MCM3AP-AS1

General Information

Gene Name       : MCM3AP-AS1
Gene ID             : ENSG00000215424.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MCM3AP-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MCM3AP-AS1ENSG00000215424.93.853.473.66ENCSR000AEF
HepG2MCM3AP-AS1ENSG00000215424.92.323.342.83ENCSR985KAT
K562MCM3AP-AS1ENSG00000215424.914.4916.0415.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MCM3AP-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MCM3AP-AS1 RNA is bound by 8 proteins.  







eCLIP assay for MCM3AP-AS1 is not avaliable on ENCORE database.





8 proteins are bound to MCM3AP-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr214765359247653648+intron-Distal3.216733.06830K562SAFB2
chr214764948447649531+intron-Distal4.073683.02181K562PRPF8
chr214765416947654235+intron-Distal3.645845.49916K562SAFB2
chr214765410447654169+intron-Distal4.498476.48449K562SAFB2
chr214767082747670892+intron-Distal4.220583.59941K562UCHL5
chr214764963547649760+intron-Distal6.0041513.02800K562SLTM
chr214765048847650535+intron-Distal,intron-Proximal3.183553.67498K562SAFB2
chr214764945247649529+intron-Distal4.873386.20441HepG2HLTF
chr214764947447649541+intron-Distal5.5376110.97996K562SLTM
chr214765412247654159+intron-Distal4.066173.10243K562SLTM
chr214765083747650893+intron-Distal3.539934.90935K562SAFB2
chr214765492847655021+intron-Distal4.602945.13876K562SAFB2
chr214766454547664608+intron-Distal3.980213.19638K562SAFB2
chr214765423547654297+intron-Distal3.824816.16438K562SAFB2
chr214765159547651642+intron-Distal4.183094.07784K562SAFB2
chr214764939447649474+intron-Distal3.9667210.15551K562SLTM
chr214764964447649770+intron-Distal3.250146.77461K562SAFB2
chr214764940147649525+intron-Distal4.009483.85108HepG2GTF2F1
chr214764946547649533+intron-Distal4.233433.96990K562BUD13
chr214765248347652536+intron-Distal4.266085.16344K562SAFB2
chr214765121347651287+intron-Distal4.689576.44643K562SAFB2
chr214766449447664535+intron-Distal3.532624.21638K562SLTM
chr214764932947649403+intron-Distal,intron-Proximal3.844163.63122HepG2PRPF4
chr214764932647649392+intron-Distal,intron-Proximal4.555168.80659K562SLTM
chr214765269047652838+intron-Distal3.711887.18036K562SAFB2
chr214765174247651859+intron-Distal3.490319.83742K562SAFB2
chr214766030747660377+intron-Distal3.090353.06830K562SAFB2
chr214765061447650668+intron-Distal4.194633.22483K562SAFB2
chr214766355047663664+intron-Distal4.244423.84914K562SLTM
chr214764942047649454+intron-Distal3.127483.86112K562SAFB2
chr214765391747654028+intron-Distal5.5943713.10752K562SAFB2
chr214766468947664755+intron-Distal4.032625.71515K562SLTM
chr214767630647676381+intron-Distal4.711675.77100K562SLTM
chr214765182947651876+intron-Distal4.108623.36882K562SLTM
chr214765189147651992+intron-Distal4.1116712.43236K562SAFB2
chr214764915547649226+intron-Proximal3.633356.82513HepG2PRPF8
chr214764922647649277+intron-Proximal4.937936.12311K562SLTM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MCM3AP-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MCM3AP-AS1 is not available on ENCORE database.

  • 88 RBPs can affect the levels of MCM3AP-AS1.  








The Knockdown/knockout RNA-Seq assay for MCM3AP-AS1 is not available on ENCORE database.





88 RBPs can affect the gene expression of MCM3AP-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MCM3AP-AS1ENSG00000215424.562.75180121.38090-0.951804.059903.34940HepG2ACO1
MCM3AP-AS1ENSG00000215424.527.00270156.09510-2.5313014.5054013.38630HepG2AKAP1
MCM3AP-AS1ENSG00000215424.556.35020122.70340-1.122704.104803.17360HepG2CIRBP
MCM3AP-AS1ENSG00000215424.565.56110117.49050-0.841602.314301.61830HepG2CNOT7
MCM3AP-AS1ENSG00000215424.5172.7794085.818001.009504.713403.83700HepG2CPSF6
MCM3AP-AS1ENSG00000215424.544.7837092.92230-1.053103.235002.55040HepG2CELF1
MCM3AP-AS1ENSG00000215424.532.26710149.51590-2.2122012.9180011.65960HepG2DDX3X
MCM3AP-AS1ENSG00000215424.5225.21190120.309000.904405.131703.78850HepG2DDX5
MCM3AP-AS1ENSG00000215424.570.15280128.46420-0.872802.785102.16540HepG2DDX6
MCM3AP-AS1ENSG00000215424.5194.29220116.131900.742403.679402.91900HepG2DKC1
MCM3AP-AS1ENSG00000215424.543.1848081.82580-0.922002.414101.38120HepG2EFTUD2
MCM3AP-AS1ENSG00000215424.534.8207079.67780-1.194203.252402.27880HepG2EIF3D
MCM3AP-AS1ENSG00000215424.5227.11480132.863100.773402.971502.26030HepG2EIF4B
MCM3AP-AS1ENSG00000215424.560.02460118.62200-0.982703.774902.79920HepG2EWSR1
MCM3AP-AS1ENSG00000215424.558.74250139.18200-1.244504.536903.56860HepG2FIP1L1
MCM3AP-AS1ENSG00000215424.536.7454070.94330-0.949102.184101.39440HepG2GEMIN5
MCM3AP-AS1ENSG00000215424.5248.8606097.275201.355108.370907.30130HepG2GPKOW
MCM3AP-AS1ENSG00000215424.568.10550115.89160-0.766902.985101.97410HepG2HDGF
MCM3AP-AS1ENSG00000215424.5139.8911071.026700.977803.632002.84570HepG2HNRNPC
MCM3AP-AS1ENSG00000215424.5285.4794092.832101.6206013.5217012.27120HepG2HNRNPLL
MCM3AP-AS1ENSG00000215424.5120.5977080.302600.586601.988901.36760HepG2IGF2BP1
MCM3AP-AS1ENSG00000215424.5250.46820129.809900.948105.341604.43060HepG2IGF2BP2
MCM3AP-AS1ENSG00000215424.587.07620141.76640-0.703202.233001.66120HepG2NCBP2
MCM3AP-AS1ENSG00000215424.5252.4469082.317901.6166012.4304010.95530HepG2NSUN2
MCM3AP-AS1ENSG00000215424.533.41780107.38840-1.684106.343304.96300HepG2PABPC1
MCM3AP-AS1ENSG00000215424.5178.21910103.752100.780403.351302.69680HepG2PCBP1
MCM3AP-AS1ENSG00000215424.5183.42820123.636100.569002.562801.96370HepG2PUS1
MCM3AP-AS1ENSG00000215424.5178.53850114.359400.642602.015901.47010HepG2QKI
MCM3AP-AS1ENSG00000215424.555.95490105.88570-0.920202.068101.45070HepG2RAVER1
MCM3AP-AS1ENSG00000215424.582.80250130.21680-0.653202.008701.54860HepG2RBM22
MCM3AP-AS1ENSG00000215424.5165.19040103.940000.668302.179901.33920HepG2RPS10
MCM3AP-AS1ENSG00000215424.538.5781077.52850-1.006902.660202.05630HepG2RPS19
MCM3AP-AS1ENSG00000215424.584.36540184.19280-1.126506.072105.04990HepG2SF3A3
MCM3AP-AS1ENSG00000215424.5167.3440090.686500.883802.255101.61070HepG2SLBP
MCM3AP-AS1ENSG00000215424.5233.81010102.236001.193305.682304.55350HepG2SNRNP70
MCM3AP-AS1ENSG00000215424.598.48080147.07620-0.578602.077401.62360HepG2SRFBP1
MCM3AP-AS1ENSG00000215424.5151.6684093.323100.700502.272101.76180HepG2SRSF9
MCM3AP-AS1ENSG00000215424.5341.10710127.698801.4174017.8033016.74050HepG2SSB
MCM3AP-AS1ENSG00000215424.5167.3530044.285901.917908.564307.48190HepG2SUPV3L1
MCM3AP-AS1ENSG00000215424.5166.9264090.499000.883103.761702.93250HepG2TARDBP
MCM3AP-AS1ENSG00000215424.5157.2757068.552301.197906.450705.74670HepG2TIAL1
MCM3AP-AS1ENSG00000215424.541.88240119.07860-1.507505.931605.02890HepG2U2AF1
MCM3AP-AS1ENSG00000215424.534.71830140.00600-2.011702.676201.70480HepG2U2AF2
MCM3AP-AS1ENSG00000215424.5158.63770107.957900.555202.220201.60890HepG2ZC3H8
MCM3AP-AS1ENSG00000215424.5223.38500594.56120-1.4123024.7730023.18510K562AGGF1
MCM3AP-AS1ENSG00000215424.5349.38680653.28540-0.9029010.782008.50770K562AKAP8
MCM3AP-AS1ENSG00000215424.5224.57120618.65620-1.4620018.8264016.82280K562AKAP8L
MCM3AP-AS1ENSG00000215424.5415.10510563.97260-0.442102.582302.01080K562AQR
MCM3AP-AS1ENSG00000215424.5373.52630649.09720-0.7972010.478708.56570K562ATP5C1
MCM3AP-AS1ENSG00000215424.5358.13060540.83580-0.594704.125903.05630K562BOP1
MCM3AP-AS1ENSG00000215424.5496.26350710.57130-0.517904.995403.36920K562CCDC124
MCM3AP-AS1ENSG00000215424.5162.81450246.06150-0.595803.232802.10040K562DDX3X
MCM3AP-AS1ENSG00000215424.5646.79850798.26510-0.303602.598701.96480K562DDX47
MCM3AP-AS1ENSG00000215424.5315.96850665.79170-1.0753017.9619015.34970K562DKC1
MCM3AP-AS1ENSG00000215424.5214.43130363.86580-0.762904.944003.70670K562EFTUD2
MCM3AP-AS1ENSG00000215424.5361.20140270.238900.418502.516101.37460K562EIF2S1
MCM3AP-AS1ENSG00000215424.5306.93400486.66860-0.665006.446805.41610K562EIF2S2
MCM3AP-AS1ENSG00000215424.5222.75150389.65950-0.806805.041703.59430K562EIF3D
MCM3AP-AS1ENSG00000215424.5240.41340578.26660-1.2662016.6520014.37580K562FIP1L1
MCM3AP-AS1ENSG00000215424.5409.74990585.11230-0.514003.595502.61610K562FMR1
MCM3AP-AS1ENSG00000215424.5345.96500267.328300.371901.876201.35880K562FXR1
MCM3AP-AS1ENSG00000215424.5565.84420404.021700.485903.763202.50950K562HNRNPA1
MCM3AP-AS1ENSG00000215424.5242.14280543.72010-1.167006.340204.22930K562HNRNPA2B1
MCM3AP-AS1ENSG00000215424.5204.67660348.80630-0.769104.959103.25220K562HNRNPK
MCM3AP-AS1ENSG00000215424.5985.46910721.369700.450004.162802.83850K562HNRNPL
MCM3AP-AS1ENSG00000215424.5462.88060784.04370-0.760308.129306.78180K562HSPD1
MCM3AP-AS1ENSG00000215424.5240.91680355.15100-0.559903.513102.13100K562IGF2BP3
MCM3AP-AS1ENSG00000215424.5278.10650656.58980-1.2394016.9738014.25570K562KIF1C
MCM3AP-AS1ENSG00000215424.5270.87510367.01230-0.438202.403001.61700K562MAGOH
MCM3AP-AS1ENSG00000215424.5283.30620628.48480-1.1495011.872309.15650K562MAK16
MCM3AP-AS1ENSG00000215424.5355.61570735.54080-1.0485011.980809.87490K562MBNL1
MCM3AP-AS1ENSG00000215424.5379.25330535.93060-0.498903.570402.56950K562METAP2
MCM3AP-AS1ENSG00000215424.5668.82190519.040600.365703.097702.24450K562MTPAP
MCM3AP-AS1ENSG00000215424.5181.54770515.55720-1.5058014.6441012.10500K562NAA15
MCM3AP-AS1ENSG00000215424.5242.72770358.35640-0.562102.824901.51370K562NONO
MCM3AP-AS1ENSG00000215424.5811.01150576.702400.491804.243903.34110K562NSUN2
MCM3AP-AS1ENSG00000215424.5253.47760475.74900-0.908303.968002.72800K562PABPN1
MCM3AP-AS1ENSG00000215424.5422.49050656.40900-0.635705.681204.43310K562PPIG
MCM3AP-AS1ENSG00000215424.5325.26330565.75800-0.798603.182901.57590K562PPP1R8
MCM3AP-AS1ENSG00000215424.5115.68410354.08150-1.6139015.4615013.67130K562PRPF8
MCM3AP-AS1ENSG00000215424.5223.69860342.52240-0.614603.766302.68810K562PSIP1
MCM3AP-AS1ENSG00000215424.5739.587201029.73490-0.477503.910502.94530K562PUF60
MCM3AP-AS1ENSG00000215424.5868.975601073.16700-0.304502.392901.49950K562PUM2
MCM3AP-AS1ENSG00000215424.5116.22320613.62090-2.4004041.9372039.77230K562PUS1
MCM3AP-AS1ENSG00000215424.5167.75700597.81180-1.8333034.9120032.72080K562RBM15
MCM3AP-AS1ENSG00000215424.5154.76330264.04590-0.770704.537702.77240K562RBM25
MCM3AP-AS1ENSG00000215424.5206.80710312.49050-0.595503.273602.19340K562RCC2
MCM3AP-AS1ENSG00000215424.5190.69400360.72230-0.919605.869204.67500K562RPS19
MCM3AP-AS1ENSG00000215424.5174.32580435.16980-1.319805.908303.94180K562SF1
MCM3AP-AS1ENSG00000215424.5369.90290522.15870-0.497302.755301.78330K562SF3B1
MCM3AP-AS1ENSG00000215424.5162.74210289.44110-0.830706.102804.79620K562SF3B4
MCM3AP-AS1ENSG00000215424.5295.03110499.63340-0.760002.809701.57110K562SNRNP200
MCM3AP-AS1ENSG00000215424.5226.71320349.54670-0.624603.996203.15230K562SRSF1
MCM3AP-AS1ENSG00000215424.5447.31440329.451300.441102.306001.45730K562TIAL1
MCM3AP-AS1ENSG00000215424.5168.20240278.63430-0.728204.714103.67160K562U2AF2
MCM3AP-AS1ENSG00000215424.5277.83250622.06300-1.162807.778405.33810K562UTP18
MCM3AP-AS1ENSG00000215424.5472.94960658.29900-0.477103.006501.74800K562UTP3
MCM3AP-AS1ENSG00000215424.5657.83510523.232600.330202.151001.38070K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MCM3AP-AS1 is not available on ENCORE database.





3 RBPs can affect the splicing of MCM3AP-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMCM3AP-AS1ENSG00000215424.5chr21+4765613747656240476491474764918047660747476629130.641000.001210.04602includedK562FXR1
SEMCM3AP-AS1ENSG00000215424.5chr21+476502404765044147649144476491804766074747660933-0.631000.000060.05407excludedK562TRA2A
SEMCM3AP-AS1ENSG00000215424.5chr21+476561374765624047649147476491804766074747662913-0.548000.000240.00909excludedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MCM3AP-AS1 is not avaliable on ENCORE database.