DDX39A

General Information

Gene Name       : DDX39A
Gene ID             : ENSG00000123136.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DDX39A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DDX39AENSG00000123136.1425.6876.9651.32ENCSR000AEF
HepG2DDX39AENSG00000123136.1480.6640.7360.69ENCSR985KAT
K562DDX39AENSG00000123136.14128.1794.04111.10ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DDX39A is not avaliable on ENCORE database.



Proteins bound to RNA
  • DDX39A RNA is bound by 34 proteins.  







eCLIP assay for DDX39A is not avaliable on ENCORE database.





34 proteins are bound to DDX39A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191452011314520160-3'-UTR,CDS,intron-Distal,intron-Proximal3.3693020.69747K562PUM1
chr191452016514520223-3'-UTR,CDS,intron-Distal3.0817012.15268K562ZNF622
chr191452011614520149-3'-UTR,CDS,intron-Distal3.227428.98598K562UCHL5
chr191451996514519998-3'-UTR,CDS,intron-Distal,intron-Proximal3.623119.27256K562BUD13
chr191452063014520649-3'-UTR,CDS,intron-Distal,intron-Proximal3.0864911.51636K562ZNF622
chr191451998914519996-3'-UTR,CDS,intron-Distal3.097324.94718HepG2PPIG
chr191451969614519764-3'-UTR,CDS,intron-Distal,intron-Proximal3.8435417.26411K562PUM1
chr191452033514520367-3'-UTR,CDS,intron-Distal,intron-Proximal3.284797.41391K562RBM15
chr191452020114520224-3'-UTR,CDS,intron-Distal3.691796.19583K562RBM15
chr191452034714520397-3'-UTR,CDS,intron-Distal,intron-Proximal3.227086.56666K562YBX3
chr191451996714519995-3'-UTR,CDS,intron-Distal3.224918.82209K562UCHL5
chr191452014914520218-3'-UTR,CDS,intron-Distal3.4702413.76601K562UCHL5
chr191452401614524036-3'-UTR,CDS,intron-Distal,intron-Proximal3.8262810.82249K562UCHL5
chr191452011314520193-3'-UTR,CDS,intron-Distal,intron-Proximal5.316839.45527HepG2PABPN1
chr191452011414520196-3'-UTR,CDS,intron-Distal,intron-Proximal5.093087.86337HepG2GRWD1
chr191452063714520678-3'-UTR,CDS,intron-Distal,intron-Proximal3.315255.87296K562DDX24
chr191451966514519693-3'-UTR,intron-Distal3.746827.79255K562UCHL5
chr191451996714519997-3'-UTR,CDS,intron-Distal,intron-Proximal3.982823.19682HepG2PABPN1
chr191451997114519996-3'-UTR,CDS,intron-Distal3.5153910.90939K562PUM1
chr191451997114519989-3'-UTR,CDS,intron-Distal3.435965.30777HepG2PPIG
chr191452976214529853-5'-UTR,intron-Distal4.438445.19780K562NONO
chr191452984814529999-5'-UTR,intron-Distal,intron-Proximal5.434968.11443HepG2FAM120A
chr191452987414530003-5'-UTR,intron-Distal,intron-Proximal3.333677.25132K562EWSR1
chr191452984814529986-5'-UTR,intron-Distal,intron-Proximal3.4171710.28834K562CSTF2T
chr191452989114529995-5'-UTR,intron-Distal,intron-Proximal4.007694.75844K562FASTKD2
chr191453008014530096-5'-UTR,intron-Distal3.8797411.85892K562UCHL5
chr191452989714529997-5'-UTR,intron-Distal,intron-Proximal4.125273.94684HepG2CSTF2T
chr191452986214529926-5'-UTR,intron-Distal,intron-Proximal3.412053.51682HepG2RBFOX2
chr191453006814530128-5'-UTR,intron-Distal3.192936.94943K562SRSF1
chr191452990114529995-5'-UTR,intron-Distal,intron-Proximal6.3570714.89609K562GTF2F1
chr191453006414530136-5'-UTR,intron-Distal,intron-Proximal4.367474.28193HepG2AQR
chr191452981114529938-5'-UTR,intron-Distal,intron-Proximal4.5294013.77594K562HNRNPM
chr191452985414529957-5'-UTR,intron-Distal,intron-Proximal3.307539.32791K562DROSHA
chr191452990414529970-5'-UTR,intron-Distal,intron-Proximal4.287885.98353HepG2EFTUD2
chr191453009614530133-5'-UTR,intron-Distal3.8803912.10505K562UCHL5
chr191452984914530028-5'-UTR,intron-Distal,intron-Proximal3.509237.91169HepG2PRPF4
chr191452194314521980-CDS,intron-Distal,intron-Proximal3.3372710.66468K562ZNF622
chr191452227814522332-CDS,intron-Distal,intron-Proximal3.2399711.50716K562PRPF8
chr191452177814521862-CDS,intron-Distal,intron-Proximal3.2560214.78904K562BUD13
chr191452074214520779-CDS,intron-Distal,intron-Proximal4.337905.21007K562SRSF1
chr191452105814521126-CDS,intron-Distal,intron-Proximal4.772787.48847HepG2GRWD1
chr191452178414521840-CDS,intron-Distal,intron-Proximal3.2449911.89551K562DDX24
chr191452344214523491-CDS,intron-Distal,intron-Proximal3.162323.66193HepG2PPIG
chr191452394214524006-CDS,intron-Distal,intron-Proximal3.0041014.38894K562ZNF622
chr191452341314523432-CDS,intron-Distal,intron-Proximal3.712024.14015K562DDX24
chr191452110114521209-CDS,intron-Distal,intron-Proximal4.1900642.66788K562SF3B4
chr191452185814521939-CDS,intron-Distal,intron-Proximal3.2025718.67909K562UCHL5
chr191452229814522332-CDS,intron-Distal,intron-Proximal3.551123.86355HepG2PPIG
chr191452179014521842-CDS,intron-Distal,intron-Proximal4.038728.98325HepG2PPIG
chr191452378314523839-CDS,intron-Distal,intron-Proximal4.836036.81564HepG2PRPF8
chr191452383914523887-CDS,intron-Distal4.3899520.37836K562RBM15
chr191452227214522334-CDS,intron-Distal,intron-Proximal6.9711623.26545HepG2PRPF8
chr191452110814521205-CDS,intron-Distal,intron-Proximal3.6768821.59628K562EFTUD2
chr191452076514520825-CDS,intron-Distal,intron-Proximal5.3468218.37745K562RBM15
chr191452239414522434-CDS,intron-Distal,intron-Proximal3.737579.06608K562AQR
chr191452328214523361-CDS,intron-Distal,intron-Proximal6.7611721.35451K562AQR
chr191452177214521803-CDS,intron-Distal,intron-Proximal3.085707.59392K562EFTUD2
chr191452342114523445-CDS,intron-Distal,intron-Proximal3.375248.41541K562RBM15
chr191452386714523921-CDS,intron-Distal4.251358.83457HepG2GRWD1
chr191452230914522343-CDS,intron-Distal,intron-Proximal3.015247.99225K562ZNF622
chr191452382214523839-CDS,intron-Distal,intron-Proximal3.5725420.80510K562ZNF622
chr191452383814523867-CDS,intron-Distal3.546626.58996HepG2GRWD1
chr191452179814521841-CDS,intron-Distal,intron-Proximal3.515505.35682HepG2GRWD1
chr191452341914523491-CDS,intron-Distal,intron-Proximal3.149166.95257K562GRWD1
chr191452175514521803-CDS,intron-Distal,intron-Proximal3.5045611.70812K562SF3B4
chr191452178414521815-CDS,intron-Distal,intron-Proximal4.700685.05356HepG2PRPF8
chr191452395314524010-CDS,intron-Distal,intron-Proximal3.569038.91560K562MTPAP
chr191452230314522334-CDS,intron-Distal,intron-Proximal4.326918.03807K562RBM15
chr191452109914521152-CDS,intron-Distal,intron-Proximal3.4131418.78561K562BUD13
chr191452187114521963-CDS,intron-Distal,intron-Proximal3.511646.49566K562SRSF1
chr191452341614523480-CDS,intron-Distal,intron-Proximal3.073845.39456HepG2GRWD1
chr191452188514521949-CDS,intron-Distal,intron-Proximal4.859806.92104HepG2GRWD1
chr191452388714523916-CDS,intron-Distal4.0839212.69178K562RBM15
chr191452392314524008-CDS,intron-Distal,intron-Proximal3.054416.12838K562GRWD1
chr191452111014521177-CDS,intron-Distal,intron-Proximal3.6850618.50738K562AQR
chr191452377314523839-CDS,intron-Distal,intron-Proximal3.9246311.33351K562RBM15
chr191452383914523863-CDS,intron-Distal3.3386417.41811K562ZNF622
chr191452113514521213-CDS,intron-Distal,intron-Proximal3.789748.33057K562SMNDC1
chr191452345114523491-CDS,intron-Distal,intron-Proximal3.5287020.27299K562ZNF622
chr191452167814521736-intron-Distal,intron-Proximal3.700719.47061K562SF3B4
chr191452095714521014-intron-Distal,intron-Proximal5.7876024.71289K562RBM15
chr191452085814520947-intron-Distal,intron-Proximal3.311218.44114K562RBFOX2
chr191452211714522168-intron-Distal3.309143.48113K562HNRNPM
chr191452101114521028-intron-Distal,intron-Proximal3.213587.19667HepG2PRPF8
chr191452175814521784-intron-Distal,intron-Proximal5.602445.68502HepG2PRPF8
chr191452414014524192-intron-Distal3.871793.40229HepG2CSTF2T
chr191452213014522172-intron-Distal4.218104.07948K562RBFOX2
chr191452088214520935-intron-Distal,intron-Proximal3.231108.44637K562RBM15
chr191452138514521413-intron-Distal,intron-Proximal4.873268.66757K562DDX24
chr191452211814522164-intron-Distal3.122693.06764K562U2AF1
chr191452115214521170-intron-Distal,intron-Proximal3.5431817.48172K562BUD13
chr191452115114521205-intron-Distal,intron-Proximal5.119428.11845HepG2SF3A3
chr191452413414524193-intron-Distal,intron-Proximal3.043856.68715K562DROSHA
chr191452213014522154-intron-Distal5.700716.47067K562SF3B4
chr191452424714524311-intron-Distal4.103453.76295K562LIN28B
chr191452167314521729-intron-Distal,intron-Proximal3.075123.40600K562XRN2
chr191452175814521765-intron-Distal,intron-Proximal5.5058836.69527K562AQR
chr191452414014524207-intron-Distal4.160294.36329HepG2PRPF4
chr191452093914520978-intron-Distal,intron-Proximal3.174026.93483HepG2PRPF8
chr191452368514523694-intron-Distal5.348127.23707K562RBM15
chr191452087314520938-intron-Distal,intron-Proximal3.2648015.28426K562BUD13
chr191452165914521696-intron-Distal3.530153.80752K562AKAP8L
chr191452095114521006-intron-Distal,intron-Proximal3.574304.63302K562HNRNPM
chr191452097814521011-intron-Distal,intron-Proximal3.9222913.31241HepG2PRPF8
chr191452369714523737-intron-Distal,intron-Proximal4.7863111.87378K562RBM15
chr191452414514524217-intron-Distal4.209923.01994HepG2GTF2F1
chr191452206114522117-intron-Distal,intron-Proximal3.776145.37641K562HNRNPM
chr191452413114524210-intron-Distal,intron-Proximal4.587614.92659K562FAM120A
chr191452176514521793-intron-Distal,intron-Proximal5.2435335.26789K562AQR
chr191452168114521721-intron-Distal,intron-Proximal3.7147510.14734K562BUD13
chr191452096514521012-intron-Distal,intron-Proximal3.8966425.31738K562AQR
chr191452088814520942-intron-Distal,intron-Proximal3.554644.31749K562TRA2A
chr191452141214521442-intron-Distal,intron-Proximal3.126967.52050K562AQR
chr191452412814524201-intron-Distal,intron-Proximal3.130326.79607K562CSTF2T
chr191452088214521001-intron-Distal,intron-Proximal3.5113721.08170K562PRPF8
chr191452361114523650-intron-Distal,intron-Proximal5.2210712.12312K562RBM15
chr191452413314524190-intron-Distal,intron-Proximal4.029526.26242K562RBFOX2
chr191452137214521475-intron-Distal,intron-Proximal4.8055729.13116K562SF3B4
chr191452415214524211-intron-Distal3.075265.45129K562GEMIN5
chr191452413414524208-intron-Distal,intron-Proximal3.328443.58403K562EWSR1
chr191452991514529982-intron-Distal,intron-Proximal3.5391510.54909K562EFTUD2
chr191452429514524364-intron-Distal4.747517.48569K562GTF2F1
chr191452117014521207-intron-Distal,intron-Proximal3.4265513.94688K562BUD13
chr191452430614524365-intron-Distal3.873205.79195K562CSTF2T
chr191451978414519799-intron-Distal,intron-Proximal4.747976.11702K562SF3B4
chr191452365014523660-intron-Distal5.8574012.50001K562RBM15
chr191452179614521801-intron-Distal,intron-Proximal5.2165633.86141K562AQR
chr191452131114521348-intron-Distal,intron-Proximal3.749158.08874K562SF3B4
chr191452088414520943-intron-Distal,intron-Proximal3.081235.88559K562HNRNPM
chr191452162714521728-intron-Distal,intron-Proximal3.3881915.73431K562PRPF8
chr191452101214521028-intron-Distal,intron-Proximal3.6426117.37203K562AQR
chr191452115514521232-intron-Distal,intron-Proximal4.134997.23600HepG2SF3B4
chr191452117114521217-intron-Distal,intron-Proximal3.647717.26133HepG2PRPF8
chr191452413114524232-intron-Distal,intron-Proximal4.8893415.34826K562GTF2F1
chr191452366014523685-intron-Distal5.9863313.20785K562RBM15
chr191452993914529984-intron-Distal,intron-Proximal3.670624.34492K562XRN2
chr191452414314524177-intron-Distal5.081818.06523K562UCHL5
chr191452082514520854-intron-Distal,intron-Proximal4.373448.37444K562RBM15
chr191452430914524379-intron-Distal3.768163.26022HepG2PRPF4
chr191452141214521480-intron-Distal,intron-Proximal3.376859.57774K562EFTUD2
chr191452088414520942-intron-Distal,intron-Proximal3.862285.55843HepG2RBFOX2
chr191452096814521000-intron-Distal,intron-Proximal3.623684.80912HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DDX39A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DDX39A is not available on ENCORE database.

  • 119 RBPs can affect the levels of DDX39A.  








The Knockdown/knockout RNA-Seq assay for DDX39A is not available on ENCORE database.





119 RBPs can affect the gene expression of DDX39A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DDX39AENSG00000123136.10200.21140358.70240-0.841306.078204.55290HepG2AATF
DDX39AENSG00000123136.10760.85440544.340700.483005.797004.97990HepG2ACO1
DDX39AENSG00000123136.10627.14700903.59840-0.526907.025006.01220HepG2AUH
DDX39AENSG00000123136.10299.74500604.57770-1.012209.670608.11830HepG2BCLAF1
DDX39AENSG00000123136.10177.87850365.89410-1.040508.766207.77320HepG2BOP1
DDX39AENSG00000123136.10241.60310361.59840-0.581703.879602.43130HepG2BUD13
DDX39AENSG00000123136.10135.79790290.39490-1.096608.532807.28330HepG2CALR
DDX39AENSG00000123136.10116.1652041.833701.473304.397801.94230HepG2CDC40
DDX39AENSG00000123136.10441.77960318.879900.470202.508801.76760HepG2CIRBP
DDX39AENSG00000123136.10178.15910367.40290-1.044207.038904.54430HepG2CSTF2T
DDX39AENSG00000123136.10235.51710395.44430-0.747605.509604.58730HepG2DDX21
DDX39AENSG00000123136.10225.11850387.23240-0.782506.084704.73530HepG2DDX24
DDX39AENSG00000123136.10459.18090640.10600-0.479203.006701.66490HepG2DDX27
DDX39AENSG00000123136.10367.39250518.16950-0.496103.315501.78760HepG2DDX28
DDX39AENSG00000123136.10503.71340684.25130-0.441902.235501.53380HepG2DDX55
DDX39AENSG00000123136.10212.94380381.44280-0.841002.991301.97670HepG2DDX59
DDX39AENSG00000123136.10440.40410321.111900.455702.200201.37630HepG2EEF2
DDX39AENSG00000123136.10156.25780364.36540-1.221509.677207.72020HepG2AGO1
DDX39AENSG00000123136.10521.16640354.568200.555603.181602.49660HepG2EIF4A3
DDX39AENSG00000123136.10545.94870345.282200.660901.993301.40300HepG2EIF4B
DDX39AENSG00000123136.10549.77540759.93810-0.467004.866903.80740HepG2EIF4G1
DDX39AENSG00000123136.10488.79400727.97020-0.574704.733203.68570HepG2EIF4G2
DDX39AENSG00000123136.10310.28370418.10590-0.430302.342401.33410HepG2ESF1
DDX39AENSG00000123136.10802.327701037.50180-0.370904.107103.39960HepG2ETF1
DDX39AENSG00000123136.10264.11190376.98070-0.513302.993501.80670HepG2FASTKD2
DDX39AENSG00000123136.10331.21160569.47740-0.781906.736004.86290HepG2FKBP4
DDX39AENSG00000123136.10148.96060336.49790-1.175704.632303.32450HepG2FTO
DDX39AENSG00000123136.10789.65060357.840101.1418014.2388012.79000HepG2FXR1
DDX39AENSG00000123136.10328.28180232.073000.500302.415801.58400HepG2GEMIN5
DDX39AENSG00000123136.10592.89660409.267900.534603.294502.17740HepG2GNB2L1
DDX39AENSG00000123136.10168.82710380.74000-1.173309.378308.24490HepG2GPKOW
DDX39AENSG00000123136.10317.84160519.70200-0.709408.613807.00400HepG2HDGF
DDX39AENSG00000123136.10474.93300707.91460-0.575904.675303.51250HepG2HNRNPA2B1
DDX39AENSG00000123136.10391.35260653.14170-0.7389010.289409.01950HepG2HNRNPF
DDX39AENSG00000123136.10803.45590336.195001.2568017.9619016.33780HepG2HNRNPK
DDX39AENSG00000123136.10853.85840701.662000.283102.726402.05720HepG2HNRNPL
DDX39AENSG00000123136.10144.65940363.34980-1.3287011.7904010.60660HepG2HNRNPLL
DDX39AENSG00000123136.10471.83780643.15390-0.446902.928102.18480HepG2IGF2BP1
DDX39AENSG00000123136.10445.09590358.421600.312402.166101.50830HepG2ILF2
DDX39AENSG00000123136.10626.27070401.035900.643005.246303.68920HepG2LARP7
DDX39AENSG00000123136.10768.32960357.965401.1018013.0087011.62620HepG2MAGOH
DDX39AENSG00000123136.10842.70010359.953401.2271014.6174013.25040HepG2MATR3
DDX39AENSG00000123136.10181.96690370.63290-1.026303.995302.81990HepG2MTPAP
DDX39AENSG00000123136.10195.19970331.20120-0.762805.516203.81340HepG2NAA15
DDX39AENSG00000123136.10607.17710368.419600.720705.503804.62510HepG2NCBP2
DDX39AENSG00000123136.10157.09020322.20010-1.036407.179006.01080HepG2NSUN2
DDX39AENSG00000123136.10205.03220333.83420-0.703305.587804.52900HepG2PRPF4
DDX39AENSG00000123136.10401.82200527.58090-0.392802.348001.60020HepG2PRPF8
DDX39AENSG00000123136.10482.35140335.452400.523904.233303.58830HepG2PTBP1
DDX39AENSG00000123136.10924.74750774.002100.256602.529101.95660HepG2PUM1
DDX39AENSG00000123136.10407.80420554.44930-0.443204.058403.33780HepG2PUS1
DDX39AENSG00000123136.10307.24200501.89970-0.708007.262005.96250HepG2RBM15
DDX39AENSG00000123136.10187.67410329.70980-0.813005.785304.84260HepG2RBM25
DDX39AENSG00000123136.10634.75530392.703500.692704.595903.22700HepG2RCC2
DDX39AENSG00000123136.10615.05850373.318000.720208.187107.34510HepG2NELFE
DDX39AENSG00000123136.10546.26350347.710000.651606.686405.78810HepG2RECQL
DDX39AENSG00000123136.10288.75460703.65700-1.2850014.1922012.87050HepG2RPLP0
DDX39AENSG00000123136.101498.56690428.620901.8057010.699009.30940HepG2SF3A3
DDX39AENSG00000123136.10181.37370359.62780-0.987507.682506.55750HepG2SF3B1
DDX39AENSG00000123136.10727.26540349.231401.0582018.3130017.00000HepG2SF3B4
DDX39AENSG00000123136.10506.16130699.12490-0.466005.089704.18390HepG2SLBP
DDX39AENSG00000123136.10511.88960364.411900.490204.647603.84990HepG2SMN1
DDX39AENSG00000123136.10212.61580400.15500-0.912305.056103.98970HepG2SNRNP70
DDX39AENSG00000123136.10517.04330979.39460-0.9216019.7603018.74070HepG2SRFBP1
DDX39AENSG00000123136.10435.21330651.62490-0.582304.606502.60670HepG2SRP68
DDX39AENSG00000123136.10714.38750364.529200.9706015.6122014.68450HepG2SRSF1
DDX39AENSG00000123136.10627.72790387.008300.697704.704003.36570HepG2SRSF3
DDX39AENSG00000123136.101139.26520719.909200.6621011.9372010.76200HepG2SRSF5
DDX39AENSG00000123136.10369.71030641.70480-0.7955011.3107010.06810HepG2SRSF7
DDX39AENSG00000123136.10388.60400296.570200.389802.546602.01190HepG2SRSF9
DDX39AENSG00000123136.10674.20040850.31430-0.334803.334402.78280HepG2SSB
DDX39AENSG00000123136.10413.76920271.652700.607003.417202.18200HepG2STIP1
DDX39AENSG00000123136.10334.67970681.08520-1.025108.718407.62740HepG2SUPV3L1
DDX39AENSG00000123136.10224.69270327.67330-0.544303.165302.57120HepG2TAF15
DDX39AENSG00000123136.10199.92440354.23040-0.825205.705004.71970HepG2TARDBP
DDX39AENSG00000123136.10226.28240456.46090-1.012408.526506.96800HepG2TFIP11
DDX39AENSG00000123136.10918.67040416.908501.1397015.5829014.04260HepG2U2AF1
DDX39AENSG00000123136.10560.23700402.285700.477702.606901.87110HepG2UCHL5
DDX39AENSG00000123136.10316.08700418.06080-0.403402.960402.40090HepG2ZNF622
DDX39AENSG00000123136.103522.427401968.661700.8393032.6109030.74690K562AGGF1
DDX39AENSG00000123136.102804.274802163.314300.374303.965202.74490K562AKAP8
DDX39AENSG00000123136.103652.119002048.494700.8341016.9489015.07460K562AKAP8L
DDX39AENSG00000123136.104443.209303183.860700.480706.732204.69360K562APOBEC3C
DDX39AENSG00000123136.106685.668503503.597300.932109.112708.14720K562AQR
DDX39AENSG00000123136.10556.76990738.08060-0.406702.538501.70350K562BOP1
DDX39AENSG00000123136.10719.54430973.78900-0.436503.380702.19060K562CCAR1
DDX39AENSG00000123136.10770.163001047.18110-0.443303.722802.14850K562DNAJC21
DDX39AENSG00000123136.102719.562801547.800100.813108.638706.46400K562EEF2
DDX39AENSG00000123136.102527.163001495.266300.7570010.961409.02760K562EFTUD2
DDX39AENSG00000123136.101641.58770969.507200.7597015.8819013.91730K562EIF3G
DDX39AENSG00000123136.101877.065701552.729600.273602.790901.63020K562EIF4B
DDX39AENSG00000123136.101979.913901505.046600.395505.038303.19300K562EWSR1
DDX39AENSG00000123136.10715.628801037.20470-0.535403.303801.54080K562FASTKD2
DDX39AENSG00000123136.10710.309501096.67930-0.626602.433401.38810K562FKBP4
DDX39AENSG00000123136.103160.465901793.093300.8176025.4529023.73060K562FXR1
DDX39AENSG00000123136.10216.12580770.60730-1.8341012.9775011.20280K562G3BP2
DDX39AENSG00000123136.101520.509401804.83500-0.247302.362901.31700K562GLRX3
DDX39AENSG00000123136.102182.562801411.539300.628702.856401.61490K562HNRNPA2B1
DDX39AENSG00000123136.101627.677401117.227400.542803.210102.20280K562HNRNPM
DDX39AENSG00000123136.10575.08290983.32060-0.773908.739006.16890K562KHDRBS1
DDX39AENSG00000123136.103118.816402173.919400.520607.406505.89360K562KIF1C
DDX39AENSG00000123136.10426.40660639.81550-0.585402.616601.71250K562KRR1
DDX39AENSG00000123136.102206.460501398.394000.6579010.576108.86750K562MAGOH
DDX39AENSG00000123136.102801.055702081.012700.428602.309701.35680K562MAK16
DDX39AENSG00000123136.101940.205901395.425300.475405.932404.51070K562MATR3
DDX39AENSG00000123136.103177.246202435.345100.383604.860903.59110K562MBNL1
DDX39AENSG00000123136.102579.617301707.004600.595605.093003.77380K562NAA15
DDX39AENSG00000123136.101769.799202108.35620-0.252504.193303.29580K562NSUN2
DDX39AENSG00000123136.102798.137001234.817001.180108.711806.61970K562PABPN1
DDX39AENSG00000123136.101862.547201244.066100.582103.117202.07960K562PCBP2
DDX39AENSG00000123136.101140.824602100.07420-0.8804012.2601010.51710K562PCBP3
DDX39AENSG00000123136.101035.681201610.89630-0.637309.406307.96490K562POLR2G
DDX39AENSG00000123136.102297.751601468.177800.646102.746301.32320K562PPP1R8
DDX39AENSG00000123136.103378.693301455.075401.2153027.9556025.58450K562PRPF8
DDX39AENSG00000123136.102651.240701358.692200.9643023.8872022.01450K562PTBP1
DDX39AENSG00000123136.103072.955604187.60650-0.446507.275305.48210K562PUM1
DDX39AENSG00000123136.103252.792904102.91540-0.335005.293103.94550K562PUM2
DDX39AENSG00000123136.105386.830102031.452001.4068042.2329040.06290K562PUS1
DDX39AENSG00000123136.101106.63170862.161400.360003.399201.39210K562QKI
DDX39AENSG00000123136.103746.374301979.420700.9203018.1381016.58890K562RBM15
DDX39AENSG00000123136.102155.600801302.350000.7269011.163409.30470K562RBM22
DDX39AENSG00000123136.101684.227701269.905200.407303.336701.77120K562RBM34
DDX39AENSG00000123136.101871.130501435.134900.382603.883902.59030K562SAFB
DDX39AENSG00000123136.102294.301001129.340601.022505.631003.71630K562SF1
DDX39AENSG00000123136.101588.360502080.39240-0.389305.740904.59850K562SF3A3
DDX39AENSG00000123136.101264.70530801.150400.658609.931508.26670K562SF3B4
DDX39AENSG00000123136.102265.759701376.892600.718503.201801.76260K562SFPQ
DDX39AENSG00000123136.10734.496001072.65840-0.546405.284303.50700K562SLBP
DDX39AENSG00000123136.102681.011801296.871401.047604.950303.15740K562SNRNP200
DDX39AENSG00000123136.102161.458901332.068600.6982011.9408010.47510K562SRSF1
DDX39AENSG00000123136.101424.648501833.66910-0.364103.164501.53960K562SRSF9
DDX39AENSG00000123136.102089.287701615.677300.370804.354403.31730K562SYNCRIP
DDX39AENSG00000123136.102424.858601347.930700.847109.821708.35980K562TARDBP
DDX39AENSG00000123136.101926.607501300.286400.567108.276306.74960K562TIA1
DDX39AENSG00000123136.10783.971701088.24720-0.473103.691402.60890K562TIAL1
DDX39AENSG00000123136.101777.039701276.464100.477204.649303.16550K562TRA2A
DDX39AENSG00000123136.10380.04320771.34070-1.0212016.3923014.40780K562U2AF2
DDX39AENSG00000123136.101788.424802235.53390-0.321904.898203.97260K562UPF1
DDX39AENSG00000123136.103276.275702059.774300.669503.097801.69520K562UTP18
DDX39AENSG00000123136.101341.019701912.87720-0.512406.815305.40520K562WDR3
DDX39AENSG00000123136.102658.814203947.52330-0.570203.395402.42500K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DDX39A is not available on ENCORE database.





43 RBPs can affect the splicing of DDX39A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.056000.000410.09927includedK562IGF2BP2
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.061000.000070.04623includedK562TIA1
SEDDX39AENSG00000123136.10chr19-145212321452141714520553145211461452180014521984-0.070000.000030.00107excludedHepG2U2AF1
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.085000.000000.00020includedK562AKAP8L
SEDDX39AENSG00000123136.10chr19-145203471452040914520114145202591452055314520685-0.091000.000000.00002excludedK562AQR
SEDDX39AENSG00000123136.10chr19-1452123214521417145210271452114614521800145219840.120000.000430.03259includedHepG2FTO
SEDDX39AENSG00000123136.10chr19-1452123214521417145210271452114614521800145219840.275000.000220.02408includedHepG2DDX6
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.099000.001100.09958includedHepG2SSB
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.051000.000000.00008includedK562EIF4G2
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.066000.000020.00673includedK562RBM22
SEDDX39AENSG00000123136.10chr19-1452123214521417145205531452114614521800145219840.112000.000000.00000includedK562AGGF1
SEDDX39AENSG00000123136.10chr19-1452123214521417145210721452114614521800145221980.063000.000160.03770includedK562NPM1
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.235000.000000.00000longerK562AGGF1
A3SSDDX39AENSG00000123136.10chr19-1452336214523523145233621452349014523824145240360.133000.000000.00000longerK562AGGF1
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.252000.000000.00002longerHepG2SF3A3
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.150000.000000.00000longerK562EFTUD2
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.099000.000000.00071longerK562RBM22
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.278000.000000.00000longerK562AKAP8L
A3SSDDX39AENSG00000123136.10chr19-1452336214523523145233621452349014523824145240360.106000.000000.00003longerK562AKAP8L
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.092000.000090.06194longerK562NPM1
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.107000.000000.00494longerK562NSUN2
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.153000.000000.00003longerK562SF3B4
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.120000.000020.02156longerK562TRA2A
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.110000.000000.00094longerK562PCBP1
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.321000.000000.00002longerHepG2TIAL1
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.149000.000090.01188longerHepG2RBM22
A3SSDDX39AENSG00000123136.10chr19-1452342114523618145234211452349014523824145240360.090000.000000.00000longerK562AQR
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.404000.000000.00000longerK562AQR
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.439000.000000.00000longerK562PUS1
A3SSDDX39AENSG00000123136.10chr19-1452342114523618145234211452349014523824145240360.155000.000000.00000longerK562PUS1
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.174000.000000.00113longerHepG2BCCIP
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.218000.000000.00010longerK562UTP18
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.299000.000000.00000longerHepG2PRPF8
A3SSDDX39AENSG00000123136.10chr19-145205531452079314520553145206851452102714521146-0.064000.000080.07251shorterK562SAFB
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.205000.000020.02382longerHepG2RBM15
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.070000.000240.06056longerK562TARDBP
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.213000.000000.00000longerK562RBM15
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.080000.000070.05454longerK562IGF2BP2
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.155000.000110.04894longerHepG2UCHL5
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.110000.000000.01313longerK562WDR3
A3SSDDX39AENSG00000123136.10chr19-1452055314520793145205531452068514521027145211460.109000.000000.00063longerK562PRPF8
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.252000.000000.00001includedK562SF3B4
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.184000.000000.00000includedK562SF3B4
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.170000.000000.00066includedHepG2BCCIP
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.427000.000000.00000includedK562PUS1
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.466000.000000.00000includedK562PUS1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.217000.000000.00000includedK562PUS1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.130000.001730.02092includedHepG2SF3A3
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.304000.000000.00000includedHepG2SF3A3
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.080000.000860.05168includedK562EIF4G2
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.128000.000000.00065includedK562NSUN2
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.116000.000000.00291includedK562IGF2BP2
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.171000.000100.00440includedHepG2UCHL5
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.246000.000990.09492includedHepG2PRPF4
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.148000.000000.00002includedK562PCBP1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.124000.000630.07125includedK562PCBP1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.122000.000170.01787includedK562NPM1
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.093000.001510.07241includedK562NPM1
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.320000.000000.00000includedHepG2PRPF8
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.120000.000000.00171includedK562SRSF7
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.124000.000080.01819includedK562SRSF7
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.090000.000130.02798includedK562TIA1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.106000.000240.02028includedHepG2SUPV3L1
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.162000.000200.01772includedHepG2SUPV3L1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.083000.002820.07583includedK562HNRNPUL1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.059000.000910.09054includedK562UPF1
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.106000.000550.04245includedK562PHF6
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.328000.000000.00000includedK562AGGF1
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.273000.000000.00000includedK562AGGF1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.123000.000000.00000includedK562AGGF1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.053000.000050.00112includedK562PRPF8
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.135000.000000.00001includedK562PRPF8
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.128000.000120.00235includedK562PRPF8
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.214000.000340.06935includedHepG2RBM15
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.196000.008190.08060includedHepG2PCBP1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.063000.000520.04614includedK562MTPAP
RIDDX39AENSG00000123136.10chr19-145205531452114614520553145206851452102714521146-0.080000.000290.03254excludedK562AARS
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.129000.000000.00002includedK562RBM22
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.303000.000000.00000includedK562AKAP8L
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.324000.000000.00000includedK562AKAP8L
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.145000.000000.00000includedK562AKAP8L
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.160000.000000.00003includedK562WDR3
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.063000.001130.06981includedK562WDR3
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.128000.000930.01088includedHepG2U2AF1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.263000.000000.00000includedK562RBM15
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.260000.000000.00000includedK562RBM15
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.142000.000000.00000includedK562RBM15
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.123000.000010.00538includedK562DDX24
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.116000.006270.06812includedK562U2AF2
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.327000.000000.00013includedHepG2TIAL1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.211000.002060.03543includedHepG2TIAL1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.068000.000420.04703includedK562ZC3H8
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.058000.000110.01716includedK562SERBP1
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.061000.000620.00856includedHepG2RBM22
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.215000.000000.00002includedHepG2RBM22
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.230000.000000.00002includedK562UTP18
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.256000.000000.00000includedK562UTP18
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.118000.000010.00024includedK562UTP18
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.053000.000070.00130includedK562EFTUD2
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.186000.000000.00000includedK562EFTUD2
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.124000.000640.00868includedK562EFTUD2
RIDDX39AENSG00000123136.10chr19-145233621452403614523362145234901452382414524036-0.084000.000020.00643excludedK562SAFB
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.192000.000050.01070includedHepG2SRSF7
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.080000.000050.02014includedK562ABCF1
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.385000.000000.00000includedK562AQR
RIDDX39AENSG00000123136.10chr19-1452336214524036145233621452349014523824145240360.227000.000000.00000includedK562AQR
RIDDX39AENSG00000123136.10chr19-1451966214519906145196621451976414519848145199060.062000.000000.00000includedK562AQR
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.453000.000000.00000includedK562AQR
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.147000.000110.05117includedK562TRA2A
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.106000.000010.00083includedK562TARDBP
RIDDX39AENSG00000123136.10chr19-1452055314521146145205531452068514521027145211460.117000.001150.04172includedHepG2XRN2
RIDDX39AENSG00000123136.10chr19-1452011414520457145201141452025914520347145204570.122000.000820.03412includedHepG2XRN2
RIDDX39AENSG00000123136.10chr19-145233621452403614523362145234901452382414524036-0.082000.000000.00000excludedK562FXR1
RIDDX39AENSG00000123136.10chr19-145205531452114614520553145206851452102714521146-0.071000.000070.00216excludedK562FXR1
MXEDDX39AENSG00000123136.10chr19-1452034714520457145205531452068514520114145202591452102714521146-0.110000.002400.089392includedK562TIA1
MXEDDX39AENSG00000123136.10chr19-1452034714520457145204571452068514520114145202591452102714521146-0.152000.000070.002782includedK562PRPF8
MXEDDX39AENSG00000123136.10chr19-1452034714520457145205531452068514520114145202591452102714521146-0.147000.000090.003712includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DDX39A is not avaliable on ENCORE database.