PGM1

General Information

Gene Name       : PGM1
Gene ID             : ENSG00000079739.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PGM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PGM1ENSG00000079739.1630.8135.7933.30ENCSR000AEF
HepG2PGM1ENSG00000079739.1645.1341.9843.55ENCSR985KAT
K562PGM1ENSG00000079739.160.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PGM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PGM1 RNA is bound by 11 proteins.  







eCLIP assay for PGM1 is not avaliable on ENCORE database.





11 proteins are bound to PGM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16409511764095157+3'-UTR,CDS3.291043.80299HepG2GRWD1
chr16409519564095220+3'-UTR,CDS4.010673.11282HepG2G3BP1
chr16412527864125345+3'-UTR,CDS3.494236.76273HepG2G3BP1
chr16409571164095753+3'-UTR,CDS3.652215.41973HepG2G3BP1
chr16412535064125408+3'-UTR3.589443.97184HepG2G3BP1
chr16409512864095174+3'-UTR,CDS3.872825.35703HepG2BCLAF1
chr16405907264059149+5'-UTR4.028018.30191HepG2DDX3X
chr16411425764114307+CDS3.757165.14242HepG2G3BP1
chr16411742064117473+CDS4.440266.59937HepG2LIN28B
chr16410195564102057+CDS5.263417.77669HepG2G3BP1
chr16410190764102016+CDS4.585589.30334HepG2RPS3
chr16411739064117420+CDS4.9985510.60872HepG2LIN28B
chr16411737964117390+CDS4.307315.47334HepG2LIN28B
chr16410059164100691+CDS,intron-Proximal3.749688.12130HepG2PPIG
chr16411733964117383+CDS,intron-Proximal4.839235.71225HepG2G3BP1
chr16411418764114203+CDS,intron-Proximal3.837633.11149HepG2G3BP1
chr16411738364117459+CDS4.248609.10244HepG2G3BP1
chr16406519364065277+intron-Distal4.382683.18711HepG2ILF3
chr16406266364062792+intron-Distal4.250135.61812HepG2CSTF2
chr16406194464062043+intron-Distal4.591383.92497HepG2UPF1
chr16408952364089672+intron-Distal,intron-Proximal3.474753.35377HepG2QKI
chr16410786564108031+intron-Distal3.294803.22526HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PGM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PGM1 is not available on ENCORE database.

  • 110 RBPs can affect the levels of PGM1.  








The Knockdown/knockout RNA-Seq assay for PGM1 is not available on ENCORE database.





110 RBPs can affect the gene expression of PGM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PGM1ENSG00000079739.111515.787302018.45110-0.413204.192702.90150HepG2AATF
PGM1ENSG00000079739.111826.944502709.28490-0.568504.799404.03990HepG2ACO1
PGM1ENSG00000079739.112556.697504015.75630-0.651406.961606.16000HepG2AKAP1
PGM1ENSG00000079739.111644.962102453.65200-0.576905.702104.23240HepG2AKAP8
PGM1ENSG00000079739.112513.115203322.64520-0.402903.528802.64360HepG2ASCC1
PGM1ENSG00000079739.113914.003303208.591300.286604.732903.87560HepG2AUH
PGM1ENSG00000079739.111860.849201448.628800.361202.475301.62540HepG2BCLAF1
PGM1ENSG00000079739.111915.419902708.07270-0.499604.125303.34430HepG2CKAP4
PGM1ENSG00000079739.11724.348501831.14810-1.3380015.1843013.45560HepG2CNOT7
PGM1ENSG00000079739.112365.156301172.854301.0118019.0754017.46630HepG2CPSF6
PGM1ENSG00000079739.112393.948401791.298200.418306.663705.09450HepG2YBX3
PGM1ENSG00000079739.11668.410701029.76200-0.623506.579405.02690HepG2CSTF2
PGM1ENSG00000079739.113788.991903122.592500.279006.093405.05350HepG2DAZAP1
PGM1ENSG00000079739.111452.589802226.98890-0.616508.791107.65240HepG2DDX21
PGM1ENSG00000079739.115077.463403846.670500.400403.524002.82720HepG2DDX3X
PGM1ENSG00000079739.111247.067801735.70310-0.477005.799703.92170HepG2DDX52
PGM1ENSG00000079739.111185.967701639.22820-0.467003.573002.70860HepG2DDX55
PGM1ENSG00000079739.112414.772601696.455400.509306.360204.91770HepG2DHX30
PGM1ENSG00000079739.112038.526602591.89020-0.346502.182501.57000HepG2DKC1
PGM1ENSG00000079739.111442.681701758.88490-0.285903.104202.36350HepG2DNAJC21
PGM1ENSG00000079739.111627.425902070.79740-0.347602.661801.75490HepG2EEF2
PGM1ENSG00000079739.111346.180401726.21440-0.358702.787201.67470HepG2EFTUD2
PGM1ENSG00000079739.11933.006301680.96270-0.8493010.791309.13580HepG2EIF3D
PGM1ENSG00000079739.111653.226602103.01750-0.347203.706302.47870HepG2EIF3G
PGM1ENSG00000079739.112356.426803510.33830-0.575005.571604.66520HepG2EIF4A3
PGM1ENSG00000079739.111953.072603418.06640-0.807408.117506.97020HepG2EIF4B
PGM1ENSG00000079739.113860.454802951.257600.387304.034203.06410HepG2EIF4G2
PGM1ENSG00000079739.111840.899603683.89170-1.0008044.9195043.05010HepG2ETF1
PGM1ENSG00000079739.111948.115601502.488400.374604.277002.79610HepG2FAM120A
PGM1ENSG00000079739.111334.366302963.97580-1.151407.217506.03520HepG2FIP1L1
PGM1ENSG00000079739.111881.324601364.387300.463403.495402.07730HepG2FKBP4
PGM1ENSG00000079739.112037.519601174.983300.794103.577102.41650HepG2FTO
PGM1ENSG00000079739.114408.077002315.234600.9289021.4904019.41170HepG2FUBP3
PGM1ENSG00000079739.112884.488203542.19550-0.296302.146101.53310HepG2FXR1
PGM1ENSG00000079739.111526.008603285.68940-1.1064019.4023017.71570HepG2G3BP1
PGM1ENSG00000079739.114258.239403488.463200.287602.152701.37330HepG2G3BP2
PGM1ENSG00000079739.111179.056201496.66140-0.344102.562001.70540HepG2GEMIN5
PGM1ENSG00000079739.111365.243701834.43110-0.426203.722402.53650HepG2GNB2L1
PGM1ENSG00000079739.111044.548001775.73610-0.7655012.0993010.90230HepG2HNRNPA1
PGM1ENSG00000079739.112541.956201685.166900.592906.093005.08400HepG2HNRNPF
PGM1ENSG00000079739.114046.043502844.346900.5083018.5369016.93760HepG2HNRNPL
PGM1ENSG00000079739.111094.634501962.13530-0.8420025.7900024.09770HepG2HNRNPU
PGM1ENSG00000079739.112547.379601659.387900.6183010.181408.87700HepG2IGF2BP1
PGM1ENSG00000079739.111964.609603339.75450-0.7655011.051609.79710HepG2IGF2BP2
PGM1ENSG00000079739.112245.577902004.253300.163902.063701.41960HepG2ILF2
PGM1ENSG00000079739.112105.255003196.69610-0.602605.239504.08510HepG2LARP4
PGM1ENSG00000079739.11860.951803563.19920-2.0492056.4235053.90050HepG2MATR3
PGM1ENSG00000079739.11829.244501759.23430-1.0851010.533508.60820HepG2METAP2
PGM1ENSG00000079739.111563.259702397.69920-0.617104.880403.82640HepG2MSI2
PGM1ENSG00000079739.112893.720403647.07820-0.333802.423001.82790HepG2NCBP2
PGM1ENSG00000079739.112130.143801624.999400.390403.668102.02740HepG2NIP7
PGM1ENSG00000079739.112136.806803096.37320-0.535109.584408.18910HepG2NOL12
PGM1ENSG00000079739.112599.224901125.016201.2080027.5802025.61770HepG2NSUN2
PGM1ENSG00000079739.111140.263401942.15640-0.7683020.5347018.64920HepG2PARN
PGM1ENSG00000079739.112609.394303415.16890-0.388207.554306.62950HepG2PCBP1
PGM1ENSG00000079739.11935.121802329.55940-1.3168016.9586014.73140HepG2PCBP2
PGM1ENSG00000079739.114047.146002226.484800.8620033.7525031.65460HepG2PRPF4
PGM1ENSG00000079739.111665.242502448.84150-0.556403.621302.23770HepG2PRPF6
PGM1ENSG00000079739.11551.806801264.42150-1.1962019.0368017.19670HepG2PRPF8
PGM1ENSG00000079739.112434.811503475.22130-0.5133012.1691011.18290HepG2PTBP1
PGM1ENSG00000079739.111339.086703137.86440-1.2285072.1893070.03260HepG2PUM1
PGM1ENSG00000079739.111758.866803135.50860-0.8341020.4854018.76460HepG2PUM2
PGM1ENSG00000079739.113384.750102759.491100.294502.531001.93480HepG2PUS1
PGM1ENSG00000079739.112698.682303763.41100-0.479808.474307.47220HepG2QKI
PGM1ENSG00000079739.111405.737402247.75150-0.677204.120103.26790HepG2RAVER1
PGM1ENSG00000079739.111831.125803344.34070-0.8690022.1541020.14030HepG2RBM15
PGM1ENSG00000079739.11888.396303079.05190-1.7932097.4033095.20910HepG2RBM22
PGM1ENSG00000079739.111730.003702167.06660-0.325002.403801.48680HepG2RBM27
PGM1ENSG00000079739.112373.813603867.45530-0.7042022.8316021.57200HepG2NELFE
PGM1ENSG00000079739.112798.039403602.24910-0.364506.865905.95820HepG2RECQL
PGM1ENSG00000079739.111012.006401815.64450-0.8433013.2147011.92270HepG2RPLP0
PGM1ENSG00000079739.11659.355401635.71900-1.3108033.3621031.63430HepG2RPS19
PGM1ENSG00000079739.111191.792901998.62460-0.7459010.341408.88040HepG2RPS2
PGM1ENSG00000079739.111215.163101839.19760-0.597904.558603.53330HepG2RPS3A
PGM1ENSG00000079739.111311.557702040.14590-0.637407.778505.98970HepG2RPS5
PGM1ENSG00000079739.11563.544401250.76370-1.1502016.0519014.44030HepG2RRP9
PGM1ENSG00000079739.111736.440402446.22430-0.494402.909301.34840HepG2RTF1
PGM1ENSG00000079739.112723.831201747.358100.6404020.6596019.12880HepG2SAFB2
PGM1ENSG00000079739.111028.194201641.59080-0.675008.184106.59560HepG2SERBP1
PGM1ENSG00000079739.111809.737003728.92290-1.0430013.0148011.48860HepG2SF3A3
PGM1ENSG00000079739.111700.648801255.624700.437603.497002.71310HepG2SF3B1
PGM1ENSG00000079739.111927.602203617.86830-0.9083036.5388034.84230HepG2SF3B4
PGM1ENSG00000079739.113892.149502834.406700.4574014.6560013.26860HepG2SLBP
PGM1ENSG00000079739.111391.486902037.69770-0.5503015.4542014.12290HepG2SMN1
PGM1ENSG00000079739.111861.133203776.38790-1.0208042.1092040.74500HepG2SRSF1
PGM1ENSG00000079739.112191.140202918.59100-0.413607.780406.80120HepG2SRSF5
PGM1ENSG00000079739.112004.519201655.691700.275702.456001.79730HepG2SRSF7
PGM1ENSG00000079739.111655.062503072.39310-0.8925035.9800034.41790HepG2SRSF9
PGM1ENSG00000079739.111401.967102100.66680-0.583404.004702.54290HepG2SUB1
PGM1ENSG00000079739.112303.367403319.13690-0.5271010.632009.54520HepG2SUCLG1
PGM1ENSG00000079739.112945.153702000.433000.557906.970005.52620HepG2SUPT6H
PGM1ENSG00000079739.11723.699701631.79430-1.1730017.9857016.52070HepG2SUPV3L1
PGM1ENSG00000079739.113872.885103394.688200.190002.171901.66430HepG2TAF15
PGM1ENSG00000079739.111851.400301236.957500.581705.149404.20540HepG2TARDBP
PGM1ENSG00000079739.11775.019101906.51640-1.2986039.4605037.97530HepG2TIAL1
PGM1ENSG00000079739.111303.019602257.50070-0.792907.129604.84550HepG2TRA2A
PGM1ENSG00000079739.112507.811301923.628700.382507.117606.28590HepG2TRIM56
PGM1ENSG00000079739.112255.030402887.90450-0.356903.846202.79790HepG2TUFM
PGM1ENSG00000079739.111475.902602534.83420-0.780305.929605.02710HepG2U2AF1
PGM1ENSG00000079739.11934.621303056.91150-1.7096041.4392038.45860HepG2UBE2L3
PGM1ENSG00000079739.11512.23180963.92920-0.9121011.308809.79340HepG2UCHL5
PGM1ENSG00000079739.112176.405003192.75850-0.5529011.7660010.66630HepG2UTP3
PGM1ENSG00000079739.111267.596702210.89840-0.802507.359705.35610HepG2XRCC5
PGM1ENSG00000079739.111682.103702472.25100-0.555603.922002.66070HepG2XRCC6
PGM1ENSG00000079739.112095.771301606.323500.383602.903302.16030HepG2XRN2
PGM1ENSG00000079739.111772.583002197.24500-0.309805.252204.37560HepG2ZC3H8
PGM1ENSG00000079739.112611.923603637.04710-0.477709.783608.91310HepG2ZNF622
PGM1ENSG00000079739.110.3903017.47300-5.484404.850003.92730K562UPF1
PGM1ENSG00000079739.110.5334014.95070-4.808803.825702.79140K562WDR3
PGM1ENSG00000079739.110.9970015.54960-3.963203.621202.66200K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PGM1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PGM1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PGM1 is not avaliable on ENCORE database.