562EIF3G
RAD51ENSG00000051180.12607.14930821.31440-0.435902.857101.70990K562FKBP4
RAD51ENSG00000051180.12852.463601047.91170-0.297802.565801.97840K562FXR1
RAD51ENSG00000051180.12906.034701161.61320-0.358502.435401.37060K562GLRX3
RAD51ENSG00000051180.121384.885901695.24260-0.291702.375701.67360K562GRSF1
RAD51ENSG00000051180.12686.44810946.04420-0.462804.093503.38270K562HNRNPC
RAD51ENSG00000051180.12983.66000766.338700.360102.188101.36400K562HNRNPM
RAD51ENSG00000051180.121255.405901532.46820-0.287702.837201.93260K562HNRNPU
RAD51ENSG00000051180.12338.34170582.26940-0.783205.280103.93630K562KRR1
RAD51ENSG00000051180.12723.967801094.91960-0.596806.455304.94620K562PCBP2
RAD51ENSG00000051180.12537.81080876.65420-0.704906.771305.59590K562PRPF8
RAD51ENSG00000051180.121527.063002447.00580-0.6803010.125508.54090K562PUF60
RAD51ENSG00000051180.122150.393202550.19960-0.246002.744001.78880K562PUM2
RAD51ENSG00000051180.121344.165201586.48920-0.239102.008101.48810K562RBM15
RAD51ENSG00000051180.12918.944601146.49130-0.319202.282401.52400K562RBM22
RAD51ENSG00000051180.12946.582601206.47210-0.350002.469701.44670K562NELFE
RAD51ENSG00000051180.12668.02990892.99520-0.418702.394601.63680K562RPS19
RAD51ENSG00000051180.12710.468801017.67450-0.518406.097304.79240K562SF3B4
RAD51ENSG00000051180.12917.675101434.16490-0.644202.492101.35110K562SNRNP200
RAD51ENSG00000051180.121422.882701172.001800.279702.215801.57450K562SRSF1
RAD51ENSG00000051180.12794.497201186.19270-0.578205.790204.74350K562TARDBP
RAD51ENSG00000051180.12805.02900979.84050-0.283502.172401.46110K562U2AF2
RAD51ENSG00000051180.12984.270801280.25030-0.379303.771402.79340K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RAD51 is not available on ENCORE database.





11 RBPs can affect the splicing of RAD51 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241024354-0.116000.001020.02130excludedK562SRSF1
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241023791-0.145000.000000.00000excludedK562PUS1
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241024354-0.148000.000240.00697excludedK562U2AF1
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241023788-0.062000.001330.07877excludedK562HNRNPUL1
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241024354-0.075000.001320.04198excludedK562UTP18
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241023791-0.144000.000280.00684excludedK562U2AF2
SERAD51ENSG00000051180.12chr15+410110024101109741001222410013144102090841021022-0.075000.001410.02666excludedK562U2AF2
SERAD51ENSG00000051180.12chr15+410220504102217241021702410218324102325241024354-0.067000.000970.02706excludedK562AGGF1
SERAD51ENSG00000051180.12chr15+4099400340994124409932614099339940998374409984920.221000.003190.09235includedHepG2HNRNPC
SERAD51ENSG00000051180.12chr15+4099400340994124409932614099339940998374409984920.573000.000000.00000includedK562HNRNPC
SERAD51ENSG00000051180.12chr15+409983744099849240994003409941244100122241001314-0.202000.000010.00042excludedK562HNRNPC
A5SSRAD51ENSG00000051180.12chr15+409873714098762340987371409875194099095440991043-0.082000.000160.07970shorterK562ZC3H8
MXERAD51ENSG00000051180.12chr15+4102090841021022410217024102183241011002410110974102325241023790-0.075000.000000.000092includedK562PUS1
MXERAD51ENSG00000051180.12chr15+4100122241001314410110024101109740993261409933994102090841021022-0.061000.001990.085992includedK562LARP7
MXERAD51ENSG00000051180.12chr15+40994003409941244099837440998492409932614099339941001222410013140.288000.000000.000001includedK562HNRNPC
MXERAD51ENSG00000051180.12chr15+4099837440998492410110834101109740993261409933994102090841021022-0.435000.000000.000092includedK562HNRNPC
MXERAD51ENSG00000051180.12chr15+4100122241001314410110834101109740993261409933994102090841021022-0.392000.000320.053362includedK562LSM11

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RAD51 is not avaliable on ENCORE database.