POLD1

General Information

Gene Name : POLD1
Gene ID : ENSG00000062822.13
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: POLD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	POLD1	ENSG00000062822.13	1.22	12.35	6.79	ENCSR000AEF
HepG2	POLD1	ENSG00000062822.13	59.71	10.23	34.97	ENCSR985KAT
K562	POLD1	ENSG00000062822.13	70.75	32.12	51.44	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for POLD1 is not avaliable on ENCORE database.

Proteins bound to RNA

POLD1 RNA is bound by 29 proteins.

CanvasJS.com

eCLIP assay for POLD1 is not avaliable on ENCORE database.

29 proteins are bound to POLD1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	50905402	50905505	+	CDS,intron-Proximal	3.66576	27.85375	K562	EFTUD2
chr19	50919257	50919547	+	intron-Distal	4.57604	22.15632	HepG2	DDX59
chr19	50912192	50912202	+	intron-Proximal	5.34233	21.24327	K562	AQR
chr19	50906853	50906922	+	CDS,intron-Proximal	6.84233	20.80778	K562	AQR
chr19	50912167	50912192	+	intron-Proximal	4.87841	18.21561	K562	AQR
chr19	50912352	50912417	+	CDS,intron-Proximal	6.52695	15.90046	K562	AQR
chr19	50912158	50912160	+	intron-Proximal	4.89502	14.41880	K562	AQR
chr19	50919603	50919669	+	CDS,intron-Proximal	3.98985	14.31466	K562	SF3B4
chr19	50910278	50910351	+	CDS	4.16477	14.09628	HepG2	PPIG
chr19	50919383	50919490	+	intron-Distal	5.05813	13.88387	K562	HNRNPK
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 139 entries

eCLIP assay for POLD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for POLD1 is not available on ENCORE database.
114 RBPs can affect the levels of POLD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for POLD1 is not available on ENCORE database.

114 RBPs can affect the gene expression of POLD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
POLD1	ENSG00000062822.8	1532.06480	4049.81070	-1.40240	37.94300	35.97880	K562	AQR
POLD1	ENSG00000062822.8	299.60880	742.19050	-1.30870	32.50470	31.16120	HepG2	ZNF622
POLD1	ENSG00000062822.8	374.71960	820.15680	-1.13010	25.28450	23.73170	HepG2	CKAP4
POLD1	ENSG00000062822.8	186.69840	937.47490	-2.32810	22.68320	21.48870	HepG2	RBM22
POLD1	ENSG00000062822.8	62.76680	398.79190	-2.66760	23.79150	21.07620	K562	G3BP2
POLD1	ENSG00000062822.8	5087.32890	2963.81920	0.77940	22.37970	20.87640	K562	AGGF1
POLD1	ENSG00000062822.8	155.39380	398.46210	-1.35850	18.82370	17.61890	HepG2	SRSF9
POLD1	ENSG00000062822.8	146.50690	424.28450	-1.53410	18.06830	16.62400	HepG2	RPLP0
POLD1	ENSG00000062822.8	179.17480	497.71560	-1.47400	17.09190	15.71780	HepG2	HNRNPLL
POLD1	ENSG00000062822.8	196.13070	501.20670	-1.35360	16.53330	15.24910	HepG2	BOP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 131 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for POLD1 is not available on ENCORE database.

22 RBPs can affect the splicing of POLD1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
A3SS	POLD1	ENSG00000062822.8	chr19	+	50905445	50905630	50905461	50905630	50905255	50905381	0.75000	0.00002	longer	HepG2	RBM22
A3SS	POLD1	ENSG00000062822.8	chr19	+	50912378	50912492	50912402	50912492	50912041	50912158	-0.17700	0.00000	shorter	K562	SRSF1
RI	POLD1	ENSG00000062822.8	chr19	+	50918980	50919785	50918980	50919083	50919652	50919785	0.13100	0.00001	included	K562	PUS1
RI	POLD1	ENSG00000062822.8	chr19	+	50905559	50905792	50905559	50905630	50905710	50905792	0.26400	0.00000	included	K562	PRPF8
RI	POLD1	ENSG00000062822.8	chr19	+	50905255	50905630	50905255	50905381	50905461	50905630	0.64500	0.00007	included	HepG2	RBM22
RI	POLD1	ENSG00000062822.8	chr19	+	50918980	50919785	50918980	50919083	50919652	50919785	0.43500	0.00004	included	HepG2	RBM22
RI	POLD1	ENSG00000062822.8	chr19	+	50905559	50905792	50905559	50905630	50905710	50905792	0.11300	0.00001	included	K562	AQR
RI	POLD1	ENSG00000062822.8	chr19	+	50918980	50919785	50918980	50919083	50919652	50919785	0.14200	0.00000	included	K562	AQR
RI	POLD1	ENSG00000062822.8	chr19	+	50905559	50905792	50905559	50905630	50905710	50905792	0.07700	0.00012	included	K562	FXR1
RI	POLD1	ENSG00000062822.8	chr19	+	50905255	50905630	50905255	50905381	50905461	50905630	0.16600	0.00018	included	K562	FXR1

Showing 1 to 10 of 32 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

POLD1

General Information

Functions

Localization

Domains (AlphaFold: POLD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for POLD1 is not avaliable on ENCORE database.

29 proteins are bound to POLD1 RNA:

eCLIP assay for POLD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for POLD1 is not available on ENCORE database.

114 RBPs can affect the gene expression of POLD1 :

The Knockdown/knockout RNA-Seq assay for POLD1 is not available on ENCORE database.

22 RBPs can affect the splicing of POLD1 :

The Knockdown/knockout RNA-Seq assay for POLD1 is not avaliable on ENCORE database.