PREPL

General Information

Gene Name : PREPL
Gene ID : ENSG00000138078.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PREPL)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PREPL	ENSG00000138078.15	19.90	18.15	19.02	ENCSR000AEF
HepG2	PREPL	ENSG00000138078.15	14.55	29.88	22.21	ENCSR985KAT
K562	PREPL	ENSG00000138078.15	23.49	28.50	25.99	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PREPL is not avaliable on ENCORE database.

Proteins bound to RNA

PREPL RNA is bound by 16 proteins.

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eCLIP assay for PREPL is not avaliable on ENCORE database.

16 proteins are bound to PREPL RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	44570942	44571091	-	CDS,intron-Distal,intron-Proximal	5.06898	14.71257	HepG2	BCLAF1
chr2	44573407	44573531	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.49777	12.81576	K562	ZNF622
chr2	44556078	44556228	-	CDS,intron-Distal	3.49990	11.42728	K562	ZNF622
chr2	44547104	44547176	-	3'-UTR,intron-Distal	3.16248	10.94658	K562	FAM120A
chr2	44547183	44547259	-	3'-UTR,intron-Distal	3.69155	10.79751	K562	FAM120A
chr2	44553812	44553898	-	CDS,intron-Distal,intron-Proximal	4.11151	9.97647	HepG2	PRPF8
chr2	44547841	44547928	-	3'-UTR,intron-Distal,intron-Proximal	3.91909	9.72135	K562	FAM120A
chr2	44549818	44549979	-	CDS,intron-Distal,intron-Proximal	3.63001	9.53772	K562	UCHL5
chr2	44569594	44569700	-	CDS,intron-Distal,intron-Proximal	4.29369	9.26247	K562	BUD13
chr2	44546872	44546926	-	3'-UTR,intron-Distal	3.47469	9.01762	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 44 entries

eCLIP assay for PREPL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PREPL is not available on ENCORE database.
104 RBPs can affect the levels of PREPL.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PREPL is not available on ENCORE database.

104 RBPs can affect the gene expression of PREPL :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PREPL	ENSG00000138078.11	628.91860	3085.30510	-2.29450	94.44390	90.54260	K562	SRSF1
PREPL	ENSG00000138078.11	1605.48240	3730.09580	-1.21620	29.64320	27.92620	K562	AQR
PREPL	ENSG00000138078.11	2687.77030	1376.32660	0.96550	22.86990	21.03870	HepG2	RBM25
PREPL	ENSG00000138078.11	1498.99700	2796.28950	-0.89950	21.33970	19.13220	K562	CPSF6
PREPL	ENSG00000138078.11	747.59810	1714.51660	-1.19750	20.16110	18.22860	HepG2	NOL12
PREPL	ENSG00000138078.11	1791.80070	3147.30370	-0.81270	18.21100	16.58110	K562	PTBP1
PREPL	ENSG00000138078.11	1626.54130	3018.38430	-0.89200	17.37420	15.06960	K562	RBM22
PREPL	ENSG00000138078.11	1885.21880	1044.05300	0.85240	14.71630	13.29540	HepG2	DDX21
PREPL	ENSG00000138078.11	2139.17460	1367.75810	0.64510	13.40760	12.31070	HepG2	TAF15
PREPL	ENSG00000138078.11	2473.46620	4092.07300	-0.72630	14.65250	11.89180	K562	APOBEC3C
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 131 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PREPL is not available on ENCORE database.

26 RBPs can affect the splicing of PREPL :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PREPL	ENSG00000138078.11	chr2	-	44548965	44549039	44544749	44548584	44549869	44549993	-0.18500	0.00000	excluded	K562	AKAP8L
SE	PREPL	ENSG00000138078.11	chr2	-	44586635	44587177	44573406	44573529	44588518	44588633	-0.17400	0.00000	excluded	K562	AKAP8L
SE	PREPL	ENSG00000138078.11	chr2	-	44586635	44587177	44573406	44573529	44588518	44588633	-0.15300	0.00006	excluded	K562	PUS1
SE	PREPL	ENSG00000138078.11	chr2	-	44548965	44549039	44544749	44548584	44549869	44549993	-0.27500	0.00000	excluded	K562	PUS1
SE	PREPL	ENSG00000138078.11	chr2	-	44586635	44586889	44573406	44573529	44588518	44588945	-0.27100	0.00648	excluded	HepG2	UPF1
SE	PREPL	ENSG00000138078.11	chr2	-	44548965	44549039	44544749	44548584	44549869	44549993	-0.09600	0.00000	excluded	K562	UTP18
SE	PREPL	ENSG00000138078.11	chr2	-	44548965	44549039	44544749	44548584	44549869	44549993	-0.23200	0.00000	excluded	K562	U2AF2
SE	PREPL	ENSG00000138078.11	chr2	-	44586635	44587177	44573406	44573529	44588518	44588633	-0.19800	0.00018	excluded	K562	U2AF2
SE	PREPL	ENSG00000138078.11	chr2	-	44548965	44549039	44544749	44548584	44549869	44549993	-0.20500	0.00000	excluded	K562	RBM15
SE	PREPL	ENSG00000138078.11	chr2	-	44586635	44587177	44573406	44573529	44588518	44588633	-0.15900	0.00002	excluded	K562	RBM15

Showing 1 to 10 of 36 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PREPL

General Information

Functions

Localization

Domains (AlphaFold: PREPL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PREPL is not avaliable on ENCORE database.

16 proteins are bound to PREPL RNA:

eCLIP assay for PREPL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PREPL is not available on ENCORE database.

104 RBPs can affect the gene expression of PREPL :

The Knockdown/knockout RNA-Seq assay for PREPL is not available on ENCORE database.

26 RBPs can affect the splicing of PREPL :

The Knockdown/knockout RNA-Seq assay for PREPL is not avaliable on ENCORE database.