BTF3L4

General Information

Gene Name       : BTF3L4
Gene ID             : ENSG00000134717.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: BTF3L4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BTF3L4ENSG00000134717.1757.7651.9054.83ENCSR000AEF
HepG2BTF3L4ENSG00000134717.1729.0366.8347.93ENCSR985KAT
K562BTF3L4ENSG00000134717.1761.4966.6264.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BTF3L4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BTF3L4 RNA is bound by 12 proteins.  







eCLIP assay for BTF3L4 is not avaliable on ENCORE database.





12 proteins are bound to BTF3L4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr15255283752552891+3'-UTR3.900694.81657K562IGF2BP1
chr15255182852551886+3'-UTR,CDS,intron-Proximal3.430984.64824K562PRPF8
chr15255282652552892+3'-UTR,polyA_site3.531647.91135K562FAM120A
chr15255508252555174+3'-UTR4.161354.40891K562FAM120A
chr15255259652552639+3'-UTR3.395134.48983K562TIA1
chr15255178652551888+3'-UTR,CDS,intron-Proximal5.291959.10443HepG2PRPF8
chr15255176752551892+3'-UTR,CDS,intron-Proximal3.687787.92595K562SF3B4
chr15255503252555082+3'-UTR3.783765.10007K562FAM120A
chr15255177052551836+3'-UTR,CDS,intron-Proximal5.162924.39274K562GPKOW
chr15255255252552591+3'-UTR4.1715611.67768K562PUM2
chr15253060352530690+5'-UTR,CDS,intron-Proximal4.378393.89565K562PRPF8
chr15252202652522052+5'-UTR,intron-Proximal3.270926.12311K562DDX3X
chr15252201252522095+5'-UTR,intron-Proximal4.0970316.25866HepG2PRPF8
chr15252204852522096+5'-UTR,intron-Proximal4.001073.52230K562AQR
chr15253330752533390+intron-Distal3.896133.78322K562KHDRBS1
chr15254391152543967+intron-Distal3.633527.39032HepG2ILF3
chr15253912552539203+intron-Distal3.988256.39350HepG2HNRNPL
chr15255173352551767+intron-Proximal3.758454.42765K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BTF3L4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BTF3L4 is not available on ENCORE database.

  • 71 RBPs can affect the levels of BTF3L4.  








The Knockdown/knockout RNA-Seq assay for BTF3L4 is not available on ENCORE database.





71 RBPs can affect the gene expression of BTF3L4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BTF3L4ENSG00000134717.131546.738301112.864700.474903.404002.22270HepG2AATF
BTF3L4ENSG00000134717.131066.643101341.82460-0.331104.354403.62470HepG2ACO1
BTF3L4ENSG00000134717.13368.883101067.84240-1.5335013.8675012.46760HepG2CPSF6
BTF3L4ENSG00000134717.132018.485201750.096700.205701.888201.33830HepG2CELF1
BTF3L4ENSG00000134717.131569.015101881.93110-0.262403.848802.99810HepG2DAZAP1
BTF3L4ENSG00000134717.13782.203101241.00600-0.6659014.9420013.34620HepG2DDX19B
BTF3L4ENSG00000134717.131704.424501361.045800.324503.597302.27790HepG2DDX1
BTF3L4ENSG00000134717.131584.321801287.201600.299502.324401.42740HepG2DHX30
BTF3L4ENSG00000134717.13892.986001283.83030-0.523704.481203.33580HepG2EEF2
BTF3L4ENSG00000134717.131288.367002204.04550-0.774605.022704.23630HepG2EIF2S1
BTF3L4ENSG00000134717.131677.004302435.99770-0.538603.074602.40150HepG2EIF4A3
BTF3L4ENSG00000134717.131285.68980988.962400.378502.547301.32600HepG2FKBP4
BTF3L4ENSG00000134717.131859.251002457.00770-0.402202.286001.65460HepG2FXR1
BTF3L4ENSG00000134717.131751.198802279.66200-0.380502.031501.45830HepG2G3BP1
BTF3L4ENSG00000134717.13812.053401210.58780-0.576102.817702.17180HepG2GPKOW
BTF3L4ENSG00000134717.131581.585801281.072200.303903.870102.72850HepG2HDGF
BTF3L4ENSG00000134717.132077.147301729.477400.264202.988102.02190HepG2HNRNPA2B1
BTF3L4ENSG00000134717.131457.685002307.36720-0.662605.046104.12360HepG2HNRNPK
BTF3L4ENSG00000134717.131646.135601155.276800.510705.002204.18200HepG2HNRNPLL
BTF3L4ENSG00000134717.131262.968301488.78280-0.237302.503401.92630HepG2HNRNPU
BTF3L4ENSG00000134717.13834.522301191.15790-0.513306.060805.03050HepG2IGF2BP1
BTF3L4ENSG00000134717.131760.797001520.747300.211302.622201.90640HepG2ILF2
BTF3L4ENSG00000134717.131500.749401928.15460-0.361502.133101.41120HepG2LARP4
BTF3L4ENSG00000134717.13897.807001494.96110-0.7356010.077108.03200HepG2LARP7
BTF3L4ENSG00000134717.131515.594202457.86180-0.697504.788303.93260HepG2MAGOH
BTF3L4ENSG00000134717.131243.708902530.08120-1.024508.463407.38540HepG2NCBP2
BTF3L4ENSG00000134717.132200.082101866.111100.237402.104501.43700HepG2NOL12
BTF3L4ENSG00000134717.131112.93150861.903200.368703.572202.17260HepG2PKM
BTF3L4ENSG00000134717.131713.908501190.074100.526109.703108.38530HepG2PRPF4
BTF3L4ENSG00000134717.131879.844402316.10120-0.301104.278103.62960HepG2PTBP1
BTF3L4ENSG00000134717.131615.959601366.738700.241602.822402.20240HepG2PUS1
BTF3L4ENSG00000134717.132098.671002508.52890-0.257402.762602.13810HepG2QKI
BTF3L4ENSG00000134717.131885.811601488.975800.340802.865001.99430HepG2RBM15
BTF3L4ENSG00000134717.132902.230602119.865000.453107.871607.10160HepG2RBM22
BTF3L4ENSG00000134717.13737.685401802.65150-1.2890025.3654022.49970HepG2RBM27
BTF3L4ENSG00000134717.132067.731302577.65050-0.318004.948504.26140HepG2NELFE
BTF3L4ENSG00000134717.131949.567302400.63630-0.300304.477103.71770HepG2RECQL
BTF3L4ENSG00000134717.131048.652001303.03530-0.313302.272201.64390HepG2RPLP0
BTF3L4ENSG00000134717.13800.941701014.09480-0.340402.528101.93820HepG2RPS19
BTF3L4ENSG00000134717.131348.251701943.61790-0.527703.730002.80180HepG2RPS3A
BTF3L4ENSG00000134717.131159.09430906.866900.353902.309601.58420HepG2RRP9
BTF3L4ENSG00000134717.132230.135501575.033100.501602.923201.35680HepG2RTF1
BTF3L4ENSG00000134717.131934.076102411.47310-0.318304.906604.15480HepG2SF3B4
BTF3L4ENSG00000134717.131010.541601475.24800-0.545803.620602.51190HepG2SMNDC1
BTF3L4ENSG00000134717.132161.798001272.385400.764606.280805.09490HepG2SNRNP70
BTF3L4ENSG00000134717.133287.583602394.296900.4573011.6089010.77280HepG2SRFBP1
BTF3L4ENSG00000134717.132123.155301758.741800.271603.324302.64930HepG2SRSF5
BTF3L4ENSG00000134717.132054.457601353.436600.602004.163602.67410HepG2SUB1
BTF3L4ENSG00000134717.13618.287301107.94530-0.8415011.547809.75140HepG2SUPT6H
BTF3L4ENSG00000134717.131509.938101125.758100.423502.540401.84140HepG2TARDBP
BTF3L4ENSG00000134717.131085.91470792.825200.453703.119502.06350HepG2TFIP11
BTF3L4ENSG00000134717.131091.908801446.73840-0.406004.612604.00170HepG2TIAL1
BTF3L4ENSG00000134717.131184.459001459.55560-0.301303.711003.07860HepG2TRIM56
BTF3L4ENSG00000134717.132040.678901423.741700.519303.258701.87850HepG2XRCC5
BTF3L4ENSG00000134717.131845.972501395.050000.404008.250407.43660HepG2ZNF622
BTF3L4ENSG00000134717.132189.574301446.517300.598004.656302.93470HepG2ZRANB2
BTF3L4ENSG00000134717.131956.021302458.50090-0.329903.051802.36480K562AKAP8L
BTF3L4ENSG00000134717.13679.589501567.68310-1.2059021.4616019.24840K562CPSF6
BTF3L4ENSG00000134717.133888.502403165.377000.296703.286002.22210K562CELF1
BTF3L4ENSG00000134717.132395.249301929.878700.311604.512803.70760K562DDX47
BTF3L4ENSG00000134717.13833.671001093.81550-0.391802.817401.89560K562EFTUD2
BTF3L4ENSG00000134717.131900.603001609.401800.239802.514101.82280K562EIF2S2
BTF3L4ENSG00000134717.13888.773001241.66950-0.482404.800603.71930K562EIF4A3
BTF3L4ENSG00000134717.132585.766601641.927400.655105.911904.79180K562G3BP2
BTF3L4ENSG00000134717.13907.461001496.78660-0.722007.370506.07280K562GPKOW
BTF3L4ENSG00000134717.133460.466002172.505500.6715010.234208.72950K562HSPD1
BTF3L4ENSG00000134717.13848.120801270.45560-0.583006.536004.28340K562LARP7
BTF3L4ENSG00000134717.131357.019401904.62290-0.489106.042004.78340K562MAGOH
BTF3L4ENSG00000134717.131584.798401900.76540-0.262302.194401.38220K562MATR3
BTF3L4ENSG00000134717.131161.513601461.01590-0.331002.695501.83380K562METAP2
BTF3L4ENSG00000134717.133585.784402815.811800.348603.180201.56990K562NOL12
BTF3L4ENSG00000134717.131295.761301694.65040-0.387203.718202.58550K562PCBP2
BTF3L4ENSG00000134717.133345.985702645.069200.339004.136502.41360K562PNPT1
BTF3L4ENSG00000134717.131524.667301850.45730-0.279402.483801.84920K562PTBP1
BTF3L4ENSG00000134717.133857.977102987.596700.368804.802303.36540K562PUM1
BTF3L4ENSG00000134717.131916.184802375.64920-0.310103.738603.06450K562RBM15
BTF3L4ENSG00000134717.131179.447501774.39050-0.589207.323705.87350K562RBM22
BTF3L4ENSG00000134717.131745.389201088.408500.681205.904203.98160K562RRP9
BTF3L4ENSG00000134717.131243.227601708.48380-0.458602.981602.09270K562SF3B4
BTF3L4ENSG00000134717.131230.868801467.12930-0.253302.909501.95310K562SRPK2
BTF3L4ENSG00000134717.131216.64480978.393100.314302.712901.90250K562SYNCRIP
BTF3L4ENSG00000134717.13640.678001835.95760-1.5189036.5319033.38080K562TARDBP
BTF3L4ENSG00000134717.131204.741401538.76300-0.353004.963404.03140K562UPF1
BTF3L4ENSG00000134717.131016.847501369.19800-0.429206.987805.69990K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BTF3L4 is not available on ENCORE database.





18 RBPs can affect the splicing of BTF3L4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBTF3L4ENSG00000134717.13chr1+525491115254921352530496525306105255178352551843-0.151000.000180.06418excludedK562IGF2BP2
SEBTF3L4ENSG00000134717.13chr1+5254901152549213525304965253061052551783525518430.103000.000060.00191includedK562SRSF1
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.147000.000010.03250excludedK562RPS3
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.161000.000010.00056excludedK562SF3B4
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.136000.000000.00081excludedHepG2PRPF8
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.157000.000000.00000excludedK562AKAP8L
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530443525306105255178352551843-0.122000.000020.00048excludedK562AQR
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.063000.000310.00643excludedK562PUS1
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.279000.000000.00000excludedK562PUS1
SEBTF3L4ENSG00000134717.13chr1+5252550652525573525217965252205152530496525306100.056000.001750.06821includedHepG2SFPQ
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.063000.002520.09927excludedK562EFTUD2
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.058000.002620.08609excludedHepG2MATR3
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.092000.000010.00033excludedK562U2AF1
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530503525306105255178352551843-0.135000.000010.00040excludedHepG2SF3A3
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.076000.000140.00755excludedK562UTP18
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.160000.000000.00001excludedK562UTP18
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.083000.000030.00109excludedK562U2AF2
SEBTF3L4ENSG00000134717.13chr1+5254901152549213525304965253061052551783525518430.116000.000000.00020includedK562HNRNPU
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.094000.000000.00019excludedK562RBM15
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.253000.000000.00000excludedK562RBM15
SEBTF3L4ENSG00000134717.13chr1+525255065252557352521796525220515253049652530610-0.063000.000400.01340excludedK562AGGF1
SEBTF3L4ENSG00000134717.13chr1+525490115254921352530496525306105255178352551843-0.208000.000000.00000excludedK562AGGF1
MXEBTF3L4ENSG00000134717.13chr1+52530496525306105254901152549213525219755252205152551783525518430.112000.002140.061021includedHepG2SF3A3
MXEBTF3L4ENSG00000134717.13chr1+52530496525306105254901152549213525219755252205152551783525518430.122000.000720.026021includedK562EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BTF3L4 is not avaliable on ENCORE database.