CREG1

General Information

Gene Name       : CREG1
Gene ID             : ENSG00000143162.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CREG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CREG1ENSG00000143162.816.1014.8715.48ENCSR000AEF
HepG2CREG1ENSG00000143162.817.2834.1825.73ENCSR985KAT
K562CREG1ENSG00000143162.8117.56132.77125.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CREG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CREG1 RNA is bound by 20 proteins.  







eCLIP assay for CREG1 is not avaliable on ENCORE database.





20 proteins are bound to CREG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1167511127167511141-3'-UTR,intron-Distal4.4569760.73212K562UPF1
chr1167511141167511161-3'-UTR,intron-Distal4.4265580.25176K562UPF1
chr1167511232167511347-3'-UTR,intron-Distal4.320353.61011HepG2AKAP1
chr1167511330167511405-3'-UTR,intron-Distal4.493219.49653K562IGF2BP1
chr1167510918167510945-3'-UTR,intron-Distal3.5452010.87798K562YBX3
chr1167510831167510873-3'-UTR,intron-Distal4.3659331.18318K562FAM120A
chr1167511088167511209-3'-UTR,intron-Distal5.6502910.25977HepG2UPF1
chr1167510441167510473-3'-UTR,intron-Distal5.8562647.64882K562LIN28B
chr1167511102167511171-3'-UTR,intron-Distal3.528038.58246HepG2SUB1
chr1167510588167510636-3'-UTR,intron-Distal3.8972313.69514K562IGF2BP1
chr1167511319167511408-3'-UTR,intron-Distal5.5808815.65443HepG2SUB1
chr1167510396167510477-3'-UTR,intron-Distal4.942807.69585HepG2LIN28B
chr1167511330167511385-3'-UTR,intron-Distal3.3650310.64078K562PABPC4
chr1167511096167511189-3'-UTR,intron-Distal3.611914.17280HepG2AKAP1
chr1167511161167511212-3'-UTR,intron-Distal4.5542677.61658K562UPF1
chr1167510479167510511-3'-UTR,intron-Distal4.8081412.30997K562LIN28B
chr1167511264167511308-3'-UTR,intron-Distal3.2446423.29189K562UPF1
chr1167510397167510441-3'-UTR,intron-Distal5.4234840.44407K562LIN28B
chr1167511140167511165-3'-UTR,intron-Distal4.70495400.00000K562FAM120A
chr1167510986167511040-3'-UTR,intron-Distal5.0270044.24947K562FAM120A
chr1167511512167511587-3'-UTR,CDS,intron-Distal4.030795.93727K562SF3B4
chr1167510328167510375-3'-UTR,intron-Distal3.971015.73713K562IGF2BP1
chr1167510671167510720-3'-UTR,intron-Distal3.8334819.59337K562FAM120A
chr1167511475167511497-3'-UTR,intron-Distal3.316215.51805K562SND1
chr1167510998167511127-3'-UTR,intron-Distal4.24809400.00000K562UPF1
chr1167511055167511113-3'-UTR,intron-Distal4.3055577.16453K562FAM120A
chr1167510465167510513-3'-UTR,intron-Distal4.5213732.79789K562FAM120A
chr1167511165167511190-3'-UTR,intron-Distal4.2996960.01041K562FAM120A
chr1167510334167510402-3'-UTR,intron-Distal6.2217714.42024HepG2SUB1
chr1167510528167510588-3'-UTR,intron-Distal3.7253913.36708K562IGF2BP1
chr1167510523167510579-3'-UTR,intron-Distal4.854547.59286K562IGF2BP2
chr1167510573167510595-3'-UTR,intron-Distal4.9905961.55452K562FAM120A
chr1167511213167511264-3'-UTR,intron-Distal3.8584941.96433K562UPF1
chr1167511511167511538-3'-UTR,CDS,intron-Distal4.5758812.71765K562LIN28B
chr1167511243167511299-3'-UTR,intron-Distal4.025566.49446K562IGF2BP1
chr1167510768167510794-3'-UTR,intron-Distal3.4181715.11366K562UPF1
chr1167511498167511556-3'-UTR,CDS,intron-Distal3.154743.68342K562U2AF2
chr1167510787167510831-3'-UTR,intron-Distal4.8933234.17374K562FAM120A
chr1167510474167510479-3'-UTR,intron-Distal5.7843813.25086K562LIN28B
chr1167511112167511163-3'-UTR,intron-Distal3.927413.56497HepG2FAM120A
chr1167510524167510571-3'-UTR,intron-Distal4.0256566.10088K562FAM120A
chr1167511190167511309-3'-UTR,intron-Distal3.97287400.00000K562FAM120A
chr1167511331167511356-3'-UTR,intron-Distal3.7616722.55625K562FAM120A
chr1167510501167510647-3'-UTR,intron-Distal3.53374400.00000K562UPF1
chr1167511176167511261-3'-UTR,intron-Distal4.838644.83789HepG2FAM120A
chr1167510537167510640-3'-UTR,intron-Distal4.598539.32514HepG2UPF1
chr1167510595167510637-3'-UTR,intron-Distal4.9999359.92078K562FAM120A
chr1167510449167510501-3'-UTR,intron-Distal3.5755822.68244K562UPF1
chr1167511455167511505-3'-UTR,intron-Distal4.083715.33915HepG2SUB1
chr1167511113167511140-3'-UTR,intron-Distal4.50942400.00000K562FAM120A
chr1167522921167522991-5'-UTR,CDS,intron-Distal4.7707313.83562HepG2DDX3X
chr1167522920167522996-5'-UTR,CDS,intron-Distal4.5385311.22180K562DDX3X
chr1167522926167522989-5'-UTR,CDS,intron-Distal4.623447.67648K562GEMIN5
chr1167522623167522664-CDS,intron-Distal4.810984.06516HepG2SND1
chr1167517252167517270-CDS,intron-Distal5.1475110.06469K562YBX3
chr1167517270167517293-CDS,intron-Distal3.391268.65339K562YBX3
chr1167515377167515423-CDS,intron-Distal,intron-Proximal4.2805910.22178K562SND1
chr1167517238167517280-CDS,intron-Distal,intron-Proximal3.724918.14951K562SND1
chr1167522659167522667-CDS,intron-Distal3.6597028.31682K562YBX3
chr1167515423167515491-CDS,intron-Distal,intron-Proximal4.4822015.99770K562SND1
chr1167517297167517349-CDS,intron-Distal3.7257214.11697K562SND1
chr1167522629167522763-CDS,intron-Distal4.326097.55572HepG2RPS3
chr1167522624167522631-CDS,intron-Distal3.1829017.75786K562YBX3
chr1167522623167522673-CDS,intron-Distal3.592444.53936K562METAP2
chr1167522700167522714-CDS,intron-Distal4.748626.76328K562IGF2BP2
chr1167522717167522783-CDS,intron-Distal4.3066612.33657K562SND1
chr1167517280167517297-CDS,intron-Distal3.655086.65537K562SND1
chr1167517345167517358-CDS,intron-Distal4.021543.01207K562IGF2BP2
chr1167522862167522920-CDS,intron-Distal4.8376213.46875K562DDX3X
chr1167515337167515352-CDS,intron-Distal,intron-Proximal4.3208410.79362K562LIN28B
chr1167522631167522659-CDS,intron-Distal3.3544330.88127K562YBX3
chr1167522714167522765-CDS,intron-Distal3.507945.28597K562IGF2BP2
chr1167522548167522628-CDS,intron-Distal3.388895.75231K562AQR
chr1167517239167517344-CDS,intron-Distal3.634474.94895K562IGF2BP1
chr1167522866167522921-CDS,intron-Distal4.328747.19936K562GEMIN5
chr1167522833167522921-CDS,intron-Distal4.236789.76063HepG2DDX3X
chr1167522795167522935-CDS,intron-Distal5.917816.81676HepG2RPS3
chr1167522811167522850-CDS,intron-Distal3.694924.46401K562DDX3X
chr1167522666167522717-CDS,intron-Distal3.6773712.57125K562SND1
chr1167516691167516789-intron-Distal3.060243.81669K562KHDRBS1
chr1167510131167510198-intron-Distal,intron-Proximal4.198814.71107K562CSTF2T
chr1167520071167520220-intron-Distal3.176135.05821K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CREG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CREG1 is not available on ENCORE database.

  • 101 RBPs can affect the levels of CREG1.  








The Knockdown/knockout RNA-Seq assay for CREG1 is not available on ENCORE database.





101 RBPs can affect the gene expression of CREG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CREG1ENSG00000143162.7389.12980601.58030-0.628507.667606.75780HepG2ACO1
CREG1ENSG00000143162.7764.69600546.709100.484003.605402.48430HepG2ADAR
CREG1ENSG00000143162.71645.140901243.683000.403502.644002.12360HepG2AKAP1
CREG1ENSG00000143162.7475.68420604.34720-0.345402.679401.92340HepG2AKAP8L
CREG1ENSG00000143162.7713.57990916.76260-0.361503.783403.00300HepG2AUH
CREG1ENSG00000143162.7407.83770593.03890-0.540104.015502.69150HepG2CPSF7
CREG1ENSG00000143162.7696.92580897.43050-0.364803.822803.08890HepG2CELF1
CREG1ENSG00000143162.71804.457501191.404100.598806.034005.14450HepG2DDX3X
CREG1ENSG00000143162.7319.83760633.38050-0.985708.363607.10020HepG2DDX55
CREG1ENSG00000143162.7601.610101023.32330-0.766407.009606.06390HepG2DDX6
CREG1ENSG00000143162.7853.95340575.530800.569205.651804.74760HepG2DKC1
CREG1ENSG00000143162.7414.47700550.51350-0.409503.152302.40570HepG2DNAJC21
CREG1ENSG00000143162.7716.54270536.034100.418602.507001.62670HepG2EEF2
CREG1ENSG00000143162.7601.843001096.90950-0.8660010.179708.93310HepG2FXR1
CREG1ENSG00000143162.7771.578201017.63420-0.399302.492301.85910HepG2G3BP1
CREG1ENSG00000143162.7702.85190387.434400.859205.885704.57590HepG2GEMIN5
CREG1ENSG00000143162.7361.34780541.11090-0.582503.610102.88740HepG2GPKOW
CREG1ENSG00000143162.7518.05930265.324000.965304.492203.08200HepG2GRSF1
CREG1ENSG00000143162.7314.07740555.78750-0.823407.825106.82150HepG2HNRNPA1
CREG1ENSG00000143162.7863.77750618.207800.482503.870003.06110HepG2HNRNPC
CREG1ENSG00000143162.7155.14540248.28690-0.678403.063001.47170HepG2HNRNPD
CREG1ENSG00000143162.7385.45250468.49490-0.281501.906501.30370HepG2HNRNPF
CREG1ENSG00000143162.7679.020001030.23720-0.601505.728504.75190HepG2HNRNPK
CREG1ENSG00000143162.7745.95650879.23770-0.237202.069001.47510HepG2HNRNPL
CREG1ENSG00000143162.7808.90590516.393000.647405.620004.75580HepG2HNRNPLL
CREG1ENSG00000143162.7819.01070614.120800.415304.564303.80200HepG2HNRNPU
CREG1ENSG00000143162.7654.210901034.43480-0.661006.158005.18780HepG2IGF2BP2
CREG1ENSG00000143162.7499.18570970.64380-0.959404.674903.40490HepG2IGF2BP3
CREG1ENSG00000143162.7489.055001097.29170-1.1659016.7041015.16060HepG2MAGOH
CREG1ENSG00000143162.7720.085901103.46080-0.615804.990804.16520HepG2MATR3
CREG1ENSG00000143162.7838.104101129.47610-0.430502.929702.27940HepG2NCBP2
CREG1ENSG00000143162.7419.74480609.07800-0.537103.834202.14820HepG2NIP7
CREG1ENSG00000143162.7789.44810957.03180-0.277702.212101.52980HepG2NOL12
CREG1ENSG00000143162.7162.15320261.94330-0.691902.635001.77310HepG2PABPC1
CREG1ENSG00000143162.7341.20360547.74720-0.682907.362306.20190HepG2PPIL4
CREG1ENSG00000143162.7721.11210523.932300.460704.870603.87600HepG2PRPF4
CREG1ENSG00000143162.7745.76420488.695300.609704.948603.90270HepG2PRPF8
CREG1ENSG00000143162.7647.06300966.29280-0.578605.620204.89610HepG2PTBP1
CREG1ENSG00000143162.71259.72070913.516900.463502.004401.48610HepG2PUF60
CREG1ENSG00000143162.7836.29440969.67570-0.213502.222801.67870HepG2PUM1
CREG1ENSG00000143162.7831.05080612.738100.439605.115804.32470HepG2PUS1
CREG1ENSG00000143162.7651.408001046.66750-0.684206.472505.57370HepG2QKI
CREG1ENSG00000143162.7471.63480659.54810-0.483802.441301.44800HepG2RCC2
CREG1ENSG00000143162.7458.72930688.23580-0.585303.123502.12230HepG2RPS10
CREG1ENSG00000143162.7562.24550287.661300.966707.539406.23530HepG2RPS3A
CREG1ENSG00000143162.7283.23430546.90350-0.9493013.9162012.63630HepG2SAFB2
CREG1ENSG00000143162.7982.38810657.278400.579702.625101.96850HepG2SF3A3
CREG1ENSG00000143162.7382.03880511.12120-0.419902.353301.70000HepG2SF3B1
CREG1ENSG00000143162.7691.899801006.16050-0.540205.417704.63710HepG2SF3B4
CREG1ENSG00000143162.7531.67120637.78490-0.262502.006801.44510HepG2SMN1
CREG1ENSG00000143162.7877.82910568.714100.626103.605902.70990HepG2SNRNP70
CREG1ENSG00000143162.7428.02720993.64030-1.2150031.1122029.90580HepG2SRFBP1
CREG1ENSG00000143162.71729.925701050.162700.7200016.9251015.96570HepG2SRSF1
CREG1ENSG00000143162.7760.86880901.88960-0.245302.234701.66500HepG2SRSF5
CREG1ENSG00000143162.7582.64930854.31940-0.552105.693104.95110HepG2SRSF9
CREG1ENSG00000143162.7751.392001025.76140-0.449102.963402.32440HepG2SUCLG1
CREG1ENSG00000143162.7320.47020491.01350-0.615604.979403.73790HepG2SUPT6H
CREG1ENSG00000143162.7905.57210503.349900.8472010.109208.85030HepG2TARDBP
CREG1ENSG00000143162.7213.11030422.65050-0.987908.025606.50060HepG2TFIP11
CREG1ENSG00000143162.7687.42800867.36070-0.335402.685801.86110HepG2TIA1
CREG1ENSG00000143162.7245.04110622.00910-1.3439016.8688015.26470HepG2U2AF1
CREG1ENSG00000143162.7346.01130944.48660-1.4487020.3102018.06840HepG2UBE2L3
CREG1ENSG00000143162.78634.094003497.657701.3036036.4204033.52210K562BOP1
CREG1ENSG00000143162.71786.623701398.839300.352902.666301.63870K562CCAR1
CREG1ENSG00000143162.74972.906303718.867800.419106.039704.88550K562CPSF6
CREG1ENSG00000143162.72162.115501527.946000.500803.745001.57340K562YBX3
CREG1ENSG00000143162.73706.135502774.463500.417605.649404.09450K562DDX3X
CREG1ENSG00000143162.76313.315704652.039700.4404011.199409.98550K562DDX47
CREG1ENSG00000143162.77139.616105728.455000.317604.964203.73850K562DKC1
CREG1ENSG00000143162.71947.818501504.262100.372703.157501.72000K562DNAJC21
CREG1ENSG00000143162.74865.572103528.458900.4635010.099208.85680K562EIF2S2
CREG1ENSG00000143162.72452.861701422.897900.785504.719203.36770K562EIF3A
CREG1ENSG00000143162.73185.382502492.140100.354002.561801.56900K562EIF3D
CREG1ENSG00000143162.72188.511002898.66670-0.405404.328103.30220K562EIF4A3
CREG1ENSG00000143162.74503.074003703.457100.281902.476401.67560K562FIP1L1
CREG1ENSG00000143162.73406.105202499.073000.446604.156202.73320K562FKBP4
CREG1ENSG00000143162.77012.266803784.142100.8898018.8502016.54510K562FMR1
CREG1ENSG00000143162.74935.421603207.524400.621608.029006.38440K562FTO
CREG1ENSG00000143162.74224.950103126.954700.434103.019802.27500K562G3BP2
CREG1ENSG00000143162.77708.128704702.081500.7130015.8104013.96810K562GRSF1
CREG1ENSG00000143162.71989.396003525.84470-0.8256019.0078016.56020K562HNRNPA1
CREG1ENSG00000143162.73389.922504204.09190-0.310503.257202.10050K562HNRNPL
CREG1ENSG00000143162.78825.794605020.859900.8137016.5070014.67260K562HSPD1
CREG1ENSG00000143162.72969.752003822.61920-0.364203.758702.32610K562IGF2BP3
CREG1ENSG00000143162.74577.536503031.978900.594205.275403.93280K562KRR1
CREG1ENSG00000143162.73252.841503950.60060-0.280402.234101.47450K562MAGOH
CREG1ENSG00000143162.73252.841203942.81030-0.277502.556401.67280K562MATR3
CREG1ENSG00000143162.74500.008003465.720600.376704.351303.23580K562METAP2
CREG1ENSG00000143162.77969.116006482.144500.297802.765401.63610K562MSI2
CREG1ENSG00000143162.74805.161203178.385900.5962020.0230018.14130K562MTPAP
CREG1ENSG00000143162.74332.544303531.513300.294808.067706.88920K562NSUN2
CREG1ENSG00000143162.71885.643404144.62640-1.136208.569806.50180K562PABPN1
CREG1ENSG00000143162.74332.183903070.096400.496704.994503.87770K562PCBP3
CREG1ENSG00000143162.73178.532202354.814600.432606.355805.14680K562POLR2G
CREG1ENSG00000143162.73290.238302264.588600.538806.875305.69220K562PRPF8
CREG1ENSG00000143162.78761.986707057.197600.312104.321502.96280K562PUM1
CREG1ENSG00000143162.78959.974106915.072700.373707.926806.27860K562PUM2
CREG1ENSG00000143162.78446.825305279.567200.6779011.1965010.15360K562PUS1
CREG1ENSG00000143162.72508.921803681.12900-0.553106.150004.83260K562RBM22
CREG1ENSG00000143162.73267.273002307.065300.501904.869803.78410K562RPS19
CREG1ENSG00000143162.72402.767403014.54970-0.327202.579601.61520K562RPS3
CREG1ENSG00000143162.73553.358202315.803100.617605.609303.72020K562RRP9
CREG1ENSG00000143162.75661.587503484.641200.7001022.0045019.90500K562SF3A3
CREG1ENSG00000143162.74220.317603377.064100.321502.336401.45040K562SF3B1
CREG1ENSG00000143162.72636.045803251.82740-0.302903.406002.45440K562SF3B4
CREG1ENSG00000143162.71993.602101540.845000.371603.073801.73650K562SLBP
CREG1ENSG00000143162.72819.908103570.08460-0.340307.633106.16100K562SRPK2
CREG1ENSG00000143162.73801.883902799.368600.441506.303904.24980K562SSB
CREG1ENSG00000143162.76867.396705789.331200.246303.205601.59500K562SUCLG1
CREG1ENSG00000143162.73213.017402362.015000.443806.647205.36580K562SYNCRIP
CREG1ENSG00000143162.72506.809403808.24900-0.603307.060005.87850K562TARDBP
CREG1ENSG00000143162.72484.062703673.39250-0.564407.380705.93960K562TIA1
CREG1ENSG00000143162.72865.758903603.84610-0.330603.054201.89870K562TRA2A
CREG1ENSG00000143162.72073.551503031.42270-0.547905.355603.73250K562U2AF1
CREG1ENSG00000143162.75445.260907480.72740-0.458206.724804.62900K562UBE2L3
CREG1ENSG00000143162.73374.923002320.935100.540005.765004.24460K562UCHL5
CREG1ENSG00000143162.76742.239003744.535200.8483042.1364039.75810K562UPF1
CREG1ENSG00000143162.74736.788503204.085800.563909.754008.07140K562WDR3
CREG1ENSG00000143162.73852.926703331.841000.209503.133402.23530K562WDR43
CREG1ENSG00000143162.78162.238206169.733400.403705.321703.52980K562WRN
CREG1ENSG00000143162.77274.244005866.822600.310103.062802.15050K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CREG1 is not available on ENCORE database.





3 RBPs can affect the splicing of CREG1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXECREG1ENSG00000143162.7chr1-1675153371675155221675172381675173581675102491675115381675226241675230040.119000.000010.000371includedK562TARDBP
MXECREG1ENSG00000143162.7chr1-1675153371675155221675172381675173581675102491675115381675226241675230040.093000.000330.021371includedK562TIA1
MXECREG1ENSG00000143162.7chr1-1675153371675155221675172381675173581675102491675115381675226241675230040.087000.000510.028541includedK562IGF2BP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CREG1 is not avaliable on ENCORE database.