LRRC16A

General Information

Gene Name       : LRRC16A
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRRC16A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRRC16A is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRRC16A RNA is bound by 3 proteins.  







eCLIP assay for LRRC16A is not avaliable on ENCORE database.





3 proteins are bound to LRRC16A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62529773225297818+intron-Distal3.881213.54208HepG2SUGP2
chr62529391125294021+intron-Distal5.0795215.48683HepG2PCBP2
chr62529713625297247+intron-Distal5.834288.32953HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRRC16A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRRC16A is not available on ENCORE database.

  • 84 RBPs can affect the levels of LRRC16A.  








The Knockdown/knockout RNA-Seq assay for LRRC16A is not available on ENCORE database.





84 RBPs can affect the gene expression of LRRC16A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRRC16AENSG00000079691.1555.12010159.39850-1.532008.899607.23850HepG2ADAR
LRRC16AENSG00000079691.15597.81040107.257402.4785035.2905033.67090HepG2AKAP1
LRRC16AENSG00000079691.15163.33390106.645500.614902.583601.83990HepG2AKAP8L
LRRC16AENSG00000079691.15132.66420266.77740-1.007907.808706.74960HepG2AUH
LRRC16AENSG00000079691.15106.38830263.33830-1.307606.308305.44580HepG2BOP1
LRRC16AENSG00000079691.15333.32130173.023900.945807.636006.44380HepG2CALR
LRRC16AENSG00000079691.15169.4216084.312801.006704.476503.50500HepG2CIRBP
LRRC16AENSG00000079691.15194.87750106.132600.876605.250004.38690HepG2CKAP4
LRRC16AENSG00000079691.15233.11300118.706000.973504.113203.30160HepG2DDX21
LRRC16AENSG00000079691.15425.99220102.735902.0518015.0326013.68820HepG2DDX3X
LRRC16AENSG00000079691.15356.44950181.870200.970707.223806.04290HepG2DDX55
LRRC16AENSG00000079691.15424.39370274.544900.628302.603601.65710HepG2DDX59
LRRC16AENSG00000079691.1567.00540183.89230-1.456509.250407.53190HepG2DDX5
LRRC16AENSG00000079691.1573.23920154.81040-1.079805.289503.96330HepG2DHX30
LRRC16AENSG00000079691.1556.68970101.52650-0.840702.071301.47230HepG2DKC1
LRRC16AENSG00000079691.15277.9685084.838401.7120014.1636012.89070HepG2EIF2S1
LRRC16AENSG00000079691.15197.06430125.885000.646502.133201.33090HepG2EIF3D
LRRC16AENSG00000079691.1548.3460093.74670-0.955402.746302.10950HepG2EIF4A3
LRRC16AENSG00000079691.15133.71860208.17500-0.638603.064502.19180HepG2EIF4G1
LRRC16AENSG00000079691.15101.20540199.41260-0.978504.978003.90640HepG2EIF4G2
LRRC16AENSG00000079691.15156.77710103.728400.595802.207101.46140HepG2EWSR1
LRRC16AENSG00000079691.15261.90310175.911400.574102.333101.62220HepG2FIP1L1
LRRC16AENSG00000079691.15406.49260242.160100.747202.443101.49390HepG2FTO
LRRC16AENSG00000079691.15342.87630181.773500.915405.441703.91300HepG2FUS
LRRC16AENSG00000079691.15146.3749094.615900.629401.941701.35820HepG2FXR1
LRRC16AENSG00000079691.15166.8360087.754700.926804.010003.21700HepG2G3BP1
LRRC16AENSG00000079691.15126.6304072.092300.812602.499201.43930HepG2GRSF1
LRRC16AENSG00000079691.15323.93790193.913000.740203.813602.74300HepG2HNRNPA2B1
LRRC16AENSG00000079691.15131.59190230.98240-0.811705.097804.16230HepG2HNRNPF
LRRC16AENSG00000079691.1588.36670227.45330-1.3640010.384409.06790HepG2IGF2BP1
LRRC16AENSG00000079691.15219.23310312.63940-0.512002.088201.37440HepG2LARP4
LRRC16AENSG00000079691.15152.3684095.174000.678802.074801.52330HepG2MATR3
LRRC16AENSG00000079691.15222.89930131.734100.758702.266601.31340HepG2METAP2
LRRC16AENSG00000079691.15259.52800142.435000.865505.518404.41080HepG2MSI2
LRRC16AENSG00000079691.15267.6702097.412001.4582010.630509.42880HepG2NCBP2
LRRC16AENSG00000079691.15135.18890209.20770-0.630002.924602.14060HepG2NOL12
LRRC16AENSG00000079691.15321.52060166.868800.946104.979003.48990HepG2NONO
LRRC16AENSG00000079691.1546.05050231.91260-2.3323011.4421010.01320HepG2NSUN2
LRRC16AENSG00000079691.1528.4044071.16850-1.325102.963502.04430HepG2PABPC1
LRRC16AENSG00000079691.15188.1772086.733901.117305.860804.82340HepG2PABPC4
LRRC16AENSG00000079691.15243.75380177.237300.459602.192301.43000HepG2PARN
LRRC16AENSG00000079691.15297.0580076.384501.9593024.2152022.71860HepG2PCBP1
LRRC16AENSG00000079691.15157.91970225.11250-0.511502.599301.84820HepG2PRPF4
LRRC16AENSG00000079691.15209.53020140.443400.577102.171201.45310HepG2PRPF8
LRRC16AENSG00000079691.15310.00010156.156300.989204.206902.01120HepG2PSIP1
LRRC16AENSG00000079691.15423.3500077.714402.4455042.8429041.23440HepG2PTBP1
LRRC16AENSG00000079691.15135.73630199.71730-0.557202.100701.57110HepG2PUF60
LRRC16AENSG00000079691.15357.09410212.020700.752002.621402.04070HepG2PUM1
LRRC16AENSG00000079691.15356.77980211.858400.751805.914404.94700HepG2PUM2
LRRC16AENSG00000079691.15292.05020108.081801.4340015.9242014.66050HepG2PUS1
LRRC16AENSG00000079691.15147.9186084.187200.813003.010202.36320HepG2QKI
LRRC16AENSG00000079691.1577.21410166.03030-1.104503.797802.97630HepG2RAVER1
LRRC16AENSG00000079691.15362.90640255.997800.503403.197702.65100HepG2RBM22
LRRC16AENSG00000079691.15282.0166076.397501.8841018.9768017.31180HepG2RBM25
LRRC16AENSG00000079691.15224.1310086.496701.373507.728106.90490HepG2NELFE
LRRC16AENSG00000079691.15189.2565080.545401.232407.415606.47950HepG2RECQL
LRRC16AENSG00000079691.15135.45600248.80090-0.877205.082104.19410HepG2RPLP0
LRRC16AENSG00000079691.1599.28500163.12860-0.716402.385401.50650HepG2RPS10
LRRC16AENSG00000079691.15280.19810122.514201.193409.085308.04630HepG2RPS19
LRRC16AENSG00000079691.15250.88310152.180900.721103.534402.63170HepG2RPS2
LRRC16AENSG00000079691.15267.59150155.342200.784504.273102.92360HepG2RPS5
LRRC16AENSG00000079691.15225.73400122.926500.876704.386303.21320HepG2SERBP1
LRRC16AENSG00000079691.15134.86990258.92790-0.941004.042903.20530HepG2SF3B1
LRRC16AENSG00000079691.15279.0447080.928001.7857018.0423016.73440HepG2SF3B4
LRRC16AENSG00000079691.15120.07950191.52240-0.673503.173502.42990HepG2SLBP
LRRC16AENSG00000079691.15258.63210185.958000.475802.553501.93110HepG2SMN1
LRRC16AENSG00000079691.1592.52660169.39450-0.872403.689002.57080HepG2SMNDC1
LRRC16AENSG00000079691.15192.13500288.09570-0.584402.061501.39140HepG2SNRNP70
LRRC16AENSG00000079691.15307.5507084.464301.8643020.4836019.44730HepG2SRSF1
LRRC16AENSG00000079691.15159.92460226.92700-0.504802.358801.71230HepG2SRSF7
LRRC16AENSG00000079691.1595.99940251.05600-1.3869012.7630011.82070HepG2SSB
LRRC16AENSG00000079691.15184.00210116.142200.663702.765101.48220HepG2SSRP1
LRRC16AENSG00000079691.15186.9845075.900201.300608.206807.32470HepG2TAF15
LRRC16AENSG00000079691.15238.80730114.080401.065704.241602.93770HepG2TBRG4
LRRC16AENSG00000079691.15145.4062069.762701.059505.082903.96080HepG2TIA1
LRRC16AENSG00000079691.15272.28220166.743500.707402.977401.45130HepG2TRA2A
LRRC16AENSG00000079691.15212.78270150.517100.499401.983001.44140HepG2U2AF1
LRRC16AENSG00000079691.1539.58600107.00490-1.434602.768602.00850HepG2UCHL5
LRRC16AENSG00000079691.1551.89220165.93500-1.677003.107702.04300HepG2UPF2
LRRC16AENSG00000079691.15258.08040157.175800.715304.569703.26290HepG2UTP18
LRRC16AENSG00000079691.15282.06340163.300600.788403.315501.91780HepG2XRCC5
LRRC16AENSG00000079691.15286.14950182.608800.647902.898001.81460HepG2XRCC6
LRRC16AENSG00000079691.1574.57200178.26310-1.257302.195801.54380HepG2XRN2
LRRC16AENSG00000079691.15116.45460222.16050-0.931806.396805.44490HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRRC16A is not available on ENCORE database.






No RBPs affect the alternative splcing events of LRRC16A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LRRC16A is not avaliable on ENCORE database.