The Knockdown/knockout RNA-Seq assay for EP400 is not available on ENCORE database.
70 RBPs can affect the gene expression of EP400 :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
EP400 | ENSG00000183495.9 | 587.13570 | 1344.79690 | -1.19560 | 16.28340 | 15.10280 | HepG2 | AKAP1 | |
EP400 | ENSG00000183495.9 | 1800.10400 | 2669.98950 | -0.56880 | 12.96670 | 11.67570 | HepG2 | AUH | |
EP400 | ENSG00000183495.9 | 2122.75530 | 2685.24320 | -0.33910 | 3.11240 | 2.48180 | HepG2 | BOP1 | |
EP400 | ENSG00000183495.9 | 1350.78230 | 1057.11490 | 0.35360 | 2.38630 | 1.66260 | HepG2 | CIRBP | |
EP400 | ENSG00000183495.9 | 1002.06130 | 1288.10100 | -0.36230 | 2.37580 | 1.79110 | HepG2 | DDX3X | |
EP400 | ENSG00000183495.9 | 1573.85000 | 1063.70220 | 0.56510 | 5.31290 | 4.50800 | HepG2 | EIF2S1 | |
EP400 | ENSG00000183495.9 | 1967.96620 | 1144.64890 | 0.78170 | 7.02120 | 5.95360 | HepG2 | EIF4B | |
EP400 | ENSG00000183495.9 | 1329.09750 | 1723.32380 | -0.37470 | 5.34520 | 4.24430 | HepG2 | EIF4G1 | |
EP400 | ENSG00000183495.9 | 3461.14960 | 3065.69630 | 0.17490 | 1.91720 | 1.39730 | HepG2 | ETF1 | |
EP400 | ENSG00000183495.9 | 980.75960 | 1223.51870 | -0.31910 | 2.53180 | 1.43380 | HepG2 | FASTKD2 | |
EP400 | ENSG00000183495.9 | 737.03630 | 1069.53460 | -0.53720 | 4.38900 | 2.81290 | HepG2 | FKBP4 | |
EP400 | ENSG00000183495.9 | 1429.95170 | 976.60750 | 0.55000 | 5.51560 | 4.41620 | HepG2 | FUBP3 | |
EP400 | ENSG00000183495.9 | 2010.42420 | 1186.30330 | 0.76090 | 9.65840 | 8.43600 | HepG2 | FXR1 | |
EP400 | ENSG00000183495.9 | 1806.63210 | 1168.33990 | 0.62870 | 6.90840 | 5.48710 | HepG2 | G3BP2 | |
EP400 | ENSG00000183495.9 | 2056.41540 | 2794.42110 | -0.44240 | 3.71150 | 2.97930 | HepG2 | GPKOW | |
EP400 | ENSG00000183495.9 | 1344.11470 | 1605.35950 | -0.25620 | 2.68550 | 1.76180 | HepG2 | HNRNPA2B1 | |
EP400 | ENSG00000183495.9 | 1514.25670 | 1237.66140 | 0.29090 | 2.12840 | 1.51100 | HepG2 | HNRNPC | |
EP400 | ENSG00000183495.9 | 1607.25760 | 1114.59380 | 0.52800 | 5.38740 | 4.43670 | HepG2 | HNRNPK | |
EP400 | ENSG00000183495.9 | 2132.78440 | 2666.77230 | -0.32240 | 2.50340 | 1.90030 | HepG2 | HNRNPLL | |
EP400 | ENSG00000183495.9 | 1744.02580 | 1118.32570 | 0.64100 | 6.84970 | 5.83250 | HepG2 | IGF2BP2 | |
EP400 | ENSG00000183495.9 | 1798.52310 | 1049.79090 | 0.77660 | 3.11700 | 2.06980 | HepG2 | IGF2BP3 | |
EP400 | ENSG00000183495.9 | 1613.41290 | 1186.71910 | 0.44300 | 3.46240 | 2.72700 | HepG2 | MAGOH | |
EP400 | ENSG00000183495.9 | 2545.95260 | 1193.29840 | 1.09320 | 17.02990 | 15.56960 | HepG2 | MATR3 | |
EP400 | ENSG00000183495.9 | 1841.66460 | 1221.35630 | 0.59240 | 5.64360 | 4.75360 | HepG2 | NCBP2 | |
EP400 | ENSG00000183495.9 | 1552.38020 | 1087.46330 | 0.51340 | 4.44270 | 3.54060 | HepG2 | PABPC4 | |
EP400 | ENSG00000183495.9 | 1812.44310 | 1134.47380 | 0.67580 | 9.27780 | 8.27250 | HepG2 | PCBP1 | |
EP400 | ENSG00000183495.9 | 1123.53110 | 904.09260 | 0.31340 | 2.70790 | 1.48960 | HepG2 | PKM | |
EP400 | ENSG00000183495.9 | 1312.65490 | 1096.60130 | 0.25930 | 2.34410 | 1.66060 | HepG2 | PPIL4 | |
EP400 | ENSG00000183495.9 | 1654.06880 | 1154.38450 | 0.51880 | 8.96540 | 8.09350 | HepG2 | PTBP1 | |
EP400 | ENSG00000183495.9 | 1278.60990 | 1653.46440 | -0.37090 | 1.89280 | 1.38620 | HepG2 | PUF60 | |
EP400 | ENSG00000183495.9 | 2460.89860 | 1755.22360 | 0.48740 | 13.45140 | 12.35120 | HepG2 | PUM1 | |
EP400 | ENSG00000183495.9 | 2300.12420 | 1753.94260 | 0.39100 | 4.90400 | 4.02500 | HepG2 | PUM2 | |
EP400 | ENSG00000183495.9 | 1799.89250 | 1250.19500 | 0.52570 | 7.96000 | 6.98450 | HepG2 | QKI | |
EP400 | ENSG00000183495.9 | 1937.02760 | 2562.31500 | -0.40360 | 6.51440 | 5.80090 | HepG2 | RBM22 | |
EP400 | ENSG00000183495.9 | 1595.25760 | 1134.64440 | 0.49140 | 5.82450 | 4.87840 | HepG2 | RBM25 | |
EP400 | ENSG00000183495.9 | 2018.51090 | 1284.70670 | 0.65180 | 14.86200 | 13.79550 | HepG2 | NELFE | |
EP400 | ENSG00000183495.9 | 1845.93520 | 1196.55230 | 0.62540 | 13.81480 | 12.60010 | HepG2 | RECQL | |
EP400 | ENSG00000183495.9 | 1454.06360 | 2032.48460 | -0.48320 | 5.67270 | 4.74540 | HepG2 | RPLP0 | |
EP400 | ENSG00000183495.9 | 1336.10040 | 1063.79950 | 0.32870 | 2.82920 | 2.20840 | HepG2 | RPS19 | |
EP400 | ENSG00000183495.9 | 1380.15040 | 1094.91730 | 0.33390 | 4.52230 | 3.73240 | HepG2 | SAFB2 | |
EP400 | ENSG00000183495.9 | 1999.47090 | 1201.83640 | 0.73430 | 18.87720 | 17.54740 | HepG2 | SF3B4 | |
EP400 | ENSG00000183495.9 | 1900.53520 | 1585.41070 | 0.26140 | 3.73150 | 2.93700 | HepG2 | SLBP | |
EP400 | ENSG00000183495.9 | 1955.56800 | 2936.97020 | -0.58670 | 3.95980 | 3.01670 | HepG2 | SNRNP70 | |
EP400 | ENSG00000183495.9 | 2614.20500 | 2893.97010 | -0.14670 | 1.75850 | 1.33120 | HepG2 | SRFBP1 | |
EP400 | ENSG00000183495.9 | 1873.11280 | 1254.46800 | 0.57830 | 12.67670 | 11.82450 | HepG2 | SRSF1 | |
EP400 | ENSG00000183495.9 | 2022.76600 | 1632.55300 | 0.30910 | 4.28130 | 3.53260 | HepG2 | SRSF5 | |
EP400 | ENSG00000183495.9 | 1314.38780 | 1020.58600 | 0.36490 | 4.97270 | 4.27250 | HepG2 | SRSF9 | |
EP400 | ENSG00000183495.9 | 2209.00650 | 2512.52820 | -0.18570 | 2.24690 | 1.77390 | HepG2 | SSB | |
EP400 | ENSG00000183495.9 | 2463.09190 | 1856.66440 | 0.40770 | 8.59960 | 7.60380 | HepG2 | SUCLG1 | |
EP400 | ENSG00000183495.9 | 911.62560 | 1279.15210 | -0.48870 | 3.74220 | 2.97250 | HepG2 | SUPV3L1 | |
EP400 | ENSG00000183495.9 | 1602.80710 | 1127.59520 | 0.50730 | 7.92520 | 7.05540 | HepG2 | TAF15 | |
EP400 | ENSG00000183495.9 | 1356.66280 | 1036.07400 | 0.38880 | 3.86970 | 2.88940 | HepG2 | TIA1 | |
EP400 | ENSG00000183495.9 | 2595.51400 | 2183.67790 | 0.24920 | 1.88670 | 1.35670 | HepG2 | U2AF1 | |
EP400 | ENSG00000183495.9 | 1431.13940 | 2064.96560 | -0.52900 | 13.09740 | 11.81460 | HepG2 | ZC3H8 | |
EP400 | ENSG00000183495.9 | 3117.29710 | 4176.36040 | -0.42200 | 4.61930 | 3.89610 | K562 | AQR | |
EP400 | ENSG00000183495.9 | 2682.37360 | 2066.37780 | 0.37630 | 3.29360 | 2.12140 | K562 | CCAR1 | |
EP400 | ENSG00000183495.9 | 5153.53360 | 6227.87830 | -0.27320 | 3.07650 | 1.82360 | K562 | CCDC124 | |
EP400 | ENSG00000183495.9 | 2806.37950 | 3323.31930 | -0.24390 | 2.30370 | 1.58140 | K562 | CPSF6 | |
EP400 | ENSG00000183495.9 | 2237.89540 | 2790.79370 | -0.31850 | 2.87800 | 2.04070 | K562 | EIF4A3 | |
EP400 | ENSG00000183495.9 | 2997.49540 | 2513.22450 | 0.25410 | 2.77960 | 1.62250 | K562 | EIF4B | |
EP400 | ENSG00000183495.9 | 2738.83260 | 3600.59120 | -0.39470 | 3.82360 | 2.81600 | K562 | FIP1L1 | |
EP400 | ENSG00000183495.9 | 2805.05720 | 4410.76550 | -0.65300 | 12.14750 | 10.54240 | K562 | GRSF1 | |
EP400 | ENSG00000183495.9 | 1979.90550 | 2961.44480 | -0.58090 | 6.13460 | 4.67320 | K562 | HNRNPM | |
EP400 | ENSG00000183495.9 | 2996.58930 | 4881.76750 | -0.70410 | 11.81200 | 10.19580 | K562 | HSPD1 | |
EP400 | ENSG00000183495.9 | 3310.95200 | 2435.52120 | 0.44290 | 3.46410 | 2.26890 | K562 | IGF2BP2 | |
EP400 | ENSG00000183495.9 | 3022.98960 | 2477.02400 | 0.28730 | 2.44570 | 1.34540 | K562 | IGF2BP3 | |
EP400 | ENSG00000183495.9 | 3099.88510 | 2501.74890 | 0.30920 | 3.31210 | 1.82920 | K562 | PCBP1 | |
EP400 | ENSG00000183495.9 | 2556.82580 | 4087.24930 | -0.67680 | 10.47630 | 8.58900 | K562 | PPIG | |
EP400 | ENSG00000183495.9 | 1519.88320 | 2227.37450 | -0.55140 | 6.33890 | 5.20400 | K562 | PRPF8 | |
EP400 | ENSG00000183495.9 | 5109.33850 | 6431.37940 | -0.33200 | 3.07580 | 2.21660 | K562 | PUF60 | |
EP400 | ENSG00000183495.9 | 5912.19470 | 6702.59650 | -0.18100 | 2.15770 | 1.30870 | K562 | PUM2 | |
EP400 | ENSG00000183495.9 | 1646.08050 | 2268.64920 | -0.46280 | 4.03070 | 3.04210 | K562 | RPS19 | |
EP400 | ENSG00000183495.9 | 1614.51370 | 2277.19950 | -0.49620 | 3.53830 | 2.01830 | K562 | RRP9 | |
EP400 | ENSG00000183495.9 | 3789.37510 | 5143.53790 | -0.44080 | 9.28030 | 7.85200 | K562 | SF3A3 | |
EP400 | ENSG00000183495.9 | 2892.96120 | 2379.51700 | 0.28180 | 2.71690 | 1.90770 | K562 | TIA1 | |
EP400 | ENSG00000183495.9 | 2882.05860 | 2335.34100 | 0.30340 | 2.55080 | 1.50990 | K562 | TRA2A | |
EP400 | ENSG00000183495.9 | 2324.01860 | 1820.57420 | 0.35210 | 2.40900 | 1.39920 | K562 | U2AF1 | |
EP400 | ENSG00000183495.9 | 4978.73230 | 5526.98430 | -0.15070 | 1.99360 | 1.37710 | K562 | UPF1 | |
EP400 | ENSG00000183495.9 | 4286.29680 | 4917.92770 | -0.19830 | 3.11020 | 2.21400 | K562 | WDR43 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for EP400 is not available on ENCORE database.
19 RBPs can affect the splicing of EP400 :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132466033 | 132466141 | | | 132464241 | 132464338 | 132466637 | 132467023 | 0.48200 | 0.00142 | 0.02773 | included | K562 | SRSF1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.27400 | 0.00061 | 0.01396 | excluded | K562 | SF3B4 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132529215 | 132529260 | -0.35900 | 0.00000 | 0.00010 | excluded | HepG2 | U2AF1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.30700 | 0.00000 | 0.00000 | excluded | K562 | AKAP8L | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132448076 | 132448187 | | | 132445129 | 132446499 | 132464241 | 132464329 | 0.77900 | 0.00000 | 0.00155 | included | HepG2 | TRA2A | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.25800 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | 0.19000 | 0.00000 | 0.00030 | included | K562 | FXR1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.32900 | 0.00000 | 0.00000 | excluded | K562 | PUS1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.34700 | 0.00000 | 0.00001 | excluded | K562 | U2AF1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132478103 | 132478257 | | | 132476717 | 132476775 | 132479411 | 132479501 | 0.06100 | 0.00046 | 0.06355 | included | K562 | HNRNPM | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.09700 | 0.00001 | 0.00300 | excluded | K562 | HNRNPUL1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.24200 | 0.00000 | 0.00001 | excluded | K562 | UTP18 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.39400 | 0.00000 | 0.00002 | excluded | K562 | U2AF2 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132466033 | 132466141 | | | 132464241 | 132464338 | 132466637 | 132467023 | 0.53900 | 0.00116 | 0.04231 | included | K562 | TARDBP | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132479411 | 132479501 | | | 132476717 | 132476775 | 132489621 | 132489729 | -0.24700 | 0.00009 | 0.00561 | excluded | K562 | TARDBP | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132548332 | 132548533 | | | 132547010 | 132547246 | 132549212 | 132549431 | 0.07000 | 0.00046 | 0.02087 | included | K562 | HNRNPU | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132466033 | 132466141 | | | 132464241 | 132464338 | 132466637 | 132467023 | -0.30300 | 0.00011 | 0.00648 | excluded | K562 | HNRNPU | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.28100 | 0.00000 | 0.00000 | excluded | K562 | RBM15 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.32600 | 0.00000 | 0.00000 | excluded | K562 | AGGF1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132466033 | 132466141 | | | 132464241 | 132464338 | 132466637 | 132467023 | 0.48600 | 0.00147 | 0.05411 | included | K562 | PTBP1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132528189 | 132528273 | | | 132527848 | 132528007 | 132528721 | 132528856 | -0.08700 | 0.00004 | 0.01335 | excluded | K562 | NPM1 | |
SE | EP400 | ENSG00000183495.9 | chr12 | + | 132466033 | 132466141 | | | 132464241 | 132464338 | 132466637 | 132467023 | 0.48300 | 0.00000 | 0.00014 | included | K562 | HNRNPC | |
A3SS | EP400 | ENSG00000183495.9 | chr12 | + | 132474462 | 132474649 | | | 132474508 | 132474649 | 132472249 | 132472435 | 0.17300 | 0.00063 | 0.02612 | longer | K562 | U2AF2 | |
A3SS | EP400 | ENSG00000183495.9 | chr12 | + | 132546632 | 132546868 | | | 132546654 | 132546868 | 132539643 | 132539753 | 0.14700 | 0.01488 | 0.07429 | longer | K562 | AQR | |
A3SS | EP400 | ENSG00000183495.9 | chr12 | + | 132474462 | 132474649 | | | 132474508 | 132474649 | 132472249 | 132472435 | 0.05400 | 0.00214 | 0.07458 | longer | HepG2 | U2AF1 | |
A3SS | EP400 | ENSG00000183495.9 | chr12 | + | 132527837 | 132528007 | | | 132527848 | 132528007 | 132522497 | 132522641 | 0.11300 | 0.00229 | 0.08411 | longer | K562 | U2AF1 | |
A5SS | EP400 | ENSG00000183495.9 | chr12 | + | 132560986 | 132561178 | | | 132560986 | 132561138 | 132561945 | 132565005 | 0.18500 | 0.00072 | 0.01406 | longer | K562 | AQR | |
MXE | EP400 | ENSG00000183495.9 | chr12 | + | 132527848 | 132528007 | 132528721 | 132528856 | 132522497 | 132522641 | 132529215 | 132529260 | -0.17200 | 0.00220 | 0.04940 | 2included | K562 | TARDBP | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for EP400 is not avaliable on ENCORE database.