ATG4B

General Information

Gene Name       : ATG4B
Gene ID             : ENSG00000168397.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATG4B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATG4BENSG00000168397.1622.6741.3131.99ENCSR000AEF
HepG2ATG4BENSG00000168397.16163.96111.84137.90ENCSR985KAT
K562ATG4BENSG00000168397.1635.8437.5736.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATG4B is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATG4B RNA is bound by 44 proteins.  







eCLIP assay for ATG4B is not avaliable on ENCORE database.





44 proteins are bound to ATG4B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2242608026242608060+3'-UTR,CDS3.823287.36645HepG2PPIG
chr2242606193242606250+3'-UTR,CDS3.311966.57251HepG2ZNF800
chr2242610803242610866+3'-UTR,CDS,intron-Proximal3.244674.59403K562GPKOW
chr2242611662242611724+3'-UTR,CDS3.0947712.86579HepG2PPIG
chr2242607905242607982+3'-UTR,CDS,intron-Proximal3.012565.04695HepG2SF3A3
chr2242594685242594747+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0002815.52097HepG2PPIG
chr2242611564242611654+3'-UTR,CDS,intron-Proximal3.5296116.00094HepG2U2AF2
chr2242612080242612140+3'-UTR4.452145.07111HepG2UPF1
chr2242606106242606127+3'-UTR,CDS3.107406.43962HepG2GRWD1
chr2242613129242613183+3'-UTR5.110997.70404K562UPF1
chr2242606059242606100+3'-UTR,CDS,intron-Proximal3.353744.41856HepG2UCHL5
chr2242592966242592983+3'-UTR,5'-UTR,CDS3.8975110.70743HepG2PPIG
chr2242612360242612392+3'-UTR4.360463.95192HepG2UPF1
chr2242592987242593000+3'-UTR,5'-UTR,CDS3.155836.85674HepG2GRWD1
chr2242594051242594064+3'-UTR,5'-UTR,CDS,intron-Proximal3.255038.63039HepG2GRWD1
chr2242611549242611713+3'-UTR,CDS,intron-Proximal3.0876914.51336K562BUD13
chr2242606061242606097+3'-UTR,CDS4.070803.59941K562UCHL5
chr2242606175242606250+3'-UTR,CDS3.4339413.74429HepG2PPIG
chr2242610819242610850+3'-UTR,CDS,intron-Proximal5.0598425.61047K562AQR
chr2242608066242608138+3'-UTR,CDS,intron-Proximal4.1653723.25771HepG2PRPF8
chr2242592858242592968+3'-UTR,5'-UTR,CDS,intron-Proximal3.7708313.34009HepG2SF3B4
chr2242608089242608102+3'-UTR,CDS,intron-Proximal4.064367.36645HepG2PPIG
chr2242590483242590505+3'-UTR,5'-UTR,CDS3.546485.19978HepG2BUD13
chr2242612289242612360+3'-UTR4.144978.55453HepG2UPF1
chr2242593984242594049+3'-UTR,5'-UTR,CDS3.355306.45193HepG2UCHL5
chr2242590439242590510+3'-UTR,5'-UTR,CDS3.754035.53307K562ZNF622
chr2242611814242611866+3'-UTR3.457815.92186HepG2UPF1
chr2242611950242612007+3'-UTR3.497164.51787HepG2AKAP1
chr2242590712242590735+3'-UTR,5'-UTR,CDS,intron-Distal3.231196.36764HepG2GRWD1
chr2242592926242592966+3'-UTR,5'-UTR,CDS,intron-Proximal3.1884315.72306HepG2PPIG
chr2242593913242594005+3'-UTR,5'-UTR,CDS,intron-Proximal3.666247.98670K562SF3B4
chr2242608014242608067+3'-UTR,CDS3.103937.07812HepG2GRWD1
chr2242613023242613078+3'-UTR4.871036.23478HepG2AKAP1
chr2242610767242610895+3'-UTR,CDS,intron-Proximal3.2758635.76015HepG2BUD13
chr2242612415242612466+3'-UTR4.297894.92727HepG2AKAP1
chr2242593017242593025+3'-UTR,5'-UTR,CDS3.4960215.15470HepG2PPIG
chr2242606060242606106+3'-UTR,CDS3.041357.55533HepG2GRWD1
chr2242610142242610197+3'-UTR,CDS3.5989818.52318HepG2PPIG
chr2242593969242594051+3'-UTR,5'-UTR,CDS3.1017515.40431HepG2GRWD1
chr2242611845242611902+3'-UTR3.075974.25624HepG2AKAP1
chr2242611606242611664+3'-UTR,CDS3.1538715.53906HepG2BUD13
chr2242611586242611654+3'-UTR,CDS,intron-Proximal3.439246.13643K562AQR
chr2242594680242594746+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.954746.22817K562DDX24
chr2242613020242613100+3'-UTR4.391499.30447HepG2UPF1
chr2242612421242612467+3'-UTR4.756175.14974HepG2UPF1
chr2242610741242610805+3'-UTR,CDS3.6335418.57421HepG2GRWD1
chr2242606059242606175+3'-UTR,CDS,intron-Proximal3.8741526.90379HepG2PPIG
chr2242592983242593017+3'-UTR,5'-UTR,CDS3.8251021.11531HepG2PPIG
chr2242590678242590713+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.889936.14226K562ZNF622
chr2242607957242608105+3'-UTR,CDS,intron-Proximal3.750036.77066K562UCHL5
chr2242593006242593063+3'-UTR,5'-UTR,CDS,intron-Proximal3.119069.06307HepG2PRPF8
chr2242610757242610777+3'-UTR,CDS3.2811811.27781HepG2PPIG
chr2242590692242590720+3'-UTR,5'-UTR,CDS,intron-Distal3.440996.93667HepG2PPIG
chr2242610777242610861+3'-UTR,CDS,intron-Proximal3.6189634.85511HepG2PPIG
chr2242612714242612763+3'-UTR3.276493.73678HepG2UPF1
chr2242590720242590751+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.7072312.76774HepG2PPIG
chr2242611531242611608+3'-UTR,CDS,intron-Proximal3.5640410.74369HepG2SF3B4
chr2242611866242611900+3'-UTR4.010243.92497HepG2UPF1
chr2242606127242606166+3'-UTR,CDS3.802787.66537HepG2GRWD1
chr2242607563242607617+3'-UTR,CDS3.289764.59935HepG2ZNF800
chr2242594045242594080+3'-UTR,5'-UTR,CDS,intron-Proximal3.509635.83654K562ZNF622
chr2242606166242606186+3'-UTR,CDS3.533335.24980HepG2GRWD1
chr2242607629242607681+3'-UTR,CDS,intron-Proximal4.4558415.49797HepG2PRPF8
chr2242607506242607636+3'-UTR,CDS,intron-Proximal5.4101120.11577K562SF3B4
chr2242610778242610893+3'-UTR,CDS,intron-Proximal3.2309211.27063K562BUD13
chr2242613030242613129+3'-UTR3.8768511.25148K562UPF1
chr2242606058242606130+3'-UTR,CDS,intron-Proximal3.066036.20058HepG2ZNF800
chr2242592927242592980+3'-UTR,5'-UTR,CDS3.428755.15328HepG2SRSF1
chr2242606186242606218+3'-UTR,CDS3.156316.84034HepG2GRWD1
chr2242590482242590516+3'-UTR,5'-UTR,CDS3.088726.04129HepG2GRWD1
chr2242607580242607615+3'-UTR,CDS3.131154.05119HepG2UCHL5
chr2242594001242594066+3'-UTR,5'-UTR,CDS,intron-Proximal3.3863916.04706HepG2PPIG
chr2242610800242610855+3'-UTR,CDS,intron-Proximal4.347074.07072K562UCHL5
chr2242593960242594001+3'-UTR,5'-UTR,CDS,intron-Proximal3.0244512.82053HepG2PPIG
chr2242611615242611662+3'-UTR,CDS3.1735515.07304HepG2PPIG
chr2242607621242607635+3'-UTR,CDS3.062485.78238HepG2PPIG
chr2242606224242606299+3'-UTR,CDS,intron-Proximal3.9681339.55588HepG2PRPF8
chr2242592988242593025+3'-UTR,5'-UTR,CDS3.297643.49558HepG2UCHL5
chr2242610764242610847+3'-UTR,CDS,intron-Proximal4.086343.48187K562RBM15
chr2242610138242610190+3'-UTR,CDS,intron-Proximal3.064915.96307K562BUD13
chr2242610806242610915+3'-UTR,CDS,intron-Proximal3.9321181.87215HepG2PRPF8
chr2242613034242613085+3'-UTR3.143683.28007HepG2NKRF
chr2242593000242593015+3'-UTR,5'-UTR,CDS3.034186.92380HepG2GRWD1
chr2242610725242610757+3'-UTR,CDS,intron-Proximal3.0435311.93107HepG2PPIG
chr2242590510242590528+3'-UTR,5'-UTR,CDS,intron-Proximal4.048045.37538K562ZNF622
chr2242577107242577177+5'-UTR,CDS,intron-Proximal4.605655.05409HepG2NCBP2
chr2242598515242598597+5'-UTR,CDS,intron-Distal,intron-Proximal3.304526.97987K562ZNF622
chr2242598523242598596+5'-UTR,CDS,intron-Distal3.589064.40383K562UCHL5
chr2242594747242594758+5'-UTR,CDS,intron-Distal3.172966.23779HepG2PPIG
chr2242598523242598579+5'-UTR,CDS,intron-Distal3.0000510.93964HepG2GRWD1
chr2242598524242598601+5'-UTR,CDS,intron-Distal4.4694422.88763HepG2PPIG
chr2242592835242592921+5'-UTR,intron-Proximal4.271679.11312HepG2EFTUD2
chr2242598526242598603+5'-UTR,CDS,intron-Distal,intron-Proximal3.203018.70244HepG2SDAD1
chr2242592866242592925+5'-UTR,intron-Proximal4.5216916.61119HepG2SF3A3
chr2242598582242598602+5'-UTR,CDS,intron-Distal3.015683.67448HepG2UCHL5
chr2242577136242577170+5'-UTR,CDS,intron-Proximal4.119069.38298HepG2PRPF8
chr2242610850242610863+CDS,intron-Proximal5.4492924.69239K562AQR
chr2242591318242591372+CDS,intron-Distal3.025263.87507HepG2DGCR8
chr2242591278242591372+CDS,intron-Distal,intron-Proximal3.396976.41380HepG2KHSRP
chr2242606626242606711+intron-Distal3.374514.95521HepG2CDC40
chr2242595717242595768+intron-Distal3.835835.12778HepG2PCBP2
chr2242597617242597698+intron-Distal4.0874811.72703HepG2PRPF4
chr2242607248242607335+intron-Distal3.454317.36121HepG2HNRNPK
chr2242595685242595788+intron-Distal4.5238711.74241K562HNRNPK
chr2242611374242611481+intron-Distal4.393328.87704HepG2HNRNPK
chr2242595424242595499+intron-Distal4.3173413.46559HepG2HNRNPK
chr2242595589242595627+intron-Distal4.359769.43946HepG2HNRNPK
chr2242592672242592714+intron-Distal,intron-Proximal4.6824816.66170HepG2SF3A3
chr2242592449242592502+intron-Distal3.086235.73318HepG2HNRNPC
chr2242597074242597208+intron-Distal3.9061212.59064HepG2MATR3
chr2242597726242597774+intron-Distal3.272444.13948HepG2PRPF4
chr2242595788242595891+intron-Distal3.1476411.53724HepG2RBFOX2
chr2242608349242608434+intron-Distal3.380303.28089HepG2SRSF7
chr2242590777242590852+intron-Distal,intron-Proximal4.995626.83278K562PRPF8
chr2242595836242595915+intron-Distal4.698505.91742K562HNRNPK
chr2242595966242596020+intron-Distal5.5789310.05561HepG2HNRNPK
chr2242597914242597962+intron-Distal3.670415.60091K562NONO
chr2242597634242597702+intron-Distal3.900167.73643HepG2GTF2F1
chr2242597549242597595+intron-Distal4.047503.76710K562NONO
chr2242608343242608453+intron-Distal3.747713.44195K562TARDBP
chr2242604891242604932+intron-Distal4.999734.66899HepG2HNRNPM
chr2242595264242595333+intron-Distal3.107328.29039HepG2DDX59
chr2242595669242595732+intron-Distal5.0640135.86570HepG2HNRNPK
chr2242591766242591824+intron-Distal4.074774.41713HepG2SRSF1
chr2242594800242594826+intron-Distal,intron-Proximal5.241539.72328HepG2RBFOX2
chr2242611390242611488+intron-Distal3.422479.50194HepG2PCBP2
chr2242592788242592879+intron-Distal,intron-Proximal3.201466.69536HepG2HNRNPM
chr2242592185242592233+intron-Distal3.550816.05660HepG2DGCR8
chr2242594788242594810+intron-Distal,intron-Proximal4.965817.02967HepG2PRPF8
chr2242577268242577367+intron-Distal,intron-Proximal3.129085.75654HepG2CSTF2T
chr2242611101242611134+intron-Distal3.271556.61201HepG2GRWD1
chr2242594213242594300+intron-Distal4.2617416.56910HepG2HNRNPK
chr2242597819242597877+intron-Distal3.904803.41442HepG2HNRNPK
chr2242592821242592882+intron-Distal,intron-Proximal4.171746.36112HepG2XRN2
chr2242597633242597698+intron-Distal3.302597.46255HepG2CSTF2T
chr2242597722242597789+intron-Distal3.378067.02411HepG2NKRF
chr2242608190242608234+intron-Distal,intron-Proximal3.986075.26367K562AQR
chr2242610248242610305+intron-Distal,intron-Proximal4.338638.97789HepG2EFTUD2
chr2242597623242597698+intron-Distal3.503275.49531HepG2FAM120A
chr2242608261242608309+intron-Distal3.257933.37567HepG2HNRNPK
chr2242606621242606700+intron-Distal4.837697.34038HepG2PRPF4
chr2242600393242600480+intron-Distal3.490714.14896HepG2HNRNPM
chr2242604821242604859+intron-Distal3.801125.95943HepG2HNRNPM
chr2242610320242610361+intron-Distal5.5021310.93557HepG2EFTUD2
chr2242595552242595589+intron-Distal3.494347.21999HepG2HNRNPK
chr2242611137242611248+intron-Distal3.2277017.60183HepG2PPIG
chr2242594783242594800+intron-Distal,intron-Proximal4.188328.21449HepG2RBFOX2
chr2242595732242595771+intron-Distal5.5753145.74523HepG2HNRNPK
chr2242607746242607835+intron-Distal3.564354.25955HepG2RBFOX2
chr2242577305242577408+intron-Distal4.611154.36078K562GTF2F1
chr2242594105242594177+intron-Distal,intron-Proximal3.0190515.18467HepG2EFTUD2
chr2242595798242595880+intron-Distal3.7687114.28045HepG2HNRNPK
chr2242597737242597850+intron-Distal3.049366.64948HepG2XRN2
chr2242594630242594673+intron-Distal,intron-Proximal4.540485.03032HepG2SF3B4
chr2242610908242611006+intron-Distal,intron-Proximal3.2154319.10315HepG2PPIG
chr2242595024242595096+intron-Distal4.195233.99137K562NONO
chr2242611377242611459+intron-Distal3.965027.52757HepG2PCBP1
chr2242606632242606720+intron-Distal3.0979914.68628HepG2EFTUD2
chr2242598107242598166+intron-Distal3.438444.48585K562NONO
chr2242611045242611103+intron-Distal3.0341310.56162HepG2PPIG
chr2242592492242592508+intron-Distal5.4533612.41646HepG2DGCR8
chr2242577299242577358+intron-Distal3.562443.92966HepG2GTF2F1
chr2242598113242598157+intron-Distal4.029843.74583HepG2PTBP1
chr2242590765242590820+intron-Distal,intron-Proximal3.359034.25688HepG2TIAL1
chr2242597327242597438+intron-Distal3.210757.37913HepG2RBFOX2
chr2242594635242594656+intron-Distal,intron-Proximal3.104393.13737HepG2RBM5
chr2242595707242595794+intron-Distal4.2929921.82137HepG2DDX59
chr2242610893242610960+intron-Distal,intron-Proximal3.367515.59104K562BUD13
chr2242591077242591169+intron-Distal3.629003.98726HepG2RBFOX2
chr2242577315242577374+intron-Distal4.823077.21143HepG2EFTUD2
chr2242597359242597450+intron-Distal4.589725.19780K562NONO
chr2242608529242608586+intron-Distal4.777137.49770HepG2HNRNPC
chr2242595821242595874+intron-Distal4.0565812.67487HepG2DDX59
chr2242595874242595917+intron-Distal3.209666.98619HepG2DDX59
chr2242608191242608237+intron-Distal,intron-Proximal4.214967.08156K562PRPF8
chr2242596012242596064+intron-Distal3.847905.96063HepG2DDX59
chr2242604974242605061+intron-Distal3.9178210.86412HepG2HNRNPM
chr2242591098242591170+intron-Distal3.420983.51962K562RBFOX2
chr2242592789242592881+intron-Distal,intron-Proximal4.375385.04868K562HNRNPM
chr2242577284242577376+intron-Distal5.9747419.38852HepG2PRPF4
chr2242592458242592541+intron-Distal5.653739.81920K562DGCR8
chr2242611318242611356+intron-Distal3.949413.24881HepG2SRSF1
chr2242611471242611519+intron-Distal,intron-Proximal3.340795.52038HepG2RBM5
chr2242595411242595493+intron-Distal3.2612811.00357HepG2DDX59
chr2242592426242592492+intron-Distal4.0314813.31141HepG2DGCR8
chr2242592508242592549+intron-Distal4.4841610.26235HepG2DGCR8
chr2242597150242597212+intron-Distal3.291957.74625HepG2PTBP1
chr2242611551242611596+intron-Proximal4.322574.22551K562SF3B4
chr2242610863242610899+intron-Proximal4.556758.30573K562AQR
chr2242607506242607554+intron-Proximal4.1428210.64959HepG2SF3A3
chr2242592834242592858+intron-Proximal4.626016.05374HepG2SF3B4
chr2242611543242611603+intron-Proximal4.0885418.16994HepG2SF3A3
chr2242610864242610905+intron-Proximal4.292024.62179HepG2HNRNPK
chr2242610198242610235+intron-Proximal3.154265.76569HepG2PRPF8
chr2242611525242611594+intron-Proximal4.7695343.01524HepG2RBM5
chr2242607897242607953+intron-Proximal4.530657.56784HepG2SF3B4
chr2242610094242610141+intron-Proximal4.399136.85708HepG2SF3A3
chr2242590552242590565+intron-Proximal3.807397.89388HepG2PRPF8
chr2242590526242590552+intron-Proximal4.269249.70941HepG2PRPF8
chr2242610634242610709+intron-Proximal4.7138215.16631HepG2SF3B4
chr2242610861242610908+intron-Proximal3.5939911.70342HepG2PPIG
chr2242592835242592879+intron-Proximal3.723703.07008K562NONO
chr2242611545242611586+intron-Proximal5.181376.22530K562AQR
chr2242606272242606304+intron-Proximal3.568744.28981HepG2RBM22
chr2242594090242594138+intron-Proximal4.564206.27794HepG2SF3A3
chr2242610088242610136+intron-Proximal5.6059411.67810HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATG4B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATG4B is not available on ENCORE database.

  • 69 RBPs can affect the levels of ATG4B.  








The Knockdown/knockout RNA-Seq assay for ATG4B is not available on ENCORE database.





69 RBPs can affect the gene expression of ATG4B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATG4BENSG00000168397.122408.251603326.26020-0.465903.103402.54430HepG2AKAP1
ATG4BENSG00000168397.122105.272002752.00820-0.386502.674901.90280HepG2ASCC1
ATG4BENSG00000168397.123888.223003212.453000.275302.624501.95370HepG2AUH
ATG4BENSG00000168397.122866.961801668.952500.780506.894905.37790HepG2BCCIP
ATG4BENSG00000168397.122995.450201556.066600.9448019.4234018.05240HepG2BOP1
ATG4BENSG00000168397.123403.940902568.816600.406002.680401.72470HepG2CCAR1
ATG4BENSG00000168397.121853.790401483.496900.321402.558801.58370HepG2YBX3
ATG4BENSG00000168397.121171.110901652.06000-0.496403.054501.60350HepG2CSTF2T
ATG4BENSG00000168397.122051.226102629.60790-0.358405.553904.42440HepG2DDX19B
ATG4BENSG00000168397.123743.577502737.721700.451303.661002.95870HepG2DDX6
ATG4BENSG00000168397.121958.390201404.887700.479103.119302.08090HepG2DHX30
ATG4BENSG00000168397.122123.079801456.551800.543504.394703.52430HepG2DNAJC21
ATG4BENSG00000168397.121948.214601443.880400.432104.602003.79680HepG2DNAJC2
ATG4BENSG00000168397.121560.714201998.44030-0.356702.348001.49630HepG2EEF2
ATG4BENSG00000168397.123899.949502630.870700.567805.853505.00850HepG2EIF2S1
ATG4BENSG00000168397.121170.899701622.10360-0.470203.173002.21190HepG2EIF3D
ATG4BENSG00000168397.121838.358202778.29820-0.595809.612008.07800HepG2EWSR1
ATG4BENSG00000168397.122263.767001619.279000.483303.165102.48530HepG2GPKOW
ATG4BENSG00000168397.122499.742001649.957700.5993014.4470012.98210HepG2HNRNPF
ATG4BENSG00000168397.122575.817601545.314000.737009.665708.56950HepG2HNRNPLL
ATG4BENSG00000168397.121585.025001982.43410-0.322802.440101.54550HepG2HNRNPM
ATG4BENSG00000168397.122517.043301624.732700.6314011.342909.97260HepG2IGF2BP1
ATG4BENSG00000168397.123774.670602765.928700.448504.293703.46870HepG2IGF2BP2
ATG4BENSG00000168397.122306.932602951.64010-0.355502.173801.61130HepG2MATR3
ATG4BENSG00000168397.121229.712001697.54720-0.465102.342001.37140HepG2METAP2
ATG4BENSG00000168397.122983.998202511.263400.248702.732101.97310HepG2NOL12
ATG4BENSG00000168397.122340.041001370.266900.7720011.7993010.35540HepG2NSUN2
ATG4BENSG00000168397.122067.320602860.70250-0.468609.966808.92910HepG2PCBP1
ATG4BENSG00000168397.122164.174601449.281000.578407.350806.19160HepG2PPIL4
ATG4BENSG00000168397.122510.006602911.01590-0.213802.480001.95750HepG2PTBP1
ATG4BENSG00000168397.123491.659902397.274700.542408.328107.36820HepG2PUF60
ATG4BENSG00000168397.124328.288003152.394800.457207.961006.98530HepG2QKI
ATG4BENSG00000168397.12799.026901720.98930-1.106906.745305.66920HepG2RAVER1
ATG4BENSG00000168397.122266.972202861.11700-0.335802.405501.77270HepG2RBM25
ATG4BENSG00000168397.122561.067703017.42850-0.236602.982702.34540HepG2RECQL
ATG4BENSG00000168397.122605.741701777.477700.551806.239705.27140HepG2RPLP0
ATG4BENSG00000168397.122299.185401691.676100.442602.469101.57630HepG2RPS10
ATG4BENSG00000168397.122413.284701447.019100.737809.244308.17550HepG2SAFB2
ATG4BENSG00000168397.122990.954602298.742500.379707.153606.10910HepG2SLBP
ATG4BENSG00000168397.122527.223303481.95970-0.462306.373405.69780HepG2SRFBP1
ATG4BENSG00000168397.121861.978703163.27550-0.7646026.8385025.69660HepG2SRSF1
ATG4BENSG00000168397.122221.513801621.044900.454508.511407.40530HepG2SRSF7
ATG4BENSG00000168397.121859.066102573.58400-0.4692010.106109.16740HepG2SRSF9
ATG4BENSG00000168397.122369.912703426.04800-0.531703.078201.72530HepG2SSRP1
ATG4BENSG00000168397.121713.374202843.56820-0.7309015.1686014.01210HepG2TAF15
ATG4BENSG00000168397.122024.795001506.387000.426604.140503.27560HepG2TARDBP
ATG4BENSG00000168397.122050.880501578.668800.377404.570003.96130HepG2TIAL1
ATG4BENSG00000168397.122624.086101593.035600.7199015.7717014.57900HepG2TRIM56
ATG4BENSG00000168397.121693.795802458.10410-0.537304.008303.25830HepG2U2AF1
ATG4BENSG00000168397.121311.62070964.813700.442903.077102.27760HepG2UCHL5
ATG4BENSG00000168397.122402.698101495.287800.684102.432401.49450HepG2UPF2
ATG4BENSG00000168397.122365.811301607.962600.557004.910303.95330HepG2XRN2
ATG4BENSG00000168397.12840.38750631.256600.412703.716602.14950K562BCCIP
ATG4BENSG00000168397.12696.72400504.101700.466802.856401.92830K562EFTUD2
ATG4BENSG00000168397.12506.51130369.135700.456303.180202.32900K562EIF3G
ATG4BENSG00000168397.12851.50800641.267000.409003.045802.18640K562EIF4A3
ATG4BENSG00000168397.12194.93190307.98150-0.659903.222202.45050K562G3BP2
ATG4BENSG00000168397.12832.29290599.621300.472903.952003.25400K562HNRNPC
ATG4BENSG00000168397.12751.88950477.527800.654807.106305.73290K562MAGOH
ATG4BENSG00000168397.121054.36860807.294700.385103.629602.70610K562POLR2G
ATG4BENSG00000168397.12748.68190537.655500.477603.620002.56690K562PSIP1
ATG4BENSG00000168397.12616.47980463.970100.409903.068502.37330K562PTBP1
ATG4BENSG00000168397.12865.326301094.70670-0.339201.983401.50910K562PUS1
ATG4BENSG00000168397.12697.41530444.731400.649006.219604.89460K562RBM22
ATG4BENSG00000168397.12618.93230468.046200.403002.499401.46820K562NELFE
ATG4BENSG00000168397.12766.46270499.604200.617304.332503.30560K562RPS19
ATG4BENSG00000168397.12498.61400320.221700.638805.866304.58850K562SF3B4
ATG4BENSG00000168397.12655.45180465.150800.494703.557302.35380K562SRFBP1
ATG4BENSG00000168397.12843.00000454.878400.8900010.604909.23280K562SRSF1
ATG4BENSG00000168397.12665.18120460.295500.531102.484801.81200K562TARDBP
ATG4BENSG00000168397.12699.52500444.025700.655606.830705.45430K562TIA1
ATG4BENSG00000168397.12605.95320435.889600.475103.320002.10340K562TRA2A
ATG4BENSG00000168397.121314.820401073.866500.292002.531201.84300K562UPF1
ATG4BENSG00000168397.121184.149001483.36860-0.325002.636301.79740K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATG4B is not available on ENCORE database.





39 RBPs can affect the splicing of ATG4B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATG4BENSG00000168397.12chr2+2425912982425913892425906782425907502425927212425927840.079000.000210.02474includedHepG2G3BP1
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.169000.000110.00331excludedK562SRSF1
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.065000.000580.09537excludedK562FTO
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.328000.000000.00000excludedK562SF3B4
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.149000.002010.03681excludedK562SF3B4
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.143000.000430.01954excludedK562PRPF8
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.114000.000990.03733excludedK562PRPF8
SEATG4BENSG00000168397.12chr2+242607557242607636242606059242606253242607954242608100-0.085000.000000.00002excludedHepG2U2AF1
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.095000.000000.00006excludedHepG2U2AF1
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242606059242606253-0.085000.003610.05862excludedHepG2U2AF1
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.125000.000000.00062excludedHepG2PRPF8
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.096000.000320.07470excludedK562WDR43
SEATG4BENSG00000168397.12chr2+2426072422426074102426060592426062532426075572426076360.458000.000000.00000includedHepG2HNRNPK
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242606059242606253-0.066000.001090.02894excludedHepG2HNRNPK
SEATG4BENSG00000168397.12chr2+2425912982425913892425906782425907502425927212425927840.102000.000190.02094includedHepG2TBRG4
SEATG4BENSG00000168397.12chr2+242607557242607636242606059242606253242607954242608100-0.056000.000010.00015excludedHepG2U2AF2
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.104000.000000.00000excludedHepG2U2AF2
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.060000.002390.02918excludedHepG2U2AF2
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.115000.000020.00314excludedHepG2AKAP1
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.095000.001810.02015excludedK562AQR
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.155000.000000.00000excludedK562AQR
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.098000.000290.02813excludedHepG2DDX3X
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.183000.000020.03244excludedK562KHDRBS1
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.124000.000240.00512excludedK562PUS1
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.086000.000550.07331excludedK562LARP4
SEATG4BENSG00000168397.12chr2+2425912982425913892425906782425907502425927212425927840.087000.000620.02975includedHepG2MATR3
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.134000.000000.00002excludedHepG2LARP4
SEATG4BENSG00000168397.12chr2+2425927212425927842425906782425907502425929262425930250.102000.000160.03435includedHepG2RBM15
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.091000.000050.02590excludedK562PPIL4
SEATG4BENSG00000168397.12chr2+242592926242593117242590678242590750242593960242594417-0.090000.000060.00244excludedHepG2SRSF1
SEATG4BENSG00000168397.12chr2+242590636242590750242590424242590526242592926242593025-0.054000.001730.04694excludedHepG2SF3A3
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.081000.000000.00004excludedHepG2SF3A3
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.098000.000670.07181excludedHepG2SSB
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.152000.000000.00004excludedHepG2IGF2BP3
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.115000.000010.00153excludedHepG2TIAL1
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.088000.000310.03518excludedHepG2SUPV3L1
SEATG4BENSG00000168397.12chr2+242607557242607636242606059242606253242607954242608100-0.114000.000000.00000excludedHepG2PCBP1
SEATG4BENSG00000168397.12chr2+242607578242607636242606059242606253242607954242608275-0.105000.000070.00543excludedHepG2SF3B4
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.113000.000040.00324excludedHepG2SF3B4
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.058000.000010.00102excludedHepG2SF3B4
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.170000.002010.03513excludedK562U2AF2
SEATG4BENSG00000168397.12chr2+2426081962426084002426079542426081002426101402426101970.200000.000570.02415includedK562TARDBP
SEATG4BENSG00000168397.12chr2+2425927212425927842425906782425907502425929262425930250.247000.000090.00559includedK562TARDBP
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.107000.001910.06184excludedK562HNRNPU
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.075000.000010.00278excludedK562CPSF6
SEATG4BENSG00000168397.12chr2+242592926242593025242590678242590750242593960242594062-0.093000.000840.03522excludedK562SF3B1
SEATG4BENSG00000168397.12chr2+2426072422426074102426060592426062532426075572426076360.430000.000300.01844includedK562HNRNPK
SEATG4BENSG00000168397.12chr2+242594685242594758242593960242594062242598522242598602-0.065000.000350.07151excludedHepG2XRCC6
SEATG4BENSG00000168397.12chr2+242607557242607636242606059242606253242607954242608100-0.071000.000010.00114excludedHepG2SRSF9
SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.098000.001050.09827excludedHepG2KHSRP
A3SSATG4BENSG00000168397.12chr2+242610726242610984242610742242610984242610155242610197-0.060000.000030.00468shorterHepG2SRSF1
A3SSATG4BENSG00000168397.12chr2+2426060422426062532426060592426062532425985222425986020.085000.000030.00030longerK562AQR
A5SSATG4BENSG00000168397.12chr2+242610726242610966242610726242610820242611605242612007-0.140000.000010.00538shorterHepG2SUPV3L1
A5SSATG4BENSG00000168397.12chr2+242610726242610966242610726242610820242611605242612007-0.111000.000000.00045shorterHepG2DDX3X
A5SSATG4BENSG00000168397.12chr2+2426107262426109662426107262426108202426116052426120070.421000.000000.00000longerHepG2HNRNPK
A5SSATG4BENSG00000168397.12chr2+242610726242610966242610726242610820242611605242612007-0.124000.000000.00008shorterHepG2AKAP1
A5SSATG4BENSG00000168397.12chr2+2426107262426109662426107262426108202426116052426120070.161000.000020.01073longerHepG2G3BP1
A5SSATG4BENSG00000168397.12chr2+2426107262426109662426107262426108202426116052426132720.188000.000000.00000longerHepG2QKI
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.153000.000320.067421includedK562KHDRBS1
MXEATG4BENSG00000168397.12chr2+2425912982425913892425927212425927842425906782425907502425929262425930250.084000.000880.026411includedHepG2MATR3
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.121000.000000.000001includedHepG2FTO
MXEATG4BENSG00000168397.12chr2+2425906362425907502425929262425930252425904242425905262425939602425940620.268000.009210.094861includedK562U2AF1
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.081000.000610.013591includedK562U2AF1
MXEATG4BENSG00000168397.12chr2+2425906362425907502425929262425930252425904242425905262425939602425940620.163000.000100.002961includedK562SRSF1
MXEATG4BENSG00000168397.12chr2+242590678242590750242592926242593025242590424242590526242593960242594062-0.111000.000020.007102includedHepG2SMNDC1
MXEATG4BENSG00000168397.12chr2+2425912982425913892425927212425927842425906782425907502425929262425930250.111000.012440.075531includedK562AQR
MXEATG4BENSG00000168397.12chr2+2425906362425907502425929262425930252425904242425905262425939602425940620.190000.000000.000001includedK562AQR
MXEATG4BENSG00000168397.12chr2+2425906362425907502425929262425930252425904242425905262425939602425940620.314000.000260.005481includedK562U2AF2
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.076000.001820.025721includedK562U2AF2
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.099000.002890.019581includedHepG2U2AF2
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.169000.000040.039711includedK562SLBP
MXEATG4BENSG00000168397.12chr2+242590678242590750242592926242593025242590424242590526242593960242594062-0.068000.000090.031352includedHepG2CDC40
MXEATG4BENSG00000168397.12chr2+242590678242590750242592926242593025242590424242590526242593960242594062-0.094000.000610.034692includedHepG2DROSHA
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.086000.000030.003471includedK562TAF15
MXEATG4BENSG00000168397.12chr2+242590678242590750242592926242593025242590424242590526242593960242594062-0.108000.000720.086372includedHepG2DDX52
MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.114000.001730.043361includedK562PPIL4
MXEATG4BENSG00000168397.12chr2+2425912982425913892425927212425927842425906782425907502425929262425930250.105000.002000.081561includedHepG2LARP4
MXEATG4BENSG00000168397.12chr2+2425906362425907502425929262425930252425904242425905262425939602425940620.378000.000000.000021includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATG4B is not avaliable on ENCORE database.