GANAB

General Information

Gene Name       : GANAB
Gene ID             : ENSG00000089597.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GANAB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GANABENSG00000089597.1784.4495.3889.91ENCSR000AEF
HepG2GANABENSG00000089597.17164.48159.47161.97ENCSR985KAT
K562GANABENSG00000089597.17198.39191.31194.85ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GANAB is not avaliable on ENCORE database.



Proteins bound to RNA
  • GANAB RNA is bound by 45 proteins.  







eCLIP assay for GANAB is not avaliable on ENCORE database.





45 proteins are bound to GANAB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116239772862397748-3'-UTR,CDS,intron-Distal4.0782320.28773HepG2SND1
chr116239455662394592-3'-UTR,CDS,intron-Distal,intron-Proximal3.7173312.03423K562DDX24
chr116239278462392806-3'-UTR,intron-Distal3.4404115.71582HepG2PCBP2
chr116239260162392646-3'-UTR,intron-Distal4.0710746.66384K562FAM120A
chr116240645562406468-3'-UTR,5'-UTR,CDS,intron-Distal5.0612929.62853K562SND1
chr116239728862397339-3'-UTR,CDS,intron-Distal3.6876811.63074K562LIN28B
chr116239404862394090-3'-UTR,CDS,intron-Distal4.2635413.22713K562LIN28B
chr116239785862397870-3'-UTR,CDS,intron-Distal3.909777.39805K562DDX24
chr116239738562397429-3'-UTR,CDS,intron-Distal5.2696859.72872K562SND1
chr116239667762396710-3'-UTR,CDS,intron-Distal5.3732834.57502K562SND1
chr116239272862392816-3'-UTR,intron-Distal3.62829400.00000K562FAM120A
chr116239284362392893-3'-UTR,intron-Distal3.792278.30615HepG2PCBP1
chr116240014962400188-3'-UTR,CDS,intron-Distal4.9234742.18849K562SND1
chr116239246762392517-3'-UTR,intron-Distal,intron-Proximal5.1500344.34648K562UPF1
chr116240229262402295-3'-UTR,CDS,intron-Distal,intron-Proximal4.8203821.67395HepG2SND1
chr116239317362393189-3'-UTR,intron-Distal,intron-Proximal3.2534721.61432K562YBX3
chr116239280662392814-3'-UTR,intron-Distal3.263814.38712HepG2FAM120A
chr116239852562398559-3'-UTR,CDS,intron-Distal5.7185226.72452HepG2SND1
chr116239322962393274-3'-UTR,intron-Distal,intron-Proximal3.8561830.07699K562FAM120A
chr116239797462397977-3'-UTR,CDS,intron-Distal,intron-Proximal4.4097719.20390HepG2SND1
chr116239641962396473-3'-UTR,CDS,intron-Distal4.1873719.14441K562DDX24
chr116240018062400220-3'-UTR,CDS,intron-Distal,intron-Proximal3.391965.85200K562BUD13
chr116239293262392984-3'-UTR,intron-Distal4.5129216.75806HepG2UPF1
chr116239273462392762-3'-UTR,intron-Distal3.6587733.35270K562PABPC4
chr116239807262398074-3'-UTR,CDS,intron-Distal,intron-Proximal5.4881834.32901K562SND1
chr116239318662393229-3'-UTR,intron-Distal,intron-Proximal4.4904839.96501K562FAM120A
chr116239318062393255-3'-UTR,intron-Distal,intron-Proximal3.3921233.70828HepG2LARP4
chr116240091762400982-3'-UTR,CDS,intron-Distal3.3814923.84176HepG2RPS3
chr116239794962397974-3'-UTR,CDS,intron-Distal,intron-Proximal4.5451229.84194HepG2SND1
chr116239274062392857-3'-UTR,intron-Distal3.0479314.42814K562HNRNPK
chr116239294562392992-3'-UTR,intron-Distal3.658295.89225K562PCBP1
chr116239259962392619-3'-UTR,intron-Distal3.332028.20042K562YBX3
chr116239281662392831-3'-UTR,intron-Distal4.2934418.41419HepG2PCBP2
chr116239283962392876-3'-UTR,intron-Distal5.0269615.05372HepG2AKAP1
chr116239807262398092-3'-UTR,CDS,intron-Distal,intron-Proximal3.9249624.34246HepG2SND1
chr116239666562396680-3'-UTR,CDS,intron-Distal,intron-Proximal4.151467.97611K562DDX24
chr116239294562392967-3'-UTR,intron-Distal3.000216.67638K562YBX3
chr116239784962397886-3'-UTR,CDS,intron-Distal,intron-Proximal5.5313138.43955K562LIN28B
chr116239325062393283-3'-UTR,intron-Distal,intron-Proximal3.0143210.79828K562DDX55
chr116239287662392912-3'-UTR,intron-Distal5.7771014.45776HepG2AKAP1
chr116239302662393068-3'-UTR,intron-Distal3.768369.58386K562IGF2BP2
chr116239274962392833-3'-UTR,intron-Distal4.8768335.81670HepG2UPF1
chr116240243762402470-3'-UTR,CDS,intron-Distal3.5675913.43477HepG2RPS3
chr116239476062394773-3'-UTR,CDS,intron-Distal,intron-Proximal4.2724622.01144K562SND1
chr116239259762392648-3'-UTR,intron-Distal3.688149.12144K562IGF2BP2
chr116240013762400149-3'-UTR,CDS,intron-Distal5.0842946.96465K562SND1
chr116240645562406484-3'-UTR,5'-UTR,CDS,intron-Distal4.0596610.14528HepG2PPIG
chr116239233162392353-3'-UTR,intron-Distal4.3779622.94550HepG2LARP4
chr116239267162392715-3'-UTR,intron-Distal5.1801222.11592HepG2UPF1
chr116239768962397719-3'-UTR,CDS,intron-Distal4.2353138.71146K562SND1
chr116239829862398308-3'-UTR,CDS,intron-Distal4.7657242.18849K562SND1
chr116240222262402292-3'-UTR,intron-Distal,intron-Proximal3.1331811.11252K562AQR
chr116239299962393077-3'-UTR,intron-Distal4.0725126.31730HepG2LARP4
chr116240019262400217-3'-UTR,CDS,intron-Distal5.9599834.12109K562SND1
chr116239791862397977-3'-UTR,CDS,intron-Distal,intron-Proximal5.5317054.32716K562SND1
chr116239261562392639-3'-UTR,intron-Distal3.8767818.69721HepG2DDX55
chr116240004062400056-3'-UTR,CDS,intron-Distal,intron-Proximal4.6269137.53867K562SND1
chr116239810462398146-3'-UTR,CDS,intron-Distal4.8030154.84817K562SND1
chr116239863862398655-3'-UTR,CDS,intron-Distal5.2927223.80621HepG2SND1
chr116240050262400555-3'-UTR,CDS,intron-Distal,intron-Proximal3.5538820.95335HepG2RPS3
chr116240003662400040-3'-UTR,CDS,intron-Distal,intron-Proximal4.0811622.91084K562SND1
chr116239479062394836-3'-UTR,CDS,intron-Distal,intron-Proximal3.5569524.30226HepG2U2AF2
chr116240014662400218-3'-UTR,CDS,intron-Distal,intron-Proximal4.2773025.15800K562DDX24
chr116239237462392431-3'-UTR,intron-Distal4.9889014.53576K562GTF2F1
chr116239244262392485-3'-UTR,intron-Distal,intron-Proximal5.0559412.10058K562DDX6
chr116239253462392587-3'-UTR,intron-Distal3.453687.99852HepG2YBX3
chr116239251862392585-3'-UTR,intron-Distal,intron-Proximal4.8907538.43037K562YBX3
chr116239773362397748-3'-UTR,CDS,intron-Distal3.037104.57537K562LIN28B
chr116239792462397952-3'-UTR,CDS,intron-Distal3.117446.47139HepG2PPIG
chr116239742862397469-3'-UTR,CDS,intron-Distal,intron-Proximal3.905544.41255K562SMNDC1
chr116240047662400499-3'-UTR,CDS,intron-Distal,intron-Proximal5.6855942.69767K562SND1
chr116239292462392970-3'-UTR,intron-Distal4.5575313.17012HepG2AKAP1
chr116239817462398198-3'-UTR,CDS,intron-Distal3.9852410.93629HepG2RPS3
chr116239404362394054-3'-UTR,CDS,intron-Distal4.6569228.30987K562SND1
chr116239318562393217-3'-UTR,intron-Distal,intron-Proximal3.223503.84817HepG2FAM120A
chr116239792162397939-3'-UTR,CDS,intron-Distal4.5749620.48991HepG2SND1
chr116239820762398258-3'-UTR,CDS,intron-Distal5.0137370.36244K562SND1
chr116239243962392498-3'-UTR,intron-Distal,intron-Proximal6.7020924.14401HepG2UPF1
chr116240229262402296-3'-UTR,CDS,intron-Distal,intron-Proximal4.3210531.69882K562SND1
chr116239740562397429-3'-UTR,CDS,intron-Distal4.3355417.20135HepG2SND1
chr116239238862392480-3'-UTR,intron-Distal,intron-Proximal3.5009910.96309HepG2PRPF4
chr116239283262392891-3'-UTR,intron-Distal4.4023414.67172K562PCBP1
chr116239859462398625-3'-UTR,CDS,intron-Distal5.9080755.43352K562SND1
chr116239766862397675-3'-UTR,CDS,intron-Distal,intron-Proximal4.5937431.87792K562SND1
chr116239380662393811-3'-UTR,CDS,intron-Distal,intron-Proximal4.3626932.75778K562SND1
chr116239318262393232-3'-UTR,intron-Distal,intron-Proximal3.617267.08232HepG2SUB1
chr116239773662397743-3'-UTR,CDS,intron-Distal3.241557.27132HepG2RPS3
chr116239807362398153-3'-UTR,CDS,intron-Distal,intron-Proximal4.1045437.35244HepG2RPS3
chr116239260762392671-3'-UTR,intron-Distal5.6992835.57758HepG2UPF1
chr116239298462393078-3'-UTR,intron-Distal5.0616322.73064HepG2UPF1
chr116239789962397931-3'-UTR,CDS,intron-Distal3.227246.26705HepG2LIN28B
chr116240047762400494-3'-UTR,CDS,intron-Distal,intron-Proximal4.3675517.31040K562DDX24
chr116240232862402352-3'-UTR,CDS,intron-Distal,intron-Proximal5.3345355.28519K562SND1
chr116239266362392707-3'-UTR,intron-Distal3.001124.19449K562PABPC4
chr116239265962392704-3'-UTR,intron-Distal4.2409247.99148K562FAM120A
chr116239860062398648-3'-UTR,CDS,intron-Distal4.3506421.42791HepG2RPS3
chr116239480662394824-3'-UTR,CDS,intron-Distal4.9407610.92204K562RPS3
chr116239294062392968-3'-UTR,intron-Distal3.552986.45752K562DDX6
chr116240657462406579-3'-UTR,5'-UTR,CDS,intron-Distal3.023905.47500HepG2PPIG
chr116240649762406540-3'-UTR,5'-UTR,CDS,intron-Distal3.395936.51044K562LIN28B
chr116239277162392784-3'-UTR,intron-Distal3.087949.25675HepG2PCBP2
chr116240093062400975-3'-UTR,CDS,intron-Distal3.6470313.15429K562DDX24
chr116239740762397488-3'-UTR,CDS,intron-Distal,intron-Proximal3.886607.67357HepG2EFTUD2
chr116239273262392769-3'-UTR,intron-Distal3.2251620.02377HepG2FAM120A
chr116239634962396390-3'-UTR,CDS,intron-Distal3.2927016.62089HepG2SND1
chr116239740362397428-3'-UTR,CDS,intron-Distal3.104529.39235K562DDX24
chr116239624462396255-3'-UTR,CDS,intron-Distal4.8196545.01382K562SND1
chr116239311462393162-3'-UTR,intron-Distal,intron-Proximal3.8635515.78320HepG2LARP4
chr116239325562393294-3'-UTR,CDS,intron-Distal,intron-Proximal3.2607812.28302HepG2LARP4
chr116239314562393152-3'-UTR,intron-Distal,intron-Proximal3.5556922.32815K562YBX3
chr116239710462397154-3'-UTR,CDS,intron-Distal3.621448.94439K562LIN28B
chr116239293462392957-3'-UTR,intron-Distal4.6025319.34510HepG2PCBP2
chr116239478662394805-3'-UTR,CDS,intron-Distal4.0185412.79353K562U2AF2
chr116239232462392371-3'-UTR,intron-Distal3.9968719.72457K562LSM11
chr116239710762397148-3'-UTR,CDS,intron-Distal3.236476.88281HepG2LIN28B
chr116239233162392375-3'-UTR,intron-Distal3.4775416.25127HepG2DDX55
chr116240047662400490-3'-UTR,CDS,intron-Distal,intron-Proximal3.714969.59666HepG2RPS3
chr116239260462392618-3'-UTR,intron-Distal3.282243.35294K562PABPC4
chr116239278162392808-3'-UTR,intron-Distal4.4250431.03290HepG2AKAP1
chr116239231962392374-3'-UTR,intron-Distal3.6398010.31776HepG2TIAL1
chr116239624162396253-3'-UTR,CDS,intron-Distal3.9304923.64352HepG2SND1
chr116240213762402259-3'-UTR,intron-Distal,intron-Proximal3.9512213.76838HepG2PRPF4
chr116239295762392970-3'-UTR,intron-Distal4.3976817.36881HepG2PCBP2
chr116239232562392374-3'-UTR,intron-Distal3.471519.61642K562GTF2F1
chr116240096862400986-3'-UTR,CDS,intron-Distal4.6616334.68820K562SND1
chr116239629362396336-3'-UTR,CDS,intron-Distal3.101993.98140K562LIN28B
chr116240052062400552-3'-UTR,CDS,intron-Distal,intron-Proximal4.243595.93686K562XRCC6
chr116239823862398306-3'-UTR,CDS,intron-Distal3.4434823.84176HepG2RPS3
chr116240055262400576-3'-UTR,CDS,intron-Distal,intron-Proximal3.585843.46269K562XRCC6
chr116239280862392839-3'-UTR,intron-Distal4.6581325.17681HepG2AKAP1
chr116239265762392710-3'-UTR,intron-Distal4.4109674.71584K562UPF1
chr116239293262392973-3'-UTR,intron-Distal3.2865217.62573K562PABPC4
chr116239274762392783-3'-UTR,intron-Distal3.5249623.25665HepG2LARP4
chr116240008662400148-3'-UTR,CDS,intron-Distal4.9902320.38326HepG2SND1
chr116239275762392832-3'-UTR,intron-Distal3.5018717.38608K562PCBP1
chr116239667862396700-3'-UTR,CDS,intron-Distal4.318208.22913K562RPS3
chr116239245962392499-3'-UTR,intron-Distal,intron-Proximal4.5777226.71665K562FAM120A
chr116239789562397926-3'-UTR,CDS,intron-Distal3.5080819.85777K562YBX3
chr116239851062398537-3'-UTR,CDS,intron-Distal4.6601949.19790K562SND1
chr116239275462392781-3'-UTR,intron-Distal4.2427122.56621HepG2AKAP1
chr116239299062393026-3'-UTR,intron-Distal3.5234610.15074K562IGF2BP2
chr116239736062397381-3'-UTR,CDS,intron-Distal5.2452332.85304K562SND1
chr116239232262392375-3'-UTR,intron-Distal4.0973039.27316K562DDX6
chr116240047662400499-3'-UTR,CDS,intron-Distal,intron-Proximal3.647783.37921HepG2UCHL5
chr116240183762401880-3'-UTR,CDS,intron-Distal,intron-Proximal3.0814810.16725HepG2PCBP2
chr116239278362392834-3'-UTR,intron-Distal3.7696844.90710K562DDX55
chr116240246862402472-3'-UTR,CDS,intron-Distal4.2413624.88283K562SND1
chr116239318862393229-3'-UTR,intron-Distal,intron-Proximal4.4794311.21783K562LIN28B
chr116240229562402325-3'-UTR,CDS,intron-Distal,intron-Proximal5.4273132.57975HepG2SND1
chr116239238262392414-3'-UTR,intron-Distal3.305225.60059K562APOBEC3C
chr116239815962398207-3'-UTR,CDS,intron-Distal4.3622750.12035K562SND1
chr116240683062406893-3'-UTR,CDS,intron-Distal,intron-Proximal5.4705617.96342K562RPS3
chr116239826462398285-3'-UTR,CDS,intron-Distal4.1097924.05837HepG2SND1
chr116239307562393120-3'-UTR,intron-Distal,intron-Proximal3.971299.96267HepG2AKAP1
chr116240067362400742-3'-UTR,CDS,intron-Distal,intron-Proximal3.5776723.47541K562DDX24
chr116239235362392373-3'-UTR,intron-Distal4.4381823.87183HepG2LARP4
chr116239292762392976-3'-UTR,intron-Distal3.4612916.78672K562DDX55
chr116240091662400928-3'-UTR,CDS,intron-Distal,intron-Proximal3.957868.35235K562RPS3
chr116239338562393448-3'-UTR,CDS,intron-Distal,intron-Proximal4.2013910.46991K562EFTUD2
chr116240051162400570-3'-UTR,CDS,intron-Distal,intron-Proximal3.6018223.23188K562DDX24
chr116239267362392717-3'-UTR,intron-Distal5.1610183.91130HepG2PCBP2
chr116239302262393078-3'-UTR,intron-Distal4.5962267.18275HepG2PCBP2
chr116239275062392858-3'-UTR,intron-Distal3.2015016.97029K562AKAP1
chr116239830562398308-3'-UTR,CDS,intron-Distal3.7272213.54924HepG2SND1
chr116240006262400086-3'-UTR,CDS,intron-Distal,intron-Proximal5.1155516.22741HepG2SND1
chr116239302662393079-3'-UTR,intron-Distal5.6802817.52177K562PCBP1
chr116239331462393348-3'-UTR,CDS,intron-Distal3.306197.92562HepG2RPS3
chr116239276962392796-3'-UTR,intron-Distal3.2524322.07884HepG2FAM120A
chr116239278762392843-3'-UTR,intron-Distal4.09739400.00000K562UPF1
chr116239239662392439-3'-UTR,intron-Distal,intron-Proximal4.6915819.02328HepG2UPF1
chr116239380562393826-3'-UTR,CDS,intron-Distal,intron-Proximal3.6910118.50373K562YBX3
chr116239273662392787-3'-UTR,intron-Distal4.24848400.00000K562UPF1
chr116239850162398510-3'-UTR,CDS,intron-Distal,intron-Proximal4.7466742.43335K562SND1
chr116239478962394836-3'-UTR,CDS,intron-Distal,intron-Proximal4.422564.92499HepG2AQR
chr116239233162392368-3'-UTR,intron-Distal4.199789.90371K562PABPC4
chr116239260862392658-3'-UTR,intron-Distal3.5464112.61737HepG2AKAP1
chr116239762662397675-3'-UTR,CDS,intron-Distal,intron-Proximal4.985997.09786HepG2AQR
chr116239480962394825-3'-UTR,CDS,intron-Distal3.8037319.46550HepG2SND1
chr116239232162392372-3'-UTR,intron-Distal4.5230274.42778K562FAM120A
chr116239792662397936-3'-UTR,CDS,intron-Distal3.3503116.92871K562YBX3
chr116239263662392698-3'-UTR,intron-Distal3.832676.22424HepG2ILF3
chr116239279362392815-3'-UTR,intron-Distal4.5339022.16498K562IGF2BP2
chr116239458862394596-3'-UTR,CDS,intron-Distal,intron-Proximal4.3226422.25468K562SND1
chr116239825862398287-3'-UTR,CDS,intron-Distal5.0712353.58348K562SND1
chr116239740062397429-3'-UTR,CDS,intron-Distal4.6119410.44341HepG2PPIG
chr116239261862392640-3'-UTR,intron-Distal3.7701532.69396K562PABPC4
chr116239456862394588-3'-UTR,CDS,intron-Distal,intron-Proximal4.5783730.21038K562SND1
chr116239264062392663-3'-UTR,intron-Distal3.8497735.50904K562PABPC4
chr116239265762392673-3'-UTR,intron-Distal4.5392539.98251HepG2PCBP2
chr116239293862392974-3'-UTR,intron-Distal3.3797612.04831HepG2LARP4
chr116239237262392419-3'-UTR,intron-Distal3.1236830.03406K562FAM120A
chr116239853762398557-3'-UTR,CDS,intron-Distal4.4684826.88502K562SND1
chr116239276262392809-3'-UTR,intron-Distal3.6287049.43582K562PABPC4
chr116239232662392376-3'-UTR,intron-Distal3.9890416.76708HepG2AKAP1
chr116239481062394824-3'-UTR,CDS,intron-Distal3.899077.61854HepG2RPS3
chr116239323762393296-3'-UTR,CDS,intron-Distal,intron-Proximal4.2716917.30457HepG2LIN28B
chr116239635862396404-3'-UTR,CDS,intron-Distal5.4227046.98184K562SND1
chr116239261462392657-3'-UTR,intron-Distal3.6510347.95916K562UPF1
chr116240649962406521-3'-UTR,5'-UTR,CDS,intron-Distal4.3024020.64880HepG2SND1
chr116239312862393149-3'-UTR,intron-Distal,intron-Proximal3.2573916.17959K562FAM120A
chr116239790162397946-3'-UTR,CDS,intron-Distal3.9228814.06645K562LIN28B
chr116239391462393917-3'-UTR,CDS,intron-Distal4.4456724.38579K562SND1
chr116239361862393637-3'-UTR,CDS,intron-Distal4.1104832.89970K562SND1
chr116239809362398144-3'-UTR,CDS,intron-Distal4.6068639.81051HepG2SND1
chr116240650062406529-3'-UTR,5'-UTR,CDS,intron-Distal3.763696.15985HepG2LIN28B
chr116240229062402334-3'-UTR,CDS,intron-Distal,intron-Proximal3.9992815.78065K562DDX24
chr116239785062397871-3'-UTR,CDS,intron-Distal,intron-Proximal4.4484927.12127HepG2SND1
chr116239232862392388-3'-UTR,intron-Distal3.7283112.50832HepG2PRPF4
chr116240229662402326-3'-UTR,CDS,intron-Distal,intron-Proximal5.3040967.31803K562SND1
chr116239264862392659-3'-UTR,intron-Distal5.153057.77894K562IGF2BP2
chr116239452962394541-3'-UTR,CDS,intron-Distal3.225376.61676HepG2PPIG
chr116239284662392872-3'-UTR,intron-Distal4.0596929.38828HepG2PCBP2
chr116240049862400565-3'-UTR,CDS,intron-Distal,intron-Proximal4.5738529.87354HepG2SND1
chr116239792162397961-3'-UTR,CDS,intron-Distal4.3052915.98068HepG2RPS3
chr116239262062392698-3'-UTR,intron-Distal4.329283.62025K562MATR3
chr116239279662392806-3'-UTR,intron-Distal3.3050914.51556HepG2FAM120A
chr116239481062394825-3'-UTR,CDS,intron-Distal4.5824141.48720K562SND1
chr116239857462398638-3'-UTR,CDS,intron-Distal5.6800751.21182HepG2SND1
chr116239249962392565-3'-UTR,intron-Distal,intron-Proximal4.4944042.50924K562FAM120A
chr116239260162392636-3'-UTR,intron-Distal4.2314117.65218HepG2PCBP2
chr116239642362396443-3'-UTR,CDS,intron-Distal5.2754534.57502K562SND1
chr116239237962392430-3'-UTR,intron-Distal4.4640820.44395K562DDX6
chr116239266562392694-3'-UTR,intron-Distal4.158648.29265HepG2FAM120A
chr116239274662392771-3'-UTR,intron-Distal3.1289910.69830HepG2PCBP2
chr116240233162402342-3'-UTR,CDS,intron-Distal,intron-Proximal4.8746915.34287HepG2SND1
chr116239624062396244-3'-UTR,CDS,intron-Distal,intron-Proximal4.8159340.71958K562SND1
chr116239785462397897-3'-UTR,CDS,intron-Distal4.9216830.33667HepG2LIN28B
chr116240648062406527-3'-UTR,5'-UTR,CDS,intron-Distal5.5563942.32989K562SND1
chr116239317062393241-3'-UTR,intron-Distal,intron-Proximal5.9572224.52634HepG2UPF1
chr116240093462400974-3'-UTR,CDS,intron-Distal3.9617731.17431HepG2SND1
chr116239292862392972-3'-UTR,intron-Distal3.9060238.52536K562FAM120A
chr116239741162397517-3'-UTR,CDS,intron-Distal,intron-Proximal3.3204517.70091K562SF3B4
chr116240003662400056-3'-UTR,CDS,intron-Distal,intron-Proximal5.4365928.31050HepG2SND1
chr116239323762393280-3'-UTR,intron-Distal,intron-Proximal4.5972022.47058K562RPS3
chr116239809062398101-3'-UTR,CDS,intron-Distal5.5382439.60778K562SND1
chr116239390262393909-3'-UTR,CDS,intron-Distal4.6131121.79032K562SND1
chr116239644362396471-3'-UTR,CDS,intron-Distal4.3679431.50062K562SND1
chr116239318962393228-3'-UTR,intron-Distal,intron-Proximal3.9176625.73658K562UPF1
chr116240047662400498-3'-UTR,CDS,intron-Distal,intron-Proximal4.1544918.96122HepG2SND1
chr116239295162392972-3'-UTR,intron-Distal3.132468.15534K562IGF2BP2
chr116239301762393075-3'-UTR,intron-Distal4.9773118.30956HepG2AKAP1
chr116239322862393271-3'-UTR,intron-Distal,intron-Proximal3.621195.70529HepG2FAM120A
chr116239820962398264-3'-UTR,CDS,intron-Distal5.6452039.52210HepG2SND1
chr116240050562400559-3'-UTR,CDS,intron-Distal,intron-Proximal3.3212116.93949HepG2PPIG
chr116239453962394575-3'-UTR,CDS,intron-Distal3.9078413.35431HepG2RPS3
chr116239297662392996-3'-UTR,intron-Distal3.196497.12644K562DDX55
chr116239232162392371-3'-UTR,intron-Distal4.242598.59956HepG2TIA1
chr116239287262392886-3'-UTR,intron-Distal3.5169418.14644HepG2PCBP2
chr116240066362400708-3'-UTR,CDS,intron-Distal,intron-Proximal3.3759313.56556HepG2PPIG
chr116239645762396468-3'-UTR,CDS,intron-Distal3.975683.91585HepG2PRPF4
chr116239264662392660-3'-UTR,intron-Distal3.028225.99136HepG2FAM120A
chr116240055962400571-3'-UTR,CDS,intron-Distal,intron-Proximal3.105038.05447HepG2PPIG
chr116239239262392414-3'-UTR,intron-Distal7.3040752.72639K562UPF1
chr116239307862393112-3'-UTR,intron-Distal,intron-Proximal4.1332127.75801HepG2PCBP2
chr116239788662397901-3'-UTR,CDS,intron-Distal4.9508332.09757K562LIN28B
chr116240006162400088-3'-UTR,CDS,intron-Distal,intron-Proximal6.2245558.77489K562SND1
chr116239828562398305-3'-UTR,CDS,intron-Distal3.6459716.64995HepG2SND1
chr116240067262400715-3'-UTR,CDS,intron-Distal,intron-Proximal4.6377825.70538HepG2SND1
chr116240091762400928-3'-UTR,CDS,intron-Distal4.5597917.08371HepG2SND1
chr116240052262400570-3'-UTR,CDS,intron-Distal,intron-Proximal5.2575269.65754K562SND1
chr116239232362392373-3'-UTR,intron-Distal7.58009400.00000K562UPF1
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chr116239231862392366-3'-UTR,intron-Distal5.3905644.84850K562TIA1
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chr116239251762392569-3'-UTR,intron-Distal,intron-Proximal4.6377847.36167K562UPF1
chr116239283362392887-3'-UTR,intron-Distal5.4313421.27216HepG2UPF1
chr116239315262393173-3'-UTR,intron-Distal,intron-Proximal3.8123424.97453K562YBX3
chr116239258562392599-3'-UTR,intron-Distal4.8815810.75300K562YBX3
chr116239828762398298-3'-UTR,CDS,intron-Distal4.8997345.12755K562SND1
chr116239236362392425-3'-UTR,intron-Distal5.3428121.34459HepG2FAM120A
chr116239404862394088-3'-UTR,CDS,intron-Distal3.385707.75945HepG2LIN28B
chr116239318462393238-3'-UTR,intron-Distal,intron-Proximal3.9180936.40701K562PABPC4
chr116239245462392514-3'-UTR,intron-Distal,intron-Proximal5.279319.89562K562PUM2
chr116239324162393280-3'-UTR,intron-Distal,intron-Proximal4.4252811.21254HepG2UPF1
chr116239292662392975-3'-UTR,intron-Distal4.6378059.04161K562UPF1
chr116240683562406901-3'-UTR,CDS,intron-Distal4.8008720.46052HepG2RPS3
chr116239355062393579-3'-UTR,CDS,intron-Distal3.118559.73686K562FAM120A
chr116239233262392374-3'-UTR,intron-Distal3.628049.42578HepG2DDX6
chr116239852562398549-3'-UTR,CDS,intron-Distal3.4912810.25187HepG2RPS3
chr116239274462392770-3'-UTR,intron-Distal3.7168930.22923K562DDX55
chr116240244162402471-3'-UTR,CDS,intron-Distal3.835299.66778HepG2PPIG
chr116239237562392420-3'-UTR,intron-Distal4.445189.92850K562LARP4
chr116239265262392718-3'-UTR,intron-Distal4.4507717.81429K562PCBP1
chr116239311762393136-3'-UTR,intron-Distal,intron-Proximal3.6587117.08567K562YBX3
chr116239625362396270-3'-UTR,CDS,intron-Distal3.9894819.01509HepG2SND1
chr116239245662392495-3'-UTR,intron-Distal,intron-Proximal4.6779111.96459HepG2FAM120A
chr116240019262400217-3'-UTR,CDS,intron-Distal4.8467316.70489HepG2SND1
chr116240095762401055-3'-UTR,CDS,intron-Distal,intron-Proximal3.512979.49781HepG2AQR
chr116239302262393090-3'-UTR,intron-Distal3.2472334.99366K562UPF1
chr116239859762398626-3'-UTR,CDS,intron-Distal3.986398.67140K562RPS3
chr116239265862392702-3'-UTR,intron-Distal3.1879413.22546K562DDX6
chr116239302262393055-3'-UTR,intron-Distal3.6929923.92937K562FAM120A
chr116239452062394527-3'-UTR,CDS,intron-Distal3.786373.53569K562LIN28B
chr116239809162398185-3'-UTR,CDS,intron-Distal4.0196827.53426K562RPS3
chr116239237362392392-3'-UTR,intron-Distal8.3650664.28965K562UPF1
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chr116239232762392392-3'-UTR,intron-Distal3.3331614.91475HepG2LSM11
chr116239630562396326-3'-UTR,CDS,intron-Distal5.7306136.98419K562SND1
chr116239261362392658-3'-UTR,intron-Distal4.0189715.70119K562DDX6
chr116239862562398639-3'-UTR,CDS,intron-Distal4.6821136.31597K562SND1
chr116239326062393278-3'-UTR,intron-Distal,intron-Proximal4.0585414.93126K562LIN28B
chr116239280662392816-3'-UTR,intron-Distal4.4083214.66322HepG2PCBP2
chr116239859662398636-3'-UTR,CDS,intron-Distal3.343035.64596K562LIN28B
chr116239265862392707-3'-UTR,intron-Distal4.5036919.43201HepG2AKAP1
chr116240019262400216-3'-UTR,CDS,intron-Distal3.529923.10693HepG2UCHL5
chr116239771962397742-3'-UTR,CDS,intron-Distal4.7877842.32336K562SND1
chr116240091562400995-3'-UTR,CDS,intron-Distal,intron-Proximal3.0763920.22572HepG2PPIG
chr116239785262397875-3'-UTR,CDS,intron-Distal5.0620034.82005K562SND1
chr116240097462400986-3'-UTR,CDS,intron-Distal3.8026520.75657HepG2SND1
chr116240008862400137-3'-UTR,CDS,intron-Distal5.7191674.22039K562SND1
chr116239283162392846-3'-UTR,intron-Distal4.2882815.24247HepG2PCBP2
chr116240071562400742-3'-UTR,CDS,intron-Distal,intron-Proximal4.8419921.32737HepG2SND1
chr116239810162398104-3'-UTR,CDS,intron-Distal5.0531722.42575K562SND1
chr116239273762392793-3'-UTR,intron-Distal3.9199930.47432K562IGF2BP2
chr116240245662402467-3'-UTR,CDS,intron-Distal4.3639731.16956K562SND1
chr116239246962392502-3'-UTR,intron-Distal,intron-Proximal4.2747415.01445K562YBX3
chr116239628762396305-3'-UTR,CDS,intron-Distal5.2402032.60704K562SND1
chr116240049962400522-3'-UTR,CDS,intron-Distal,intron-Proximal5.7343953.76678K562SND1
chr116239785062397852-3'-UTR,CDS,intron-Distal,intron-Proximal5.8986133.48579K562SND1
chr116239278762392835-3'-UTR,intron-Distal3.2461926.76596HepG2LARP4
chr116239859562398654-3'-UTR,CDS,intron-Distal3.0275010.14400HepG2PPIG
chr116239260262392646-3'-UTR,intron-Distal3.059327.56745HepG2FAM120A
chr116240068462400708-3'-UTR,CDS,intron-Distal4.5372929.67268K562SND1
chr116239324562393280-3'-UTR,intron-Distal,intron-Proximal4.0308213.11837HepG2RPS3
chr116239318462393225-3'-UTR,intron-Distal,intron-Proximal4.6695013.71327HepG2AKAP1
chr116239247062392519-3'-UTR,intron-Distal,intron-Proximal4.731679.05620HepG2SUB1
chr116239770462397810-3'-UTR,CDS,intron-Distal,intron-Proximal3.5621715.51485K562EFTUD2
chr116239861062398700-3'-UTR,CDS,intron-Distal,intron-Proximal4.332276.92290HepG2AQR
chr116239232862392396-3'-UTR,intron-Distal4.3925023.41296HepG2UPF1
chr116239292962392945-3'-UTR,intron-Distal3.5911411.81469K562YBX3
chr116239382662393836-3'-UTR,CDS,intron-Distal,intron-Proximal3.5084318.42272K562YBX3
chr116239850162398510-3'-UTR,CDS,intron-Distal,intron-Proximal4.0110612.03172HepG2SND1
chr116240011862400151-3'-UTR,CDS,intron-Distal3.7677812.42508HepG2RPS3
chr116239772862397748-3'-UTR,CDS,intron-Distal3.390648.18233HepG2LIN28B
chr116240050462400554-3'-UTR,CDS,intron-Distal,intron-Proximal5.2568919.38948K562RPS3
chr116239863962398655-3'-UTR,CDS,intron-Distal4.2356530.61014K562SND1
chr116239234062392348-3'-UTR,intron-Distal5.561455.10887HepG2FAM120A
chr116239232562392368-3'-UTR,intron-Distal5.4966810.49746K562APOBEC3C
chr116239814662398159-3'-UTR,CDS,intron-Distal4.1775328.42128K562SND1
chr116239307862393170-3'-UTR,intron-Distal,intron-Proximal4.9102318.73935HepG2UPF1
chr116239261862392661-3'-UTR,intron-Distal4.3350214.31980K562LIN28B
chr116239625562396279-3'-UTR,CDS,intron-Distal5.1480848.19140K562SND1
chr116239774262397748-3'-UTR,CDS,intron-Distal5.4416330.35497K562SND1
chr116239784962397854-3'-UTR,CDS,intron-Distal,intron-Proximal4.4828510.09100HepG2LIN28B
chr116239275162392811-3'-UTR,intron-Distal3.421436.99156HepG2TIAL1
chr116239318562393242-3'-UTR,intron-Distal,intron-Proximal3.0635114.04060K562DDX55
chr116240711962407180-5'-UTR,CDS,intron-Distal3.293863.34231K562RBM15
chr116240710862407127-5'-UTR,CDS,intron-Distal3.903398.91582HepG2PPIG
chr116240713162407184-5'-UTR,CDS,intron-Distal3.0909410.54963K562DDX3X
chr116240713362407176-5'-UTR,CDS,intron-Distal4.6769121.74739HepG2RPS3
chr116240710062407108-5'-UTR,CDS,intron-Distal,intron-Proximal4.022138.98325HepG2PPIG
chr116240718362407214-5'-UTR,CDS,intron-Distal,intron-Proximal3.119133.87810K562U2AF2
chr116240716262407220-5'-UTR,CDS,intron-Distal,intron-Proximal6.0929311.56697K562AQR
chr116240713662407160-5'-UTR,CDS,intron-Distal3.315965.07297K562BUD13
chr116240718062407224-5'-UTR,CDS,intron-Distal,intron-Proximal3.8155812.40879HepG2U2AF2
chr116240718462407253-5'-UTR,CDS,intron-Distal,intron-Proximal5.425219.24583HepG2AQR
chr116240691562406933-CDS,intron-Distal3.297646.58818HepG2PPIG
chr116240691762406979-CDS,intron-Distal,intron-Proximal3.345515.40420HepG2AQR
chr116241124862411289-intron-Distal4.190353.48745HepG2ILF3
chr116239990062399962-intron-Distal,intron-Proximal3.563584.79829K562EFTUD2
chr116240212762402209-intron-Distal,intron-Proximal3.310415.96077HepG2U2AF1
chr116240728062407322-intron-Distal,intron-Proximal3.9237310.82383HepG2U2AF2
chr116240619162406240-intron-Distal4.399895.10810HepG2U2AF1
chr116239984562399942-intron-Distal,intron-Proximal5.035715.33214K562PRPF8
chr116241323562413284-intron-Distal3.110263.36616K562NONO
chr116240100562401052-intron-Distal,intron-Proximal5.4081818.40538K562DDX24
chr116241191662411930-intron-Distal3.274086.21552HepG2ILF3
chr116240619462406240-intron-Distal4.203315.28637K562U2AF2
chr116239656162396655-intron-Distal,intron-Proximal4.335628.09130K562EFTUD2
chr116240620362406294-intron-Distal5.261577.41017K562PTBP1
chr116241399562414034-intron-Distal5.126766.03362HepG2AQR
chr116239346062393502-intron-Distal,intron-Proximal4.665926.40957HepG2EFTUD2
chr116239765962397668-intron-Distal,intron-Proximal5.600738.88118K562AQR
chr116241075162410809-intron-Distal3.275214.25372HepG2HNRNPC
chr116241167762411724-intron-Distal3.630447.38927HepG2ILF3
chr116240164262401750-intron-Distal,intron-Proximal3.773289.27417HepG2HNRNPK
chr116240599162406070-intron-Distal3.859095.76944HepG2U2AF2
chr116240099662401049-intron-Distal,intron-Proximal3.215025.46818K562U2AF1
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chr116241208462412094-intron-Distal4.179333.48745HepG2ILF3
chr116240737162407409-intron-Distal,intron-Proximal3.355934.20336HepG2AQR
chr116240599262406073-intron-Distal5.654866.90462K562PTBP1
chr116239743762397484-intron-Distal,intron-Proximal5.445568.88118K562AQR
chr116241184262411848-intron-Distal3.8913514.51410HepG2ILF3
chr116239831862398364-intron-Distal,intron-Proximal3.798783.05889HepG2SF3B4
chr116241177962411808-intron-Distal4.440313.71997HepG2ILF3
chr116239485662394904-intron-Distal,intron-Proximal3.798783.01266HepG2SF3B4
chr116241123462411292-intron-Distal3.4791810.56759HepG2HNRNPC
chr116239659762396666-intron-Distal,intron-Proximal5.021537.23427HepG2AQR
chr116239614662396215-intron-Distal,intron-Proximal3.694937.29837HepG2RBM22
chr116241205062412084-intron-Distal3.905345.98182HepG2ILF3
chr116239471162394757-intron-Distal,intron-Proximal3.999845.34978HepG2PRPF8
chr116239429962394310-intron-Distal,intron-Proximal4.623633.62536K562AQR
chr116240100262401091-intron-Distal,intron-Proximal3.5175410.10955K562U2AF2
chr116240191862401958-intron-Distal,intron-Proximal3.251114.95232K562PRPF8
chr116240210562402222-intron-Distal,intron-Proximal4.119726.70492K562RBFOX2
chr116239760462397631-intron-Distal,intron-Proximal4.592934.98250K562AQR
chr116240149462401548-intron-Distal,intron-Proximal4.701826.08961HepG2PTBP1
chr116239347862393535-intron-Distal,intron-Proximal5.550817.28100K562EFTUD2
chr116239430062394327-intron-Distal,intron-Proximal4.683715.93128HepG2PRPF8
chr116240721062407260-intron-Distal,intron-Proximal3.556589.58779HepG2SF3A3
chr116241136362411412-intron-Distal4.755615.37186HepG2ILF3
chr116240209762402158-intron-Distal,intron-Proximal3.338949.32736K562PRPF8
chr116240619362406249-intron-Distal5.0572911.18830HepG2U2AF2
chr116239763162397659-intron-Distal,intron-Proximal5.1211213.23057K562AQR
chr116240194062401953-intron-Distal,intron-Proximal3.022185.98642K562DDX24
chr116240218362402219-intron-Distal,intron-Proximal3.483864.12529K562GTF2F1
chr116239378462393802-intron-Distal,intron-Proximal5.364996.01989HepG2PRPF8
chr116240722062407266-intron-Distal,intron-Proximal3.667744.59518HepG2SF3B4
chr116240598062406079-intron-Distal4.595129.54872HepG2PTBP1
chr116239620862396236-intron-Distal,intron-Proximal4.662804.94356HepG2PRPF8
chr116240150462401552-intron-Distal3.862736.99200HepG2EFTUD2
chr116240112862401176-intron-Distal,intron-Proximal4.010165.65979HepG2PTBP1
chr116239866262398713-intron-Distal,intron-Proximal4.381634.57682HepG2SF3B4
chr116239986962399946-intron-Distal,intron-Proximal3.538269.90495HepG2EFTUD2
chr116239759962397666-intron-Distal,intron-Proximal3.371855.97015HepG2EFTUD2
chr116240939162409476-intron-Distal4.246267.82139HepG2ILF3
chr116239619662396240-intron-Distal,intron-Proximal5.342337.28294K562AQR
chr116241399362414034-intron-Distal5.5128518.55082K562AQR
chr116240131062401359-intron-Distal3.915023.58455K562U2AF2
chr116239614762396207-intron-Distal,intron-Proximal4.1218911.20406HepG2EFTUD2
chr116240216862402223-intron-Distal,intron-Proximal3.744494.57180HepG2AQR
chr116240722062407233-intron-Distal,intron-Proximal5.181375.69951K562AQR
chr116240083362400886-intron-Distal,intron-Proximal4.583525.32906HepG2AQR
chr116241182462411842-intron-Distal3.444126.71241HepG2ILF3
chr116241264462412696-intron-Distal3.719239.88526HepG2HNRNPC
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GANAB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GANAB is not available on ENCORE database.

  • 107 RBPs can affect the levels of GANAB.  








The Knockdown/knockout RNA-Seq assay for GANAB is not available on ENCORE database.





107 RBPs can affect the gene expression of GANAB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GANABENSG00000089597.126591.999109172.76970-0.4766014.6035013.43970HepG2ACO1
GANABENSG00000089597.129469.1506012583.21910-0.410203.385902.80560HepG2AKAP1
GANABENSG00000089597.126794.855009215.05700-0.4396011.9174010.47310HepG2AKAP8L
GANABENSG00000089597.129749.1593012577.42380-0.367509.145908.01820HepG2AUH
GANABENSG00000089597.126490.178409169.80340-0.4986020.2890018.85240HepG2CKAP4
GANABENSG00000089597.124668.404207525.84600-0.688905.273304.21450HepG2CNOT7
GANABENSG00000089597.125083.670603895.458400.384002.580101.91260HepG2CPSF6
GANABENSG00000089597.125186.171907244.12610-0.482103.607901.97000HepG2CSTF2T
GANABENSG00000089597.129152.8319010939.07730-0.257203.950303.20730HepG2CELF1
GANABENSG00000089597.1213513.5285011761.232400.200304.661503.73680HepG2DAZAP1
GANABENSG00000089597.126727.050808483.05060-0.334608.814807.47820HepG2DDX19B
GANABENSG00000089597.124763.1264012053.18470-1.3394033.7727031.85220HepG2DDX3X
GANABENSG00000089597.125309.476206842.90000-0.366003.007302.20710HepG2DDX55
GANABENSG00000089597.128137.301806686.492500.283202.736301.75630HepG2DHX30
GANABENSG00000089597.125657.929506871.77450-0.280406.257805.33380HepG2DNAJC2
GANABENSG00000089597.128187.126209953.44580-0.281802.112101.58660HepG2EIF2S1
GANABENSG00000089597.124337.912105517.15230-0.346902.654601.76790HepG2EIF3D
GANABENSG00000089597.129192.0255011604.00600-0.336207.316706.07090HepG2EIF4G1
GANABENSG00000089597.1210741.5905014440.77170-0.4269012.9433011.80030HepG2ETF1
GANABENSG00000089597.125927.246508962.57140-0.5966011.491309.82010HepG2EWSR1
GANABENSG00000089597.125952.937507437.86020-0.321303.625302.34050HepG2FASTKD2
GANABENSG00000089597.126312.526409613.18680-0.606805.247604.21560HepG2FIP1L1
GANABENSG00000089597.128761.326307237.234600.275602.683401.90980HepG2FUBP3
GANABENSG00000089597.123972.906204912.25850-0.306202.676101.79480HepG2GEMIN5
GANABENSG00000089597.126427.920807884.41340-0.294702.224401.31570HepG2GNB2L1
GANABENSG00000089597.126793.536704415.335600.621505.083004.23200HepG2GPKOW
GANABENSG00000089597.125213.909606998.90220-0.424805.645604.76560HepG2HNRNPA1
GANABENSG00000089597.125282.736607785.15380-0.559409.138507.93560HepG2HNRNPC
GANABENSG00000089597.1211784.0039010713.290900.137302.649401.98980HepG2HNRNPL
GANABENSG00000089597.126755.659304213.678600.680909.657708.56220HepG2HNRNPLL
GANABENSG00000089597.125521.332906630.92320-0.264202.380401.49760HepG2HNRNPM
GANABENSG00000089597.124569.353907733.67050-0.7592031.3009029.45000HepG2HNRNPU
GANABENSG00000089597.125465.407406978.79410-0.352603.447401.63190HepG2CCAR2
GANABENSG00000089597.128050.8862011103.48750-0.463804.816503.95880HepG2MAGOH
GANABENSG00000089597.127112.2710011165.30560-0.650607.911706.88960HepG2MATR3
GANABENSG00000089597.122979.0195011428.04540-1.9397063.7080060.94160HepG2NCBP2
GANABENSG00000089597.125978.359403736.573200.677907.699206.49460HepG2NSUN2
GANABENSG00000089597.129012.2409010497.78350-0.220103.687503.00810HepG2PCBP1
GANABENSG00000089597.125672.284407568.91770-0.416202.431901.45530HepG2PCBP2
GANABENSG00000089597.129333.692108183.093400.189702.567201.81950HepG2PRPF4
GANABENSG00000089597.123456.565305277.93190-0.610608.120506.81940HepG2PRPF8
GANABENSG00000089597.126752.6441010682.02170-0.6617026.9357025.57120HepG2PTBP1
GANABENSG00000089597.129530.8936011133.11010-0.224201.919601.41020HepG2PUF60
GANABENSG00000089597.129523.8445011818.59950-0.311409.163708.21670HepG2PUM1
GANABENSG00000089597.127304.761109342.91850-0.355008.699607.70870HepG2PUS1
GANABENSG00000089597.1210097.0705011568.60670-0.196302.210001.64060HepG2QKI
GANABENSG00000089597.123150.748707303.58870-1.2129012.6649011.25270HepG2RAVER1
GANABENSG00000089597.127432.073709558.05850-0.363005.644704.47320HepG2RBM15
GANABENSG00000089597.126569.2973012069.77000-0.8776038.0870036.59760HepG2RBM22
GANABENSG00000089597.129065.8277010499.36240-0.211801.948401.37470HepG2RBM25
GANABENSG00000089597.126372.118709313.60910-0.547607.074405.48120HepG2RBM27
GANABENSG00000089597.125839.981907563.05240-0.373003.036001.92460HepG2RCC2
GANABENSG00000089597.127752.8060011887.95280-0.6167024.4682023.17800HepG2NELFE
GANABENSG00000089597.129187.5508011072.21510-0.269205.417504.59110HepG2RECQL
GANABENSG00000089597.126163.616907705.62530-0.322103.601302.83950HepG2RPLP0
GANABENSG00000089597.123808.632205368.62820-0.495307.883506.90840HepG2RPS19
GANABENSG00000089597.126156.929408589.78580-0.480405.758404.63010HepG2RPS2
GANABENSG00000089597.125832.944807558.90750-0.374002.319701.58480HepG2RPS3A
GANABENSG00000089597.126987.376708768.12400-0.327502.877601.77960HepG2RPS5
GANABENSG00000089597.123092.349805220.88730-0.7556010.488409.10530HepG2RRP9
GANABENSG00000089597.126624.198903507.493200.917202.878501.49160HepG2SF1
GANABENSG00000089597.125696.353408751.82090-0.619505.223004.27780HepG2SF3A3
GANABENSG00000089597.127949.0009011121.12230-0.4845015.7729014.53910HepG2SF3B4
GANABENSG00000089597.1212876.0086010675.556600.270307.987006.88870HepG2SLBP
GANABENSG00000089597.126562.411808031.32640-0.291407.681606.69320HepG2SMN1
GANABENSG00000089597.127389.8145013632.28500-0.8834060.9799059.41880HepG2SRFBP1
GANABENSG00000089597.1210120.9074011608.14230-0.197803.597003.07490HepG2SRSF1
GANABENSG00000089597.126153.445607027.17950-0.191603.051302.32630HepG2SRSF7
GANABENSG00000089597.129468.2823011835.91820-0.322007.926407.14470HepG2SSB
GANABENSG00000089597.126955.956209176.22540-0.399703.223001.84680HepG2SSRP1
GANABENSG00000089597.129780.2693012501.40630-0.3541011.013409.91150HepG2SUCLG1
GANABENSG00000089597.128442.890306488.882900.379704.376903.20760HepG2SUPT6H
GANABENSG00000089597.125724.971604108.278300.478604.304403.42600HepG2TARDBP
GANABENSG00000089597.125842.749907514.07170-0.362905.457504.80310HepG2TIAL1
GANABENSG00000089597.124218.352008221.86180-0.9628010.644709.39210HepG2U2AF1
GANABENSG00000089597.129099.8278011513.55870-0.339402.544501.74230HepG2UBE2L3
GANABENSG00000089597.122870.583704023.75870-0.487205.260904.20840HepG2UCHL5
GANABENSG00000089597.126775.112407977.66930-0.235703.553902.38290HepG2UTP18
GANABENSG00000089597.126474.595407493.44120-0.210803.574702.90910HepG2UTP3
GANABENSG00000089597.125107.065406770.63320-0.406802.518601.47950HepG2XPO5
GANABENSG00000089597.124805.517007183.02340-0.579904.528302.90230HepG2XRCC5
GANABENSG00000089597.124384.533208536.18950-0.9612040.7110039.25120HepG2ZNF622
GANABENSG00000089597.125750.464407926.95560-0.463106.666704.78630K562AARS
GANABENSG00000089597.1220741.9598015719.744400.3999012.3531011.24790K562AGGF1
GANABENSG00000089597.1220734.6156017273.810100.263402.568501.62700K562AKAP8
GANABENSG00000089597.1212153.8211015484.28860-0.349403.802203.13590K562AQR
GANABENSG00000089597.129460.8848010794.47760-0.190202.995701.99830K562BCLAF1
GANABENSG00000089597.1215037.4979012861.585600.225403.480502.23510K562CPEB4
GANABENSG00000089597.1215631.2142013309.362900.231903.876303.12340K562DDX47
GANABENSG00000089597.1215843.7250012383.190600.355407.163806.08580K562EIF2S2
GANABENSG00000089597.129348.967507857.869200.250603.474602.58820K562EIF3G
GANABENSG00000089597.128886.7788010864.47130-0.289902.761001.94090K562EIF4A3
GANABENSG00000089597.124250.489507530.26550-0.8251013.5703010.89800K562FKBP4
GANABENSG00000089597.128396.0553011298.62670-0.4284010.076809.00590K562FXR1
GANABENSG00000089597.126442.047309150.17990-0.506303.337102.54650K562G3BP2
GANABENSG00000089597.126580.109308673.77750-0.398505.650304.82710K562HNRNPC
GANABENSG00000089597.128918.0933011470.53560-0.363103.404002.01650K562HNRNPK
GANABENSG00000089597.1214588.6136012027.830800.278403.010901.90420K562HNRNPL
GANABENSG00000089597.1212181.6361015143.73510-0.314005.145203.91300K562HNRNPU
GANABENSG00000089597.1221326.1544017358.865700.296903.665302.69820K562KIF1C
GANABENSG00000089597.129459.0952012071.11330-0.351804.302303.25160K562MAGOH
GANABENSG00000089597.1220302.1094016616.836900.288902.926801.81400K562MAK16
GANABENSG00000089597.1217151.3303013630.488000.331402.170001.41000K562NAA15
GANABENSG00000089597.1213352.3197011931.932100.162204.280203.37400K562NSUN2
GANABENSG00000089597.1217476.598109540.654200.873205.185403.71350K562PABPN1
GANABENSG00000089597.127946.3639010739.64950-0.434605.950404.50140K562PCBP2
GANABENSG00000089597.1218615.7228011339.727500.715003.191801.58240K562PPP1R8
GANABENSG00000089597.126205.751409858.28840-0.6677011.296909.77440K562PRPF8
GANABENSG00000089597.128946.7808011728.10950-0.390505.662404.74170K562PTBP1
GANABENSG00000089597.1222690.4326016221.479100.484107.049706.22940K562PUS1
GANABENSG00000089597.1220825.1736015805.659400.397808.266507.27000K562RBM15
GANABENSG00000089597.127565.1822011243.90510-0.571708.900207.25740K562RBM22
GANABENSG00000089597.128350.620907095.391800.234902.523301.57960K562RCC2
GANABENSG00000089597.129482.9188011832.86790-0.319402.798301.69840K562NELFE
GANABENSG00000089597.128844.945907739.431000.192503.270501.54720K562RPS10
GANABENSG00000089597.1216500.020708723.384100.919404.592802.92390K562SF1
GANABENSG00000089597.125782.768207241.26410-0.324502.382201.48470K562SF3B1
GANABENSG00000089597.1216993.5770010632.167800.676502.866801.53160K562SFPQ
GANABENSG00000089597.1215351.7688010021.053300.615302.441701.31890K562SNRNP200
GANABENSG00000089597.1219034.8402011984.837000.667302.826901.38170K562SUPT6H
GANABENSG00000089597.129300.803107480.120900.314202.601901.69700K562TIAL1
GANABENSG00000089597.1210066.762207946.597800.341103.728202.59950K562TRIM56
GANABENSG00000089597.126280.970009155.17680-0.543604.754303.70500K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GANAB is not available on ENCORE database.





29 RBPs can affect the splicing of GANAB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.140000.000130.07142includedK562TAF15
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.055000.000100.01497includedHepG2G3BP1
SEGANABENSG00000089597.12chr11-624017816240184762400916624009866240229262402472-0.091000.000010.01278excludedK562IGF2BP2
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.113000.001360.02692includedK562SF3B4
SEGANABENSG00000089597.12chr11-623976686239774862397285623974296239807262398173-0.077000.000000.00010excludedK562PRPF8
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.061000.000480.03422includedHepG2RBM22
SEGANABENSG00000089597.12chr11-6240178162401938624009136240098662402292624024720.066000.000210.05134includedK562WDR3
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.417000.000000.00000includedHepG2U2AF1
SEGANABENSG00000089597.12chr11-623945196239461862394331623944066239476062394825-0.098000.000250.00629excludedHepG2U2AF1
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.058000.000740.06106includedHepG2QKI
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.614000.000000.00000includedHepG2U2AF2
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.106000.000000.00000includedHepG2AKAP1
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.084000.000000.00013includedHepG2DDX3X
SEGANABENSG00000089597.12chr11-624017816240184762400916624009866240229262402472-0.067000.000110.02935excludedK562HNRNPA1
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.103000.000000.00020includedHepG2NCBP2
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.169000.000000.00000includedHepG2PTBP1
SEGANABENSG00000089597.12chr11-623978506239797762397285623974296239807262398308-0.069000.000020.00257excludedK562EFTUD2
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.076000.000000.00021includedHepG2MATR3
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.431000.000000.00000includedK562U2AF1
SEGANABENSG00000089597.12chr11-6240740162407538624070986240720362414033624140890.062000.002060.05382includedHepG2SF3A3
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.118000.000000.00003includedHepG2SSB
SEGANABENSG00000089597.12chr11-624017816240184762400916624009866240229262402472-0.362000.000000.00479excludedK562FXR2
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.110000.000000.00000includedHepG2IGF2BP3
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.073000.000750.05482includedHepG2TIAL1
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.080000.000540.05334includedHepG2SUPV3L1
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.075000.000060.00481includedHepG2SF3B4
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.489000.000000.00000includedK562U2AF2
SEGANABENSG00000089597.12chr11-623945196239461862394331623944066239476062394825-0.065000.000000.00001excludedK562U2AF2
SEGANABENSG00000089597.12chr11-624017816240184762400916624009866240229262402472-0.088000.000050.05407excludedK562TRA2A
SEGANABENSG00000089597.12chr11-624017816240184762400916624009866240229262402472-0.068000.001840.05988excludedK562TARDBP
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.263000.000000.00000includedHepG2PRPF4
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.114000.000000.00000includedHepG2KHSRP
SEGANABENSG00000089597.12chr11-6240178162401847624009166240098662402292624024720.131000.000000.00045includedK562PTBP1
SEGANABENSG00000089597.12chr11-6240740162407538624070986240720362414033624140890.058000.002880.04514includedK562HNRNPC
A3SSGANABENSG00000089597.12chr11-6240178162401938624017816240184762402292624024720.230000.000000.00731longerK562HNRNPA1
A3SSGANABENSG00000089597.12chr11-6240091662401121624009166240098662402292624024720.191000.000000.00000longerHepG2U2AF2
A3SSGANABENSG00000089597.12chr11-6239476062394855623947606239482562396240623964840.064000.000000.00000longerK562AQR
A3SSGANABENSG00000089597.12chr11-6240176362401938624017636240184762402292624024720.120000.006670.03721longerK562AQR
A3SSGANABENSG00000089597.12chr11-6240645462406604624064546240658262406830624069770.064000.000000.00000longerK562AQR
A3SSGANABENSG00000089597.12chr11-6240091362401121624009136240098662401781624018470.108000.000920.00645longerK562AQR
A3SSGANABENSG00000089597.12chr11-6240091662401121624009166240098662402292624024720.159000.000000.00000longerHepG2U2AF1
A3SSGANABENSG00000089597.12chr11-6240091662401121624009166240098662402292624024720.134000.000000.00000longerK562U2AF1
A3SSGANABENSG00000089597.12chr11-624017816240193862401781624018476240229262402472-0.112000.002140.08015shorterK562U2AF1
MXEGANABENSG00000089597.12chr11-6239476062394825623962406239648462394331623944066239666562396767-0.080000.000310.008342includedHepG2U2AF1
MXEGANABENSG00000089597.12chr11-62396240623964846239666562396767623947606239482562397059623971560.136000.000000.000131includedK562EFTUD2
MXEGANABENSG00000089597.12chr11-6240683062406939624070986240720362406454624065826241403362414088-0.140000.000000.000312includedHepG2SSB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GANAB is not avaliable on ENCORE database.