CROCC

General Information

Gene Name       : CROCC
Gene ID             : ENSG00000058453.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CROCC)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CROCCENSG00000058453.160.652.011.33ENCSR000AEF
HepG2CROCCENSG00000058453.1611.174.457.81ENCSR985KAT
K562CROCCENSG00000058453.165.665.665.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CROCC is not avaliable on ENCORE database.



Proteins bound to RNA
  • CROCC RNA is bound by 8 proteins.  







eCLIP assay for CROCC is not avaliable on ENCORE database.





8 proteins are bound to CROCC RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11727275317272786+CDS,intron-Proximal3.176534.24993HepG2PPIG
chr11706702617067037+intron-Distal6.3818425.57836HepG2TAF15
chr11722257917222643+intron-Distal5.5527627.67561K562GEMIN5
chr11706701217067040+intron-Distal5.4629110.66153K562WRN
chr11723170217231741+intron-Distal3.455265.28491K562KHSRP
chr11706701217067014+intron-Distal6.3488625.12908HepG2TAF15
chr11719913817199156+intron-Distal4.592759.12317K562NSUN2
chr11718846917188490+intron-Distal5.37440400.00000HepG2XPO5
chr11718842617188469+intron-Distal5.3465029.28831HepG2XPO5
chr11718846717188500+intron-Distal6.95901400.00000K562NSUN2
chr11723174117231830+intron-Distal4.375226.48117K562KHSRP
chr11706701117067014+intron-Distal11.08570146.92941K562GEMIN5
chr11718849017188500+intron-Distal5.26612400.00000HepG2XPO5
chr11718846117188467+intron-Distal4.06496400.00000K562NSUN2
chr11719913117199138+intron-Distal4.592759.12317K562NSUN2
chr11729771717297811+intron-Distal4.913164.67055K562EIF4G2
chr11706702717067035+intron-Distal11.19910169.98538K562GEMIN5
chr11706701417067026+intron-Distal6.3818425.57836HepG2TAF15
chr11706701417067026+intron-Distal11.19910169.98538K562GEMIN5
chr11720018917200235+intron-Distal,intron-Proximal7.7114820.96333K562GEMIN5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CROCC is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CROCC is not available on ENCORE database.

  • 69 RBPs can affect the levels of CROCC.  








The Knockdown/knockout RNA-Seq assay for CROCC is not available on ENCORE database.





69 RBPs can affect the gene expression of CROCC :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CROCCENSG00000058453.12202.64890116.997800.792402.626701.70890HepG2ABCF1
CROCCENSG00000058453.12205.07710147.524700.475102.150201.59950HepG2ACO1
CROCCENSG00000058453.1283.2973036.328801.197102.432101.55480HepG2BCCIP
CROCCENSG00000058453.12145.6416082.469400.820403.030002.40660HepG2BOP1
CROCCENSG00000058453.12251.56220142.250600.822403.840302.67830HepG2CCAR1
CROCCENSG00000058453.12126.2606075.706000.737802.233901.60760HepG2CPSF6
CROCCENSG00000058453.1278.8367036.694901.103202.897902.24270HepG2CELF1
CROCCENSG00000058453.1252.0448020.752201.326403.270202.57140HepG2DNAJC2
CROCCENSG00000058453.12138.5299058.529101.242902.866602.26370HepG2EIF2S1
CROCCENSG00000058453.12250.35670156.191500.680604.047503.34450HepG2ETF1
CROCCENSG00000058453.1289.3486035.926901.314305.175804.27800HepG2HNRNPL
CROCCENSG00000058453.1292.4531052.733700.809902.193001.54370HepG2IGF2BP1
CROCCENSG00000058453.1268.5600026.691801.360902.575801.43640HepG2KHDRBS1
CROCCENSG00000058453.12134.3990065.354201.040103.184502.48130HepG2MAGOH
CROCCENSG00000058453.12150.9814065.702901.200202.816202.18030HepG2MATR3
CROCCENSG00000058453.12113.6742039.113301.539107.736906.47930HepG2NOL12
CROCCENSG00000058453.12121.2306032.832201.884506.147504.47790HepG2NONO
CROCCENSG00000058453.1282.1024020.843901.977708.173206.95440HepG2PPIL4
CROCCENSG00000058453.1290.3552037.340401.274804.481503.74330HepG2PUF60
CROCCENSG00000058453.12123.7581039.642401.642309.740508.77120HepG2PUM1
CROCCENSG00000058453.1280.96360130.54630-0.689202.192401.71660HepG2RBM22
CROCCENSG00000058453.12116.0522036.499701.668705.749004.30480HepG2RBM27
CROCCENSG00000058453.12151.0028080.754000.902903.814503.19880HepG2NELFE
CROCCENSG00000058453.12147.1701075.219700.968204.370203.61920HepG2RECQL
CROCCENSG00000058453.12102.0183033.650901.600003.363302.48210HepG2RPS2
CROCCENSG00000058453.12116.9216028.122602.055609.384107.94160HepG2RPS3A
CROCCENSG00000058453.1267.9365020.813801.706503.458302.75240HepG2SAFB2
CROCCENSG00000058453.1279.5558026.480701.586904.975803.22450HepG2SART3
CROCCENSG00000058453.12131.9829075.540400.804903.006502.39350HepG2SF3B4
CROCCENSG00000058453.1289.7573035.811601.325505.209004.29550HepG2SLBP
CROCCENSG00000058453.1217.6153078.85180-2.162307.270306.58830HepG2SRSF1
CROCCENSG00000058453.12109.9238036.872901.575807.353406.39960HepG2SRSF5
CROCCENSG00000058453.1270.6192024.484501.528103.719402.42610HepG2STIP1
CROCCENSG00000058453.12107.8236041.930601.362503.108202.45620HepG2SUCLG1
CROCCENSG00000058453.1220.1800070.88620-1.812605.763905.00560HepG2TAF15
CROCCENSG00000058453.1277.9088022.726101.777302.499202.01970HepG2TIAL1
CROCCENSG00000058453.1285.0902022.908801.893005.425904.68720HepG2TRIM56
CROCCENSG00000058453.1296.4153036.486401.401802.114101.35900HepG2TUFM
CROCCENSG00000058453.1277.2285025.192901.616005.419303.88050HepG2XPO5
CROCCENSG00000058453.1291.9652034.999601.393703.412302.61260HepG2XRN2
CROCCENSG00000058453.1294.0960041.476501.181703.805302.34740K562ABCF1
CROCCENSG00000058453.1264.3508021.587601.575703.766101.75080K562ADAR
CROCCENSG00000058453.1285.2949027.934701.610304.472503.23590K562BCLAF1
CROCCENSG00000058453.1272.6358021.138601.780705.906804.21250K562CCAR1
CROCCENSG00000058453.12201.91060109.737200.879604.847403.24860K562CCDC124
CROCCENSG00000058453.12159.8371076.105901.070405.265403.70580K562CPEB4
CROCCENSG00000058453.1255.9730022.763601.297902.756101.97590K562CPSF6
CROCCENSG00000058453.1275.2817021.192701.828603.435102.23650K562CSTF2
CROCCENSG00000058453.12144.4884084.812900.768503.253201.93480K562DDX21
CROCCENSG00000058453.12128.1630034.609501.888609.080507.89150K562EIF2S2
CROCCENSG00000058453.1272.8144030.654001.248003.738702.23230K562EXOSC5
CROCCENSG00000058453.1253.9550019.642901.457603.193702.20650K562FTO
CROCCENSG00000058453.1236.3325074.69650-1.039802.926202.30620K562FXR1
CROCCENSG00000058453.12116.4361069.087800.752902.633001.51880K562GLRX3
CROCCENSG00000058453.1253.6042021.729901.302602.682001.89890K562GPKOW
CROCCENSG00000058453.12112.0143046.109801.280404.224803.29330K562GRSF1
CROCCENSG00000058453.1265.7882024.731001.411403.388002.73680K562HNRNPC
CROCCENSG00000058453.1257.0854026.628501.100102.190001.30680K562IGF2BP2
CROCCENSG00000058453.1262.9661021.212401.569603.970602.90870K562METAP2
CROCCENSG00000058453.1235.5724079.62140-1.162402.701001.83030K562NAA15
CROCCENSG00000058453.12193.2538080.705301.259708.635507.41950K562NSUN2
CROCCENSG00000058453.1253.1065022.179601.259602.337201.51180K562PSIP1
CROCCENSG00000058453.12215.32390106.848801.010802.911701.92790K562PUM2
CROCCENSG00000058453.1254.6674094.76070-0.793602.092901.60810K562PUS1
CROCCENSG00000058453.1267.6538022.548601.585004.289501.87510K562RBFOX2
CROCCENSG00000058453.1219.7847083.53120-2.077902.437501.33870K562SF1
CROCCENSG00000058453.1257.3132026.969001.087502.452901.78430K562TARDBP
CROCCENSG00000058453.1257.5366026.015101.145002.539901.76000K562TIA1
CROCCENSG00000058453.12158.4325085.573600.888504.355603.47370K562UPF1
CROCCENSG00000058453.1270.6338034.072901.051602.668801.49030K562UTP3
CROCCENSG00000058453.12116.2281073.222500.666502.109001.34610K562WDR3
CROCCENSG00000058453.1269.9272021.423101.706604.635602.92150K562XRN2
CROCCENSG00000058453.12146.3468073.004001.003204.774003.59390K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CROCC is not available on ENCORE database.






No RBPs affect the alternative splcing events of CROCC on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CROCC is not avaliable on ENCORE database.