C22orf39

General Information

Gene Name       : C22orf39
Gene ID             : ENSG00000242259.8
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: C22orf39)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C22orf39ENSG00000242259.813.2514.1413.70ENCSR000AEF
HepG2C22orf39ENSG00000242259.822.7819.5321.16ENCSR985KAT
K562C22orf39ENSG00000242259.853.0946.1349.61ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C22orf39 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C22orf39 RNA is bound by 65 proteins.  







eCLIP assay for C22orf39 is not avaliable on ENCORE database.





65 proteins are bound to C22orf39 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr221938192919382005-3'-UTR,CDS,intron-Distal3.4510912.53535K562UPF1
chr221943078319430849-3'-UTR,intron-Distal,intron-Proximal3.0043811.07556K562UPF1
chr221938186619381927-3'-UTR,CDS,intron-Distal3.8107321.55151K562DDX24
chr221942851319428573-3'-UTR,intron-Distal3.1607810.31074K562FAM120A
chr221943001019430080-3'-UTR,intron-Distal3.063846.31194K562FAM120A
chr221934163019341678-3'-UTR,CDS,intron-Distal,intron-Proximal3.137953.66455K562SF3B4
chr221934161119341655-3'-UTR,CDS,intron-Distal,intron-Proximal3.166607.15216K562BUD13
chr221943102019431046-3'-UTR,intron-Distal3.477917.55751K562UPF1
chr221934686119346903-3'-UTR,CDS,intron-Distal3.087264.80218K562UCHL5
chr221942967319429778-3'-UTR,intron-Distal3.258379.72633K562YBX3
chr221943124719431322-3'-UTR,intron-Distal3.903316.73079K562FUS
chr221942846719428492-3'-UTR,intron-Distal3.091936.18673K562UPF1
chr221937966019379733-3'-UTR,CDS,intron-Distal3.8632121.55151K562DDX24
chr221938186519381929-3'-UTR,CDS,intron-Distal4.8929411.77875K562UPF1
chr221942846619428550-3'-UTR,intron-Distal4.870916.26284K562NOLC1
chr221943116719431233-3'-UTR,intron-Distal3.328133.34065K562IGF2BP1
chr221937530919375384-3'-UTR,CDS,intron-Distal,intron-Proximal3.662637.16774K562AQR
chr221934938919349426-3'-UTR,CDS,intron-Distal3.318435.30095HepG2PPIG
chr221943132219431404-3'-UTR,intron-Distal3.872275.42697K562FUS
chr221942959119429664-3'-UTR,intron-Distal3.220025.35032K562TAF15
chr221937114019371170-3'-UTR,CDS,intron-Distal,intron-Proximal3.866016.13978HepG2PPIG
chr221943097019431057-3'-UTR,intron-Distal4.909617.35095K562IGF2BP1
chr221938429019384371-3'-UTR,CDS,intron-Distal,intron-Proximal3.707713.02267HepG2SRSF1
chr221934162719341734-3'-UTR,CDS,intron-Distal,intron-Proximal4.341408.61283HepG2SF3B4
chr221933893119338998-3'-UTR,CDS,intron-Distal,intron-Proximal3.984865.60471HepG2U2AF2
chr221937971919379735-3'-UTR,CDS,intron-Distal3.498696.12893K562BUD13
chr221934447319344535-3'-UTR,CDS,intron-Distal3.153093.92696K562METAP2
chr221937601219376024-3'-UTR,CDS,intron-Distal3.199224.33023K562ZNF622
chr221938430819384355-3'-UTR,CDS,intron-Distal,intron-Proximal3.564367.36645HepG2PPIG
chr221934686819346898-3'-UTR,CDS,intron-Distal4.7744411.02544K562DDX24
chr221943117619431225-3'-UTR,intron-Distal3.340258.45527K562IGF2BP2
chr221934688019346951-3'-UTR,CDS,intron-Distal4.305356.65960HepG2BCLAF1
chr221938183319381884-3'-UTR,CDS,intron-Distal,intron-Proximal4.1077010.64040HepG2PRPF8
chr221942859219428633-3'-UTR,intron-Distal3.287576.42260K562FAM120A
chr221934682119346862-3'-UTR,CDS,intron-Distal,intron-Proximal3.416546.46344HepG2PRPF8
chr221934871419348764-3'-UTR,CDS,intron-Distal,intron-Proximal4.461416.39176K562AQR
chr221937972519379737-3'-UTR,CDS,intron-Distal3.042515.51984K562UCHL5
chr221943048719430522-3'-UTR,intron-Distal4.471598.66095K562UPF1
chr221938430719384372-3'-UTR,CDS,intron-Distal,intron-Proximal5.358798.98683K562LIN28B
chr221934100319341047-3'-UTR,CDS,intron-Distal,intron-Proximal4.494285.01842HepG2PRPF8
chr221937323419373332-3'-UTR,CDS,intron-Distal,intron-Proximal3.624753.67894HepG2AQR
chr221942864119428751-3'-UTR,intron-Distal4.4312440.79904K562UPF1
chr221938183319381884-3'-UTR,CDS,intron-Distal,intron-Proximal3.275637.03130K562PRPF8
chr221937304319373068-3'-UTR,CDS,intron-Distal,intron-Proximal4.206987.34123K562DDX24
chr221934160419341666-3'-UTR,CDS,intron-Distal,intron-Proximal4.162637.30031K562AQR
chr221938557119385617-3'-UTR,CDS,intron-Distal,intron-Proximal3.181374.38107K562AQR
chr221934692719347008-3'-UTR,CDS,intron-Distal,intron-Proximal4.2058414.40288K562PUM2
chr221934161019341634-3'-UTR,CDS,intron-Distal6.025699.53625K562DDX24
chr221934884919348863-3'-UTR,CDS,intron-Distal6.233219.53625K562DDX24
chr221934690519346970-3'-UTR,CDS,intron-Distal5.7316913.38683K562DDX24
chr221934871819348778-3'-UTR,CDS,intron-Distal,intron-Proximal6.1242110.77812HepG2PRPF8
chr221942895719429000-3'-UTR,intron-Distal3.6972617.17914K562UPF1
chr221934920719349256-3'-UTR,CDS,intron-Distal,intron-Proximal3.288995.90285HepG2PRPF8
chr221937603019376077-3'-UTR,CDS,intron-Distal4.5649419.62313K562DDX24
chr221942900019429037-3'-UTR,intron-Distal3.874148.64357K562UPF1
chr221938552219385597-3'-UTR,CDS,intron-Distal,intron-Proximal3.339987.40344HepG2PPIG
chr221942933619429401-3'-UTR,intron-Distal3.941273.69388HepG2XPO5
chr221938547219385522-3'-UTR,CDS,intron-Distal,intron-Proximal3.376886.40067K562PRPF8
chr221943019619430261-3'-UTR,intron-Distal4.0758612.75021K562UPF1
chr221943012319430170-3'-UTR,intron-Distal4.162267.44026K562YBX3
chr221937521719375237-3'-UTR,CDS,intron-Distal,intron-Proximal4.038676.32052K562AQR
chr221937597519376024-3'-UTR,CDS,intron-Distal,intron-Proximal4.940994.35676HepG2PRPF8
chr221942856019428581-3'-UTR,intron-Distal3.504388.00041K562UPF1
chr221942923519429304-3'-UTR,intron-Distal,intron-Proximal3.274286.67855K562FUS
chr221938547519385524-3'-UTR,CDS,intron-Distal,intron-Proximal3.738803.44979HepG2PRPF8
chr221943043919430459-3'-UTR,intron-Distal4.190137.12652K562UPF1
chr221943087719430945-3'-UTR,intron-Distal,intron-Proximal3.055545.59336K562FUS
chr221938546419385524-3'-UTR,CDS,intron-Distal,intron-Proximal4.0588111.08359K562AQR
chr221938560119385662-3'-UTR,CDS,intron-Distal,intron-Proximal3.2383110.56836K562SF3B4
chr221943061219430671-3'-UTR,intron-Distal4.020948.42016K562FUS
chr221937958019379630-3'-UTR,CDS,intron-Distal,intron-Proximal3.676918.10412K562PRPF8
chr221937962319379660-3'-UTR,CDS,intron-Distal,intron-Proximal4.2667718.56215K562DDX24
chr221937115019371219-3'-UTR,CDS,intron-Distal4.601346.78401HepG2GRWD1
chr221937323719373285-3'-UTR,CDS,intron-Distal,intron-Proximal3.831156.32052K562AQR
chr221934148519341539-3'-UTR,CDS,intron-Distal,intron-Proximal5.633948.72621HepG2PRPF8
chr221942858119428641-3'-UTR,intron-Distal4.2325717.35317K562UPF1
chr221937114419371228-3'-UTR,CDS,intron-Distal4.2744422.95648K562DDX24
chr221938188019381902-3'-UTR,CDS,intron-Distal3.170818.98598K562UCHL5
chr221934083219340881-3'-UTR,CDS,intron-Distal,intron-Proximal5.241448.04585HepG2PRPF8
chr221934150319341521-3'-UTR,CDS,intron-Distal,intron-Proximal3.916119.41329K562AQR
chr221942888919428946-3'-UTR,intron-Distal3.589486.38942K562FAM120A
chr221938552119385610-3'-UTR,CDS,intron-Distal,intron-Proximal4.2880228.45025K562DDX24
chr221938199019382032-3'-UTR,CDS,intron-Distal3.164686.57746K562BUD13
chr221937961119379625-3'-UTR,CDS,intron-Distal,intron-Proximal3.462667.70675K562AQR
chr221942900019429040-3'-UTR,intron-Distal3.148165.66512K562KHDRBS1
chr221942864519428756-3'-UTR,intron-Distal3.8690727.64001K562FAM120A
chr221942999819430091-3'-UTR,intron-Distal4.5263433.81727K562UPF1
chr221938430319384350-3'-UTR,CDS,intron-Distal,intron-Proximal3.416404.08943HepG2LIN28B
chr221937300119373046-3'-UTR,CDS,intron-Distal,intron-Proximal3.998736.50183HepG2PRPF8
chr221937597719376009-3'-UTR,CDS,intron-Distal,intron-Proximal3.156596.04213K562PRPF8
chr221943062719430659-3'-UTR,intron-Distal3.628428.27984K562UPF1
chr221934685619346899-3'-UTR,CDS,intron-Distal,intron-Proximal3.102675.74131HepG2PPIG
chr221942869219428743-3'-UTR,intron-Distal3.027435.61917K562LARP4
chr221937958219379644-3'-UTR,CDS,intron-Distal,intron-Proximal5.116249.76577HepG2PRPF8
chr221943053319430624-3'-UTR,intron-Distal3.2417812.76170K562FAM120A
chr221938188219381910-3'-UTR,CDS,intron-Distal4.228283.56019HepG2GRWD1
chr221943054519430612-3'-UTR,intron-Distal3.168176.67214K562FUS
chr221938186419381880-3'-UTR,CDS,intron-Distal,intron-Proximal4.039739.16086K562UCHL5
chr221937523919375282-3'-UTR,CDS,intron-Distal4.717414.38106HepG2PPIG
chr221936323719363266-3'-UTR,CDS,intron-Distal4.322384.00197K562METAP2
chr221943140419431542-3'-UTR,intron-Distal4.2381012.79964K562FUS
chr221933884019338898-3'-UTR,CDS,intron-Distal,intron-Proximal4.6403815.26505K562PRPF8
chr221943122519431291-3'-UTR,intron-Distal3.544476.75003K562IGF2BP2
chr221933885719338938-3'-UTR,CDS,intron-Distal,intron-Proximal4.5507916.86672HepG2PRPF8
chr221934925319349272-3'-UTR,CDS,intron-Distal6.1781211.96394K562DDX24
chr221943178319431909-3'-UTR,CDS,intron-Distal3.153805.71041K562FUS
chr221936552419365554-3'-UTR,CDS,intron-Distal3.467097.36517K562DDX24
chr221943078019430858-3'-UTR,intron-Distal,intron-Proximal3.137784.68798K562FUS
chr221937605419376101-3'-UTR,CDS,intron-Distal,intron-Proximal3.314045.28960K562AQR
chr221939470919394733-3'-UTR,5'-UTR,CDS,intron-Distal5.171147.21253K562UPF1
chr221939593319396013-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.7028115.20903K562EFTUD2
chr221939321819393321-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.8441421.66432K562EFTUD2
chr221943518719435218-5'-UTR,CDS,intron-Distal,intron-Proximal4.9137718.21461K562DDX3X
chr221939604819396103-3'-UTR,5'-UTR,CDS,intron-Distal4.007634.06501K562GRWD1
chr221939470419394733-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.347404.37001K562EFTUD2
chr221939325719393324-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.314534.64942HepG2EFTUD2
chr221939602019396113-3'-UTR,5'-UTR,CDS,intron-Distal3.7550110.57780K562LIN28B
chr221939593619396037-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.611666.79943K562RBM15
chr221939325619393316-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.204108.59407K562BUD13
chr221939326119393313-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.3703113.26139HepG2PRPF8
chr221943521519435259-5'-UTR,CDS,intron-Distal,intron-Proximal4.060113.48187K562RBM15
chr221939470619394791-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5241722.19654K562DDX24
chr221939594819396009-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0253211.70723K562AQR
chr221939594819396013-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.3257511.64365K562PRPF8
chr221939337419393459-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.7397214.68332K562SF3B4
chr221939606519396123-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0314312.23190K562BUD13
chr221939337419393435-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.6087616.15323K562AQR
chr221939475019394811-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0285210.68062K562EFTUD2
chr221939595719396025-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.072515.05356HepG2PRPF8
chr221943503519435054-5'-UTR,CDS,intron-Distal,intron-Proximal5.6380820.34516K562DDX3X
chr221943499519435035-5'-UTR,CDS,intron-Distal,intron-Proximal4.8729916.20885K562DDX3X
chr221943499719435039-5'-UTR,CDS,intron-Distal,intron-Proximal3.460693.58705K562IGF2BP2
chr221943490519434995-5'-UTR,CDS,intron-Distal,intron-Proximal3.6941213.09014K562DDX3X
chr221943190219431968-CDS,intron-Distal3.165526.43602K562SF3B4
chr221939825819398312-5'-UTR,CDS,intron-Distal,intron-Proximal4.2817817.27660K562U2AF2
chr221939820919398309-5'-UTR,CDS,intron-Distal,intron-Proximal3.0873411.06697K562EFTUD2
chr221939826019398314-5'-UTR,CDS,intron-Distal,intron-Proximal3.8511615.68786HepG2U2AF2
chr221939824119398280-5'-UTR,CDS,intron-Distal3.3707611.85307K562DDX24
chr221939823819398313-5'-UTR,CDS,intron-Distal,intron-Proximal3.783959.57067K562U2AF1
chr221943490019435054-5'-UTR,CDS,intron-Distal,intron-Proximal3.067803.44854HepG2LARP4
chr221939826019398287-5'-UTR,CDS,intron-Distal3.544228.34074HepG2PPIG
chr221939823919398291-5'-UTR,CDS,intron-Distal3.702263.05512HepG2PRPF4
chr221943190219431979-CDS,intron-Distal3.598096.15802K562XRN2
chr221943503619435078-5'-UTR,CDS,intron-Distal,intron-Proximal3.893283.53770HepG2DDX3X
chr221943190919431973-CDS,intron-Distal4.123878.04581K562FUS
chr221943505419435068-5'-UTR,CDS,intron-Distal,intron-Proximal4.9716217.81304K562DDX3X
chr221939823719398260-5'-UTR,CDS,intron-Distal,intron-Proximal3.399229.47710HepG2PPIG
chr221943191119431982-CDS,intron-Distal3.327754.73413K562SAFB
chr221943367019433760-intron-Distal3.368353.51116K562LSM11
chr221938670919386764-intron-Distal3.408237.00923K562SF3B4
chr221933883419338880-intron-Distal,intron-Proximal3.475904.41130K562AQR
chr221941802319418083-intron-Distal5.365274.22343HepG2XPO5
chr221938937819389429-intron-Distal3.597694.97701K562HNRNPA1
chr221934371019343721-intron-Distal,intron-Proximal3.998104.49024K562AQR
chr221935990419359967-intron-Distal3.033014.72062K562KHDRBS1
chr221935885719358912-intron-Distal4.037333.49896K562KHDRBS1
chr221942825219428313-intron-Distal,intron-Proximal3.609675.56248K562SAFB2
chr221936559219365642-intron-Distal,intron-Proximal5.116907.71578HepG2SF3B4
chr221941883219418898-intron-Distal3.837123.77567K562NONO
chr221941770119417776-intron-Distal4.384183.97018HepG2HNRNPM
chr221939462519394677-intron-Distal,intron-Proximal4.848495.09266K562RBM22
chr221938957019389656-intron-Distal3.070543.93430K562FUS
chr221934327519343311-CDS,intron-Distal,intron-Proximal4.692697.50842K562DDX24
chr221939306319393142-intron-Distal3.5194310.34300K562SF3B4
chr221938447219384566-intron-Distal,intron-Proximal4.0619510.79618K562SF3B4
chr221939576219395845-intron-Distal3.0811810.14566K562PRPF8
chr221938917419389254-intron-Distal3.639716.40619K562SAFB
chr221938954519389617-intron-Distal3.167484.81605K562TAF15
chr221936069319360761-intron-Distal3.466774.69565K562KHDRBS1
chr221937957319379611-intron-Distal,intron-Proximal4.5374110.81562K562AQR
chr221938942919389506-intron-Distal4.9300112.21149K562GTF2F1
chr221939302019393061-intron-Distal4.104246.35873K562PRPF8
chr221941894719418963-intron-Distal4.5148320.31277K562AQR
chr221942822919428306-intron-Distal4.209447.63628K562SLTM
chr221941901319419233-5'-UTR,intron-Distal,intron-Proximal4.5927421.39624HepG2PRPF4
chr221941902119419180-5'-UTR,intron-Distal5.2363717.20156HepG2GTF2F1
chr221941915719419250-5'-UTR,intron-Distal,intron-Proximal3.733676.17457K562FUS
chr221941903119419148-5'-UTR,intron-Distal3.388314.57030HepG2FTO
chr221934167819341732-intron-Distal,intron-Proximal4.488175.16342K562SF3B4
chr221941905319419167-5'-UTR,intron-Distal3.090633.78918HepG2CDC40
chr221937289819372993-intron-Distal,intron-Proximal4.1007320.86296K562AQR
chr221934372119343752-intron-Distal,intron-Proximal3.413133.94787K562AQR
chr221938182419381863-intron-Distal,intron-Proximal3.932625.26367K562AQR
chr221937953719379567-intron-Distal,intron-Proximal4.405174.22101K562PRPF8
chr221938723419387290-intron-Distal3.348693.95154K562SAFB2
chr221941914519419249-5'-UTR,intron-Distal,intron-Proximal5.009337.22444HepG2NCBP2
chr221939808119398184-intron-Distal,intron-Proximal3.738326.59336K562KHSRP
chr221941882919418956-intron-Distal3.335846.17487K562CSTF2T
chr221939588719395934-intron-Distal,intron-Proximal3.822439.05957K562BUD13
chr221939832119398355-intron-Distal,intron-Proximal4.908235.40008K562SF3B4
chr221941079619410857-intron-Distal4.6834420.58016K562EIF4G2
chr221941911619419185-5'-UTR,intron-Distal3.649463.34940K562HNRNPM
chr221942803019428085-intron-Distal4.218505.16344K562SAFB2
chr221941889219418949-intron-Distal3.723467.65809K562PRPF8
chr221941901819419117-5'-UTR,intron-Distal3.308045.11859K562RPS11
chr221935971219359785-intron-Distal3.364645.87795K562KHDRBS1
chr221941096019411023-intron-Distal5.868228.72775K562IGF2BP1
chr221940964019409711-intron-Distal4.221093.87294K562TARDBP
chr221941876019418801-intron-Distal3.225933.36616K562NONO
chr221943198319432081-intron-Distal3.784079.05428K562FUS
chr221939306819393121-intron-Distal3.474717.76128K562PRPF8
chr221933932119339560-intron-Distal5.7399312.98267K562HNRNPK
chr221935966519359712-intron-Distal3.943003.91018K562KHDRBS1
chr221941903019419127-5'-UTR,intron-Distal3.334527.57209K562FAM120A
chr221936314519363154-intron-Distal,intron-Proximal4.4466211.32600K562AQR
chr221939464519394706-intron-Distal,intron-Proximal4.8827911.42662K562AQR
chr221943224819432360-intron-Distal3.493105.50444K562HNRNPK
chr221938840119388445-intron-Distal3.763675.37814HepG2HNRNPM
chr221938659019386692-intron-Distal4.370768.51520K562DDX24
chr221941093919411030-intron-Distal4.018903.35522K562SRSF7
chr221941911919419237-5'-UTR,intron-Distal,intron-Proximal4.542257.63469K562DDX3X
chr221941093519411026-intron-Distal4.1495914.49701K562TARDBP
chr221939575519395812-intron-Distal3.244387.02925K562AQR
chr221937517019375217-intron-Distal,intron-Proximal5.819798.88118K562AQR
chr221933932219339433-intron-Distal3.789806.29348HepG2HNRNPK
chr221941891919418969-CDS,intron-Distal4.624754.62947HepG2AQR
chr221934684719346858-intron-Distal,intron-Proximal5.424418.43521K562AQR
chr221941900719419149-5'-UTR,intron-Distal3.6286672.75321K562GEMIN5
chr221941900619419103-5'-UTR,intron-Distal3.372563.51824HepG2EIF3D
chr221941900119419092-5'-UTR,intron-Distal3.776249.11524K562UCHL5
chr221940235619402413-intron-Distal3.319026.04483HepG2ILF3
chr221937597019376006-intron-Distal,intron-Proximal5.090315.17615K562AQR
chr221939293519392986-intron-Distal4.8082410.64121K562AQR
chr221940636919406468-intron-Distal3.664715.63970K562TARDBP
chr221938561419385655-intron-Distal,intron-Proximal3.848778.03271HepG2SF3A3
chr221942803919428072-intron-Distal3.997423.36882K562SLTM
chr221938944419389538-intron-Distal4.885133.59762HepG2EXOSC5
chr221939056619390630-intron-Distal3.577514.89798K562HNRNPC
chr221939569619395752-intron-Distal3.0335311.77345K562EFTUD2
chr221941901819419154-5'-UTR,intron-Distal3.6385224.45310K562DDX51
chr221933901319339037-intron-Distal,intron-Proximal4.290805.44709K562KHSRP
chr221934081819340864-intron-Distal,intron-Proximal4.808247.92018K562AQR
chr221941803919418119-intron-Distal4.168008.89959K562NONO
chr221939395619394009-intron-Distal3.230543.12255HepG2XPO5
chr221941901219419149-5'-UTR,intron-Distal3.9490130.00284K562DDX24
chr221937299319373011-intron-Distal,intron-Proximal4.5567515.12840K562AQR
chr221934334319343388-CDS,intron-Distal4.245235.23082K562DDX24
chr221937106219371139-intron-Distal,intron-Proximal3.830629.14595K562PRPF8
chr221938944519389493-intron-Distal3.300093.91933K562EXOSC5
chr221940235519402414-intron-Distal3.587086.10043K562ILF3
chr221939330219393309-intron-Distal,intron-Proximal5.9936126.08882K562AQR
chr221939262719392696-intron-Distal5.213477.60539K562LIN28B
chr221941902219419116-5'-UTR,intron-Distal4.8830118.50180HepG2EFTUD2
chr221937303219373043-intron-Distal,intron-Proximal4.3197911.08359K562AQR
chr221938908119389123-intron-Distal4.238364.31871HepG2HNRNPM
chr221933898219339013-intron-Distal,intron-Proximal3.710036.69500K562KHSRP
chr221941090119411020-intron-Distal6.3181741.22154K562EIF4G2
chr221939323719393304-intron-Distal,intron-Proximal3.520053.62357HepG2U2AF2
chr221941910319419162-5'-UTR,intron-Distal3.895196.56013K562FTO
chr221941460719414664-intron-Distal3.190313.37821K562ILF3
chr221943386819433971-intron-Distal3.688966.13606K562TAF15
chr221934324519343272-intron-Distal,intron-Proximal5.7683811.02807K562AQR
chr221934327219343283-intron-Distal,intron-Proximal4.628629.04436K562AQR
chr221941891919418975-CDS,intron-Distal3.8041616.71348HepG2PRPF8
chr221939588219395933-intron-Distal,intron-Proximal3.7469713.50820K562EFTUD2
chr221939311119393205-intron-Distal3.7703213.52619K562EFTUD2
chr221941874619418819-intron-Distal4.855554.82934K562RBM15
chr221939588419395948-intron-Distal,intron-Proximal3.884439.06608K562AQR
chr221934145919341503-intron-Distal,intron-Proximal6.1638114.81397K562AQR
chr221941734219417447-intron-Distal3.4600017.07311K562KHSRP
chr221939302319393102-intron-Distal3.610699.06608K562AQR
chr221933981719339922-intron-Distal4.370186.11515K562PTBP1
chr221939249319392549-intron-Distal3.237993.91534K562HNRNPA1
chr221937590719375920-intron-Distal,intron-Proximal4.366174.22101K562PRPF8
chr221938954319389651-intron-Distal3.346124.13986HepG2TAF15
chr221933921919339311-intron-Distal4.722576.49770K562HNRNPK
chr221941914919419262-5'-UTR,intron-Distal,intron-Proximal3.292748.67414K562NCBP2
chr221939569319395752-intron-Distal3.209293.19036K562XRN2
chr221934681619346847-intron-Distal,intron-Proximal5.577079.95272K562AQR
chr221938808819388140-intron-Distal3.697493.14313K562SAFB
chr221938849119388526-intron-Distal3.167983.43829K562EXOSC5
chr221941861219418645-intron-Distal4.306924.23759K562NONO
chr221936311019363145-intron-Distal,intron-Proximal6.1385014.27141K562AQR
chr221934921719349249-intron-Distal,intron-Proximal4.156597.35008K562PRPF8
chr221939322519393302-intron-Distal,intron-Proximal5.2814633.15828K562AQR
chr221941901419419132-5'-UTR,intron-Distal5.2897726.69017K562GTF2F1
chr221941902219419107-5'-UTR,intron-Distal4.708744.10924HepG2ZNF800
chr221941897819419164-5'-UTR,CDS,intron-Distal3.244713.46298HepG2SRSF1
chr221941092519410960-intron-Distal4.683687.44045K562IGF2BP1
chr221939589219395923-intron-Distal,intron-Proximal3.384056.06342K562UPF1
chr221937289419372969-intron-Distal,intron-Proximal5.214328.03275K562GPKOW
chr221941899319419123-5'-UTR,CDS,intron-Distal3.7689015.94569K562CSTF2T
chr221939459919394637-intron-Distal,intron-Proximal3.497434.63311K562AQR
chr221941902419419168-5'-UTR,intron-Distal3.082676.47196K562ABCF1
chr221941085719410901-intron-Distal5.4752116.78191K562EIF4G2
chr221939592919395984-intron-Distal,intron-Proximal4.367237.38946K562RBM22
chr221941913219419178-5'-UTR,intron-Distal3.767385.31818K562GTF2F1
chr221941903819419131-5'-UTR,intron-Distal3.0414613.94788HepG2FAM120A
chr221941883519418892-intron-Distal3.903714.93376K562PRPF8
chr221938850819388650-intron-Distal4.997965.43487HepG2EXOSC5
chr221941905519419119-5'-UTR,intron-Distal3.644064.43286K562TBRG4
chr221937947819379509-intron-Distal3.545394.23459K562PRPF8
chr221934385319343955-intron-Distal,intron-Proximal3.377194.38865HepG2RBFOX2
chr221938872119388801-intron-Distal3.994673.91527K562PPIL4
chr221934462419344755-intron-Distal,intron-Proximal3.958383.06617K562HNRNPK
chr221941903619419261-5'-UTR,intron-Distal,intron-Proximal3.2549125.26209HepG2DDX3X
chr221941891219418947-intron-Distal5.4220223.36607K562AQR
chr221943257519432642-intron-Distal3.023243.70419K562KHDRBS1
chr221940725319407307-intron-Distal4.6309912.46447K562LIN28B
chr221939594519395985-intron-Distal,intron-Proximal3.186398.61034K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C22orf39 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C22orf39 is not available on ENCORE database.

  • 85 RBPs can affect the levels of C22orf39.  








The Knockdown/knockout RNA-Seq assay for C22orf39 is not available on ENCORE database.





85 RBPs can affect the gene expression of C22orf39 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C22orf39ENSG00000242259.4369.79620460.97620-0.318002.148501.55190HepG2CKAP4
C22orf39ENSG00000242259.4204.69530299.88990-0.551002.688302.00910HepG2CPSF6
C22orf39ENSG00000242259.4504.05630615.63710-0.288501.950601.39260HepG2CELF1
C22orf39ENSG00000242259.4223.94060362.45970-0.694703.658902.78350HepG2DDX55
C22orf39ENSG00000242259.4259.51950358.92560-0.467802.909002.19060HepG2DNAJC21
C22orf39ENSG00000242259.4483.57440625.59750-0.371502.175801.44670HepG2EIF4G2
C22orf39ENSG00000242259.4335.85990450.55050-0.423802.580201.77460HepG2EWSR1
C22orf39ENSG00000242259.4463.27220608.36560-0.393102.794201.85710HepG2HNRNPA2B1
C22orf39ENSG00000242259.4737.45870561.979700.391902.457701.79740HepG2HNRNPK
C22orf39ENSG00000242259.4480.34410603.00830-0.328102.681502.01760HepG2HNRNPL
C22orf39ENSG00000242259.4515.20710324.399400.667304.674003.87670HepG2HNRNPLL
C22orf39ENSG00000242259.4418.52740564.15420-0.430802.348401.72050HepG2IGF2BP2
C22orf39ENSG00000242259.4449.43210598.49720-0.413202.265101.66920HepG2MAGOH
C22orf39ENSG00000242259.4483.26380656.40880-0.441803.749902.85940HepG2NOL12
C22orf39ENSG00000242259.4266.29410396.32180-0.573703.199402.29600HepG2PARN
C22orf39ENSG00000242259.4411.68280572.00230-0.474504.430503.69280HepG2PCBP1
C22orf39ENSG00000242259.4306.84140447.86930-0.545602.588201.58170HepG2PCBP2
C22orf39ENSG00000242259.4397.64290582.01920-0.549605.571204.84980HepG2PTBP1
C22orf39ENSG00000242259.4491.90500626.59680-0.349202.158201.62300HepG2PUF60
C22orf39ENSG00000242259.4342.01590665.15680-0.9596017.5564016.32960HepG2PUM1
C22orf39ENSG00000242259.4527.20060664.67300-0.334302.248501.64090HepG2PUM2
C22orf39ENSG00000242259.4244.84260432.21560-0.819903.587102.78670HepG2RAVER1
C22orf39ENSG00000242259.4441.77760617.81290-0.483803.980003.38770HepG2RBM22
C22orf39ENSG00000242259.4491.77570647.74350-0.397403.277702.69880HepG2NELFE
C22orf39ENSG00000242259.4181.40790294.09730-0.697104.238503.49250HepG2RPS19
C22orf39ENSG00000242259.4191.17390276.57630-0.532802.121801.42550HepG2RRP9
C22orf39ENSG00000242259.4271.20610704.44340-1.377104.034602.32590HepG2SF1
C22orf39ENSG00000242259.4202.41880321.07820-0.665603.805502.98890HepG2SF3B1
C22orf39ENSG00000242259.4379.25850605.98310-0.676107.642706.73860HepG2SF3B4
C22orf39ENSG00000242259.4294.11970629.98270-1.098902.852801.51970HepG2SNRNP200
C22orf39ENSG00000242259.4401.84660697.80050-0.7962011.9175011.07180HepG2SRFBP1
C22orf39ENSG00000242259.4396.44460618.66900-0.642007.003606.07200HepG2SRSF5
C22orf39ENSG00000242259.4388.32930514.56700-0.406103.302402.71010HepG2SRSF9
C22orf39ENSG00000242259.4589.23970429.412700.456402.392401.37980HepG2STIP1
C22orf39ENSG00000242259.4543.75030703.60060-0.371803.549102.86100HepG2SUCLG1
C22orf39ENSG00000242259.4259.20300360.81920-0.477202.010301.42000HepG2SUPV3L1
C22orf39ENSG00000242259.4700.49470568.490200.301102.066801.56930HepG2TAF15
C22orf39ENSG00000242259.4298.78610389.02490-0.380702.135001.68490HepG2TIAL1
C22orf39ENSG00000242259.4310.98120392.55520-0.336101.958101.46760HepG2TRIM56
C22orf39ENSG00000242259.4288.46610421.11430-0.545803.330602.64700HepG2U2AF1
C22orf39ENSG00000242259.4460.36280647.95070-0.493102.536301.73570HepG2UBE2L3
C22orf39ENSG00000242259.4297.69350213.144400.481902.230001.54820HepG2UCHL5
C22orf39ENSG00000242259.4605.07650444.732200.444103.940003.24380HepG2UTP3
C22orf39ENSG00000242259.41310.886701647.87850-0.330102.858101.65570K562AARS
C22orf39ENSG00000242259.43214.911602738.592700.231203.248402.64290K562AGGF1
C22orf39ENSG00000242259.43828.547703009.341500.347203.609102.44900K562AKAP8
C22orf39ENSG00000242259.43385.017002849.640200.248302.065201.49840K562AKAP8L
C22orf39ENSG00000242259.42559.061203217.39170-0.330303.852702.35660K562APOBEC3C
C22orf39ENSG00000242259.41723.949601274.267700.435903.779302.75910K562BOP1
C22orf39ENSG00000242259.42443.874501943.494800.330403.677401.91400K562CEBPZ
C22orf39ENSG00000242259.43735.328502505.548400.576003.521702.29750K562CNOT7
C22orf39ENSG00000242259.41743.363901468.640300.247302.321201.36970K562CSTF2
C22orf39ENSG00000242259.45769.533104484.471200.363404.689703.40860K562CELF1
C22orf39ENSG00000242259.42809.802202233.811600.330904.899403.26370K562DDX21
C22orf39ENSG00000242259.42496.936602011.622800.311703.168502.04660K562DDX3X
C22orf39ENSG00000242259.42037.387502763.83170-0.439908.631707.56170K562DDX47
C22orf39ENSG00000242259.41118.852402101.68830-0.9095016.9867014.80890K562EIF4A3
C22orf39ENSG00000242259.42304.911401611.507500.516206.144504.84740K562FIP1L1
C22orf39ENSG00000242259.41733.277801378.656800.330102.620201.78870K562FMR1
C22orf39ENSG00000242259.41662.798001168.596200.508704.642903.42860K562FTO
C22orf39ENSG00000242259.41381.716302185.67410-0.6616014.7846013.49820K562FXR1
C22orf39ENSG00000242259.43531.664202330.845700.599402.673101.48050K562HNRNPA2B1
C22orf39ENSG00000242259.41397.747901802.48310-0.366903.666802.99220K562HNRNPC
C22orf39ENSG00000242259.43510.502102804.960700.323604.406803.26900K562HNRNPU
C22orf39ENSG00000242259.44005.397703024.144200.405305.390604.15830K562KIF1C
C22orf39ENSG00000242259.41515.491401104.622600.456102.929301.96410K562KRR1
C22orf39ENSG00000242259.41217.242501746.29540-0.520706.218804.02660K562LARP7
C22orf39ENSG00000242259.41527.209602224.11220-0.542307.515606.10380K562MAGOH
C22orf39ENSG00000242259.43516.379702894.879600.280502.879101.77690K562MAK16
C22orf39ENSG00000242259.41646.815702219.64290-0.430605.114703.81340K562MATR3
C22orf39ENSG00000242259.41622.489701262.607000.361703.284402.32930K562METAP2
C22orf39ENSG00000242259.42689.443802094.437200.360605.642604.51420K562MTPAP
C22orf39ENSG00000242259.43096.838202374.612900.383002.487701.66110K562NAA15
C22orf39ENSG00000242259.43190.505202327.098300.4552014.9395013.39780K562NSUN2
C22orf39ENSG00000242259.43760.850302038.956800.883105.300403.80640K562PABPN1
C22orf39ENSG00000242259.41371.537201978.96040-0.528906.502504.98690K562PCBP2
C22orf39ENSG00000242259.41397.761001673.15460-0.259502.246901.52510K562POLR2G
C22orf39ENSG00000242259.42326.164401829.478200.346402.998102.13990K562PPIG
C22orf39ENSG00000242259.4838.959101585.82330-0.9186014.0744012.37320K562PRPF8
C22orf39ENSG00000242259.41419.657402160.84320-0.606109.768908.57660K562PTBP1
C22orf39ENSG00000242259.43045.052703978.39450-0.385704.143603.15180K562PUF60
C22orf39ENSG00000242259.44873.292502825.987400.7860014.0451012.86530K562PUS1
C22orf39ENSG00000242259.43662.017102753.560100.411206.928306.01780K562RBM15
C22orf39ENSG00000242259.41479.015302072.14430-0.486505.420904.19830K562RBM22
C22orf39ENSG00000242259.41666.781402180.56440-0.387603.356702.13860K562NELFE
C22orf39ENSG00000242259.41040.133301615.20560-0.634906.170404.94370K562RPS19
C22orf39ENSG00000242259.41526.400502024.78510-0.407603.344002.23430K562RPS3
C22orf39ENSG00000242259.41037.507301490.83430-0.523006.086104.47590K562SAFB
C22orf39ENSG00000242259.4940.576301871.51160-0.9926024.4072021.64980K562SF3B4
C22orf39ENSG00000242259.42796.661601993.469700.488309.443507.26060K562SRSF7
C22orf39ENSG00000242259.41693.232001415.147600.258702.698301.44040K562SSB
C22orf39ENSG00000242259.42607.870401933.735600.431403.799802.29370K562STAU1
C22orf39ENSG00000242259.41121.478401535.18030-0.453003.562902.39510K562SUPV3L1
C22orf39ENSG00000242259.41130.580001678.22350-0.569908.502907.06030K562SYNCRIP
C22orf39ENSG00000242259.42992.314802111.337000.503006.967905.53810K562WDR3
C22orf39ENSG00000242259.44998.508403554.467300.491806.829605.37740K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C22orf39 is not available on ENCORE database.





1 RBPs can affect the splicing of C22orf39 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC22orf39ENSG00000242259.4chr22-194316931943191319428408194292171943490019435068-0.129000.000010.00311excludedK562FMR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C22orf39 is not avaliable on ENCORE database.