CBFB

General Information

Gene Name       : CBFB
Gene ID             : ENSG00000067955.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CBFB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CBFBENSG00000067955.1335.4445.1840.31ENCSR000AEF
HepG2CBFBENSG00000067955.1346.4553.2749.86ENCSR985KAT
K562CBFBENSG00000067955.1346.1646.8246.49ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CBFB is not avaliable on ENCORE database.



Proteins bound to RNA
  • CBFB RNA is bound by 16 proteins.  







eCLIP assay for CBFB is not avaliable on ENCORE database.





16 proteins are bound to CBFB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr166713419167134273+3'-UTR4.543625.29045K562IGF2BP1
chr166713462667134701+3'-UTR4.8578428.32354K562PUM2
chr166713314567133201+3'-UTR3.443244.48983K562TIA1
chr166713308967133249+3'-UTR3.6753110.38726HepG2FUBP3
chr166713262867132710+3'-UTR,CDS3.111266.02234K562UCHL5
chr166713347767133544+3'-UTR4.165264.20872K562IGF2BP1
chr166713420367134257+3'-UTR4.1188212.92981K562PUM2
chr166706304167063108+5'-UTR,intron-Proximal3.020314.46344HepG2DDX3X
chr166706304967063154+5'-UTR,intron-Distal,intron-Proximal3.517635.08552K562GEMIN5
chr166706319267063334+5'-UTR,CDS,intron-Distal3.4208817.22813HepG2DDX3X
chr166711611467116219+CDS,intron-Distal,intron-Proximal4.007525.28199HepG2GRWD1
chr166706332567063391+CDS,intron-Distal,intron-Proximal3.486488.34074HepG2PPIG
chr166711652067116652+intron-Distal4.143944.07352K562KHSRP
chr166710678767106908+intron-Distal4.428626.03523HepG2ILF3
chr166710370867103770+intron-Distal4.136053.85494HepG2HLTF
chr166711632867116385+intron-Distal,intron-Proximal3.091644.96160K562KHSRP
chr166707294567073033+intron-Distal3.670305.32884K562KHSRP
chr166708818867088318+intron-Distal4.623054.66899HepG2HNRNPM
chr166707408467074140+intron-Distal3.7066610.98856HepG2U2AF2
chr166707345667073536+intron-Distal3.305264.08064K562KHSRP
chr166708988367089995+intron-Distal4.031627.32988HepG2HNRNPM
chr166711866767118737+intron-Distal3.675197.94948K562TARDBP
chr166710668567106752+intron-Distal4.4369412.45419HepG2HNRNPC
chr166707408367074135+intron-Distal4.106684.08501K562U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CBFB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CBFB is not available on ENCORE database.

  • 122 RBPs can affect the levels of CBFB.  








The Knockdown/knockout RNA-Seq assay for CBFB is not available on ENCORE database.





122 RBPs can affect the gene expression of CBFB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CBFBENSG00000067955.91059.75340770.519100.459703.551002.34450HepG2AATF
CBFBENSG00000067955.91767.043601093.411400.6924015.3067014.12090HepG2ACO1
CBFBENSG00000067955.92344.884001481.633900.662206.599405.81720HepG2AKAP1
CBFBENSG00000067955.9936.83030703.590500.413002.652701.63580HepG2AKAP8
CBFBENSG00000067955.9794.160901098.74090-0.468303.174002.35890HepG2AKAP8L
CBFBENSG00000067955.91648.042801225.950900.426803.421202.54960HepG2ASCC1
CBFBENSG00000067955.9685.129901128.33090-0.719704.660803.51850HepG2BCLAF1
CBFBENSG00000067955.91911.935001159.457800.721505.138504.09210HepG2CNOT7
CBFBENSG00000067955.92853.820301701.640200.7459021.1359019.69470HepG2CELF1
CBFBENSG00000067955.91250.877401026.577500.285002.369701.30110HepG2DDX1
CBFBENSG00000067955.9590.48490850.49490-0.526404.786503.92130HepG2DDX21
CBFBENSG00000067955.92301.986001419.343200.697608.309307.27480HepG2DDX3X
CBFBENSG00000067955.9738.48040955.00700-0.371002.559501.58160HepG2DDX5
CBFBENSG00000067955.91587.176601219.127400.380502.451901.86770HepG2DDX6
CBFBENSG00000067955.9806.285701046.15820-0.375702.635001.97230HepG2DKC1
CBFBENSG00000067955.9734.243501006.65510-0.455203.406502.63130HepG2DNAJC21
CBFBENSG00000067955.9577.77940997.58880-0.787907.901706.87090HepG2DNAJC2
CBFBENSG00000067955.9525.80220708.77130-0.430802.753701.64790HepG2EFTUD2
CBFBENSG00000067955.91055.86310782.916300.431402.513401.46430HepG2AGO1
CBFBENSG00000067955.9419.849301172.09360-1.4811025.7305024.05450HepG2EIF2S1
CBFBENSG00000067955.91120.42290690.154200.699007.317905.91050HepG2EIF3D
CBFBENSG00000067955.9697.779301295.35780-0.8925010.053108.85270HepG2EIF4A3
CBFBENSG00000067955.92108.169401261.104700.741206.542205.51640HepG2EIF4B
CBFBENSG00000067955.92428.631102041.683100.250303.192002.55370HepG2ETF1
CBFBENSG00000067955.91730.765401069.463300.694406.714105.56890HepG2FIP1L1
CBFBENSG00000067955.9759.34960562.093200.433903.232202.38700HepG2FUBP3
CBFBENSG00000067955.9608.448301196.01640-0.975007.756806.71980HepG2GPKOW
CBFBENSG00000067955.9341.768701016.29720-1.5722019.3708017.91550HepG2HNRNPA1
CBFBENSG00000067955.9557.631101130.38390-1.0194010.884209.58650HepG2HNRNPC
CBFBENSG00000067955.9731.660501123.66450-0.619005.092904.15800HepG2HNRNPF
CBFBENSG00000067955.91095.041401666.75130-0.6061015.2752013.80340HepG2HNRNPL
CBFBENSG00000067955.9805.572301141.37130-0.502703.010502.35800HepG2HNRNPLL
CBFBENSG00000067955.91116.42540766.359100.542703.850102.39680HepG2HSPD1
CBFBENSG00000067955.9566.128001106.49810-0.9668017.0795015.45510HepG2IGF2BP1
CBFBENSG00000067955.9526.988201232.33890-1.2256019.7309018.11410HepG2IGF2BP2
CBFBENSG00000067955.9727.217201147.03040-0.657405.789204.76340HepG2ILF2
CBFBENSG00000067955.91045.047901314.59040-0.331001.873201.34890HepG2MATR3
CBFBENSG00000067955.91254.26380865.523600.535105.821304.69070HepG2MSI2
CBFBENSG00000067955.9721.535601163.82900-0.689704.206102.99700HepG2MTPAP
CBFBENSG00000067955.9471.30370726.79060-0.624906.233704.42350HepG2NAA15
CBFBENSG00000067955.9660.581701011.97040-0.615404.063003.16120HepG2NSUN2
CBFBENSG00000067955.9772.139201146.79850-0.570709.386608.37690HepG2PCBP1
CBFBENSG00000067955.9734.662001001.56060-0.447102.298701.61990HepG2PPIL4
CBFBENSG00000067955.91645.594101166.888600.495808.847407.98100HepG2PTBP1
CBFBENSG00000067955.92358.418201838.519000.359207.471606.59460HepG2PUM1
CBFBENSG00000067955.9817.957401263.81550-0.627709.377408.32650HepG2QKI
CBFBENSG00000067955.91005.770801243.68320-0.306302.892202.01830HepG2RBM15
CBFBENSG00000067955.92134.723701706.494800.322904.150803.54930HepG2RBM22
CBFBENSG00000067955.91741.163501146.976300.602108.428507.30130HepG2RBM25
CBFBENSG00000067955.91559.871601298.653000.264302.695102.15940HepG2NELFE
CBFBENSG00000067955.9738.574501210.32110-0.712608.528107.42870HepG2RPLP0
CBFBENSG00000067955.9702.215501176.94740-0.745106.891005.66400HepG2RPS2
CBFBENSG00000067955.9868.173001163.61890-0.422602.369001.62530HepG2RPS3A
CBFBENSG00000067955.91436.31130974.539500.559505.332304.27360HepG2RRP9
CBFBENSG00000067955.9701.775501000.04000-0.511003.987003.23780HepG2SAFB2
CBFBENSG00000067955.91636.758801091.075800.585003.384102.63590HepG2SF3A3
CBFBENSG00000067955.91106.992701660.63370-0.5851013.8053012.44490HepG2SLBP
CBFBENSG00000067955.92176.040101927.468100.174902.054501.60280HepG2SRFBP1
CBFBENSG00000067955.91620.043001268.098200.353304.713004.13760HepG2SRSF1
CBFBENSG00000067955.9729.393601103.93070-0.597909.430508.27730HepG2SRSF7
CBFBENSG00000067955.91473.734101031.651700.514409.372808.46220HepG2SRSF9
CBFBENSG00000067955.91251.984601673.57730-0.418703.901403.31540HepG2SSB
CBFBENSG00000067955.9416.15010714.30290-0.779406.480604.68380HepG2STAU1
CBFBENSG00000067955.91380.31100964.790200.516602.705201.51610HepG2SUB1
CBFBENSG00000067955.9317.19810772.97950-1.2850012.358709.50470HepG2SUGP2
CBFBENSG00000067955.9519.27290722.12710-0.475803.920502.81330HepG2SUPT6H
CBFBENSG00000067955.91712.474601139.771900.5872010.096409.13300HepG2TAF15
CBFBENSG00000067955.9641.365101091.34220-0.766905.032504.39910HepG2TIAL1
CBFBENSG00000067955.9719.989001036.62600-0.525802.971101.44990HepG2TRA2A
CBFBENSG00000067955.91547.60810914.839200.758409.380808.21190HepG2U2AF1
CBFBENSG00000067955.9815.49050994.57090-0.286402.589401.56970HepG2UTP18
CBFBENSG00000067955.91094.10800934.196200.227901.834201.32460HepG2UTP3
CBFBENSG00000067955.91394.972801015.202900.458402.606301.38750HepG2XRCC5
CBFBENSG00000067955.9695.183801251.00600-0.847606.068805.00880HepG2XRN2
CBFBENSG00000067955.91377.756501064.193700.372505.995605.27110HepG2ZNF622
CBFBENSG00000067955.91277.69120918.634200.475904.726503.13670K562AARS
CBFBENSG00000067955.91395.478701797.61020-0.365303.030601.74240K562ABCF1
CBFBENSG00000067955.9276.12500535.16780-0.954704.328502.15920K562ADAR
CBFBENSG00000067955.92099.764201506.345500.479109.064308.11350K562AGGF1
CBFBENSG00000067955.91225.011901567.40720-0.355602.901302.23240K562AKAP8L
CBFBENSG00000067955.9937.895301308.29180-0.480207.487705.88400K562BCLAF1
CBFBENSG00000067955.9911.324401252.13800-0.458403.478501.84950K562BUD13
CBFBENSG00000067955.9329.67250523.99880-0.668503.277602.10800K562CCAR1
CBFBENSG00000067955.9919.912601635.27250-0.830004.787103.33860K562CNOT7
CBFBENSG00000067955.9723.944001007.07620-0.476202.654901.88560K562CPSF6
CBFBENSG00000067955.9724.45450992.53430-0.454204.619803.20100K562CSTF2
CBFBENSG00000067955.92289.822503127.35770-0.449706.536005.05220K562CELF1
CBFBENSG00000067955.9799.304101089.13030-0.446404.925003.28190K562DDX21
CBFBENSG00000067955.9331.34070586.55240-0.823904.832102.97150K562DHX30
CBFBENSG00000067955.92173.237801686.727500.365504.952403.72890K562DKC1
CBFBENSG00000067955.9766.433601144.59230-0.578603.905902.35110K562EEF2
CBFBENSG00000067955.9675.615401106.00060-0.711107.172305.64310K562EFTUD2
CBFBENSG00000067955.9822.089201304.21610-0.6658012.6846010.05560K562EIF2S1
CBFBENSG00000067955.92224.324701593.942800.480705.263204.31690K562EIF2S2
CBFBENSG00000067955.91684.231301184.359900.507903.515902.33710K562EIF3D
CBFBENSG00000067955.91067.912201341.12540-0.328703.338902.46960K562EIF3G
CBFBENSG00000067955.9772.484101240.49570-0.683308.710707.25370K562EIF4A3
CBFBENSG00000067955.9871.310001117.13730-0.358503.558302.22240K562EIF4B
CBFBENSG00000067955.9764.708701082.82870-0.501805.605703.63830K562EWSR1
CBFBENSG00000067955.9553.59140863.37240-0.641207.364605.25760K562EXOSC5
CBFBENSG00000067955.9945.675001292.21400-0.450404.115503.06760K562FIP1L1
CBFBENSG00000067955.91649.764801290.064000.354704.471303.72700K562FXR1
CBFBENSG00000067955.9855.241701337.40680-0.645007.852006.00970K562GLRX3
CBFBENSG00000067955.9571.35480961.55460-0.751005.574604.45130K562GPKOW
CBFBENSG00000067955.91572.127702124.34590-0.434302.294701.60300K562GRSF1
CBFBENSG00000067955.9607.56500873.68860-0.524104.632802.04120K562GRWD1
CBFBENSG00000067955.9830.704901466.90670-0.820405.432602.93510K562HNRNPA0
CBFBENSG00000067955.9780.717501397.14370-0.8396014.8680012.69560K562HNRNPA1
CBFBENSG00000067955.9390.227601005.42860-1.3654017.4349016.01760K562HNRNPC
CBFBENSG00000067955.9620.41620897.73520-0.533104.903003.32520K562HNRNPF
CBFBENSG00000067955.91155.624401770.07090-0.615108.841506.87240K562HNRNPL
CBFBENSG00000067955.91246.275201547.18130-0.312003.241902.27850K562HNRNPU
CBFBENSG00000067955.92197.298401751.944700.326702.655701.87560K562HSPD1
CBFBENSG00000067955.9729.855901089.53470-0.578004.546502.22070K562IGF2BP1
CBFBENSG00000067955.9634.88500973.28920-0.616406.488804.24300K562LARP7
CBFBENSG00000067955.91262.908901640.43340-0.377302.882201.93920K562MATR3
CBFBENSG00000067955.92516.056801863.486900.433105.399804.04250K562MBNL1
CBFBENSG00000067955.9692.40030938.56570-0.438902.525801.69240K562METAP2
CBFBENSG00000067955.91060.425501406.13660-0.407104.032203.07150K562MTPAP
CBFBENSG00000067955.9869.106601562.18810-0.8460011.8748010.47830K562NSUN2
CBFBENSG00000067955.9732.84180989.76570-0.433602.866601.41120K562NUSAP1
CBFBENSG00000067955.91009.803201571.01290-0.637603.196701.85360K562PABPC1
CBFBENSG00000067955.9766.394901144.62960-0.578702.351501.45370K562PABPN1
CBFBENSG00000067955.91249.761901606.30110-0.362102.986901.58210K562PCBP1
CBFBENSG00000067955.9717.10070981.52300-0.452803.836902.11360K562PHF6
CBFBENSG00000067955.91146.887801466.94220-0.355102.763101.94280K562PPIG
CBFBENSG00000067955.91344.339001076.261600.320802.306501.61970K562PRPF8
CBFBENSG00000067955.9548.58600901.44040-0.716507.481005.85040K562PSIP1
CBFBENSG00000067955.92516.186301596.852300.6559011.7488010.43680K562PTBP1
CBFBENSG00000067955.93425.862902775.298000.303702.969902.12320K562PUF60
CBFBENSG00000067955.93652.225502951.777200.307103.716202.46420K562PUM1
CBFBENSG00000067955.92195.512001554.535000.498005.164904.45150K562PUS1
CBFBENSG00000067955.91388.853802014.08250-0.536203.250201.50390K562RBM17
CBFBENSG00000067955.91057.167901320.85670-0.321303.892002.02720K562RPS10
CBFBENSG00000067955.9876.206701489.42790-0.765402.880601.32800K562SBDS
CBFBENSG00000067955.9587.41230775.98540-0.401702.754101.31370K562SDAD1
CBFBENSG00000067955.91257.500201541.71300-0.294002.336001.58110K562SF3A3
CBFBENSG00000067955.9377.89700577.24750-0.611203.192201.82850K562SLBP
CBFBENSG00000067955.91033.417001529.66790-0.565803.559001.55800K562SMN1
CBFBENSG00000067955.9598.27550779.52950-0.381802.526301.55770K562SRFBP1
CBFBENSG00000067955.9800.076601074.56000-0.425503.205701.42850K562SRP68
CBFBENSG00000067955.92007.945401565.361300.359102.864602.14760K562SRSF1
CBFBENSG00000067955.9673.50280971.84780-0.529006.627404.80540K562SRSF7
CBFBENSG00000067955.9902.872301383.38340-0.6156010.441407.92870K562SSB
CBFBENSG00000067955.9919.094401550.68580-0.754609.026506.70610K562STAU1
CBFBENSG00000067955.9757.448301474.84670-0.961304.005301.63710K562SUGP2
CBFBENSG00000067955.9679.298701042.27210-0.617605.109403.69060K562SUPV3L1
CBFBENSG00000067955.91101.01760844.906600.381903.652802.71050K562SYNCRIP
CBFBENSG00000067955.91153.234301584.43380-0.458303.032402.29140K562TARDBP
CBFBENSG00000067955.9440.98420867.05340-0.9754011.317109.31250K562TIAL1
CBFBENSG00000067955.9576.25160920.96190-0.676407.374605.66560K562TRIM56
CBFBENSG00000067955.91171.828601511.53680-0.367302.690901.33540K562TRIP6
CBFBENSG00000067955.91203.919001523.90610-0.340004.310202.72580K562TROVE2
CBFBENSG00000067955.91041.570901417.33770-0.444404.663503.51330K562WDR3
CBFBENSG00000067955.91092.140501474.00520-0.432604.542703.47710K562WDR43
CBFBENSG00000067955.9819.228401122.99770-0.455003.439702.04180K562XRN2
CBFBENSG00000067955.91911.927702900.55220-0.601303.261102.31470K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CBFB is not available on ENCORE database.





7 RBPs can affect the splicing of CBFB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECBFBENSG00000067955.9chr16+671005846710070167070541670706586711611567116242-0.097000.000000.00000excludedK562AQR
SECBFBENSG00000067955.9chr16+671005846710070167070541670706586711611567116242-0.104000.000100.01280excludedK562SUPV3L1
SECBFBENSG00000067955.9chr16+671005846710070167070541670706586711611567116242-0.087000.000080.01450excludedHepG2PCBP2
SECBFBENSG00000067955.9chr16+671005846710070167070541670706586711611567116242-0.087000.000000.00004excludedHepG2SF3A3
SECBFBENSG00000067955.9chr16+6711352667113685671005846710070167116115671162000.078000.000000.00000includedK562HNRNPC
A3SSCBFBENSG00000067955.9chr16+6711609467116242671161156711624267100584671007010.087000.000000.00000longerK562AQR
MXECBFBENSG00000067955.9chr16+67100584671007016711611567116211670705416707065867132612671349250.105000.002120.039331includedHepG2FTO
MXECBFBENSG00000067955.9chr16+67070453670706586711352667113685670636296706371667116115671162000.625000.016290.093501includedK562AQR
MXECBFBENSG00000067955.9chr16+6710058467100701671161156711624267070541670706586713261267134961-0.094000.014310.084332includedK562AQR
MXECBFBENSG00000067955.9chr16+67100584671007016711611867116242670705416707065867132612671349610.115000.003210.064651includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CBFB is not avaliable on ENCORE database.