RNH1

General Information

Gene Name       : RNH1
Gene ID             : ENSG00000023191.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNH1)


Antibody Validation

 View validation images for all RNH1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNH1ENSG00000023191.164.5317.0210.78ENCSR000AEF
HepG2RNH1ENSG00000023191.1670.3312.6041.46ENCSR985KAT
K562RNH1ENSG00000023191.1677.5129.7853.65ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq RNH1-BGHcLV32-HepG2ENCSR706QGCRNH1HepG2ReleasedENCSR232ERY   CRISPRKD% = 59.9,56.4






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
RNH1ENCAB384YLRA305-357A1Released, ENCODE4BGHcLV32-37, Released, ENCODE4
RNH1ENCAB513QMBA305-356A1Released, ENCODE4BGHcLV32-37, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RNH1K562CRISPRBGKcLV30-39,BGKcLV30-40BGKcLV30-1,BGKcLV30-20.0,0.0NotSatisfiedENCODE4
RNH1K562CRISPRBGKcLV35-33,BGKcLV35-34BGKcLV35-1,BGKcLV35-245.4,41.0NotSatisfiedENCORE2
RNH1HepG2CRISPRENCSR706QGCENCSR232ERYRNH1-BGHcLV32-37,RNH1-BGHcLV32-38NT-BGHcLV32-1,NT-BGHcLV32-259.9,56.4ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
RNH1Product_ID: A305-356A
Lot_ID: 1
Source: Bethyl Labs
Target Name: RNH1-human		 RNH1-HEPG2-CRISPR-A305-356A.png<br>Caption: Western blot following CRISPR against RNH1 in HepG2 whole cell lysate using RNH1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RNH1. RNH1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 Bethyl_A305-356A_1_RNH1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RNH1 specific antibody, A305-356A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RNH1-specific antibody, A305-356A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
RNH1Product_ID: A305-357A
Lot_ID: 1
Source: Bethyl Labs
Target Name: RNH1-human		 RNH1-HEPG2-A305-357A.png<br>Caption: Western blot following CRISPR against RNH1 in HepG2 whole cell lysate using RNH1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RNH1. RNH1 protein appears as the green arrow, Tubulin serves as a control and appears in red arrow.
 Bethyl_A305-357A_1_RNH1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RNH1 specific antibody, A305-357A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RNH1-specific antibody, A305-357A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








RNA Targets

  • eCLIP assay for RNH1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RNH1 RNA is bound by 34 proteins.  







eCLIP assay for RNH1 is not avaliable on ENCORE database.





34 proteins are bound to RNH1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11499109499185-3'-UTR,CDS,intron-Distal3.319184.08412K562RBM15
chr11500492500534-3'-UTR,CDS,intron-Distal,intron-Proximal3.336083.56169K562RBM15
chr11498460498498-3'-UTR,CDS,intron-Distal4.349065.79466HepG2RPS3
chr11498889498962-3'-UTR,CDS,intron-Distal,intron-Proximal3.094005.62468K562BUD13
chr11498110498161-3'-UTR,CDS,intron-Distal,intron-Proximal3.964897.90583K562AQR
chr11499130499212-3'-UTR,CDS,intron-Distal,intron-Proximal4.6820012.20816K562BUD13
chr11500560500580-3'-UTR,CDS,intron-Distal,intron-Proximal4.4862618.20447K562YBX3
chr11499778499879-3'-UTR,CDS,intron-Distal,intron-Proximal4.0358510.32093HepG2PRPF8
chr11499160499209-3'-UTR,CDS,intron-Distal,intron-Proximal3.929355.83621K562AQR
chr11500580500596-3'-UTR,CDS,intron-Distal,intron-Proximal4.8882116.47345K562YBX3
chr11495007495085-3'-UTR,CDS,intron-Distal,intron-Proximal4.853344.13847K562AQR
chr11500616500665-3'-UTR,CDS,intron-Distal,intron-Proximal3.122589.26797K562BUD13
chr11494677494769-3'-UTR,CDS,intron-Distal3.623923.27746HepG2LIN28B
chr11498840498930-3'-UTR,CDS,intron-Distal,intron-Proximal3.992397.26626HepG2PPIG
chr11494516494597-3'-UTR,intron-Distal,intron-Proximal4.082213.97054K562IGF2BP1
chr11502138502217-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1399111.54471K562YBX3
chr11494533494591-3'-UTR,intron-Distal,intron-Proximal6.130489.28899K562PABPC4
chr11498418498458-3'-UTR,CDS,intron-Distal,intron-Proximal4.879545.68502HepG2PRPF8
chr11498773498823-3'-UTR,CDS,intron-Distal,intron-Proximal4.037846.19394HepG2RPS3
chr11498762498814-3'-UTR,CDS,intron-Distal,intron-Proximal3.627123.05161HepG2PPIG
chr11499015499071-3'-UTR,CDS,intron-Distal,intron-Proximal4.090124.68902HepG2PPIG
chr11500439500485-3'-UTR,CDS,intron-Distal,intron-Proximal4.284525.93840HepG2PRPF8
chr11499163499232-3'-UTR,CDS,intron-Distal,intron-Proximal4.019436.86590K562SF3B4
chr11499834499870-3'-UTR,CDS,intron-Distal,intron-Proximal4.264314.16170K562UCHL5
chr11500673500761-3'-UTR,CDS,intron-Distal,intron-Proximal3.000594.11539HepG2RBFOX2
chr11498455498496-3'-UTR,CDS,intron-Distal,intron-Proximal4.758644.67689HepG2PPIG
chr11498567498607-3'-UTR,CDS,intron-Distal,intron-Proximal5.188096.24443HepG2RPS3
chr11494977495043-3'-UTR,CDS,intron-Distal,intron-Proximal3.771133.46958K562YBX3
chr11495017495123-3'-UTR,CDS,intron-Distal,intron-Proximal3.937689.48554K562SF3B4
chr11499908499955-3'-UTR,CDS,intron-Distal,intron-Proximal3.989104.12025K562YBX3
chr11494707494768-3'-UTR,CDS,intron-Distal5.8916533.89949K562LIN28B
chr11494629494717-3'-UTR,CDS,intron-Distal3.462443.25727K562METAP2
chr11494918495054-3'-UTR,CDS,intron-Distal,intron-Proximal4.238097.67223HepG2G3BP1
chr11506224506271-5'-UTR,intron-Distal4.012823.17740K562CSTF2T
chr11507112507227-5'-UTR,intron-Distal,intron-Proximal3.781665.11648K562DDX3X
chr11503373503411-5'-UTR,intron-Distal3.909683.76710K562NONO
chr11504532504581-5'-UTR,intron-Distal,intron-Proximal4.472435.27179K562EWSR1
chr11504479504553-5'-UTR,intron-Distal,intron-Proximal3.491849.05327HepG2CSTF2T
chr11504539504635-5'-UTR,intron-Distal,intron-Proximal3.217353.14636HepG2FAM120A
chr11504478504505-5'-UTR,intron-Distal4.764963.59041K562DROSHA
chr11502637502719-5'-UTR,intron-Distal6.0100311.24011HepG2XPO5
chr11506256506293-5'-UTR,intron-Distal3.829453.31905K562NONO
chr11503469503518-5'-UTR,intron-Distal4.386894.72743K562NONO
chr11504822504885-5'-UTR,intron-Distal,intron-Proximal3.759566.82724K562YBX3
chr11506214506297-5'-UTR,intron-Distal3.907796.00028K562EWSR1
chr11502063502147-CDS,intron-Distal,intron-Proximal4.196784.04622HepG2GRWD1
chr11502017502066-CDS,intron-Distal,intron-Proximal3.857385.35619K562AQR
chr11502062502153-CDS,intron-Distal,intron-Proximal3.176894.68592HepG2PPIG
chr11499955500000-CDS,intron-Distal,intron-Proximal3.449865.15749K562YBX3
chr11506413506501-intron-Distal,intron-Proximal3.421105.41408K562NONO
chr11497420497487-intron-Distal3.010015.63059K562IGF2BP1
chr11504702504803-intron-Distal,intron-Proximal3.1948310.27184K562TIA1
chr11496998497034-intron-Distal4.607817.41259K562AATF
chr11497740497805-intron-Distal6.4782825.40191K562TARDBP
chr11497598497696-intron-Distal3.113744.92519HepG2IGF2BP1
chr11503713503843-intron-Distal3.081575.82536K562CSTF2T
chr11506873506940-intron-Distal,intron-Proximal4.811513.62726K562DROSHA
chr11497933497961-intron-Distal,intron-Proximal5.0094810.02297K562EIF4G2
chr11504570504688-intron-Distal,intron-Proximal4.893937.23918HepG2PRPF4
chr11504730504768-intron-Distal,intron-Proximal4.396434.75718K562EWSR1
chr11506879506951-intron-Distal,intron-Proximal4.135384.10339HepG2CSTF2T
chr11497339497380-intron-Distal5.5318110.29201K562AATF
chr11497207497285-intron-Distal5.5374426.18561K562TARDBP
chr11504206504238-intron-Distal3.978753.30664K562NONO
chr11497216497278-intron-Distal4.148934.33846HepG2IGF2BP1
chr11504202504229-intron-Distal3.119863.54602K562TIA1
chr11497440497489-intron-Distal5.825976.69377HepG2DKC1
chr11506880506952-intron-Distal,intron-Proximal4.033533.21228K562TIA1
chr11497805497875-intron-Distal,intron-Proximal6.5759728.18855K562TARDBP
chr11497750497797-intron-Distal4.230174.86695K562IGF2BP1
chr11497660497709-intron-Distal5.8452317.00324K562TARDBP
chr11504310504399-intron-Distal5.103958.18518K562EWSR1
chr11497130497189-intron-Distal6.7112134.56757K562EIF4G2
chr11504698504808-intron-Distal,intron-Proximal4.704974.98572HepG2TIAL1
chr11497559497584-intron-Distal4.933346.02873K562TARDBP
chr11497042497207-intron-Distal5.8035247.51798K562TARDBP
chr11501973502017-intron-Distal,intron-Proximal4.885414.13847K562AQR
chr11504719504785-intron-Distal,intron-Proximal4.281613.30664K562NONO
chr11506527506589-intron-Distal4.412913.02731K562AKAP8L
chr11497612497683-intron-Distal4.380303.38582HepG2SRSF7
chr11503921503970-intron-Distal3.437243.64784K562EWSR1
chr11504197504243-intron-Distal3.013244.12745K562EWSR1
chr11504560504605-intron-Distal,intron-Proximal3.654113.51298K562AKAP8L
chr11497926497964-intron-Distal,intron-Proximal4.618604.48002K562AQR
chr11497430497503-intron-Distal6.3458024.22342K562TARDBP
chr11504290504352-intron-Distal3.550393.15856K562FUS
chr11499194499246-intron-Distal,intron-Proximal3.221203.33980HepG2SF3B4
chr11504554504621-intron-Distal,intron-Proximal3.9394310.06144HepG2CSTF2T
chr11497456497495-intron-Distal5.181596.22228K562AATF
chr11506360506413-intron-Distal,intron-Proximal4.163164.58989K562NONO
chr11497821497864-intron-Distal4.216944.43679K562IGF2BP1
chr11501956502047-intron-Distal,intron-Proximal3.258667.00957K562PRPF8
chr11497587497692-intron-Distal3.155637.42053K562IGF2BP1
chr11501994502036-intron-Distal,intron-Proximal4.348913.98488K562TIA1
chr11504084504175-intron-Distal3.683713.41858K562FUS
chr11503709503740-intron-Distal3.679973.06347K562NONO
chr11497332497419-intron-Distal8.1886656.18653K562EIF4G2
chr11504637504719-intron-Distal,intron-Proximal3.054054.62806K562CSTF2T
chr11504092504136-intron-Distal3.142354.95625K562EWSR1
chr11497582497715-intron-Distal7.8094892.36593K562EIF4G2
chr11497189497292-intron-Distal7.4031658.09812K562EIF4G2
chr11497742497832-intron-Distal7.8663441.53514K562EIF4G2
chr11497049497126-intron-Distal7.3346857.59566K562EIF4G2
chr11506526506603-intron-Distal3.171584.38238K562CSTF2T
chr11504653504694-intron-Distal4.175633.40229HepG2CSTF2T
chr11497198497280-intron-Distal6.8515210.61497K562AATF
chr11499771499825-intron-Distal,intron-Proximal5.105418.53052K562RBM15
chr11496986497049-intron-Distal7.8661339.51752K562EIF4G2
chr11499325499386-intron-Distal,intron-Proximal3.047834.00731K562UCHL5
chr11495835495907-intron-Distal3.635745.48395K562EIF4G2
chr11506866506939-intron-Distal,intron-Proximal4.663165.91582K562NONO
chr11498404498456-intron-Distal,intron-Proximal6.0442812.10660K562AQR
chr11497584497660-intron-Distal5.4702224.49761K562TARDBP
chr11501905501956-intron-Distal4.554955.33214K562PRPF8
chr11501961502027-intron-Distal,intron-Proximal5.757188.93136HepG2EFTUD2
chr11504190504225-intron-Distal3.166083.69530HepG2CSTF2T
chr11504686504766-intron-Distal,intron-Proximal4.095034.85687K562DROSHA
chr11503732503850-intron-Distal3.053483.22032K562FUS
chr11503791503830-intron-Distal4.110263.98553K562NONO
chr11504578504662-intron-Distal,intron-Proximal4.649299.80560K562DROSHA
chr11501979502044-intron-Distal,intron-Proximal4.390019.66374K562BUD13
chr11504635504767-intron-Distal,intron-Proximal3.104723.74766HepG2FAM120A
chr11499774499829-intron-Distal,intron-Proximal3.0007210.48594K562AQR
chr11504367504417-intron-Distal3.131614.90123HepG2CSTF2T
chr11497554497582-intron-Distal6.4984714.94161K562EIF4G2
chr11497331497390-intron-Distal5.3300622.79649K562TARDBP
chr11497390497427-intron-Distal4.6971013.73871K562TARDBP
chr11499712499761-intron-Distal,intron-Proximal3.199703.94281K562PRPF8
chr11497419497505-intron-Distal8.3680655.17501K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNH1 is not available on ENCORE database.

  • 130 RBPs can affect the levels of RNH1.  








The Knockdown/knockout RNA-Seq assay for RNH1 is not available on ENCORE database.





130 RBPs can affect the gene expression of RNH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNH1ENSG00000023191.121611.780901129.661200.5127010.223009.20700HepG2ACO1
RNH1ENSG00000023191.121857.973301066.949800.800103.103202.54410HepG2AKAP1
RNH1ENSG00000023191.121349.841601134.859900.250202.462601.73410HepG2AKAP8L
RNH1ENSG00000023191.12924.34270533.606800.792607.633806.70020HepG2BOP1
RNH1ENSG00000023191.121432.019501129.284900.342505.090104.23830HepG2CKAP4
RNH1ENSG00000023191.12856.76240504.055600.765202.617701.87440HepG2CNOT7
RNH1ENSG00000023191.12656.73050361.564200.8609010.725108.78400HepG2YBX3
RNH1ENSG00000023191.121065.07300591.150900.8493016.3512015.04650HepG2CELF1
RNH1ENSG00000023191.12858.34680635.666000.433205.246004.27060HepG2DAZAP1
RNH1ENSG00000023191.12528.28530362.060100.545002.503201.40620HepG2DDX1
RNH1ENSG00000023191.121549.199501021.792800.600302.260701.69020HepG2DDX3X
RNH1ENSG00000023191.121190.65930566.395201.071803.825302.93130HepG2DDX55
RNH1ENSG00000023191.121991.37150878.363701.180804.009103.27670HepG2DDX6
RNH1ENSG00000023191.12768.487401080.74580-0.491906.673805.70960HepG2DKC1
RNH1ENSG00000023191.12751.55680355.016701.0819019.7407018.04730HepG2DNAJC21
RNH1ENSG00000023191.12682.38550351.899600.9553018.3822016.84550HepG2DNAJC2
RNH1ENSG00000023191.12895.46150662.145700.435402.442801.57410HepG2EEF2
RNH1ENSG00000023191.121327.95670843.774500.654201.978301.46730HepG2EIF2S1
RNH1ENSG00000023191.12761.36120600.721700.341802.029401.32410HepG2EIF4G2
RNH1ENSG00000023191.12705.71860981.49070-0.475902.333701.32690HepG2ESF1
RNH1ENSG00000023191.122163.086901749.061000.306401.927401.40620HepG2ETF1
RNH1ENSG00000023191.12707.53980480.507600.558203.189101.92180HepG2FAM120A
RNH1ENSG00000023191.12859.49350427.077901.008905.285503.33120HepG2HNRNPA0
RNH1ENSG00000023191.12755.31960416.958800.857103.620802.01230HepG2HNRNPAB
RNH1ENSG00000023191.12976.41980835.024800.225601.915301.31100HepG2HNRNPF
RNH1ENSG00000023191.121743.54210884.935000.978307.324106.22770HepG2HNRNPK
RNH1ENSG00000023191.12983.10950579.053300.7636015.5426014.06240HepG2HNRNPL
RNH1ENSG00000023191.12724.75030529.842100.451802.055001.50400HepG2HNRNPLL
RNH1ENSG00000023191.12640.79310396.043500.694105.223304.41080HepG2HNRNPU
RNH1ENSG00000023191.12675.59920404.544300.7398011.9991010.59590HepG2ILF2
RNH1ENSG00000023191.12896.81000481.146500.898203.934202.46610HepG2KHDRBS1
RNH1ENSG00000023191.12786.01430388.840601.015307.832406.00880HepG2LARP7
RNH1ENSG00000023191.121549.84090946.882500.710803.418502.72360HepG2MATR3
RNH1ENSG00000023191.121476.81270969.067300.607702.437101.84060HepG2NCBP2
RNH1ENSG00000023191.12549.64690351.542200.644702.706401.30830HepG2NIP7
RNH1ENSG00000023191.121294.07170630.323301.0377011.072309.58590HepG2NOL12
RNH1ENSG00000023191.12424.68230252.609200.749404.013402.29170HepG2NOLC1
RNH1ENSG00000023191.12996.88800520.543300.937304.144402.78820HepG2NONO
RNH1ENSG00000023191.121170.71640460.973901.344506.825405.39000HepG2PABPC1
RNH1ENSG00000023191.12549.20040392.007900.486402.561301.74330HepG2PARN
RNH1ENSG00000023191.121161.68630967.280900.264102.560301.97050HepG2PCBP1
RNH1ENSG00000023191.12791.26030353.238101.163409.379208.06540HepG2PPIL4
RNH1ENSG00000023191.121198.57770984.267900.284101.859201.39330HepG2PTBP1
RNH1ENSG00000023191.121321.75280601.689401.1353022.2968020.82070HepG2PUF60
RNH1ENSG00000023191.121287.69080638.708901.0115031.8645030.30140HepG2PUM1
RNH1ENSG00000023191.121136.26100638.249200.832005.210404.30360HepG2PUM2
RNH1ENSG00000023191.12876.98640468.915700.903105.657004.22360HepG2RBM27
RNH1ENSG00000023191.12838.53850380.783801.138804.702203.31120HepG2RCC2
RNH1ENSG00000023191.12756.70060432.400000.807303.287402.41510HepG2RPS2
RNH1ENSG00000023191.12942.16110441.456001.093609.190207.24580HepG2RPS5
RNH1ENSG00000023191.12871.10870352.690801.3043034.3962032.49640HepG2SAFB2
RNH1ENSG00000023191.12828.82470477.374800.795802.794901.47820HepG2SART3
RNH1ENSG00000023191.121591.47450990.875700.683505.956604.94380HepG2SF3A3
RNH1ENSG00000023191.121274.714501024.708100.314903.482602.82930HepG2SF3B4
RNH1ENSG00000023191.121012.86370576.903900.8119017.4787015.99990HepG2SLBP
RNH1ENSG00000023191.12814.66190411.291200.9859021.5327019.99920HepG2SMN1
RNH1ENSG00000023191.12997.62320480.515601.053803.228402.18440HepG2SMNDC1
RNH1ENSG00000023191.121209.056601651.05640-0.449504.674304.07290HepG2SRFBP1
RNH1ENSG00000023191.12706.022201069.59040-0.599309.174508.42550HepG2SRSF1
RNH1ENSG00000023191.121050.61550594.067500.8224016.3155014.97360HepG2SRSF5
RNH1ENSG00000023191.12601.98100870.18350-0.531607.211306.39510HepG2SRSF9
RNH1ENSG00000023191.12897.13010441.285601.023505.487703.88780HepG2STIP1
RNH1ENSG00000023191.121465.53260675.629701.1170037.9804036.14270HepG2SUCLG1
RNH1ENSG00000023191.12486.75670961.43700-0.9820011.8779010.84130HepG2TAF15
RNH1ENSG00000023191.12618.39990384.808100.684304.726804.10890HepG2TIAL1
RNH1ENSG00000023191.12948.82740388.271801.2890034.7734033.05310HepG2TRIM56
RNH1ENSG00000023191.121412.89190978.660200.529703.671602.95180HepG2U2AF1
RNH1ENSG00000023191.121620.58560622.172901.381004.185503.14420HepG2UBE2L3
RNH1ENSG00000023191.12653.98090332.900600.974103.767202.88210HepG2UCHL5
RNH1ENSG00000023191.121078.95730878.756000.296003.151202.41590HepG2UPF1
RNH1ENSG00000023191.121016.24440848.403200.260302.491101.91690HepG2UTP3
RNH1ENSG00000023191.121010.45310454.136901.153707.538705.73100HepG2XPO5
RNH1ENSG00000023191.12553.48680702.96220-0.344903.090902.38840HepG2ZC3H8
RNH1ENSG00000023191.121578.93110966.462300.7081020.1317018.99100HepG2ZNF622
RNH1ENSG00000023191.123115.863302084.263000.5800015.8979014.65320K562AGGF1
RNH1ENSG00000023191.122213.774301509.529800.5523010.939708.09590K562AKAP1
RNH1ENSG00000023191.123844.181302168.783600.825707.220306.12170K562AKAP8L
RNH1ENSG00000023191.123107.394802433.653200.352503.485702.84290K562AQR
RNH1ENSG00000023191.121807.568101475.115300.293103.788901.34240K562ASCC1
RNH1ENSG00000023191.122776.025602275.601700.286703.602902.54890K562ATP5C1
RNH1ENSG00000023191.122085.428901060.294900.9758010.312708.44580K562BCLAF1
RNH1ENSG00000023191.12868.92400525.455100.725607.157805.73290K562BOP1
RNH1ENSG00000023191.121201.84890731.208700.716805.952904.11260K562CIRBP
RNH1ENSG00000023191.122049.358101405.559300.543902.932701.83310K562CNOT7
RNH1ENSG00000023191.122769.311002032.484700.446208.110606.19020K562CPEB4
RNH1ENSG00000023191.121054.64120558.669400.9166014.8903013.04070K562CPSF6
RNH1ENSG00000023191.121840.78450804.392001.1943015.0562012.35420K562CSTF2
RNH1ENSG00000023191.122898.053602286.431800.341905.366603.63910K562DDX21
RNH1ENSG00000023191.122010.600001529.620200.394404.538903.15670K562DDX3X
RNH1ENSG00000023191.122424.584402102.783900.205302.288701.68710K562DDX47
RNH1ENSG00000023191.121566.01730873.027300.842903.162201.34410K562DDX51
RNH1ENSG00000023191.122295.672801550.859100.565705.295203.27700K562DDX6
RNH1ENSG00000023191.122101.30520836.023901.329604.006802.43430K562EEF2
RNH1ENSG00000023191.121334.58770807.398700.724902.279701.45070K562EFTUD2
RNH1ENSG00000023191.122094.933501680.269800.318104.572102.99150K562EIF2S1
RNH1ENSG00000023191.122252.144601826.413100.302203.695702.88570K562EIF2S2
RNH1ENSG00000023191.12663.06830434.160700.610806.134204.96530K562EIF3G
RNH1ENSG00000023191.122197.509601439.232600.6105010.864908.44420K562EIF4B
RNH1ENSG00000023191.122110.332301395.021100.5971010.428807.61570K562EWSR1
RNH1ENSG00000023191.122040.368501123.986100.860106.301404.98750K562FIP1L1
RNH1ENSG00000023191.1291.51060319.69030-1.8047014.1720012.30030K562G3BP2
RNH1ENSG00000023191.121058.65080533.359600.988904.507103.49720K562GPKOW
RNH1ENSG00000023191.123869.398502433.681800.6689012.2502010.63910K562GRSF1
RNH1ENSG00000023191.122042.31280682.957901.580203.742302.48000K562IGF2BP2
RNH1ENSG00000023191.121244.70170694.368200.841904.073802.56420K562IGF2BP3
RNH1ENSG00000023191.121270.86300717.038400.825607.643506.22070K562MAGOH
RNH1ENSG00000023191.121229.21250715.473800.780704.134802.98930K562MATR3
RNH1ENSG00000023191.12962.40000520.632100.8863012.2919010.37170K562METAP2
RNH1ENSG00000023191.122476.740402031.775800.285604.303703.31360K562MTPAP
RNH1ENSG00000023191.121659.45040797.055401.057904.300602.58800K562NONO
RNH1ENSG00000023191.123035.224902257.552600.426909.177707.92650K562NSUN2
RNH1ENSG00000023191.122193.608501229.364100.835304.724103.33500K562PABPN1
RNH1ENSG00000023191.121034.52910637.854600.697602.379501.47600K562PCBP2
RNH1ENSG00000023191.123953.749703207.309700.301802.929001.44880K562PNPT1
RNH1ENSG00000023191.122122.296201276.232100.733604.113903.08740K562PPIG
RNH1ENSG00000023191.122363.009001461.851800.692703.122201.53870K562PPP1R8
RNH1ENSG00000023191.121406.83780785.707500.840302.837802.07990K562PRPF8
RNH1ENSG00000023191.121507.04850696.701801.1130012.0301010.69780K562PTBP1
RNH1ENSG00000023191.123819.531702150.741800.8285015.5901014.34020K562PUS1
RNH1ENSG00000023191.12530.89620357.562900.570104.958602.44010K562QKI
RNH1ENSG00000023191.122914.917702095.653800.476008.473407.46050K562RBM15
RNH1ENSG00000023191.121399.27430667.658601.067408.730207.11440K562RBM22
RNH1ENSG00000023191.121304.67670651.142301.002502.925201.49270K562RBM34
RNH1ENSG00000023191.121546.495201026.525800.591105.223503.85590K562RCC2
RNH1ENSG00000023191.12494.28840324.371000.607604.708302.39120K562RECQL
RNH1ENSG00000023191.12629.06150427.579900.556905.986803.67040K562RPS10
RNH1ENSG00000023191.121856.880701280.370500.536203.043901.43910K562SBDS
RNH1ENSG00000023191.121129.207901539.31480-0.447003.246301.66960K562SDAD1
RNH1ENSG00000023191.121704.997001124.445700.600502.390401.30550K562SF1
RNH1ENSG00000023191.122831.921402227.528300.346202.957402.11640K562SF3A3
RNH1ENSG00000023191.12679.26510332.251101.0316015.7638013.59460K562SF3B4
RNH1ENSG00000023191.122346.329101371.059300.775003.750402.14420K562SFPQ
RNH1ENSG00000023191.121488.88630973.052600.613505.275403.72260K562SRFBP1
RNH1ENSG00000023191.121404.50880785.171700.838903.169401.40640K562SRP68
RNH1ENSG00000023191.121305.45820683.081300.934309.285608.00120K562SRSF1
RNH1ENSG00000023191.121306.567001002.247100.382403.373502.19610K562SRSF4
RNH1ENSG00000023191.121331.73350645.319801.045108.033206.14330K562SRSF5
RNH1ENSG00000023191.121877.26540759.937001.304604.584303.25050K562SUPV3L1
RNH1ENSG00000023191.121335.316301675.95370-0.327802.052601.34430K562SYNCRIP
RNH1ENSG00000023191.121652.11880691.147801.257209.113507.72770K562TARDBP
RNH1ENSG00000023191.121245.27360693.215800.845003.320701.46560K562TFIP11
RNH1ENSG00000023191.121538.46840666.736101.2062011.9600010.14650K562TIA1
RNH1ENSG00000023191.121325.27280654.680701.017307.552405.52460K562TRA2A
RNH1ENSG00000023191.122151.624801149.587700.904207.583005.83750K562TRIM56
RNH1ENSG00000023191.122782.339403248.98100-0.223702.532901.32400K562TROVE2
RNH1ENSG00000023191.121386.01640804.698800.784302.361201.42920K562UCHL5
RNH1ENSG00000023191.123023.044002393.725600.336606.050405.03570K562UPF1
RNH1ENSG00000023191.121897.484901452.576000.385402.587701.42990K562UTP3
RNH1ENSG00000023191.122462.230202048.244100.265502.298401.49980K562WDR3
RNH1ENSG00000023191.121719.755102129.87650-0.308605.019603.91050K562WDR43
RNH1ENSG00000023191.121859.56090820.038001.181105.796703.82750K562XRN2
RNH1ENSG00000023191.124011.908302741.379900.549308.041306.45100K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNH1 is not available on ENCORE database.





37 RBPs can affect the splicing of RNH1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.324000.000040.03448includedK562TAF15
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.141000.000300.08266excludedK562IGF2BP2
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.221000.000070.08094excludedK562RPS3
SERNH1ENSG00000023191.12chr11-504823504996502061502249506608506800-0.221000.000300.02379excludedHepG2RBM22
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.084000.000370.01437excludedK562AKAP8L
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.109000.000020.01334includedK562PUM1
SERNH1ENSG00000023191.12chr11-5048235049965020615022495066085068000.149000.003790.07779includedHepG2HNRNPK
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.275000.004390.04791excludedHepG2U2AF2
SERNH1ENSG00000023191.12chr11-504823504996502061502249506608506800-0.187000.001270.06896excludedHepG2AKAP1
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.158000.000030.02457includedHepG2SUGP2
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.092000.000090.00220excludedK562PUS1
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.105000.000020.03730includedK562DHX30
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.307000.000000.00268includedHepG2HLTF
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.272000.000040.00147includedK562U2AF1
SERNH1ENSG00000023191.12chr11-504823504996502061502181506608506800-0.252000.000810.05703excludedHepG2HNRNPL
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.329000.000000.00076includedK562TBRG4
SERNH1ENSG00000023191.12chr11-504823504996502061502181507112507218-0.190000.000770.09831excludedK562SRSF7
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.099000.000040.00269excludedK562UTP18
SERNH1ENSG00000023191.12chr11-5048235049965020615022495071125072180.267000.000010.00038includedK562U2AF2
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.091000.000210.00788excludedK562RBM15
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.120000.000000.00003excludedK562AGGF1
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.083000.000050.01786excludedK562SAFB
SERNH1ENSG00000023191.12chr11-504823504996502061502249507112507218-0.208000.000210.04124excludedK562EIF3G
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049960.141000.000000.00024longerHepG2SF3A3
A3SSRNH1ENSG00000023191.12chr11-502061502249502061502181504823504996-0.314000.000000.00000shorterHepG2HNRNPK
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049960.086000.000010.00191longerK562AKAP8L
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049720.196000.000020.00112longerHepG2U2AF2
A3SSRNH1ENSG00000023191.12chr11-4979704981664979704981414984564986270.060000.000010.00008longerK562AQR
A3SSRNH1ENSG00000023191.12chr11-5004835007385004835006545020615022490.074000.000000.00000longerK562AQR
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235050220.089000.000070.00060longerK562AQR
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049960.123000.000000.00000longerK562PUS1
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049960.097000.000000.00066longerK562UTP18
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049720.120000.000000.00060longerK562SF3B1
A3SSRNH1ENSG00000023191.12chr11-499061499292499061499185499828499999-0.148000.000310.06889shorterK562TARDBP
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049720.117000.000000.00000longerK562RBM15
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049960.214000.000020.04981longerHepG2RBFOX2
A3SSRNH1ENSG00000023191.12chr11-5020615022495020615021815048235049960.098000.000000.00077longerK562HNRNPC
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.148000.014200.08090includedHepG2U2AF2
RIRNH1ENSG00000023191.12chr11-499014499999499014499185499828499999-0.204000.000000.00270excludedK562IGF2BP2
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.212000.004130.04684includedHepG2PRPF8
RIRNH1ENSG00000023191.12chr11-499014499999499014499185499828499999-0.242000.000000.00001excludedK562SRSF1
RIRNH1ENSG00000023191.12chr11-499014499999499014499185499828499999-0.204000.000090.01837excludedK562MATR3
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.191000.000020.00286includedK562PHF6
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.139000.000010.00028includedHepG2U2AF1
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.105000.000470.01135includedHepG2G3BP1
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.128000.000080.00372includedHepG2KHSRP
RIRNH1ENSG00000023191.12chr11-499014499999499014499185499828499999-0.088000.000090.01413excludedK562ZC3H8
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.171000.000000.00001includedHepG2HNRNPK
RIRNH1ENSG00000023191.12chr11-4990144999994990144991854998284999990.235000.000800.01045includedK562EFTUD2
RIRNH1ENSG00000023191.12chr11-499014499999499014499185499828499999-0.253000.000000.00000excludedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RNH1 is not avaliable on ENCORE database.