PTPN12

General Information

Gene Name       : PTPN12
Gene ID             : ENSG00000127947.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PTPN12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PTPN12ENSG00000127947.1539.9935.9737.98ENCSR000AEF
HepG2PTPN12ENSG00000127947.1538.0657.9247.99ENCSR985KAT
K562PTPN12ENSG00000127947.1547.7553.6450.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PTPN12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PTPN12 RNA is bound by 58 proteins.  







eCLIP assay for PTPN12 is not avaliable on ENCORE database.





58 proteins are bound to PTPN12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77721487377214898+3'-UTR,CDS4.045148.19556HepG2BCLAF1
chr77723651077236600+3'-UTR,CDS,intron-Proximal4.6792512.63950K562SF3B4
chr77721287177212907+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.946247.89209HepG2BCLAF1
chr77721074377210760+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.300627.95223HepG2BCLAF1
chr77723654177236605+3'-UTR,CDS,intron-Proximal5.2230111.58665K562U2AF2
chr77724011377240158+3'-UTR,CDS5.0591011.54096HepG2BCLAF1
chr77726928077269345+3'-UTR3.890764.80637K562ZC3H11A
chr77720047077200501+3'-UTR,5'-UTR,CDS3.723048.66838HepG2BCLAF1
chr77726871977268763+3'-UTR4.670716.10169K562LIN28B
chr77726914677269199+3'-UTR3.669923.68294K562PUM2
chr77723655077236601+3'-UTR,CDS,intron-Proximal3.7186212.18505HepG2BCLAF1
chr77726867777268713+3'-UTR3.211867.13168HepG2BCLAF1
chr77723654677236603+3'-UTR,CDS,intron-Proximal3.750977.83545HepG2PPIG
chr77726872577268774+3'-UTR5.4551612.24071K562TIA1
chr77726920977269251+3'-UTR3.802533.40672HepG2FUBP3
chr77726872077268764+3'-UTR4.327444.25353HepG2TIA1
chr77726879677268861+3'-UTR3.229163.65707HepG2KHSRP
chr77726917377269263+3'-UTR3.264996.07584K562ZC3H11A
chr77723660177236618+3'-UTR,CDS3.821417.65975HepG2BCLAF1
chr77721076077210819+3'-UTR,5'-UTR,CDS,intron-Distal4.8193615.10546HepG2BCLAF1
chr77723653677236586+3'-UTR,CDS,intron-Proximal3.541174.63311K562AQR
chr77724011877240157+3'-UTR,CDS3.226343.34034HepG2HLTF
chr77724008177240106+3'-UTR,CDS,intron-Proximal4.372827.97334HepG2BCLAF1
chr77726890277268972+3'-UTR3.781775.96245HepG2FUBP3
chr77723653377236588+3'-UTR,CDS,intron-Proximal4.010616.66119K562GPKOW
chr77721294177212968+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.503989.78571HepG2BCLAF1
chr77723653577236597+3'-UTR,CDS,intron-Proximal3.3260513.81936HepG2U2AF2
chr77716660177166642+5'-UTR3.6986914.15006K562FASTKD2
chr77716676777166808+5'-UTR5.1408469.59242HepG2FAM120A
chr77716680977166869+5'-UTR,CDS3.867264.32606HepG2CDC40
chr77716664077166663+5'-UTR4.5595611.61767HepG2PRPF4
chr77716675877166767+5'-UTR4.6639117.40006K562CSTF2T
chr77716659977166665+5'-UTR4.4642035.78800HepG2CSTF2T
chr77716683077166879+5'-UTR,CDS4.031838.54758K562ZNF622
chr77716667377166706+5'-UTR4.705645.27767HepG2GTF2F1
chr77716681877166877+5'-UTR,CDS6.5415120.65703HepG2FASTKD2
chr77716682677166879+5'-UTR,CDS3.381555.71803K562UCHL5
chr77716681877166883+5'-UTR,CDS3.048174.52733HepG2DGCR8
chr77716679477166890+5'-UTR,CDS3.0988317.14887HepG2RBFOX2
chr77716685677166879+5'-UTR,CDS3.921945.73889K562DDX6
chr77716660377166648+5'-UTR3.467165.04371K562DDX52
chr77716663877166663+5'-UTR5.8915012.83525HepG2GTF2F1
chr77716681077166877+5'-UTR,CDS5.1207842.40947K562GTF2F1
chr77716684877166883+5'-UTR,CDS3.2421610.83818K562AKAP8L
chr77716684677166919+5'-UTR,CDS5.1292127.86186HepG2GTF2F1
chr77716660277166664+5'-UTR3.2523110.99521K562FTO
chr77716677877166815+5'-UTR5.7020219.37131K562FAM120A
chr77716685377166916+5'-UTR,CDS3.744428.37300HepG2NCBP2
chr77716660377166668+5'-UTR3.918495.03370HepG2NCBP2
chr77716672377166735+5'-UTR4.0258814.13119HepG2FAM120A
chr77716680977166824+5'-UTR4.6786027.33615HepG2PRPF4
chr77716660077166671+5'-UTR4.334938.25469HepG2GRSF1
chr77721485877214873+5'-UTR,CDS,intron-Proximal5.697499.78571HepG2BCLAF1
chr77716660077166652+5'-UTR3.6239612.29282K562AKAP8L
chr77716659977166666+5'-UTR5.5871113.51956HepG2DROSHA
chr77716675477166804+5'-UTR4.1468014.92581HepG2GTF2F1
chr77716682177166856+5'-UTR3.335327.86992K562DDX6
chr77716681177166847+5'-UTR5.1162932.37970K562CSTF2T
chr77716677077166785+5'-UTR5.0312128.29195HepG2PRPF4
chr77716666177166684+5'-UTR5.5856025.91842HepG2FAM120A
chr77716660177166647+5'-UTR3.507606.87242K562DDX24
chr77716679477166872+5'-UTR,CDS4.3147913.49766HepG2GRSF1
chr77716680477166846+5'-UTR5.6904533.48826HepG2GTF2F1
chr77716682577166854+5'-UTR4.9721648.77567HepG2PRPF4
chr77716659877166638+5'-UTR4.9832026.54461HepG2GTF2F1
chr77716681877166890+5'-UTR,CDS4.796094.89275HepG2SRSF9
chr77716675077166778+5'-UTR5.4095317.01623K562FAM120A
chr77716660177166649+5'-UTR4.1656110.20110HepG2FASTKD2
chr77716681577166897+5'-UTR,CDS6.7642745.19232K562FAM120A
chr77716682077166892+5'-UTR,CDS4.0938327.81505K562FASTKD2
chr77716682677166853+5'-UTR4.856907.49410HepG2NCBP2
chr77716671777166754+5'-UTR4.6161713.68497HepG2PRPF4
chr77716685477166866+5'-UTR,CDS4.7622326.34513HepG2PRPF4
chr77716680877166878+5'-UTR,CDS4.6112385.25965HepG2FAM120A
chr77716666777166717+5'-UTR4.2269314.36534HepG2PRPF4
chr77716732477167389+5'-UTR,intron-Distal4.255374.72743K562NONO
chr77716681177166870+5'-UTR,CDS3.3620111.10557K562DDX51
chr77716666577166706+5'-UTR3.6680010.86870HepG2CSTF2T
chr77716674177166810+5'-UTR5.3931828.83581K562GTF2F1
chr77716664977166721+5'-UTR3.6784512.71489HepG2DDX3X
chr77716660377166651+5'-UTR3.8712330.09565K562DROSHA
chr77716661477166709+5'-UTR3.906337.25829HepG2SLTM
chr77716675877166806+5'-UTR3.258688.22028HepG2DDX3X
chr77716679977166871+5'-UTR,CDS4.073993.15159HepG2LARP4
chr77716670977166877+5'-UTR,CDS3.2002710.51903HepG2SLTM
chr77716675477166818+5'-UTR4.7677610.15105HepG2FASTKD2
chr77716737177167429+5'-UTR,intron-Distal,intron-Proximal3.5125911.47795HepG2CSTF2T
chr77716680477166894+5'-UTR,CDS4.6511557.38027HepG2CSTF2T
chr77716680977166879+5'-UTR,CDS5.5063522.66936HepG2PCBP2
chr77716671977166804+5'-UTR5.3766144.12775HepG2CSTF2T
chr77716659777166656+5'-UTR3.408676.69536K562XRCC6
chr77716673577166767+5'-UTR5.2185857.72988HepG2FAM120A
chr77716681277166872+5'-UTR,CDS4.703325.51745K562XRN2
chr77716736677167418+5'-UTR,intron-Distal5.2399610.52764K562CSTF2T
chr77716675777166802+5'-UTR4.5400213.94523K562FASTKD2
chr77716659877166669+5'-UTR6.1604654.76924K562GTF2F1
chr77716659977166661+5'-UTR4.4887413.50000HepG2PCBP2
chr77716682477166896+5'-UTR,CDS4.0890211.98540K562DDX24
chr77716659677166661+5'-UTR4.8350633.14691K562CSTF2T
chr77716682977166871+5'-UTR,CDS3.359674.48585K562NONO
chr77716676777166811+5'-UTR4.5823421.10328K562CSTF2T
chr77716662177166640+5'-UTR5.6478239.29721HepG2PRPF4
chr77716660477166640+5'-UTR4.152337.27704K562ZNF622
chr77716672377166805+5'-UTR5.3913412.69964HepG2PCBP2
chr77716680577166877+5'-UTR,CDS3.1162410.15323HepG2XRN2
chr77716682377166850+5'-UTR3.6742024.48964K562DROSHA
chr77716681177166885+5'-UTR,CDS4.040496.41599K562EWSR1
chr77716730477167356+5'-UTR,intron-Distal4.666955.55667K562EWSR1
chr77716675277166794+5'-UTR3.782058.43427HepG2RBFOX2
chr77716660177166642+5'-UTR3.058004.89821K562NCBP2
chr77716660077166649+5'-UTR4.159769.80329K562DDX6
chr77716660277166649+5'-UTR3.7034722.43872HepG2DDX3X
chr77716660177166654+5'-UTR3.080895.69386HepG2DGCR8
chr77716660077166655+5'-UTR4.6127722.49904K562FAM120A
chr77716668477166718+5'-UTR5.1298327.51412HepG2FAM120A
chr77716659977166701+5'-UTR4.7649110.28796K562EWSR1
chr77716675477166770+5'-UTR4.8793525.00675HepG2PRPF4
chr77716684777166915+5'-UTR,CDS4.8627931.65253K562CSTF2T
chr77716660077166661+5'-UTR4.6034149.90918HepG2FAM120A
chr77716678577166809+5'-UTR4.5754120.72303HepG2PRPF4
chr77716659877166621+5'-UTR5.3615738.27627HepG2PRPF4
chr77716685077166893+5'-UTR,CDS4.2057630.40845K562DROSHA
chr77716681577166878+5'-UTR,CDS4.020619.84307K562FTO
chr77716688277166936+CDS3.243776.70027HepG2PPIG
chr77726793877267955+CDS,intron-Proximal4.312045.13745K562YBX3
chr77726629077266350+CDS,intron-Proximal3.541974.57435K562SF3B4
chr77725660977256723+CDS6.1125520.70485K562IGF2BP1
chr77716687977166920+CDS4.056794.74268K562UCHL5
chr77725686377256902+CDS4.147834.50986K562IGF2BP1
chr77722997377230017+CDS,intron-Proximal4.685424.39669K562BUD13
chr77722151177221567+CDS,intron-Distal3.048669.37943HepG2BCLAF1
chr77725650077256593+CDS3.413057.25790HepG2IGF2BP1
chr77723006677230087+CDS4.754075.70640HepG2BCLAF1
chr77725616277256208+CDS3.062333.04831K562RBM15
chr77723011377230124+CDS,intron-Proximal3.128186.50801HepG2BCLAF1
chr77724025177240311+CDS,intron-Proximal3.745666.17334HepG2U2AF2
chr77725607677256155+CDS3.340247.86771K562ZNF622
chr77721294777213001+CDS,intron-Distal,intron-Proximal3.394445.34140HepG2PRPF8
chr77725686977256940+CDS3.816845.83487K562RBM15
chr77726510577265141+CDS3.138716.59678HepG2BCLAF1
chr77725673477256840+CDS5.3857510.33424HepG2IGF2BP1
chr77723004977230093+CDS4.130084.45558HepG2GRWD1
chr77725685777256917+CDS4.347755.64683K562YBX3
chr77722716777227220+CDS,intron-Proximal3.086456.21720K562BUD13
chr77725606177256144+CDS4.675183.74641HepG2ZNF800
chr77725653477256601+CDS3.114655.09613K562IGF2BP2
chr77725667377256741+CDS3.402546.74819K562YBX3
chr77726630377266364+CDS,intron-Proximal3.295274.50387HepG2AQR
chr77725674177256818+CDS3.125354.98411K562RBM15
chr77725619177256241+CDS3.174243.61668HepG2IGF2BP1
chr77725638877256449+CDS3.485885.00403K562IGF2BP1
chr77726516277265215+CDS,intron-Proximal3.234825.46476K562AQR
chr77726516177265209+CDS,intron-Proximal3.955284.16174HepG2PRPF8
chr77726168477261737+CDS,intron-Distal3.258288.77086HepG2BCLAF1
chr77716687777166894+CDS3.074154.48692K562GTF2F1
chr77716687977166954+CDS3.203089.66202K562ZNF622
chr77716693377167003+CDS,intron-Proximal3.8866822.16071HepG2PRPF8
chr77725611577256175+CDS3.213175.90347K562IGF2BP1
chr77726631377266376+CDS,intron-Proximal3.442344.83230K562AQR
chr77724784777247883+CDS,intron-Proximal3.327426.97987K562ZNF622
chr77723762177237747+intron-Distal3.709774.79415HepG2KHSRP
chr77723017277230269+intron-Distal,intron-Proximal3.234655.47590K562PRPF8
chr77721315677213229+intron-Distal3.876373.49896K562KHDRBS1
chr77716823877168309+intron-Distal,intron-Proximal4.596133.72398HepG2SFPQ
chr77723642777236515+intron-Distal,intron-Proximal5.256928.24653K562KHSRP
chr77720815577208204+intron-Distal6.0317710.44346HepG2QKI
chr77723795677238008+intron-Distal4.185563.18981K562PTBP1
chr77716717877167207+intron-Distal4.1877717.03580HepG2CSTF2T
chr77724141877241471+intron-Distal4.770093.35169HepG2U2AF2
chr77716706377167102+intron-Distal3.457316.96093HepG2PRPF4
chr77716748077167503+intron-Distal,intron-Proximal4.369089.91366HepG2CSTF2T
chr77720814977208282+intron-Distal7.1875724.07734K562QKI
chr77723628677236396+intron-Distal4.827015.60990HepG2KHSRP
chr77721496477215011+intron-Distal,intron-Proximal3.149293.07751K562KHSRP
chr77720181077201885+intron-Distal3.474753.35377HepG2QKI
chr77724544677245555+intron-Distal3.799785.36899HepG2PTBP1
chr77723795477238028+intron-Distal3.761136.58004HepG2U2AF2
chr77722178677221870+intron-Distal4.310259.63457K562KHSRP
chr77720065877200748+intron-Distal4.616377.29386HepG2U2AF2
chr77724543377245536+intron-Distal3.928287.91801K562PTBP1
chr77724446677244582+intron-Distal4.207304.54401K562KHSRP
chr77718248477182673+intron-Distal3.732934.90204K562TARDBP
chr77720822077208238+intron-Distal4.9962810.13088HepG2QKI
chr77720820477208220+intron-Distal5.9549610.09004HepG2QKI
chr77721423777214292+intron-Distal3.943893.53160K562RBFOX2
chr77723761677237764+intron-Distal3.7878811.02335K562KHSRP
chr77721903877219098+intron-Distal3.953133.89294K562KHSRP
chr77725708077257116+intron-Distal,intron-Proximal3.884433.02181K562PRPF8
chr77716718177167233+intron-Distal4.2695217.24371HepG2FAM120A
chr77719878677198848+intron-Distal4.7320412.70600HepG2QKI
chr77716717277167217+intron-Distal4.119468.23657K562CSTF2T
chr77724050877240588+intron-Distal4.842687.17304K562KHSRP
chr77723632277236427+intron-Distal4.6639412.68814K562KHSRP
chr77726517877265283+intron-Distal,intron-Proximal4.841548.14619K562KHSRP
chr77724065577240710+intron-Distal4.145828.64802HepG2U2AF2
chr77716731577167342+intron-Distal3.331413.15890HepG2GTF2F1
chr77717929577179354+intron-Distal4.328093.83958HepG2QKI
chr77716720777167234+intron-Distal4.3388520.41498HepG2CSTF2T
chr77716745677167512+intron-Distal,intron-Proximal3.9048710.72776K562CSTF2T
chr77718373177183817+intron-Distal4.296205.04227HepG2HNRNPL
chr77716705977167115+intron-Distal,intron-Proximal3.8518918.43188HepG2CSTF2T
chr77716706977167118+intron-Distal4.068605.81451K562CSTF2T
chr77723528477235342+intron-Distal3.550195.59906HepG2HNRNPC
chr77716701977167029+intron-Proximal3.478894.36184HepG2PRPF4
chr77716699477167019+intron-Proximal3.601445.32184HepG2PRPF4
chr77723016277230217+intron-Proximal3.195455.42680K562KHSRP
chr77721480277214857+intron-Proximal4.5837412.14994K562SF3B4
chr77716698977167008+intron-Proximal4.715788.89218HepG2RBM22
chr77716700877167035+intron-Proximal4.800389.24813HepG2RBM22
chr77716699077167037+intron-Proximal4.6432819.09612HepG2CSTF2T
chr77720051877200602+intron-Proximal5.082314.83371K562EFTUD2
chr77716698977167035+intron-Proximal4.195253.02711K562EWSR1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PTPN12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PTPN12 is not available on ENCORE database.

  • 101 RBPs can affect the levels of PTPN12.  








The Knockdown/knockout RNA-Seq assay for PTPN12 is not available on ENCORE database.





101 RBPs can affect the gene expression of PTPN12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PTPN12ENSG00000127947.112597.403304025.05930-0.631907.334705.89990HepG2ABCF1
PTPN12ENSG00000127947.113312.143202519.784900.394408.975908.00890HepG2ACO1
PTPN12ENSG00000127947.114099.307203472.199200.239403.352702.60950HepG2AUH
PTPN12ENSG00000127947.111662.125402165.54170-0.381702.205501.37200HepG2BCCIP
PTPN12ENSG00000127947.112829.878303772.19820-0.414704.630903.88040HepG2BOP1
PTPN12ENSG00000127947.113311.145504108.45280-0.311303.911903.01810HepG2CALR
PTPN12ENSG00000127947.113615.571405395.19010-0.577505.078203.73810HepG2CCAR1
PTPN12ENSG00000127947.111689.023302519.29660-0.5768017.5282016.16750HepG2CKAP4
PTPN12ENSG00000127947.112613.651704049.44250-0.631704.369603.40440HepG2CNOT7
PTPN12ENSG00000127947.112416.211003463.08730-0.519306.225805.22550HepG2CPSF6
PTPN12ENSG00000127947.112591.906203024.36840-0.222602.393501.45070HepG2YBX3
PTPN12ENSG00000127947.114044.960803493.414100.211402.377501.77380HepG2CELF1
PTPN12ENSG00000127947.112803.311903756.62960-0.4223012.4297011.03980HepG2DAZAP1
PTPN12ENSG00000127947.111623.530702330.46730-0.5215013.4073011.86700HepG2DDX19B
PTPN12ENSG00000127947.112387.610903028.50410-0.343005.014903.49070HepG2DDX1
PTPN12ENSG00000127947.111777.941402359.35240-0.408204.300703.47410HepG2DDX21
PTPN12ENSG00000127947.111197.015101613.17030-0.430503.230701.72290HepG2DDX28
PTPN12ENSG00000127947.111240.490203747.23100-1.5949040.8740038.75390HepG2DDX3X
PTPN12ENSG00000127947.115460.624703932.588800.473502.284801.39930HepG2DDX59
PTPN12ENSG00000127947.114343.819503218.934100.432303.428502.74900HepG2DDX6
PTPN12ENSG00000127947.112375.516102864.20220-0.269902.225801.34730HepG2DHX30
PTPN12ENSG00000127947.111748.490102410.76670-0.463409.101808.01480HepG2DKC1
PTPN12ENSG00000127947.112436.447702969.58410-0.285503.699402.89290HepG2DNAJC21
PTPN12ENSG00000127947.112263.480402943.53470-0.379009.071907.97160HepG2DNAJC2
PTPN12ENSG00000127947.111999.626302901.63630-0.537105.955704.64620HepG2EEF2
PTPN12ENSG00000127947.111546.447902418.99390-0.645408.150906.24730HepG2EFTUD2
PTPN12ENSG00000127947.111785.184803094.45420-0.7936011.2835010.13390HepG2EIF2S1
PTPN12ENSG00000127947.113125.089602355.509900.407803.878802.81940HepG2EIF3D
PTPN12ENSG00000127947.111388.914703419.74280-1.2999023.9402022.10290HepG2EIF4A3
PTPN12ENSG00000127947.113176.173503705.84260-0.222503.268202.37260HepG2EIF4G1
PTPN12ENSG00000127947.111857.208702462.33270-0.406904.647503.57040HepG2EWSR1
PTPN12ENSG00000127947.112628.093602211.922700.248601.985401.31050HepG2FUBP3
PTPN12ENSG00000127947.111690.528602097.28560-0.311002.294901.48630HepG2GEMIN5
PTPN12ENSG00000127947.112683.070403925.68990-0.549105.651804.75860HepG2GPKOW
PTPN12ENSG00000127947.111990.666302998.03550-0.590808.764007.70890HepG2HNRNPA1
PTPN12ENSG00000127947.111270.324203334.81760-1.3924041.6251039.31890HepG2HNRNPC
PTPN12ENSG00000127947.112496.101502906.03110-0.219402.418201.74460HepG2HNRNPF
PTPN12ENSG00000127947.112581.001403422.10880-0.4070011.7362010.43330HepG2HNRNPL
PTPN12ENSG00000127947.112788.071103746.35720-0.426204.195703.43600HepG2HNRNPLL
PTPN12ENSG00000127947.111827.730403312.76550-0.8580033.9498032.03840HepG2HNRNPU
PTPN12ENSG00000127947.112092.440102861.63180-0.451706.267805.22150HepG2IGF2BP1
PTPN12ENSG00000127947.112305.392303253.46810-0.497005.114104.22130HepG2IGF2BP2
PTPN12ENSG00000127947.112665.349403383.87050-0.344308.775107.54250HepG2ILF2
PTPN12ENSG00000127947.114228.651105695.03520-0.429503.188302.29400HepG2LARP4
PTPN12ENSG00000127947.112322.713803451.56010-0.571406.266905.28940HepG2MAGOH
PTPN12ENSG00000127947.112592.835503470.88150-0.420803.334802.64780HepG2MATR3
PTPN12ENSG00000127947.111476.259303552.64310-1.2669025.4433023.65840HepG2NCBP2
PTPN12ENSG00000127947.112336.170303163.87340-0.437503.856903.01550HepG2PABPC4
PTPN12ENSG00000127947.11907.345001642.81840-0.8564010.735509.28270HepG2PRPF8
PTPN12ENSG00000127947.111850.204203555.78600-0.9425022.7867021.29580HepG2PUF60
PTPN12ENSG00000127947.113115.550403774.50940-0.276806.396705.57340HepG2PUM1
PTPN12ENSG00000127947.112750.071903771.82350-0.455807.629606.53970HepG2PUM2
PTPN12ENSG00000127947.112283.178202566.57310-0.168801.916001.38410HepG2PUS1
PTPN12ENSG00000127947.114953.237002843.267000.800705.970104.96120HepG2RAVER1
PTPN12ENSG00000127947.115051.656004292.699400.234802.515801.69460HepG2RBM15
PTPN12ENSG00000127947.113665.031903121.417300.231502.071601.48290HepG2RBM25
PTPN12ENSG00000127947.112065.891503011.53930-0.543702.286501.39340HepG2RBM27
PTPN12ENSG00000127947.112809.435003534.26520-0.331105.622204.89400HepG2NELFE
PTPN12ENSG00000127947.112660.889103291.83490-0.307004.964304.16870HepG2RECQL
PTPN12ENSG00000127947.112454.561303130.19570-0.350803.367302.62400HepG2RPLP0
PTPN12ENSG00000127947.112122.295204065.39540-0.9378011.164509.60020HepG2RPS3A
PTPN12ENSG00000127947.112145.671501625.125200.400803.246702.40450HepG2RRP9
PTPN12ENSG00000127947.112581.307202950.13040-0.192702.563001.93850HepG2SAFB2
PTPN12ENSG00000127947.113056.561103708.15970-0.278802.356901.70310HepG2SF3B1
PTPN12ENSG00000127947.112959.462803409.20950-0.204103.401102.63660HepG2SLBP
PTPN12ENSG00000127947.112886.176203440.29350-0.253405.049404.22360HepG2SMN1
PTPN12ENSG00000127947.115413.241403763.390800.5244017.6782016.70080HepG2SRFBP1
PTPN12ENSG00000127947.112399.748603451.05920-0.5242014.2563013.36200HepG2SRSF1
PTPN12ENSG00000127947.112515.712303510.68360-0.4808012.0182010.84040HepG2SRSF5
PTPN12ENSG00000127947.112063.429002855.00750-0.468509.417408.26510HepG2SRSF7
PTPN12ENSG00000127947.113810.397002807.682000.4405011.2314010.25100HepG2SRSF9
PTPN12ENSG00000127947.111821.877503267.51500-0.8428033.0606031.73680HepG2SSB
PTPN12ENSG00000127947.113790.127802656.952200.512403.406002.06330HepG2SUB1
PTPN12ENSG00000127947.113186.123203992.73190-0.325607.700106.74790HepG2SUCLG1
PTPN12ENSG00000127947.111888.146802745.25190-0.540007.443605.95900HepG2SUPT6H
PTPN12ENSG00000127947.112661.155403651.51030-0.456405.216504.26560HepG2TARDBP
PTPN12ENSG00000127947.111372.128003218.75530-1.2301043.3847041.84760HepG2TIAL1
PTPN12ENSG00000127947.114968.353203477.395600.514705.756604.86740HepG2U2AF1
PTPN12ENSG00000127947.111587.291501252.191800.342002.653101.91010HepG2UCHL5
PTPN12ENSG00000127947.112621.918202999.53720-0.194102.474401.80800HepG2UPF1
PTPN12ENSG00000127947.112316.292403083.07320-0.412606.051204.55800HepG2UTP18
PTPN12ENSG00000127947.112361.931002895.92890-0.294104.603703.86310HepG2UTP3
PTPN12ENSG00000127947.112386.906603641.33690-0.609304.933703.45730HepG2XPO5
PTPN12ENSG00000127947.114036.735702794.980700.530303.699402.21980HepG2XRCC5
PTPN12ENSG00000127947.111256.573502086.51470-0.731608.549507.28990HepG2XRN2
PTPN12ENSG00000127947.112306.391601808.190500.351003.436902.10540K562AARS
PTPN12ENSG00000127947.112177.046503208.67540-0.559607.706506.80810K562AQR
PTPN12ENSG00000127947.116488.882005035.521500.365705.869404.45060K562CELF1
PTPN12ENSG00000127947.111390.100301778.63070-0.355603.447002.26850K562DDX3X
PTPN12ENSG00000127947.111516.327501184.249300.356502.714901.38710K562DNAJC21
PTPN12ENSG00000127947.111507.963801953.79330-0.373705.487903.75190K562EIF2S1
PTPN12ENSG00000127947.111862.831902230.11760-0.259602.893102.16080K562EIF2S2
PTPN12ENSG00000127947.113355.474902737.142100.293702.129101.33210K562FTO
PTPN12ENSG00000127947.111984.077301622.054300.290502.856501.49430K562FUS
PTPN12ENSG00000127947.111641.500401932.53580-0.235502.297701.73790K562FXR1
PTPN12ENSG00000127947.113071.805102081.048500.561704.547203.59200K562G3BP2
PTPN12ENSG00000127947.112342.848302971.94640-0.343103.618302.75780K562GRSF1
PTPN12ENSG00000127947.111330.127001979.22210-0.573404.888604.11740K562HNRNPC
PTPN12ENSG00000127947.112937.454803520.70550-0.261302.258401.31280K562HNRNPL
PTPN12ENSG00000127947.111884.373802399.70420-0.348803.264401.94210K562IGF2BP3
PTPN12ENSG00000127947.112080.894302474.78280-0.250102.141001.33950K562MATR3
PTPN12ENSG00000127947.113263.626502495.036700.387302.507301.67700K562NAA15
PTPN12ENSG00000127947.111331.756501855.53790-0.478506.263104.44640K562NCBP2
PTPN12ENSG00000127947.113030.086101985.651100.609603.801402.10350K562RAVER1
PTPN12ENSG00000127947.111505.785501876.95380-0.317902.797301.70840K562SAFB
PTPN12ENSG00000127947.111622.974002361.77370-0.541207.892106.70620K562SRSF1
PTPN12ENSG00000127947.111751.990602230.40160-0.348302.729601.68970K562SRSF5
PTPN12ENSG00000127947.114473.113603470.206600.366203.121101.77900K562STAU1
PTPN12ENSG00000127947.111871.898202390.36990-0.352702.941002.21180K562TARDBP
PTPN12ENSG00000127947.111811.619602305.75520-0.348003.721102.75280K562TIA1
PTPN12ENSG00000127947.113375.551702921.236100.208402.634601.39890K562TROVE2
PTPN12ENSG00000127947.112625.060202017.618700.379602.815101.71210K562U2AF1
PTPN12ENSG00000127947.112749.616202083.628000.400005.318004.20900K562U2AF2
PTPN12ENSG00000127947.112004.244101586.442200.337202.662701.66590K562UCHL5
PTPN12ENSG00000127947.114465.078003614.677300.304702.876401.99370K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PTPN12 is not available on ENCORE database.





17 RBPs can affect the splicing of PTPN12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPTPN12ENSG00000127947.11chr7+772107437721082077200394772005037721485977214898-0.122000.000040.00137excludedK562SF3B4
SEPTPN12ENSG00000127947.11chr7+772128717721296777210743772108207721485977214898-0.053000.000710.02385excludedK562AKAP8L
SEPTPN12ENSG00000127947.11chr7+7721074377210820772003947720050377214859772148980.116000.000000.00175includedK562METAP2
SEPTPN12ENSG00000127947.11chr7+772663127726636577265098772651667726794077268258-0.118000.000000.00000excludedK562AQR
SEPTPN12ENSG00000127947.11chr7+772107437721082077200266772005037721485977214898-0.161000.000000.00002excludedK562AQR
SEPTPN12ENSG00000127947.11chr7+772128717721296777210743772108207721485977214898-0.125000.000000.00000excludedK562PUS1
SEPTPN12ENSG00000127947.11chr7+7721074377210820772003947720050377214859772148980.098000.000620.09396includedK562GPKOW
SEPTPN12ENSG00000127947.11chr7+772107437721082077200394772005037721485977214898-0.078000.002910.05361excludedK562U2AF1
SEPTPN12ENSG00000127947.11chr7+772128717721296777200469772005037721485977214898-0.083000.000020.00392excludedK562HNRNPUL1
SEPTPN12ENSG00000127947.11chr7+772107437721082077200394772005037721485977214898-0.181000.000000.00000excludedK562UTP18
SEPTPN12ENSG00000127947.11chr7+772128717721296777210743772108207721485977214898-0.052000.000790.02283excludedK562RBM15
SEPTPN12ENSG00000127947.11chr7+772128717721296777210743772108207721485977214898-0.084000.000010.00044excludedK562AGGF1
SEPTPN12ENSG00000127947.11chr7+772663347726636577265098772651667726794077268048-0.135000.000000.00006excludedK562SF3B1
SEPTPN12ENSG00000127947.11chr7+7721074377210820772003947720050377214859772148980.054000.000980.05965includedHepG2SRSF9
A3SSPTPN12ENSG00000127947.11chr7+7724777377247882772477967724788277240264772403630.066000.000120.00101longerK562AQR
MXEPTPN12ENSG00000127947.11chr7+77214859772148987722150177221573772128717721296777227158772272180.116000.000510.013421includedHepG2FTO
MXEPTPN12ENSG00000127947.11chr7+77214859772148987722150177221573772003947720050377227158772272180.147000.000000.000001includedK562PUS1
MXEPTPN12ENSG00000127947.11chr7+77214859772148987722150177221573772003947720050377227158772272180.177000.000000.000021includedK562AQR
MXEPTPN12ENSG00000127947.11chr7+77212871772129677721485977214898772107437721082077221501772215730.104000.008380.070581includedHepG2SFPQ
MXEPTPN12ENSG00000127947.11chr7+77212871772129677721485977214898772107437721082077221501772215730.100000.012570.065101includedHepG2U2AF2
MXEPTPN12ENSG00000127947.11chr7+77227158772272187722998077230123772215017722157377236551772366180.113000.000470.004291includedHepG2U2AF2
MXEPTPN12ENSG00000127947.11chr7+77227158772272187723655177236618772215017722157377240081772401590.113000.000430.004041includedHepG2U2AF2
MXEPTPN12ENSG00000127947.11chr7+77212871772129677721485977214898772107437721082077221501772215730.119000.001390.023791includedHepG2HNRNPUL1
MXEPTPN12ENSG00000127947.11chr7+7721485977214898772215017722157377200394772005037722715877227218-0.119000.000010.006672includedK562METAP2
MXEPTPN12ENSG00000127947.11chr7+7722150177221573772271587722721877214859772148987722998077230123-0.147000.002010.047912includedK562PPIL4
MXEPTPN12ENSG00000127947.11chr7+77214859772148987722150177221573772003947720050377227158772272180.137000.000300.007521includedK562SF3B4
MXEPTPN12ENSG00000127947.11chr7+77214859772148987722150177221573772003947720050377227158772272180.075000.000900.021901includedK562HNRNPUL1
MXEPTPN12ENSG00000127947.11chr7+7722715877227218772299807723012377221501772215737723655177236618-0.121000.001870.035012includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PTPN12 is not avaliable on ENCORE database.