STIM1

General Information

Gene Name       : STIM1
Gene ID             : ENSG00000167323.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STIM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STIM1ENSG00000167323.1118.3625.2021.78ENCSR000AEF
HepG2STIM1ENSG00000167323.1140.9621.0030.98ENCSR985KAT
K562STIM1ENSG00000167323.1128.0526.2727.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STIM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STIM1 RNA is bound by 38 proteins.  







eCLIP assay for STIM1 is not avaliable on ENCORE database.





38 proteins are bound to STIM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1141142344114285+3'-UTR3.676973.92010K562DDX55
chr1141135344113636+3'-UTR3.069056.34376K562UPF1
chr1141130704113097+3'-UTR5.9688918.61007K562LIN28B
chr1141131154113165+3'-UTR7.12016105.21024HepG2LIN28B
chr1141142894114348+3'-UTR4.252715.01757K562IGF2BP2
chr1141142374114279+3'-UTR3.347744.08867HepG2LARP4
chr1141130974113105+3'-UTR6.2996122.28586K562LIN28B
chr1141140684114120+3'-UTR3.906325.10007K562FAM120A
chr1141131654113179+3'-UTR3.305675.95143HepG2LIN28B
chr1141133834113465+3'-UTR3.720705.47443HepG2PCBP2
chr1139887803988909+3'-UTR,5'-UTR,CDS,intron-Proximal3.777573.02919K562GRWD1
chr1141131054113109+3'-UTR8.2885590.39539K562LIN28B
chr1141125174112583+3'-UTR,CDS4.470845.64683K562YBX3
chr1141137534113787+3'-UTR3.340698.98498K562YBX3
chr1141130834113115+3'-UTR6.9719260.76612HepG2LIN28B
chr1141140644114105+3'-UTR3.871415.61622K562UPF1
chr1141131204113196+3'-UTR5.3385117.76940K562PUM2
chr1141142784114352+3'-UTR4.7585112.37169K562PABPC4
chr1141137394113753+3'-UTR3.207153.26789K562YBX3
chr1141131164113130+3'-UTR9.00025153.79991K562LIN28B
chr1141138204113855+3'-UTR3.786454.87320K562UPF1
chr1141131094113116+3'-UTR8.4483798.92088K562LIN28B
chr1141131304113183+3'-UTR8.09457163.93991K562LIN28B
chr1141140464114133+3'-UTR4.776736.91022K562IGF2BP1
chr1141136424113712+3'-UTR3.306507.32623K562UPF1
chr1141142884114342+3'-UTR3.475854.91593K562FAM120A
chr1138773343877396+5'-UTR,intron-Distal4.734314.48994K562RBM15
chr1138773373877405+5'-UTR,intron-Distal3.322265.14160K562FTO
chr1138773963877476+5'-UTR,intron-Distal3.067003.49427K562RBM15
chr1138773033877366+5'-UTR,intron-Distal4.508177.12922K562DGCR8
chr1138771923877266+5'-UTR,intron-Distal6.1645532.19067HepG2DDX3X
chr1138773333877407+5'-UTR,intron-Distal5.3272559.39729HepG2DDX3X
chr1138772803877316+5'-UTR,intron-Distal5.8709617.56893HepG2DDX3X
chr1138768973877046+5'-UTR,intron-Distal5.1264677.66730HepG2DDX3X
chr1138774213877461+5'-UTR,intron-Distal5.5425020.18554HepG2DDX3X
chr1138769083876962+5'-UTR,intron-Distal4.507165.07098K562DDX3X
chr1138771423877192+5'-UTR,intron-Distal3.9485624.98439HepG2DDX3X
chr1140804564080542+5'-UTR,CDS,intron-Proximal5.550938.42776K562SF3B4
chr1141077064107776+CDS,intron-Proximal4.162027.24138K562FXR2
chr1140767594076829+CDS3.756604.51739HepG2BCLAF1
chr1139888673988920+CDS,intron-Proximal3.627124.41267HepG2PPIG
chr1141045964104664+CDS3.375163.37427K562FMR1
chr1141046324104726+CDS3.881085.37099K562FXR2
chr1140768654076958+CDS,intron-Proximal4.916114.13847K562AQR
chr1141046674104726+CDS4.794725.96254K562FMR1
chr1141076904107764+CDS,intron-Proximal3.158643.01994K562BUD13
chr1138775163877539+CDS,intron-Distal4.0707910.46094HepG2DDX3X
chr1140451214045202+CDS4.290533.02572K562SND1
chr1140805614080662+CDS,intron-Proximal3.788004.83899HepG2PRPF8
chr1141076944107781+CDS,intron-Proximal3.685133.95921HepG2U2AF2
chr1138871403887202+intron-Distal4.058033.86809HepG2SUGP2
chr1139333853933448+intron-Distal5.171425.14122HepG2PCBP2
chr1138928743892984+intron-Distal4.267293.47525K562MATR3
chr1140072004007286+intron-Distal4.846535.05386K562PTBP1
chr1138876693887737+intron-Distal4.043724.04854HepG2HNRNPC
chr1141123474112488+intron-Distal,intron-Proximal3.715677.71013HepG2PCBP2
chr1138970093897094+intron-Distal3.568213.08967K562KHDRBS1
chr1141039424104007+intron-Distal4.063605.75812K562PTBP1
chr1139335253933566+intron-Distal5.5139010.65318HepG2PCBP2
chr1138874543887557+intron-Distal3.983296.90077HepG2PTBP1
chr1140013334001405+intron-Distal4.885975.89032HepG2QKI
chr1141117384111830+intron-Distal3.392574.08528HepG2SUGP2
chr1141124104112466+intron-Distal,intron-Proximal5.331967.34317K562PTBP1
chr1139175753917625+intron-Distal3.904406.24904HepG2PTBP1
chr1139174993917559+intron-Distal5.554059.44534K562PTBP1
chr1139165393916602+intron-Distal4.245155.03657K562PTBP1
chr1140012004001263+intron-Distal5.069717.43163HepG2QKI
chr1141063354106447+intron-Distal5.154846.97910HepG2PCBP2
chr1139175753917640+intron-Distal5.1386519.60653K562PTBP1
chr1141121854112312+intron-Distal4.1501814.08473HepG2PTBP1
chr1141123234112393+intron-Distal4.173407.55717HepG2PTBP1
chr1140071994007306+intron-Distal4.248373.09122HepG2PTBP1
chr1139334303933568+intron-Distal4.862668.57937HepG2DDX59
chr1139238333923888+intron-Distal4.315503.18269HepG2XPO5
chr1141060614106175+intron-Distal,intron-Proximal5.9456811.38012HepG2QKI
chr1139334233933529+intron-Distal4.439994.33022HepG2HNRNPK
chr1139498303949905+intron-Distal3.926443.34609K562TARDBP
chr1138874763887572+intron-Distal3.843323.97268K562PTBP1
chr1140013134001392+intron-Distal5.299186.85401K562QKI
chr1141123114112369+intron-Distal5.243305.89856K562PTBP1
chr1140943854094482+intron-Distal3.461843.27944K562PTBP1
chr1139166863916761+intron-Distal4.8392810.97098K562PTBP1
chr1139333203933385+intron-Distal5.116775.96444HepG2PCBP2
chr1139286183928708+intron-Distal4.002325.42334HepG2QKI
chr1139412593941305+intron-Distal4.583895.38422HepG2ILF3
chr1141081214108168+intron-Distal3.573033.97268K562PTBP1
chr1139255713925646+intron-Distal4.050573.88340K562TARDBP
chr1139334703933525+intron-Distal5.1248712.97823HepG2PCBP2
chr1141060814106167+intron-Distal,intron-Proximal5.449615.61339K562QKI
chr1139333473933423+intron-Distal3.158283.37567HepG2HNRNPK
chr1141039404104047+intron-Distal,intron-Proximal4.714826.42900HepG2PTBP1
chr1141063304106415+intron-Distal3.874825.16181K562PTBP1
chr1139174893917545+intron-Distal4.029843.74583HepG2PTBP1
chr1141121734112310+intron-Distal6.2597627.34385K562PTBP1
chr1141084004108486+intron-Distal3.148713.35103HepG2QKI
chr1139012363901323+intron-Distal4.061753.78162K562HNRNPM
chr1141121924112298+intron-Distal3.659424.49882K562MATR3
chr1139334763933572+intron-Distal5.044598.24882K562ILF3
chr1139012493901327+intron-Distal4.495654.12480HepG2HNRNPM
chr1141036314103678+intron-Proximal4.232123.42734K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STIM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STIM1 is not available on ENCORE database.

  • 100 RBPs can affect the levels of STIM1.  








The Knockdown/knockout RNA-Seq assay for STIM1 is not available on ENCORE database.





100 RBPs can affect the gene expression of STIM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STIM1ENSG00000167323.5793.705201012.42780-0.351102.342701.42310HepG2ADAR
STIM1ENSG00000167323.51657.457203063.45030-0.8862011.5896010.57400HepG2AKAP1
STIM1ENSG00000167323.51767.373202534.75330-0.520205.207104.14690HepG2ASCC1
STIM1ENSG00000167323.52132.859601717.251700.312604.495803.65710HepG2AUH
STIM1ENSG00000167323.51272.08630865.860600.554904.018002.95210HepG2BCLAF1
STIM1ENSG00000167323.51649.24230883.094300.9011015.0225013.78370HepG2BOP1
STIM1ENSG00000167323.51631.952301217.106400.423003.801902.36760HepG2BUD13
STIM1ENSG00000167323.51627.483101173.341100.471905.950804.87770HepG2CALR
STIM1ENSG00000167323.51216.001101737.88620-0.515203.649402.51470HepG2CCAR1
STIM1ENSG00000167323.51922.009102408.18840-0.325302.438901.70860HepG2CIRBP
STIM1ENSG00000167323.51175.30560810.717600.535704.948904.05250HepG2CPSF6
STIM1ENSG00000167323.51961.199601337.750400.551806.831205.16810HepG2CPSF7
STIM1ENSG00000167323.51939.595601453.544000.416106.974806.04220HepG2CELF1
STIM1ENSG00000167323.51925.162101562.626600.300903.025402.25560HepG2DAZAP1
STIM1ENSG00000167323.51490.470201100.953300.436904.257003.43360HepG2DDX21
STIM1ENSG00000167323.52953.128701728.431100.7727013.1961010.74360HepG2DDX47
STIM1ENSG00000167323.51771.991801394.940600.345102.767401.75540HepG2DDX5
STIM1ENSG00000167323.53381.527502520.824800.423703.308602.63980HepG2DDX6
STIM1ENSG00000167323.51403.21620983.268500.513005.569004.20630HepG2DHX30
STIM1ENSG00000167323.51738.751201019.453000.7702017.5777015.95450HepG2DNAJC21
STIM1ENSG00000167323.51784.545001541.877000.210802.474701.67490HepG2EIF4G1
STIM1ENSG00000167323.52050.717701476.974600.473405.235404.13380HepG2EIF4G2
STIM1ENSG00000167323.51622.285002702.05870-0.736009.807108.57730HepG2FXR1
STIM1ENSG00000167323.51854.060402506.57670-0.435003.516602.77090HepG2G3BP1
STIM1ENSG00000167323.52164.944302661.02500-0.297702.127601.35290HepG2G3BP2
STIM1ENSG00000167323.51480.38250918.981400.687806.920905.93820HepG2GPKOW
STIM1ENSG00000167323.5881.559601308.28180-0.569503.627702.35010HepG2GRSF1
STIM1ENSG00000167323.51604.271401255.163600.353903.546302.44980HepG2HDGF
STIM1ENSG00000167323.51464.234801081.157600.437506.439005.40780HepG2HNRNPF
STIM1ENSG00000167323.51335.667002538.08690-0.9262016.7772015.20650HepG2HNRNPK
STIM1ENSG00000167323.51142.703301423.34530-0.316802.751802.07980HepG2HNRNPL
STIM1ENSG00000167323.51748.50850877.003600.995407.489806.51220HepG2HNRNPLL
STIM1ENSG00000167323.5701.307601131.77660-0.690509.096407.54150HepG2HNRNPM
STIM1ENSG00000167323.5973.745801137.25700-0.223902.020701.49250HepG2HNRNPU
STIM1ENSG00000167323.51672.734801064.627800.651809.615608.34220HepG2IGF2BP1
STIM1ENSG00000167323.52064.370302547.88790-0.303602.110001.51160HepG2IGF2BP2
STIM1ENSG00000167323.51246.624002391.05270-0.939603.973002.79550HepG2IGF2BP3
STIM1ENSG00000167323.51441.206301161.668700.311004.267303.37590HepG2ILF2
STIM1ENSG00000167323.51967.829202562.72580-0.381102.317601.41240HepG2KHSRP
STIM1ENSG00000167323.51508.385401201.790000.327703.336602.21810HepG2KIF1C
STIM1ENSG00000167323.51538.721802133.95280-0.471803.022001.71700HepG2KRR1
STIM1ENSG00000167323.52043.312502703.00180-0.403703.230102.52170HepG2MAGOH
STIM1ENSG00000167323.51377.843702718.13670-0.9802014.2572012.90520HepG2MATR3
STIM1ENSG00000167323.51976.714102782.16930-0.493104.525103.72490HepG2NCBP2
STIM1ENSG00000167323.51191.110401549.51290-0.379503.954403.04210HepG2NOL12
STIM1ENSG00000167323.51017.89790777.653400.388302.817702.06180HepG2NSUN2
STIM1ENSG00000167323.53178.169801291.838401.2987013.7176011.70210HepG2PABPC1
STIM1ENSG00000167323.5811.660901125.67760-0.471806.489805.27600HepG2PARN
STIM1ENSG00000167323.51691.495102507.30230-0.567809.894108.86060HepG2PCBP1
STIM1ENSG00000167323.51194.858701014.340700.236201.952401.32490HepG2PPIL4
STIM1ENSG00000167323.5781.291001144.53690-0.550808.687107.42180HepG2PRPF4
STIM1ENSG00000167323.51807.806602551.15210-0.496908.987508.11460HepG2PTBP1
STIM1ENSG00000167323.51846.675201479.226000.320003.111602.48540HepG2PUF60
STIM1ENSG00000167323.51988.309801339.255800.570005.981805.13800HepG2PUS1
STIM1ENSG00000167323.52186.304502763.22020-0.337904.533503.76080HepG2QKI
STIM1ENSG00000167323.52169.159501678.159100.370204.307103.26590HepG2RBM15
STIM1ENSG00000167323.51242.974501647.92170-0.406905.279204.62080HepG2RBM22
STIM1ENSG00000167323.5831.481401323.85610-0.671007.372505.74340HepG2RBM27
STIM1ENSG00000167323.51204.893102839.28850-1.2366031.6432030.23620HepG2NELFE
STIM1ENSG00000167323.51377.202802644.22780-0.9411026.5050024.94460HepG2RECQL
STIM1ENSG00000167323.51753.293701164.729700.590006.992805.98090HepG2RPLP0
STIM1ENSG00000167323.51441.719701012.771900.509409.714108.62060HepG2SAFB2
STIM1ENSG00000167323.51620.78890868.042800.900806.739205.67950HepG2SF3B1
STIM1ENSG00000167323.51895.385902656.29690-0.486908.738707.77880HepG2SF3B4
STIM1ENSG00000167323.51826.604101418.540400.364707.093706.05360HepG2SLBP
STIM1ENSG00000167323.5854.750401181.05360-0.466508.018907.01440HepG2SMN1
STIM1ENSG00000167323.5586.78860965.85610-0.719004.626403.60510HepG2SNRNP70
STIM1ENSG00000167323.51385.755802772.50980-1.0005025.6536024.53250HepG2SRSF1
STIM1ENSG00000167323.51464.029801062.215100.462807.210306.16930HepG2SRSF7
STIM1ENSG00000167323.51977.420502255.50760-0.189801.786701.32590HepG2SRSF9
STIM1ENSG00000167323.51986.034801616.020600.297304.234403.62900HepG2SSB
STIM1ENSG00000167323.51577.885002127.91510-0.431403.177401.80920HepG2SSRP1
STIM1ENSG00000167323.51587.640001095.530500.535202.886901.62780HepG2STAU1
STIM1ENSG00000167323.51275.101601661.04560-0.381503.622302.92880HepG2SUCLG1
STIM1ENSG00000167323.51557.652401107.553800.491905.158203.89330HepG2SUPT6H
STIM1ENSG00000167323.52094.677302491.79260-0.250502.853302.28450HepG2TAF15
STIM1ENSG00000167323.51137.27810854.887200.411703.222002.44520HepG2TARDBP
STIM1ENSG00000167323.5951.88100653.730500.542003.422202.32490HepG2TFIP11
STIM1ENSG00000167323.51902.558802289.88030-0.267302.525901.72430HepG2TIA1
STIM1ENSG00000167323.51514.751001114.938400.442007.327306.48620HepG2TRIM56
STIM1ENSG00000167323.52320.589901529.922900.600905.462704.26400HepG2UBE2L3
STIM1ENSG00000167323.52032.816501509.517900.429308.116207.02460HepG2UPF1
STIM1ENSG00000167323.52368.091801660.178000.5123014.4775013.46950HepG2ZNF622
STIM1ENSG00000167323.54009.569403365.665500.252503.980203.32210K562AGGF1
STIM1ENSG00000167323.52141.760402663.36800-0.314502.673901.45500K562APOBEC3C
STIM1ENSG00000167323.51731.805202498.79220-0.529006.240505.41920K562AQR
STIM1ENSG00000167323.51999.778901554.327400.363503.956102.67930K562DDX3X
STIM1ENSG00000167323.52016.697701703.410200.243502.500501.81070K562EIF2S2
STIM1ENSG00000167323.51338.90900903.135100.567907.682206.36220K562EIF3G
STIM1ENSG00000167323.51023.07130798.394300.357602.831401.47350K562FUS
STIM1ENSG00000167323.51318.433801688.83760-0.357204.365703.62990K562FXR1
STIM1ENSG00000167323.5711.295001056.39470-0.570601.952701.37090K562G3BP2
STIM1ENSG00000167323.53241.732802229.627200.539906.790305.55410K562HSPD1
STIM1ENSG00000167323.52730.170601829.691800.577302.440201.52430K562PABPN1
STIM1ENSG00000167323.51154.882601514.98570-0.391603.531302.42910K562PCBP2
STIM1ENSG00000167323.51422.492101694.66740-0.252602.124801.42380K562POLR2G
STIM1ENSG00000167323.5757.315301410.03740-0.896808.612607.28470K562PRPF8
STIM1ENSG00000167323.52559.626003293.29420-0.363603.634702.70160K562PUF60
STIM1ENSG00000167323.52781.965103503.06080-0.332504.170102.84240K562PUM1
STIM1ENSG00000167323.52779.056103432.17770-0.304504.299803.09650K562PUM2
STIM1ENSG00000167323.51281.019301586.19800-0.308302.364701.59310K562RBM22
STIM1ENSG00000167323.51935.343802260.42580-0.224003.048802.07180K562SRPK2
STIM1ENSG00000167323.51900.199901531.763200.310902.434301.45840K562SRSF5
STIM1ENSG00000167323.51973.925501583.280800.318103.022002.15900K562TIA1
STIM1ENSG00000167323.51766.785401397.089600.338602.349001.49190K562TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STIM1 is not available on ENCORE database.





4 RBPs can affect the splicing of STIM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTIM1ENSG00000167323.5chr11+4105902410599541044924104728410770641077730.171000.000000.00003includedHepG2G3BP1
SESTIM1ENSG00000167323.5chr11+410590241059954104492410472841077064107773-0.290000.000420.00674excludedHepG2U2AF2
SESTIM1ENSG00000167323.5chr11+4105902410599541044924104728410770641077730.087000.000220.04130includedHepG2TIA1
SESTIM1ENSG00000167323.5chr11+4105902410599541044924104728410770641077730.228000.000000.00000includedHepG2PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STIM1 is not avaliable on ENCORE database.