C8B

General Information

Gene Name       : C8B
Gene ID             : ENSG00000021852.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C8B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C8BENSG00000021852.120.000.000.00ENCSR000AEF
HepG2C8BENSG00000021852.128.309.678.98ENCSR985KAT
K562C8BENSG00000021852.120.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C8B is not avaliable on ENCORE database.



Proteins bound to RNA
  • C8B RNA is bound by 2 proteins.  







eCLIP assay for C8B is not avaliable on ENCORE database.





2 proteins are bound to C8B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr15740654557406626-CDS,intron-Distal3.270903.19472HepG2SND1
chr15740699957407150-intron-Distal5.386449.85976HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C8B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C8B is not available on ENCORE database.

  • 115 RBPs can affect the levels of C8B.  








The Knockdown/knockout RNA-Seq assay for C8B is not available on ENCORE database.





115 RBPs can affect the gene expression of C8B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C8BENSG00000021852.8234.84100332.91730-0.503502.589101.54840HepG2AATF
C8BENSG00000021852.8428.56750233.030400.878905.481004.20540HepG2ABCF1
C8BENSG00000021852.897.72820250.44270-1.3576013.2132012.09120HepG2ACO1
C8BENSG00000021852.8500.75540230.228901.1209012.1558010.27890HepG2ADAR
C8BENSG00000021852.8106.37850707.39970-2.7333047.4782045.68360HepG2AKAP1
C8BENSG00000021852.8317.75580210.147800.596402.774501.36520HepG2ATP5C1
C8BENSG00000021852.8549.68790179.385301.6155019.1685017.14750HepG2BCLAF1
C8BENSG00000021852.8399.79450174.514201.195808.526006.48350HepG2BUD13
C8BENSG00000021852.81656.80990556.090601.5749034.9370032.67920HepG2CIRBP
C8BENSG00000021852.8180.23320250.34600-0.474102.536101.89400HepG2CKAP4
C8BENSG00000021852.836.99730329.15570-3.1533032.1570029.69780HepG2CNOT7
C8BENSG00000021852.8340.5951085.617201.9920022.0698020.36660HepG2CPSF6
C8BENSG00000021852.8406.93800191.808001.085009.691007.76650HepG2CPSF7
C8BENSG00000021852.8328.43370236.099300.476102.857501.82250HepG2YBX3
C8BENSG00000021852.8193.38600340.88480-0.817804.601402.69800HepG2CSTF2T
C8BENSG00000021852.8194.37770386.55850-0.9918010.451309.35770HepG2CELF1
C8BENSG00000021852.8333.53540231.604200.526103.957102.98140HepG2DDX19B
C8BENSG00000021852.8551.28550367.270600.585904.446003.60710HepG2DDX21
C8BENSG00000021852.8357.59980189.920200.912904.673403.05760HepG2DDX27
C8BENSG00000021852.8465.20270677.64260-0.542703.649302.94070HepG2DDX3X
C8BENSG00000021852.8553.50050214.478901.3676017.9077015.68770HepG2DDX5
C8BENSG00000021852.8418.29850223.597400.903508.206806.61300HepG2DHX30
C8BENSG00000021852.8585.77300239.594901.2896021.7470020.27630HepG2DKC1
C8BENSG00000021852.8160.84750231.82500-0.527302.579301.89580HepG2DNAJC21
C8BENSG00000021852.8696.57200298.712801.2214014.6545012.79550HepG2EEF2
C8BENSG00000021852.8150.35490242.50030-0.689603.200202.23390HepG2EIF3D
C8BENSG00000021852.8702.21340346.848901.0175014.4145012.34560HepG2EIF3G
C8BENSG00000021852.81024.89200618.427400.728706.675105.68060HepG2EIF4A3
C8BENSG00000021852.8222.60080602.11050-1.4356013.7784012.30900HepG2EIF4B
C8BENSG00000021852.81084.33600392.812201.4648028.5538026.22480HepG2EIF4G2
C8BENSG00000021852.8311.78530201.800900.627503.021201.88420HepG2ESF1
C8BENSG00000021852.8681.06230266.872001.3515025.8748024.35250HepG2ETF1
C8BENSG00000021852.890.15380235.28450-1.383908.621507.35080HepG2FIP1L1
C8BENSG00000021852.8249.8776085.778701.542406.203504.68520HepG2FTO
C8BENSG00000021852.8270.72690429.55220-0.666004.936103.89960HepG2FUBP3
C8BENSG00000021852.8246.42630394.98370-0.680603.594602.32350HepG2FUS
C8BENSG00000021852.8219.22420623.94300-1.5090020.1095018.42140HepG2FXR1
C8BENSG00000021852.8235.47150578.81140-1.2975014.7548013.27760HepG2G3BP1
C8BENSG00000021852.8590.00740305.136700.951209.253707.35700HepG2GNB2L1
C8BENSG00000021852.8412.3691097.034302.0873024.0784022.39590HepG2GPKOW
C8BENSG00000021852.893.13910304.68440-1.7099013.7953011.37690HepG2GRSF1
C8BENSG00000021852.8145.37080234.04610-0.687103.135302.45380HepG2HNRNPA1
C8BENSG00000021852.8620.32170381.992000.699408.467206.99960HepG2HNRNPA2B1
C8BENSG00000021852.8390.78380260.336300.585903.419502.65470HepG2HNRNPC
C8BENSG00000021852.8482.15370285.106800.757904.932702.91630HepG2HNRNPD
C8BENSG00000021852.8277.47730124.649601.1544010.888609.59020HepG2HNRNPF
C8BENSG00000021852.81052.23040586.069100.8442010.448909.16930HepG2HNRNPK
C8BENSG00000021852.8343.4824092.603401.8910013.8053012.54530HepG2HNRNPLL
C8BENSG00000021852.899.01290162.28000-0.712803.132702.12400HepG2HNRNPM
C8BENSG00000021852.8190.11090258.61480-0.444002.332201.77170HepG2HNRNPU
C8BENSG00000021852.8417.53910122.744401.7662026.3174024.36640HepG2IGF2BP1
C8BENSG00000021852.8108.39290552.12620-2.3487015.9926013.89920HepG2IGF2BP3
C8BENSG00000021852.8635.14130313.542201.018309.441207.08570HepG2KHDRBS1
C8BENSG00000021852.8352.51220591.77480-0.747404.844903.48390HepG2KHSRP
C8BENSG00000021852.8306.56250228.909800.421302.504301.53230HepG2KIF1C
C8BENSG00000021852.8648.31840353.581300.874607.046505.70900HepG2LARP4
C8BENSG00000021852.8155.66870298.86690-0.941006.075504.41610HepG2LARP7
C8BENSG00000021852.8418.37150624.16070-0.577103.915603.13640HepG2MAGOH
C8BENSG00000021852.8253.56300627.65800-1.3076014.3134012.95850HepG2MATR3
C8BENSG00000021852.879.68130253.80700-1.671409.334707.52790HepG2METAP2
C8BENSG00000021852.8385.9772094.485902.0302013.6908011.53340HepG2MTPAP
C8BENSG00000021852.8308.53500412.15750-0.417802.585901.84910HepG2NOL12
C8BENSG00000021852.8377.6475082.124702.2011021.9659020.14240HepG2NSUN2
C8BENSG00000021852.8755.05990572.154900.400102.418601.74000HepG2PABPC4
C8BENSG00000021852.8134.22340255.98030-0.931407.000005.75080HepG2PARN
C8BENSG00000021852.8436.89570608.52970-0.478004.646203.89380HepG2PCBP1
C8BENSG00000021852.8647.20270373.928900.791405.316403.90880HepG2PCBP2
C8BENSG00000021852.8436.32770286.898300.604803.541201.64240HepG2PHF6
C8BENSG00000021852.8325.76670230.663200.498003.104402.32740HepG2PPIL4
C8BENSG00000021852.8211.21000131.766400.680603.857202.95690HepG2PRPF4
C8BENSG00000021852.8439.86920156.588201.4900015.2490013.57510HepG2PRPF8
C8BENSG00000021852.875.38770619.18690-3.0380081.9626079.97370HepG2PTBP1
C8BENSG00000021852.8281.65080393.43910-0.482202.780802.18290HepG2PUF60
C8BENSG00000021852.8201.29820417.65140-1.0530013.7205012.61140HepG2PUM1
C8BENSG00000021852.8192.83430417.34730-1.1139011.8814010.54740HepG2PUM2
C8BENSG00000021852.8417.60150255.085900.711007.045606.14030HepG2PUS1
C8BENSG00000021852.8332.47870670.62620-1.0122014.5093013.23590HepG2QKI
C8BENSG00000021852.8106.39460360.90650-1.7622012.2753010.87530HepG2RAVER1
C8BENSG00000021852.819.50830223.05610-3.5152036.3139034.85480HepG2RBM22
C8BENSG00000021852.8356.70390608.62450-0.770808.067306.96820HepG2RBM25
C8BENSG00000021852.8160.30480360.37150-1.168709.038507.23180HepG2RBM27
C8BENSG00000021852.8699.16090359.699000.958707.284203.99900HepG2RBM34
C8BENSG00000021852.8174.71470317.87720-0.863504.831502.82420HepG2RBM47
C8BENSG00000021852.8833.75670641.788100.377403.506702.82230HepG2RECQL
C8BENSG00000021852.8451.47970134.275201.7494023.4398021.85670HepG2RPLP0
C8BENSG00000021852.886.20980235.95260-1.4526011.4780010.33230HepG2RPS19
C8BENSG00000021852.8541.04510330.429300.711304.447603.43360HepG2RPS3A
C8BENSG00000021852.8226.91230339.26410-0.580302.753801.68230HepG2RPS5
C8BENSG00000021852.892.39690154.89920-0.745402.424401.68390HepG2RRP9
C8BENSG00000021852.8160.64990230.30600-0.519602.634202.00320HepG2SAFB2
C8BENSG00000021852.8371.4402091.647802.0189024.0807022.24210HepG2SF3B1
C8BENSG00000021852.8498.89630644.68000-0.369802.971902.36310HepG2SF3B4
C8BENSG00000021852.8512.31990377.243500.441403.774702.97530HepG2SLBP
C8BENSG00000021852.8831.29000352.025701.239607.156304.76620HepG2SLTM
C8BENSG00000021852.8112.53600268.57250-1.2549012.4132011.20360HepG2SMN1
C8BENSG00000021852.8345.38820101.978301.759903.751202.83560HepG2SNRNP70
C8BENSG00000021852.8340.19160672.89560-0.9840015.7545014.82380HepG2SRSF1
C8BENSG00000021852.8247.97140122.463401.017708.075706.98930HepG2SRSF7
C8BENSG00000021852.8672.60420218.740001.6204038.0869036.69700HepG2SSB
C8BENSG00000021852.8559.71620337.260400.730703.994702.53450HepG2SUB1
C8BENSG00000021852.8189.03520441.78980-1.2247017.0757015.74080HepG2SUCLG1
C8BENSG00000021852.8229.82710386.12760-0.748504.219502.57600HepG2SUGP2
C8BENSG00000021852.8438.87540158.798801.4665018.2726016.09050HepG2SUPT6H
C8BENSG00000021852.8361.46690202.059500.839004.917704.05600HepG2SUPV3L1
C8BENSG00000021852.82146.81240604.794701.8276067.3540065.04210HepG2TAF15
C8BENSG00000021852.8251.1467090.311101.4755011.201809.89230HepG2TARDBP
C8BENSG00000021852.897.91770201.21980-1.039105.298704.44490HepG2U2AF1
C8BENSG00000021852.860.62780119.36500-0.977303.595802.73280HepG2UCHL5
C8BENSG00000021852.8372.65860216.480000.783505.952204.98990HepG2UPF1
C8BENSG00000021852.8128.19400209.00650-0.705202.512901.93650HepG2UTP3
C8BENSG00000021852.8159.93370354.79990-1.149507.112305.12910HepG2XRCC5
C8BENSG00000021852.8125.62420396.84690-1.6595014.7800012.54690HepG2XRCC6
C8BENSG00000021852.8395.06560198.905300.989907.129705.97640HepG2XRN2
C8BENSG00000021852.8289.92220130.028801.1567011.3611010.15700HepG2ZC3H8
C8BENSG00000021852.8350.50880238.089800.557803.570602.97080HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C8B is not available on ENCORE database.





6 RBPs can affect the splicing of C8B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC8BENSG00000021852.8chr1-5742520157425330574225275742258357425692574258490.058000.002120.09767includedHepG2NCBP2
SEC8BENSG00000021852.8chr1-574114935741173457409368574094975741522757415425-0.228000.000770.04152excludedHepG2PTBP1
SEC8BENSG00000021852.8chr1-5742520157425330574225275742258357425692574258490.104000.000030.00253includedHepG2MATR3
SEC8BENSG00000021852.8chr1-5742520157425330574225275742258357425692574258490.081000.000100.01357includedHepG2DDX6
SEC8BENSG00000021852.8chr1-5742520157425330574225275742258357425692574258490.160000.000800.05620includedHepG2HNRNPL
SEC8BENSG00000021852.8chr1-5742944457429666574257355742584957431529574318130.181000.000000.00000includedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C8B is not avaliable on ENCORE database.