AC073236.3

General Information

Gene Name       : AC073236.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC073236.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC073236.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC073236.3 RNA is bound by 11 proteins.  







eCLIP assay for AC073236.3 is not avaliable on ENCORE database.





11 proteins are bound to AC073236.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7153104792153104818-intron-Distal5.0720419.43871K562HNRNPL
chr7153103593153103675-intron-Distal3.433889.56157K562SAFB2
chr7153105351153105450-intron-Distal3.6735212.71010K562KHDRBS1
chr7153105193153105210-intron-Distal3.745636.05266K562KHDRBS1
chr7153106230153106299-intron-Distal3.059817.15650K562SAFB2
chr7153104752153104765-intron-Distal5.1076310.25190K562HNRNPL
chr7153101239153101297-intron-Distal3.678154.48570K562HNRNPL
chr7153106354153106412-intron-Distal3.384568.41517K562KHDRBS1
chr7153102791153102851-intron-Distal3.038733.81801K562TAF15
chr7153104861153104916-intron-Distal5.1800334.91441K562HNRNPL
chr7153105210153105255-intron-Distal3.162907.38497K562KHDRBS1
chr7153107240153107290-intron-Distal4.255123.62737K562HNRNPK
chr7153105574153105655-intron-Distal3.187789.96734K562KHDRBS1
chr7153104724153104821-intron-Distal3.310118.14994K562SAFB
chr7153104916153104972-intron-Distal4.2736018.17611K562HNRNPL
chr7153097604153097667-intron-Distal3.619165.35619K562AQR
chr7153105030153105114-intron-Distal4.1189116.26692K562HNRNPL
chr7153104863153104964-intron-Distal4.049158.35056K562GTF2F1
chr7153097927153097988-intron-Distal3.795693.55315K562SAFB
chr7153103681153103712-intron-Distal3.256393.31558K562KHDRBS1
chr7153102533153102559-intron-Distal,intron-Proximal5.206366.04760K562AQR
chr7153105307153105348-intron-Distal3.9470810.38127K562KHDRBS1
chr7153097128153097192-intron-Distal3.327808.65339K562YBX3
chr7153104765153104792-intron-Distal6.0929420.26152K562HNRNPL
chr7153105660153105714-intron-Distal4.177175.02089K562SAFB
chr7153104840153104860-intron-Distal3.6873712.27127K562HNRNPL
chr7153100963153101033-intron-Distal4.778705.91381K562LIN28B
chr7153097750153097819-intron-Distal4.544925.25919K562TAF15
chr7153104818153104840-intron-Distal3.6842111.83271K562HNRNPL
chr7153105166153105193-intron-Distal4.9341111.21548K562KHDRBS1
chr7153106090153106149-intron-Distal3.869354.24122K562HNRNPU
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC073236.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC073236.3 is not available on ENCORE database.

  • 70 RBPs can affect the levels of AC073236.3.  








The Knockdown/knockout RNA-Seq assay for AC073236.3 is not available on ENCORE database.





70 RBPs can affect the gene expression of AC073236.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC073236.3ENSG00000234722.31247.526801552.77510-0.315802.442101.33940K562AARS
AC073236.3ENSG00000234722.31108.124702868.39180-1.3721017.8922016.57010K562AGGF1
AC073236.3ENSG00000234722.31792.521303151.57720-0.8141010.128407.93980K562AKAP8
AC073236.3ENSG00000234722.31134.301102984.60510-1.3957017.4890015.57800K562AKAP8L
AC073236.3ENSG00000234722.31051.880901996.00300-0.9241015.3748014.14420K562AQR
AC073236.3ENSG00000234722.31811.436103131.40570-0.789707.449505.84110K562ATP5C1
AC073236.3ENSG00000234722.32120.030301327.079100.675705.787504.11660K562CCAR1
AC073236.3ENSG00000234722.3837.106501230.28040-0.555507.377105.52680K562CSTF2
AC073236.3ENSG00000234722.32367.510803365.40200-0.507405.628103.48480K562DDX19B
AC073236.3ENSG00000234722.31082.858701421.86330-0.392905.437403.57890K562DDX27
AC073236.3ENSG00000234722.32109.576301485.778300.505605.081703.17220K562DHX30
AC073236.3ENSG00000234722.31628.970403212.19160-0.9796012.4916010.33450K562DKC1
AC073236.3ENSG00000234722.31938.968701427.012500.442204.063802.41240K562DNAJC21
AC073236.3ENSG00000234722.31029.474301398.10540-0.441603.898702.80100K562EFTUD2
AC073236.3ENSG00000234722.31423.636201025.802500.472707.210105.20800K562EIF2S1
AC073236.3ENSG00000234722.33580.180902020.558500.8252026.4819024.64440K562EIF2S2
AC073236.3ENSG00000234722.32265.441301349.822400.746903.287002.18260K562EIF3A
AC073236.3ENSG00000234722.31506.699701241.061500.279702.715401.92560K562EIF3G
AC073236.3ENSG00000234722.33934.612702980.039400.400805.046703.79500K562EIF4G2
AC073236.3ENSG00000234722.3645.87910851.70620-0.399103.144401.75240K562EWSR1
AC073236.3ENSG00000234722.31557.343602092.83940-0.426404.343803.26520K562FIP1L1
AC073236.3ENSG00000234722.31491.020501014.733600.555106.506305.63410K562FXR1
AC073236.3ENSG00000234722.3588.15240778.10910-0.403802.066101.46730K562G3BP2
AC073236.3ENSG00000234722.32441.935302019.901000.273602.985701.80110K562GLRX3
AC073236.3ENSG00000234722.3863.033101574.38800-0.867304.561702.86920K562HNRNPA2B1
AC073236.3ENSG00000234722.33659.007501698.803201.1068031.6337029.68960K562HNRNPC
AC073236.3ENSG00000234722.31857.756001517.141200.292102.470501.40280K562HNRNPF
AC073236.3ENSG00000234722.3638.465101076.39120-0.753508.255106.05620K562HNRNPK
AC073236.3ENSG00000234722.33800.526002641.074100.525008.010006.12320K562HNRNPL
AC073236.3ENSG00000234722.32297.749401721.386100.416603.290702.26890K562HNRNPM
AC073236.3ENSG00000234722.3630.937801895.00330-1.5866043.5923040.51980K562HNRNPU
AC073236.3ENSG00000234722.33902.173102837.451700.459605.337004.24980K562HSPD1
AC073236.3ENSG00000234722.32183.685401386.596200.655104.141302.31690K562ILF3
AC073236.3ENSG00000234722.31306.906803167.71530-1.2773014.2523011.88640K562KIF1C
AC073236.3ENSG00000234722.31363.685901876.82040-0.460802.989802.01480K562KRR1
AC073236.3ENSG00000234722.31037.353201645.39320-0.665508.927606.36430K562LARP7
AC073236.3ENSG00000234722.31526.682003032.03700-0.989907.672705.53800K562MAK16
AC073236.3ENSG00000234722.32216.099201130.380100.9711022.1647019.57170K562MATR3
AC073236.3ENSG00000234722.31863.937903548.59900-0.928909.710507.80890K562MBNL1
AC073236.3ENSG00000234722.32719.130002123.638100.356505.564204.44200K562MTPAP
AC073236.3ENSG00000234722.3903.923902487.28420-1.4603020.5404017.49250K562NAA15
AC073236.3ENSG00000234722.3700.63640974.40140-0.475904.950103.30210K562NCBP2
AC073236.3ENSG00000234722.3688.480801376.89510-0.999905.260403.77310K562PABPN1
AC073236.3ENSG00000234722.3794.142101007.79400-0.343702.443201.52730K562PCBP2
AC073236.3ENSG00000234722.35797.519102438.247501.2495027.9046025.48770K562PCBP3
AC073236.3ENSG00000234722.34111.826001870.152001.1365037.7301035.18240K562POLR2G
AC073236.3ENSG00000234722.3733.617101360.51870-0.8911012.4386010.83870K562PRPF8
AC073236.3ENSG00000234722.31934.676801100.509700.8138013.1891011.79260K562PTBP1
AC073236.3ENSG00000234722.34470.503003458.143800.370305.882204.27190K562PUM1
AC073236.3ENSG00000234722.35102.875203388.633900.5905016.1594013.90190K562PUM2
AC073236.3ENSG00000234722.3746.181402960.52860-1.9883033.0666031.16580K562PUS1
AC073236.3ENSG00000234722.3486.52970742.42690-0.609703.040301.54700K562RAVER1
AC073236.3ENSG00000234722.3985.206002884.07590-1.5496025.1378023.27190K562RBM15
AC073236.3ENSG00000234722.3368.05730738.12120-1.0039013.9114010.79340K562RBM25
AC073236.3ENSG00000234722.31404.346601110.404900.338702.455901.43670K562NELFE
AC073236.3ENSG00000234722.3505.32410809.17340-0.679208.496206.95560K562SF3B4
AC073236.3ENSG00000234722.3846.205201446.17900-0.773203.738802.23060K562SNRNP200
AC073236.3ENSG00000234722.32009.450002385.28070-0.247403.101502.11610K562SRPK2
AC073236.3ENSG00000234722.31619.809301078.887700.586208.034406.83740K562SRSF1
AC073236.3ENSG00000234722.31320.738301006.906900.391303.289602.12610K562SRSF4
AC073236.3ENSG00000234722.31841.051002298.19350-0.320004.525603.00910K562SRSF7
AC073236.3ENSG00000234722.3975.928001317.21620-0.432603.108502.03120K562SUPV3L1
AC073236.3ENSG00000234722.31853.801301091.858900.7636010.779509.22730K562TARDBP
AC073236.3ENSG00000234722.3339.77710754.32690-1.1506013.5291010.93280K562U2AF1
AC073236.3ENSG00000234722.3549.61530779.02730-0.503304.922703.85250K562U2AF2
AC073236.3ENSG00000234722.31931.945701394.141100.470604.483803.15860K562UCHL5
AC073236.3ENSG00000234722.34325.009502502.018100.7895015.0532013.53370K562UPF1
AC073236.3ENSG00000234722.31456.314703001.04110-1.043107.682605.25620K562UTP18
AC073236.3ENSG00000234722.32799.103902226.182200.330306.119604.91290K562WDR43
AC073236.3ENSG00000234722.31836.243301419.672700.371102.935001.68000K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC073236.3 is not available on ENCORE database.





24 RBPs can affect the splicing of AC073236.3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153109175153109319-0.261000.000610.09927excludedK562FTO
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153109175153109319-0.217000.000180.05220excludedK562PUM1
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153109175153109319-0.284000.000010.00368excludedK562FMR1
SEAC073236.3ENSG00000234722.3chr7-153104040153104167153102576153102683153110697153111021-0.081000.000230.04294excludedK562DROSHA
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153109175153109319-0.257000.000310.06535excludedK562GPKOW
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102577153102778153110697153111021-0.389000.000400.07272excludedK562APOBEC3C
SEAC073236.3ENSG00000234722.3chr7-1531040401531041691531025761531026831531106971531110210.166000.000000.00000includedK562HNRNPL
SEAC073236.3ENSG00000234722.3chr7-1531011411531013181530970041530976311531025761531026830.177000.000000.00000includedK562HNRNPL
SEAC073236.3ENSG00000234722.3chr7-153100447153100577153097004153097631153101141153101318-0.095000.000470.03675excludedK562HNRNPL
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153109175153109319-0.239000.000060.01739excludedK562EIF4G2
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153110697153111021-0.057000.000120.02557excludedK562RBM22
SEAC073236.3ENSG00000234722.3chr7-1531086701531088091531025771531026831531091751531093190.266000.000660.02704includedK562TARDBP
SEAC073236.3ENSG00000234722.3chr7-153104040153104169153102576153102683153109175153109319-0.243000.000250.03467excludedK562CPSF6
SEAC073236.3ENSG00000234722.3chr7-153102576153102778153097004153097631153110697153111021-0.107000.000000.00007excludedK562HNRNPK
SEAC073236.3ENSG00000234722.3chr7-153104040153104167153102576153102683153110697153111021-0.082000.000280.05376excludedK562NPM1
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.104000.000010.00136shorterK562AGGF1
A3SSAC073236.3ENSG00000234722.3chr7-1531025761531027781531025761531026831531040401531041690.322000.000210.04198longerK562RBM22
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.095000.000020.00317shorterK562AKAP8L
A3SSAC073236.3ENSG00000234722.3chr7-1531025771531027781531025771531026831531106971531110210.233000.000000.00000longerK562U2AF2
A3SSAC073236.3ENSG00000234722.3chr7-153102576153102778153102576153102683153109175153109319-0.221000.000060.05838shorterK562PUM1
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.119000.000010.00751shorterK562HNRNPUL1
A3SSAC073236.3ENSG00000234722.3chr7-1531025771531027781531025771531026831531106971531110210.096000.000010.01029longerK562SBDS
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.170000.000000.00000shorterK562PUS1
A3SSAC073236.3ENSG00000234722.3chr7-153102576153102778153102576153102683153104040153104169-0.376000.000000.00000shorterK562HNRNPL
A3SSAC073236.3ENSG00000234722.3chr7-1531025761531027781531025761531026831531040401531041690.279000.000030.03156longerK562FMR1
A3SSAC073236.3ENSG00000234722.3chr7-1531025771531027781531025771531026831531106971531110210.131000.000080.00537longerK562U2AF1
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.144000.000000.00000shorterK562RBM15
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.082000.000050.05131shorterK562IGF2BP2
A3SSAC073236.3ENSG00000234722.3chr7-153102577153102778153102577153102683153110697153111021-0.098000.000000.00000shorterK562SRSF1
A3SSAC073236.3ENSG00000234722.3chr7-1531025771531027781531025771531026831531106971531110210.079000.000440.05429longerK562HNRNPC
A3SSAC073236.3ENSG00000234722.3chr7-1531025761531027781531025761531026831531040401531041690.296000.000060.05554longerK562FTO
MXEAC073236.3ENSG00000234722.3chr7-1530980451530981401531011411531013181530970041530976311531025761531026830.459000.000720.014631includedK562DROSHA
MXEAC073236.3ENSG00000234722.3chr7-1531040401531041691531086701531088091531025761531026831531091751531093190.412000.000000.000021includedK562TARDBP
MXEAC073236.3ENSG00000234722.3chr7-1531040401531041691531086701531088091531025761531026831531106971531110210.296000.000090.004211includedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC073236.3 is not avaliable on ENCORE database.