RPS6KA3

General Information

Gene Name : RPS6KA3
Gene ID : ENSG00000177189.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPS6KA3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPS6KA3	ENSG00000177189.13	16.84	13.82	15.33	ENCSR000AEF
HepG2	RPS6KA3	ENSG00000177189.13	132.34	204.09	168.22	ENCSR985KAT
K562	RPS6KA3	ENSG00000177189.13	28.86	27.08	27.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPS6KA3 is not avaliable on ENCORE database.

Proteins bound to RNA

RPS6KA3 RNA is bound by 70 proteins.

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eCLIP assay for RPS6KA3 is not avaliable on ENCORE database.

70 proteins are bound to RPS6KA3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	20284914	20284964	-	5'-UTR,intron-Distal,intron-Proximal	5.50031	400.00000	HepG2	DDX3X
chrX	20284881	20284922	-	5'-UTR,intron-Distal	4.90113	400.00000	HepG2	XPO5
chrX	20284883	20284913	-	5'-UTR,intron-Distal	5.73558	400.00000	HepG2	DDX3X
chrX	20284711	20284796	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.85394	400.00000	HepG2	DDX3X
chrX	20194372	20194402	-	CDS,intron-Distal	4.08343	400.00000	HepG2	BCLAF1
chrX	20284571	20284649	-	intron-Distal	5.77090	400.00000	HepG2	EFTUD2
chrX	20228406	20228550	-	intron-Distal	6.52758	85.44518	HepG2	QKI
chrX	20284730	20284793	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.30926	84.53300	HepG2	EFTUD2
chrX	20284866	20284887	-	5'-UTR,intron-Distal	7.14105	80.33326	HepG2	PRPF4
chrX	20284495	20284555	-	intron-Distal	3.73154	77.08869	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 458 entries

eCLIP assay for RPS6KA3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPS6KA3 is not available on ENCORE database.
153 RBPs can affect the levels of RPS6KA3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPS6KA3 is not available on ENCORE database.

153 RBPs can affect the gene expression of RPS6KA3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPS6KA3	ENSG00000177189.8	5957.69190	25715.37570	-2.10980	204.41930	201.48750	HepG2	RBM22
RPS6KA3	ENSG00000177189.8	4834.11590	15304.79010	-1.66270	169.41690	165.94020	HepG2	HNRNPU
RPS6KA3	ENSG00000177189.8	11933.73520	29044.70960	-1.28320	134.38180	132.25760	HepG2	SRFBP1
RPS6KA3	ENSG00000177189.8	9891.62510	22241.52520	-1.16900	108.49440	105.99060	HepG2	PUM1
RPS6KA3	ENSG00000177189.8	4023.93770	15406.65240	-1.93690	97.69830	94.51340	HepG2	HNRNPC
RPS6KA3	ENSG00000177189.8	8594.49530	15894.34650	-0.88700	83.91660	81.41200	HepG2	SMN1
RPS6KA3	ENSG00000177189.8	14460.63120	30766.73470	-1.08920	76.38490	74.03960	HepG2	ETF1
RPS6KA3	ENSG00000177189.8	13119.61280	23527.44870	-0.84260	55.78320	53.65750	HepG2	SUCLG1
RPS6KA3	ENSG00000177189.8	5797.03610	17750.81320	-1.61450	55.75690	53.60490	HepG2	UTP3
RPS6KA3	ENSG00000177189.8	6481.46250	14871.32600	-1.19810	54.50210	52.81270	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 206 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPS6KA3 is not available on ENCORE database.

30 RBPs can affect the splicing of RPS6KA3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	0.14400	0.00000	included	HepG2	U2AF1
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	0.07200	0.00898	included	HepG2	TRA2A
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	0.05700	0.00060	included	HepG2	TBRG4
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	0.21600	0.00000	included	HepG2	U2AF2
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	0.13600	0.00000	included	HepG2	NCBP2
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20259710	20259804	20252875	20252932	20284681	20284760	0.07400	0.00000	included	HepG2	PTBP1
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	-0.06200	0.00061	excluded	HepG2	FTO
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20259710	20259804	20252875	20252932	20284681	20284760	0.15800	0.00000	included	HepG2	MATR3
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20213182	20213263	20212306	20212386	20222139	20222221	-0.18800	0.00002	excluded	K562	U2AF1
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723	20252875	20252932	20284681	20284760	0.08000	0.00001	included	HepG2	LARP4

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPS6KA3

General Information

Functions

Localization

Domains (AlphaFold: RPS6KA3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPS6KA3 is not avaliable on ENCORE database.

70 proteins are bound to RPS6KA3 RNA:

eCLIP assay for RPS6KA3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPS6KA3 is not available on ENCORE database.

153 RBPs can affect the gene expression of RPS6KA3 :

The Knockdown/knockout RNA-Seq assay for RPS6KA3 is not available on ENCORE database.

30 RBPs can affect the splicing of RPS6KA3 :

The Knockdown/knockout RNA-Seq assay for RPS6KA3 is not avaliable on ENCORE database.