VMP1

General Information

Gene Name       : VMP1
Gene ID             : ENSG00000062716.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: VMP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VMP1ENSG00000062716.1296.4382.4389.43ENCSR000AEF
HepG2VMP1ENSG00000062716.1264.66123.0993.88ENCSR985KAT
K562VMP1ENSG00000062716.1289.5498.5094.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VMP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • VMP1 RNA is bound by 35 proteins.  







eCLIP assay for VMP1 is not avaliable on ENCORE database.





35 proteins are bound to VMP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr175791819057918223+3'-UTR5.0169029.79994HepG2DROSHA
chr175780878157808869+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.601258.10636K562DDX3X
chr175784243257842502+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.635406.25299K562ZNF622
chr175791559657915735+3'-UTR,CDS,intron-Proximal3.7456428.40416K562U2AF1
chr175791564757915675+3'-UTR,CDS,intron-Proximal4.0861644.99255HepG2U2AF1
chr175785111357851148+3'-UTR,CDS,intron-Distal,intron-Proximal3.756737.40563HepG2PPIG
chr175791838657918433+3'-UTR3.2373417.34418K562KHSRP
chr175788906557889138+3'-UTR,CDS3.323465.69612K562SND1
chr175788615657886196+3'-UTR,CDS,intron-Proximal4.113156.46645HepG2SND1
chr175789510157895134+3'-UTR,CDS3.968045.23222HepG2SND1
chr175791709957917164+3'-UTR,CDS,intron-Proximal3.197399.54630K562GPKOW
chr175788914257889182+3'-UTR,CDS,intron-Proximal5.496514.68690HepG2PRPF8
chr175791565557915668+3'-UTR,CDS,intron-Proximal4.59507400.00000HepG2U2AF2
chr175791836957918401+3'-UTR5.0334744.35091HepG2DROSHA
chr175791714957917219+3'-UTR,CDS3.0058017.96015HepG2BCLAF1
chr175791837557918383+3'-UTR5.4115840.86624HepG2DGCR8
chr175791833357918340+3'-UTR4.7356716.85944HepG2DROSHA
chr175791836757918430+3'-UTR4.0146463.68715K562DROSHA
chr175780878157808797+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.313173.87702HepG2NCBP2
chr175791569257915741+3'-UTR,CDS3.133587.32014K562U2AF2
chr175791568857915702+3'-UTR,CDS3.7447819.12688HepG2U2AF1
chr175791836957918386+3'-UTR3.7053721.80998K562KHSRP
chr175791573857915829+3'-UTR,CDS,intron-Proximal3.1818027.43597K562PRPF8
chr175785106057851128+3'-UTR,CDS,intron-Distal,intron-Proximal5.230166.90654K562SF3B4
chr175791825257918291+3'-UTR5.5347536.05833HepG2DROSHA
chr175784247857842500+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.913074.95361HepG2SND1
chr175791840457918418+3'-UTR4.5167942.68639HepG2DROSHA
chr175791838357918425+3'-UTR5.1936378.56767HepG2DGCR8
chr175785111257851150+3'-UTR,CDS,intron-Distal,intron-Proximal3.2419511.44176HepG2BCLAF1
chr175791827257918310+3'-UTR3.0556017.23290K562KHSRP
chr175788913957889193+3'-UTR,CDS,intron-Proximal5.135686.83278K562PRPF8
chr175785110157851151+3'-UTR,CDS,intron-Distal,intron-Proximal4.672656.36546K562BUD13
chr175791831057918348+3'-UTR3.4875519.69193K562KHSRP
chr175791566857915690+3'-UTR,CDS,intron-Proximal4.2264285.55238HepG2U2AF2
chr175791564057915692+3'-UTR,CDS,intron-Proximal3.9623233.05201K562U2AF2
chr175791570257915755+3'-UTR,CDS3.1587813.89637HepG2U2AF1
chr175791808757918110+3'-UTR4.3402823.93700HepG2DROSHA
chr175791711157917160+3'-UTR,CDS,intron-Proximal3.170774.90816K562U2AF1
chr175791824757918276+3'-UTR4.0856936.37475HepG2DGCR8
chr175791811057918152+3'-UTR4.5660926.30011HepG2DROSHA
chr175791829157918314+3'-UTR5.0072827.32588HepG2DROSHA
chr175784233057842347+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.843435.58116K562SND1
chr175791806457918087+3'-UTR3.2365114.11259HepG2DROSHA
chr175791574957915811+3'-UTR,CDS,intron-Proximal6.0497146.83141HepG2PRPF8
chr175784237957842500+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.5479110.15896K562SND1
chr175791773557917803+3'-UTR3.4297641.87044HepG2PCBP2
chr175791810457918138+3'-UTR4.9754848.01517HepG2DGCR8
chr175791712657917169+3'-UTR,CDS,intron-Proximal5.1702617.32429K562U2AF2
chr175789510657895134+3'-UTR,CDS3.313683.49838K562SND1
chr175791567557915688+3'-UTR,CDS3.5972717.96417HepG2U2AF1
chr175791834857918369+3'-UTR3.8291319.86918K562KHSRP
chr175791775557917799+3'-UTR3.8904338.99076HepG2HNRNPK
chr175791773657917786+3'-UTR3.1507117.52172HepG2FAM120A
chr175791844457918464+3'-UTR,polyA_site5.0309729.94596HepG2DROSHA
chr175791717757917249+3'-UTR,CDS3.245029.23830HepG2TIA1
chr175791815257918190+3'-UTR4.4178827.65886HepG2DROSHA
chr175791707857917166+3'-UTR,CDS,intron-Proximal4.9179013.85754HepG2AQR
chr175785115957851246+3'-UTR,CDS,intron-Distal3.797036.23335HepG2GRWD1
chr175791574657915828+3'-UTR,CDS,intron-Proximal4.5090913.64756HepG2AQR
chr175781623057816309+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9670111.92869K562SND1
chr175784243357842500+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.4136315.00548HepG2BCLAF1
chr175780877957808802+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.554084.65365HepG2GRWD1
chr175791798557918038+3'-UTR3.3239634.45170HepG2DROSHA
chr175785111457851138+3'-UTR,CDS,intron-Distal,intron-Proximal3.817455.82787HepG2SND1
chr175791841857918440+3'-UTR4.6935032.80972HepG2DROSHA
chr175791833257918435+3'-UTR3.9126551.05626HepG2U2AF2
chr175791773657917755+3'-UTR4.0221331.57807HepG2HNRNPK
chr175784238657842463+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.428768.33615HepG2SND1
chr175791799357918030+3'-UTR3.8612530.43970HepG2DGCR8
chr175785113857851203+3'-UTR,CDS,intron-Distal3.9156510.06255HepG2SND1
chr175785111457851178+3'-UTR,CDS,intron-Distal,intron-Proximal3.837748.62767K562SND1
chr175791569057915737+3'-UTR,CDS3.4913136.96791HepG2U2AF2
chr175791844357918489+3'-UTR,polyA_site3.6285325.70752HepG2U2AF2
chr175791712657917184+3'-UTR,CDS,intron-Proximal4.55648400.00000HepG2U2AF2
chr175791575157915810+3'-UTR,CDS,intron-Proximal3.7355130.01374HepG2EFTUD2
chr175781626357816309+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.674947.86497HepG2SND1
chr175791822357918249+3'-UTR6.1356229.65176HepG2DROSHA
chr175791572757915749+3'-UTR,CDS3.9686828.05569HepG2PRPF8
chr175791835857918426+3'-UTR3.454665.20622HepG2TIA1
chr175780887457808883+5'-UTR,CDS,intron-Distal3.004343.33043HepG2BCLAF1
chr175781274757812836+5'-UTR,CDS,intron-Distal,intron-Proximal5.049976.67793HepG2ZNF800
chr175781269657812748+5'-UTR,CDS,intron-Distal,intron-Proximal3.354926.39282HepG2GRWD1
chr175781279157812835+5'-UTR,CDS,intron-Distal,intron-Proximal3.7852810.26109HepG2BCLAF1
chr175778503257785115+5'-UTR,intron-Proximal3.171149.35870HepG2NCBP2
chr175781270557812822+5'-UTR,CDS,intron-Distal3.749563.48077HepG2UCHL5
chr175781269857812735+5'-UTR,CDS,intron-Distal,intron-Proximal3.690957.33138HepG2BCLAF1
chr175778502257785112+5'-UTR,intron-Proximal3.9191419.58341HepG2DDX3X
chr175781273557812791+5'-UTR,CDS,intron-Distal4.4488210.24470HepG2BCLAF1
chr175780886457808884+5'-UTR,CDS,intron-Distal,intron-Proximal3.201565.54854HepG2GRWD1
chr175781273757812824+5'-UTR,CDS,intron-Distal4.332575.40397K562LIN28B
chr175778507357785110+5'-UTR,intron-Proximal3.498565.28199HepG2GRWD1
chr175778502257785111+5'-UTR,intron-Proximal4.5882216.40314K562DDX3X
chr175785120357851248+CDS,intron-Distal,intron-Proximal4.985477.82546HepG2SND1
chr175785120357851246+CDS,intron-Distal3.541783.61371K562SND1
chr175785118857851250+CDS,intron-Distal,intron-Proximal4.372623.87582K562ZNF622
chr175791530057915339+intron-Distal4.458843.84812HepG2DDX52
chr175791537457915394+intron-Distal3.5523823.48560HepG2HNRNPC
chr175788087457880958+intron-Distal3.720303.26999K562KHSRP
chr175791529657915366+intron-Distal3.4368129.38611HepG2NCBP2
chr175791532557915356+intron-Distal4.1844543.61208HepG2HNRNPC
chr175791530157915372+intron-Distal3.6112711.74367HepG2XRCC6
chr175788272957882840+intron-Distal4.199063.89294K562KHSRP
chr175789273657892816+intron-Distal4.390333.45317HepG2HNRNPL
chr175791577657915889+intron-Distal,intron-Proximal3.6254714.88911K562RBM22
chr175791578657915950+intron-Distal,intron-Proximal3.5199739.65752K562EFTUD2
chr175791522557915280+intron-Distal,intron-Proximal3.529867.89739HepG2NCBP2
chr175782396757824046+intron-Distal4.172843.05187HepG2QKI
chr175785675857856812+intron-Distal4.082983.63454HepG2SUGP2
chr175791539457915410+intron-Distal3.4574316.97074HepG2HNRNPC
chr175791552857915596+intron-Distal,intron-Proximal3.4275728.95339HepG2HNRNPC
chr175788932757889422+intron-Distal5.133077.45191HepG2PTBP1
chr175788933057889415+intron-Distal5.9079612.78773K562PTBP1
chr175791537057915403+intron-Distal3.3386713.65427HepG2U2AF2
chr175791529657915320+intron-Distal5.127578.66156K562HNRNPC
chr175786068657860765+intron-Distal3.065883.48890K562KHSRP
chr175789743257897658+intron-Distal3.191924.26712HepG2PTBP1
chr175791581057915873+intron-Distal,intron-Proximal3.5665119.94439HepG2EFTUD2
chr175786147057861569+intron-Distal4.738208.85086K562EIF4G2
chr175786184057861883+intron-Distal4.100603.18981K562PTBP1
chr175780618557806325+intron-Distal4.752266.37635HepG2HNRNPL
chr175791530757915346+intron-Distal4.523045.12844K562U2AF1
chr175791582957915908+intron-Distal,intron-Proximal3.8359523.46471K562PRPF8
chr175786175657861843+intron-Distal3.513907.86825HepG2PCBP2
chr175791529757915325+intron-Distal4.4753752.94173HepG2HNRNPC
chr175791532057915357+intron-Distal5.286769.63923K562HNRNPC
chr175791575857915860+intron-Distal,intron-Proximal4.3457518.74108K562AQR
chr175791634357916403+intron-Distal3.909663.21749K562HNRNPC
chr175791710057917126+intron-Proximal4.7637173.56141HepG2U2AF2
chr175791560357915623+intron-Proximal4.3298613.20212K562U2AF2
chr175791563257915653+intron-Proximal3.3515921.91628HepG2TIAL1
chr175791560657915647+intron-Proximal4.3140938.25542HepG2U2AF1
chr175791559957915627+intron-Proximal4.6761616.75639K562TIA1
chr175791581557915850+intron-Proximal3.413819.13231HepG2RBM22
chr175791576757915816+intron-Proximal5.9844623.61430HepG2TIAL1
chr175791559257915603+intron-Proximal3.496643.49021K562U2AF2
chr175791562157915632+intron-Proximal4.0761226.33066HepG2TIAL1
chr175791562757915644+intron-Proximal4.0455514.16132K562TIA1
chr175791558957915620+intron-Proximal4.2365857.66613HepG2U2AF2
chr175791705757917114+intron-Proximal5.109233.31322HepG2SF3B4
chr175791577257915815+intron-Proximal4.1395324.83253HepG2RBM22
chr175791577257915837+intron-Proximal3.9995822.06228K562TIA1
chr175791582157915833+intron-Proximal4.078729.91476HepG2PRPF8
chr175791576757915827+intron-Proximal3.5624810.33610HepG2TIA1
chr175791709857917126+intron-Proximal5.6564911.37257K562U2AF2
chr175791562357915640+intron-Proximal4.0075823.03557K562U2AF2
chr175791562057915642+intron-Proximal4.61774400.00000HepG2U2AF2
chr175791559257915620+intron-Proximal3.9846320.45588HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VMP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VMP1 is not available on ENCORE database.

  • 136 RBPs can affect the levels of VMP1.  








The Knockdown/knockout RNA-Seq assay for VMP1 is not available on ENCORE database.





136 RBPs can affect the gene expression of VMP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VMP1ENSG00000062716.65420.951202803.518900.9512022.7066020.17110HepG2AATF
VMP1ENSG00000062716.63530.273804459.85910-0.337202.618201.70210HepG2ABCF1
VMP1ENSG00000062716.66075.509203912.878800.6347023.3049021.93060HepG2ACO1
VMP1ENSG00000062716.62484.402703773.07330-0.602807.935606.35470HepG2ADAR
VMP1ENSG00000062716.66787.536905172.953100.391803.058402.50230HepG2AKAP1
VMP1ENSG00000062716.67160.368605265.778200.443304.047802.79360HepG2AKAP8
VMP1ENSG00000062716.66683.601205164.830900.371808.304207.22190HepG2AUH
VMP1ENSG00000062716.65445.522003321.377000.713209.563307.76240HepG2BCCIP
VMP1ENSG00000062716.65474.621803970.867800.463203.477602.81540HepG2BOP1
VMP1ENSG00000062716.64159.472503341.749500.315703.349002.00510HepG2BUD13
VMP1ENSG00000062716.66873.605704095.204000.7470019.5117017.80910HepG2CALR
VMP1ENSG00000062716.63289.569303912.61040-0.250202.331701.71300HepG2CKAP4
VMP1ENSG00000062716.65725.150903673.200300.6402012.5159010.37060HepG2CPSF7
VMP1ENSG00000062716.63341.785003869.19350-0.211402.297501.37050HepG2YBX3
VMP1ENSG00000062716.64114.863602869.974200.519703.926502.20750HepG2CSTF2T
VMP1ENSG00000062716.69343.155805213.248600.8416035.4203033.65150HepG2CELF1
VMP1ENSG00000062716.62589.288403619.11980-0.483106.345305.16120HepG2DDX19B
VMP1ENSG00000062716.66614.760603265.431301.0183018.3378016.60590HepG2DDX55
VMP1ENSG00000062716.66008.303904139.835600.537302.680701.72080HepG2DDX59
VMP1ENSG00000062716.68627.160304256.429801.019107.597406.61910HepG2DDX6
VMP1ENSG00000062716.62777.868903743.71520-0.430505.041704.17660HepG2DKC1
VMP1ENSG00000062716.64819.991602848.582300.758708.302306.44930HepG2AGO1
VMP1ENSG00000062716.65161.468204092.236500.334802.678502.09550HepG2EIF2S1
VMP1ENSG00000062716.64426.895202864.972700.627708.433306.93580HepG2EIF3D
VMP1ENSG00000062716.61755.911402921.42550-0.7345015.2639013.15320HepG2EIF3G
VMP1ENSG00000062716.69095.217804403.000101.046505.141304.22250HepG2EIF4B
VMP1ENSG00000062716.63158.883703863.62610-0.290502.336301.32870HepG2ESF1
VMP1ENSG00000062716.65071.516305929.89540-0.225603.040502.41480HepG2ETF1
VMP1ENSG00000062716.63964.940402948.255800.427303.795402.48630HepG2FASTKD2
VMP1ENSG00000062716.67141.027104503.469800.665008.220906.97350HepG2FIP1L1
VMP1ENSG00000062716.63671.095102774.951300.403604.777903.76070HepG2FUBP3
VMP1ENSG00000062716.66404.066104232.714500.597306.862005.83390HepG2G3BP1
VMP1ENSG00000062716.63540.622504493.13920-0.343702.885001.97060HepG2G3BP2
VMP1ENSG00000062716.64727.504703755.738200.331902.640301.64560HepG2GNB2L1
VMP1ENSG00000062716.65064.862007038.88850-0.474803.127801.93970HepG2GRSF1
VMP1ENSG00000062716.65302.356303625.704200.548303.653801.85520HepG2GTF2F1
VMP1ENSG00000062716.65993.681103686.134400.701204.731502.87240HepG2HLTF
VMP1ENSG00000062716.62625.885203835.77580-0.546708.352407.31830HepG2HNRNPA1
VMP1ENSG00000062716.67771.815905151.678800.5931019.7661017.72570HepG2HNRNPA2B1
VMP1ENSG00000062716.63573.931704266.53330-0.255602.206901.58010HepG2HNRNPC
VMP1ENSG00000062716.67907.113604285.238900.8837018.9289017.25100HepG2HNRNPK
VMP1ENSG00000062716.66668.329605106.322200.3849012.8793011.52240HepG2HNRNPL
VMP1ENSG00000062716.63996.703203107.429800.363004.559903.37210HepG2HNRNPM
VMP1ENSG00000062716.63797.330104238.32980-0.158501.823301.32170HepG2HNRNPU
VMP1ENSG00000062716.63436.085504721.31390-0.458404.403103.50710HepG2IGF2BP1
VMP1ENSG00000062716.65244.570004302.578800.285502.108001.50980HepG2IGF2BP2
VMP1ENSG00000062716.65011.089704329.323500.210904.364803.46370HepG2ILF2
VMP1ENSG00000062716.65004.946707244.16090-0.533504.654303.05650HepG2KHDRBS1
VMP1ENSG00000062716.64863.706003678.728700.402705.221203.66690HepG2LARP7
VMP1ENSG00000062716.63637.037604564.08770-0.327602.504301.87870HepG2MAGOH
VMP1ENSG00000062716.65034.927202998.561500.747606.837305.25600HepG2METAP2
VMP1ENSG00000062716.67388.963503645.177701.0193030.7577028.56480HepG2MSI2
VMP1ENSG00000062716.64624.066503060.782400.595208.440906.37270HepG2NAA15
VMP1ENSG00000062716.68238.862505558.517300.5676013.1557011.54780HepG2NOL12
VMP1ENSG00000062716.66174.426504184.193600.561305.941704.89530HepG2PABPC4
VMP1ENSG00000062716.66334.146104195.293600.5943019.4433017.58570HepG2PARN
VMP1ENSG00000062716.64686.003204199.078200.158201.915001.39470HepG2PCBP1
VMP1ENSG00000062716.63087.488103780.26170-0.292103.979403.11200HepG2PPIL4
VMP1ENSG00000062716.62598.114603034.64980-0.224102.802702.02530HepG2PRPF4
VMP1ENSG00000062716.66863.501204272.799600.6837015.8019014.69940HepG2PTBP1
VMP1ENSG00000062716.63728.175505306.06360-0.509207.873606.93580HepG2PUF60
VMP1ENSG00000062716.66159.882305632.588200.129001.811201.30880HepG2PUM1
VMP1ENSG00000062716.610702.383103516.452301.6056021.6172019.82780HepG2RAVER1
VMP1ENSG00000062716.68836.208304895.051500.8520026.9185024.72050HepG2RBM15
VMP1ENSG00000062716.67389.445204956.299800.5761015.9477014.91200HepG2RBM22
VMP1ENSG00000062716.66553.281605163.957400.343603.998103.20170HepG2RPLP0
VMP1ENSG00000062716.63894.458302787.605200.482307.253706.31370HepG2RPS19
VMP1ENSG00000062716.64496.314907634.25120-0.763708.016106.67470HepG2RPS3A
VMP1ENSG00000062716.66293.388304176.003900.591608.923407.00020HepG2RPS5
VMP1ENSG00000062716.64851.412202492.845100.9605016.4784014.85000HepG2RRP9
VMP1ENSG00000062716.64926.326907189.01550-0.545304.860103.12530HepG2SART3
VMP1ENSG00000062716.64719.183407253.03720-0.620004.356302.42860HepG2SBDS
VMP1ENSG00000062716.63576.492502798.016600.354003.263602.23920HepG2SERBP1
VMP1ENSG00000062716.62848.557703773.24020-0.405602.278501.66570HepG2SF3A3
VMP1ENSG00000062716.66413.847304448.391600.5278016.6454015.38030HepG2SF3B4
VMP1ENSG00000062716.64100.213405087.62100-0.311307.689206.60890HepG2SLBP
VMP1ENSG00000062716.65167.792504401.709300.231405.054704.22840HepG2SMN1
VMP1ENSG00000062716.65244.511403582.395100.549804.232603.02960HepG2SMNDC1
VMP1ENSG00000062716.610114.782704344.083201.2192014.8320013.04460HepG2SNRNP70
VMP1ENSG00000062716.66647.155505597.966200.247704.804804.19640HepG2SRFBP1
VMP1ENSG00000062716.67079.160503777.554800.9060050.5570048.77840HepG2SRSF9
VMP1ENSG00000062716.63975.894004860.37390-0.289805.393604.72450HepG2SSB
VMP1ENSG00000062716.64158.014203008.351800.466803.622802.22180HepG2STAU1
VMP1ENSG00000062716.66181.589203286.053800.911509.610207.45380HepG2SUB1
VMP1ENSG00000062716.66867.006405958.135400.204703.665802.96750HepG2SUCLG1
VMP1ENSG00000062716.64364.259903041.270500.521008.182406.62950HepG2SUPT6H
VMP1ENSG00000062716.66687.736703250.957601.0406020.3662018.83280HepG2SUPV3L1
VMP1ENSG00000062716.63144.946705610.88710-0.835204.582503.23360HepG2TBRG4
VMP1ENSG00000062716.64390.264802179.168101.0104018.6563016.57660HepG2TFIP11
VMP1ENSG00000062716.65531.731203834.858500.528502.870202.02010HepG2TIA1
VMP1ENSG00000062716.62655.135504118.54720-0.6334013.8721012.90060HepG2TIAL1
VMP1ENSG00000062716.64226.881505183.74620-0.294403.263602.30700HepG2TUFM
VMP1ENSG00000062716.68123.050605486.878800.565906.438305.12870HepG2UBE2L3
VMP1ENSG00000062716.64491.721201920.625901.2256028.4380026.14370HepG2UCHL5
VMP1ENSG00000062716.65088.602003346.283200.6046021.9789020.38030HepG2UPF1
VMP1ENSG00000062716.66487.576003230.711001.0057058.9861056.78210HepG2UTP3
VMP1ENSG00000062716.64609.224006837.94020-0.569004.484903.07640HepG2XPO5
VMP1ENSG00000062716.65802.171303456.919200.747007.026205.05730HepG2XRCC5
VMP1ENSG00000062716.62177.807603200.20300-0.555304.020603.15510HepG2XRN2
VMP1ENSG00000062716.63337.440102994.808100.156202.010401.42360HepG2ZC3H8
VMP1ENSG00000062716.67415.287903680.276601.0106082.5950080.70350HepG2ZNF622
VMP1ENSG00000062716.62986.625001701.548900.8116016.0159013.30620K562AARS
VMP1ENSG00000062716.63805.251103314.720600.199002.556202.00620K562AGGF1
VMP1ENSG00000062716.61190.113101660.49140-0.480507.638005.13300K562AKAP1
VMP1ENSG00000062716.62895.047303738.53910-0.368903.721702.25660K562APOBEC3C
VMP1ENSG00000062716.62211.553503670.43980-0.7309012.1362011.03410K562AQR
VMP1ENSG00000062716.63454.424604346.56720-0.331403.633101.36250K562AUH
VMP1ENSG00000062716.61799.372702139.31340-0.249703.189802.16110K562BCLAF1
VMP1ENSG00000062716.64889.667103961.336500.303603.648202.26800K562CCDC124
VMP1ENSG00000062716.64298.491903173.199700.437809.676207.60600K562CPEB4
VMP1ENSG00000062716.63108.103601892.551300.715603.784901.54220K562DAZAP1
VMP1ENSG00000062716.61722.867702151.58560-0.320603.919902.46420K562DDX21
VMP1ENSG00000062716.62636.913703283.30610-0.316305.177604.32480K562DDX47
VMP1ENSG00000062716.64846.952003711.598500.384905.840004.50460K562DKC1
VMP1ENSG00000062716.61034.645001620.98940-0.647704.320003.16180K562EFTUD2
VMP1ENSG00000062716.61393.859801848.10890-0.407006.222804.38100K562EIF2S1
VMP1ENSG00000062716.63332.598602283.145900.5455012.1140010.76280K562EIF2S2
VMP1ENSG00000062716.61266.385501735.93440-0.455002.688701.66890K562EIF3D
VMP1ENSG00000062716.61030.344801989.41830-0.9492010.253608.71590K562EIF3G
VMP1ENSG00000062716.61072.610901757.81570-0.7127010.530108.90740K562EIF4A3
VMP1ENSG00000062716.61316.177301583.01330-0.266302.463901.39570K562EIF4B
VMP1ENSG00000062716.62780.113404236.91050-0.6079016.2875014.13690K562EIF4G2
VMP1ENSG00000062716.61405.492901835.86640-0.385404.172802.57680K562EXOSC5
VMP1ENSG00000062716.62300.195801442.633300.673004.946802.66490K562FAM120A
VMP1ENSG00000062716.63230.802902457.581400.394604.560602.68660K562G3BP1
VMP1ENSG00000062716.61637.589502112.93610-0.367704.789503.30590K562GLRX3
VMP1ENSG00000062716.61385.082701862.41000-0.427204.096503.38540K562HNRNPC
VMP1ENSG00000062716.65558.687602567.470001.1143024.4163021.04380K562HNRNPK
VMP1ENSG00000062716.63330.931001872.896100.8306011.796109.53920K562HNRNPM
VMP1ENSG00000062716.61683.869002384.52350-0.501908.706507.13330K562HNRNPU
VMP1ENSG00000062716.64913.377903087.161800.6703010.692609.15440K562HSPD1
VMP1ENSG00000062716.6761.244901140.12670-0.582805.445303.35710K562ILF3
VMP1ENSG00000062716.62082.547301660.100900.327003.052201.42720K562LSM11
VMP1ENSG00000062716.62084.921302696.12920-0.370904.241303.07800K562MATR3
VMP1ENSG00000062716.63255.570404516.08990-0.472205.626004.01700K562MSI2
VMP1ENSG00000062716.61842.041702468.17610-0.4221011.063709.70950K562NSUN2
VMP1ENSG00000062716.62207.614703210.83740-0.540503.130101.80870K562PABPC1
VMP1ENSG00000062716.61354.923202284.09500-0.753402.382501.47760K562PABPN1
VMP1ENSG00000062716.63323.130302359.478700.494003.774301.92460K562PKM
VMP1ENSG00000062716.62272.862901669.775400.444802.579001.71190K562PSIP1
VMP1ENSG00000062716.64364.649903420.698400.351503.433302.83780K562PUS1
VMP1ENSG00000062716.63139.787202132.927800.557703.495601.86430K562RAVER1
VMP1ENSG00000062716.62907.625403332.83920-0.196901.900101.39260K562RBM15
VMP1ENSG00000062716.61579.725602120.49330-0.424705.023803.15540K562RBM25
VMP1ENSG00000062716.62729.969501523.114900.841807.600405.95360K562RCC2
VMP1ENSG00000062716.63590.606402648.675600.438904.436803.01670K562NELFE
VMP1ENSG00000062716.61918.645703044.48930-0.666104.502702.45820K562SBDS
VMP1ENSG00000062716.61853.562502435.61600-0.394006.145204.96920K562SF3A3
VMP1ENSG00000062716.61848.859001443.907300.356603.215902.08920K562SRFBP1
VMP1ENSG00000062716.62178.920402495.35520-0.195602.458701.57020K562SRPK2
VMP1ENSG00000062716.61872.609802573.02940-0.458406.145405.10060K562SRSF1
VMP1ENSG00000062716.61403.424101754.77440-0.322302.899401.81360K562SRSF4
VMP1ENSG00000062716.61616.582001919.92180-0.248102.446701.34980K562SRSF7
VMP1ENSG00000062716.63070.790104033.39050-0.393404.859602.93040K562SUCLG1
VMP1ENSG00000062716.61067.384901527.71310-0.517302.445001.49450K562SUPV3L1
VMP1ENSG00000062716.61592.232602604.17110-0.7098010.141208.65020K562TARDBP
VMP1ENSG00000062716.62021.800702511.99150-0.313203.199502.30990K562TIA1
VMP1ENSG00000062716.62235.230703011.71880-0.430203.473301.34440K562TUFM
VMP1ENSG00000062716.61100.847501616.67180-0.554403.574302.40510K562UCHL5
VMP1ENSG00000062716.63236.030802617.067700.306205.375304.41030K562UPF1
VMP1ENSG00000062716.62828.276504135.08470-0.548008.059406.46710K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VMP1 is not available on ENCORE database.





27 RBPs can affect the splicing of VMP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEVMP1ENSG00000062716.6chr17+578148135781490457812698578128345781619757816308-0.075000.000900.01869excludedHepG2U2AF1
SEVMP1ENSG00000062716.6chr17+578148135781490457812698578128345784233157842499-0.062000.003370.07088excludedHepG2HNRNPK
SEVMP1ENSG00000062716.6chr17+578148135781490457812698578128345784233157842499-0.320000.000010.00017excludedHepG2U2AF2
SEVMP1ENSG00000062716.6chr17+578950725789513457889030578891475791565557915758-0.073000.000030.00063excludedK562AQR
SEVMP1ENSG00000062716.6chr17+578161975781630857812698578128345784233157842499-0.060000.002600.02725excludedK562AQR
SEVMP1ENSG00000062716.6chr17+578126985781283457785025577851095781481357814904-0.216000.001110.07852excludedK562SUPV3L1
SEVMP1ENSG00000062716.6chr17+578148135781490457812698578128345781619757816308-0.078000.005590.06779excludedK562PUS1
SEVMP1ENSG00000062716.6chr17+578423105784249957816197578163085785111457851246-0.078000.004590.09873excludedHepG2SF3A3
SEVMP1ENSG00000062716.6chr17+578148135781490457812698578128345781619757816308-0.186000.000080.00226excludedK562U2AF2
SEVMP1ENSG00000062716.6chr17+5791137257911411578950725789513457915655579157580.056000.001330.04826includedHepG2HNRNPC
RIVMP1ENSG00000062716.6chr17+579155705791575857915570579155735791567257915758-0.150000.001750.09540excludedK562ZC3H8
MXEVMP1ENSG00000062716.6chr17+57816197578163085784233157842499578126985781283457851114578512460.058000.000270.007481includedHepG2U2AF1
MXEVMP1ENSG00000062716.6chr17+5788903057889147578950725789513457886156578862375791565557915758-0.175000.000000.000002includedHepG2FTO
MXEVMP1ENSG00000062716.6chr17+5781619757816308578423315784249957814813578149045785111457851246-0.122000.005280.056892includedK562DROSHA
MXEVMP1ENSG00000062716.6chr17+57816197578163085784233157842499578126985781283457851114578512460.074000.001150.022581includedK562PUS1
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.141000.000020.001481includedK562XRN2
MXEVMP1ENSG00000062716.6chr17+5781481357814904578161975781630857812698578128345784233157842499-0.154000.001300.040132includedK562XRN2
MXEVMP1ENSG00000062716.6chr17+5781481357814904578161975781630857812698578128345784233157842499-0.103000.001210.044522includedK562LIN28B
MXEVMP1ENSG00000062716.6chr17+57889009578891475789507257895134578861565788623757915655579157580.086000.000010.000141includedK562AQR
MXEVMP1ENSG00000062716.6chr17+57842331578424995785111457851246578126985781283457886156578862370.060000.002260.018451includedK562AQR
MXEVMP1ENSG00000062716.6chr17+57889030578891475789507257895134578511145785124657915655579157580.091000.000180.002041includedK562AQR
MXEVMP1ENSG00000062716.6chr17+57816197578163085784233157842499578148135781490457851114578512460.146000.001260.075331includedHepG2NOLC1
MXEVMP1ENSG00000062716.6chr17+57816197578163085784233157842499578126985781283457851114578512460.109000.000760.012631includedK562U2AF2
MXEVMP1ENSG00000062716.6chr17+5781481357814904578161975781630857812698578128345784233157842499-0.152000.000450.008362includedK562U2AF2
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.096000.000490.027881includedHepG2BCCIP
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.123000.000620.010791includedHepG2SFPQ
MXEVMP1ENSG00000062716.6chr17+57812698578128345781481357814904578087815780888357816197578163080.212000.000280.005851includedHepG2SFPQ
MXEVMP1ENSG00000062716.6chr17+5781619757816308578423315784249957814813578149045785111457851246-0.154000.000160.003842includedHepG2SFPQ
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.109000.000030.001551includedHepG2DDX55
MXEVMP1ENSG00000062716.6chr17+57812698578128345781481357814904578087815780888357816197578163080.081000.017930.085581includedHepG2U2AF2
MXEVMP1ENSG00000062716.6chr17+5781619757816308578423315784249957814813578149045785111457851246-0.092000.018250.086672includedHepG2U2AF2
MXEVMP1ENSG00000062716.6chr17+5781481357814904578161975781630857812698578128345784233157842499-0.089000.000010.000102includedHepG2U2AF2
MXEVMP1ENSG00000062716.6chr17+5780878157808883578126985781283457785008577851095784233157842499-0.053000.000120.001322includedHepG2U2AF2
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.158000.000010.002051includedK562NCBP2
MXEVMP1ENSG00000062716.6chr17+5780878157808883578126985781283457784825577851095781481357814904-0.123000.000060.044222includedK562CSTF2T
MXEVMP1ENSG00000062716.6chr17+57851114578512465788615657886237578423315784249957889030578891470.135000.000120.006101includedHepG2PCBP1
MXEVMP1ENSG00000062716.6chr17+5788903057889147578950725789513457886156578862375791565557915758-0.163000.000020.001512includedHepG2PCBP1
MXEVMP1ENSG00000062716.6chr17+57812698578128345781481357814904578087815780888357816197578163080.197000.000030.002431includedHepG2RBFOX2
MXEVMP1ENSG00000062716.6chr17+57842331578424995785111457851246578161975781630857886156578862370.154000.000030.005251includedHepG2DROSHA
MXEVMP1ENSG00000062716.6chr17+57816197578163085784233157842499578126985781283457851114578512460.101000.001950.058001includedK562TAF15
MXEVMP1ENSG00000062716.6chr17+5781269857812834578148135781490457808781578088835781619757816308-0.187000.000330.015972includedK562DDX55
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.102000.000090.005201includedHepG2SUPV3L1
MXEVMP1ENSG00000062716.6chr17+5789507257895134579156555791575857889030578891475791712857917467-0.107000.000050.003842includedHepG2HNRNPL
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.145000.000030.010061includedK562EWSR1
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.091000.004730.087701includedHepG2TIAL1
MXEVMP1ENSG00000062716.6chr17+5781481357814904578161975781630857812698578128345784233157842499-0.090000.005150.092742includedHepG2TIAL1
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.143000.000020.001191includedK562SUPV3L1
MXEVMP1ENSG00000062716.6chr17+57812698578128345781481357814904578087815780888357816197578163080.243000.001380.029161includedK562HNRNPUL1
MXEVMP1ENSG00000062716.6chr17+57808781578088835781269857812834577848255778510957814813578149040.137000.000050.006801includedK562SERBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for VMP1 is not avaliable on ENCORE database.