HIATL1

General Information

Gene Name       : HIATL1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIATL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIATL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIATL1 RNA is bound by 20 proteins.  







eCLIP assay for HIATL1 is not avaliable on ENCORE database.





20 proteins are bound to HIATL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr99722149297221531+3'-UTR,CDS4.023883.31110K562TIA1
chr99722188397221977+3'-UTR4.515048.96979K562IGF2BP1
chr99722189997221957+3'-UTR3.612534.01547K562TIA1
chr99722260897222693+3'-UTR3.283864.76300K562IGF2BP1
chr99722202797222090+3'-UTR4.667176.42531K562IGF2BP1
chr99722309497223136+3'-UTR5.3320110.91695K562PABPC4
chr99722142197221477+3'-UTR,CDS,intron-Proximal3.837063.02097K562U2AF1
chr99722213197222215+3'-UTR3.568268.14633K562TIA1
chr99722142197221478+3'-UTR,CDS,intron-Proximal4.723707.56928K562U2AF2
chr99722141297221473+3'-UTR,CDS,intron-Proximal3.069463.05068HepG2U2AF2
chr99722238397222451+3'-UTR3.346003.34573K562IGF2BP2
chr99722304997223080+3'-UTR4.889753.95647K562PABPC4
chr99722271397222765+3'-UTR3.965987.44045K562IGF2BP1
chr99722296997223057+3'-UTR4.232566.46185HepG2FUBP3
chr99722297097223016+3'-UTR3.920217.15108K562ZC3H11A
chr99722297897223012+3'-UTR4.530783.54514K562TIA1
chr99722238097222453+3'-UTR4.926468.11065K562IGF2BP1
chr99722296297223028+3'-UTR4.0876250.33757K562PUM2
chr99722144297221463+3'-UTR,CDS,intron-Proximal4.134623.02250K562YBX3
chr99713694597137004+5'-UTR3.941486.48775HepG2DDX3X
chr99713686497136911+5'-UTR4.060994.26442K562DDX3X
chr99720920997209220+CDS,intron-Proximal3.454784.02462K562TIA1
chr99720919897209255+CDS,intron-Proximal4.343295.89229K562EFTUD2
chr99721846897218546+CDS,intron-Distal,intron-Proximal4.446646.11702K562SF3B4
chr99721619497216248+CDS,intron-Proximal4.820454.40745K562SF3B4
chr99721375397213807+CDS3.465994.77467K562SND1
chr99721370597213769+CDS,intron-Proximal5.009705.90023K562SF3B4
chr99721864897218700+intron-Distal,intron-Proximal4.042723.44423K562BUD13
chr99722079397220882+intron-Distal,intron-Proximal3.992463.92684K562KHSRP
chr99721915397219292+intron-Distal5.346746.23953HepG2PCBP2
chr99720426197204356+intron-Distal4.564864.39969K562TARDBP
chr99720704997207198+intron-Distal,intron-Proximal4.363373.79000HepG2U2AF2
chr99720770397207780+intron-Distal3.334714.10408K562KHSRP
chr99721197997212143+intron-Distal3.145857.61954K562HNRNPL
chr99721389197213974+intron-Distal,intron-Proximal5.190864.24111K562EFTUD2
chr99721864297218698+intron-Distal,intron-Proximal3.864585.35561K562RBM22
chr99721864597218704+intron-Distal,intron-Proximal4.969065.02942K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIATL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIATL1 is not available on ENCORE database.

  • 74 RBPs can affect the levels of HIATL1.  








The Knockdown/knockout RNA-Seq assay for HIATL1 is not available on ENCORE database.





74 RBPs can affect the gene expression of HIATL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIATL1ENSG00000148110.111074.54090904.233700.248902.392701.82040HepG2ACO1
HIATL1ENSG00000148110.111596.058601253.178800.348802.081301.61270HepG2AKAP1
HIATL1ENSG00000148110.11767.836901036.92070-0.433403.040402.21810HepG2ASCC1
HIATL1ENSG00000148110.11530.62320768.98950-0.535303.767402.73240HepG2BCLAF1
HIATL1ENSG00000148110.11763.034201247.96520-0.709804.500903.75890HepG2BOP1
HIATL1ENSG00000148110.11722.30980903.97710-0.323703.490802.75930HepG2CKAP4
HIATL1ENSG00000148110.11819.622201145.74360-0.483302.494801.83640HepG2CPSF6
HIATL1ENSG00000148110.11690.532301227.24740-0.8296021.2681019.56830HepG2DAZAP1
HIATL1ENSG00000148110.11510.50020814.15860-0.673404.780203.15070HepG2DDX27
HIATL1ENSG00000148110.11761.24330995.26900-0.386702.805601.78700HepG2DDX5
HIATL1ENSG00000148110.11570.49210816.02800-0.516404.558103.31370HepG2DHX30
HIATL1ENSG00000148110.11687.89070865.09110-0.330703.014502.31130HepG2DKC1
HIATL1ENSG00000148110.11341.83150838.59860-1.2947035.5623033.47380HepG2DNAJC2
HIATL1ENSG00000148110.11681.49600991.36850-0.540704.296403.56640HepG2EIF2S1
HIATL1ENSG00000148110.11746.694901095.62840-0.553204.096103.32210HepG2EIF4A3
HIATL1ENSG00000148110.11449.59020671.32840-0.578404.011701.95750HepG2EXOSC9
HIATL1ENSG00000148110.111409.658001121.985000.329202.115401.43810HepG2FIP1L1
HIATL1ENSG00000148110.11785.095401025.40020-0.385202.357301.74020HepG2G3BP1
HIATL1ENSG00000148110.11836.998301088.49040-0.379002.524701.67560HepG2G3BP2
HIATL1ENSG00000148110.11634.033301298.90870-1.034707.685306.65220HepG2GPKOW
HIATL1ENSG00000148110.11556.92630790.68690-0.505602.686701.59040HepG2GRSF1
HIATL1ENSG00000148110.11664.13500950.10610-0.516604.574903.69780HepG2HNRNPC
HIATL1ENSG00000148110.11841.283201138.66300-0.436705.529904.55870HepG2HNRNPF
HIATL1ENSG00000148110.11925.739801117.92480-0.272103.041702.33770HepG2HNRNPL
HIATL1ENSG00000148110.11779.31140943.82440-0.276302.455401.88260HepG2HNRNPU
HIATL1ENSG00000148110.11786.869201121.26350-0.510905.780604.77340HepG2IGF2BP1
HIATL1ENSG00000148110.11790.99490964.08500-0.285502.882402.13550HepG2ILF2
HIATL1ENSG00000148110.11673.09190826.54560-0.296302.893401.85690HepG2KIF1C
HIATL1ENSG00000148110.111315.34130908.302000.534106.488305.30020HepG2MSI2
HIATL1ENSG00000148110.11864.452001263.93150-0.548103.181302.13580HepG2MTPAP
HIATL1ENSG00000148110.11796.945601138.10190-0.514103.900203.15270HepG2NCBP2
HIATL1ENSG00000148110.11465.42030745.89030-0.680406.764004.51470HepG2NIP7
HIATL1ENSG00000148110.11729.225301099.02200-0.591802.913802.14590HepG2NSUN2
HIATL1ENSG00000148110.11550.854101013.64530-0.879809.959908.60860HepG2PABPC4
HIATL1ENSG00000148110.11523.16510908.33760-0.796005.911904.43900HepG2PCBP2
HIATL1ENSG00000148110.11698.97100841.81550-0.268302.027301.38770HepG2PPIL4
HIATL1ENSG00000148110.11627.00690864.95190-0.464105.413104.36590HepG2PRPF4
HIATL1ENSG00000148110.11915.670301161.67590-0.343302.699602.10970HepG2PUF60
HIATL1ENSG00000148110.11520.50690876.54340-0.751904.149203.29380HepG2RAVER1
HIATL1ENSG00000148110.11902.887901217.13840-0.430905.133804.48200HepG2RBM22
HIATL1ENSG00000148110.11722.49510937.66660-0.376102.839502.15740HepG2RBM25
HIATL1ENSG00000148110.11819.141801226.53670-0.582406.306705.33400HepG2RPLP0
HIATL1ENSG00000148110.11602.90560861.07560-0.514202.689501.75860HepG2RPS10
HIATL1ENSG00000148110.11627.08070857.37840-0.451302.457701.70240HepG2RPS3A
HIATL1ENSG00000148110.11654.83930936.46960-0.516104.216602.87560HepG2RPS5
HIATL1ENSG00000148110.11598.87360840.51590-0.489006.314005.40050HepG2SAFB2
HIATL1ENSG00000148110.11403.57830651.22390-0.690305.949004.58610HepG2SERBP1
HIATL1ENSG00000148110.111468.995101028.010600.514903.476702.71740HepG2SF3A3
HIATL1ENSG00000148110.11844.697801226.99000-0.538602.994302.26050HepG2SF3B1
HIATL1ENSG00000148110.11914.535201113.87400-0.284503.057402.32430HepG2SLBP
HIATL1ENSG00000148110.11812.984301118.67980-0.460506.042605.07670HepG2SRSF7
HIATL1ENSG00000148110.11875.434601193.63540-0.447306.257705.54400HepG2SSB
HIATL1ENSG00000148110.11515.33190757.82450-0.556404.995203.75110HepG2SUPT6H
HIATL1ENSG00000148110.11764.508201207.87300-0.659904.317303.43790HepG2TARDBP
HIATL1ENSG00000148110.11703.97050917.09240-0.381603.291402.75360HepG2TIAL1
HIATL1ENSG00000148110.11668.75100925.30060-0.468506.023405.24780HepG2TRIM56
HIATL1ENSG00000148110.111157.21440880.200700.394704.997604.23300HepG2UTP3
HIATL1ENSG00000148110.11535.44990852.69950-0.671305.942604.89070HepG2XRN2
HIATL1ENSG00000148110.112127.909502518.49150-0.243102.681701.78370K562ATP5C1
HIATL1ENSG00000148110.111206.787001443.99010-0.258902.559101.63830K562BCLAF1
HIATL1ENSG00000148110.111417.908301681.85920-0.246302.508901.35880K562DDX21
HIATL1ENSG00000148110.11952.166401266.39370-0.411405.263603.43100K562DDX27
HIATL1ENSG00000148110.111685.111602414.93780-0.5191011.082109.87570K562DDX47
HIATL1ENSG00000148110.112132.302402583.19360-0.276703.478002.48010K562DKC1
HIATL1ENSG00000148110.112648.363301716.451400.6256014.7022013.24280K562EIF2S2
HIATL1ENSG00000148110.11939.838401350.55050-0.523107.432606.13710K562EIF3G
HIATL1ENSG00000148110.112411.032602822.12210-0.227102.223601.37740K562EIF4G2
HIATL1ENSG00000148110.111509.039801869.64860-0.309102.484301.68200K562FIP1L1
HIATL1ENSG00000148110.111557.002601264.910800.299603.242902.59620K562FXR1
HIATL1ENSG00000148110.111574.563702287.49560-0.538807.026005.81380K562GRSF1
HIATL1ENSG00000148110.11952.587601540.50160-0.693505.281604.48220K562HNRNPC
HIATL1ENSG00000148110.111400.098601825.67380-0.382904.875903.67810K562HNRNPU
HIATL1ENSG00000148110.113185.626802534.913000.329502.815002.01300K562HSPD1
HIATL1ENSG00000148110.111248.032301567.99230-0.329302.644401.79210K562METAP2
HIATL1ENSG00000148110.112430.346103008.12770-0.307702.424101.36950K562MSI2
HIATL1ENSG00000148110.11980.956801680.42080-0.7766020.6775018.76340K562MTPAP
HIATL1ENSG00000148110.111612.108901867.08360-0.211802.880602.12100K562NSUN2
HIATL1ENSG00000148110.111235.922102165.60930-0.809202.275601.39500K562PABPN1
HIATL1ENSG00000148110.111409.838401749.57700-0.311502.017001.30770K562PCBP3
HIATL1ENSG00000148110.113983.858503275.029700.282603.325202.14970K562PUM1
HIATL1ENSG00000148110.111719.200901346.041000.352902.686501.88040K562SYNCRIP
HIATL1ENSG00000148110.111210.035401552.02510-0.359102.781602.07330K562TARDBP
HIATL1ENSG00000148110.111626.405902010.87200-0.306103.372401.96060K562TROVE2
HIATL1ENSG00000148110.111395.214201693.97290-0.279902.337001.53130K562WDR3
HIATL1ENSG00000148110.111441.184201761.54850-0.289604.058303.04720K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIATL1 is not available on ENCORE database.





19 RBPs can affect the splicing of HIATL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.188000.000010.01250excludedK562IGF2BP2
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.195000.000170.00475excludedK562SF3B4
SEHIATL1ENSG00000148110.11chr9+972185219721861997216239972163529722060397220746-0.175000.000370.01736excludedK562PRPF8
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.144000.000210.08351excludedK562TIA1
SEHIATL1ENSG00000148110.11chr9+972185219721861997216239972163529722060397220746-0.220000.001140.02293excludedHepG2U2AF1
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.152000.000080.02557excludedK562PCBP1
SEHIATL1ENSG00000148110.11chr9+972185219721861997216239972163529722060397220746-0.143000.005240.05508excludedHepG2U2AF2
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.240000.000000.00000excludedK562AQR
SEHIATL1ENSG00000148110.11chr9+972205739722074697218521972186199722144297223324-0.073000.011310.08950excludedK562AQR
SEHIATL1ENSG00000148110.11chr9+972185219721861997216311972163529722060397220746-0.170000.000000.00011excludedK562FXR1
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.196000.000040.00101excludedK562PUS1
SEHIATL1ENSG00000148110.11chr9+972185219721861997216239972163529722060397220746-0.293000.000000.00009excludedK562U2AF1
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.173000.000120.02557excludedK562RBM22
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.145000.001610.04877excludedK562UTP18
SEHIATL1ENSG00000148110.11chr9+9720326697203381972006829720081097207245972074640.133000.000240.00609includedK562U2AF2
SEHIATL1ENSG00000148110.11chr9+972185219721861997216239972163529722060397220746-0.287000.000000.00001excludedK562U2AF2
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.250000.000010.01665excludedK562TRA2A
SEHIATL1ENSG00000148110.11chr9+972072459720746497203266972033819720910497209218-0.077000.000060.00413excludedK562TARDBP
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.163000.000680.02054excludedK562AGGF1
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.132000.000910.04189excludedK562HNRNPK
SEHIATL1ENSG00000148110.11chr9+972072459720746497203266972033819720910497209218-0.105000.001320.05331excludedHepG2HNRNPU
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.192000.000080.00496excludedHepG2HNRNPC
SEHIATL1ENSG00000148110.11chr9+972032669720338197200682972008109720724597207464-0.439000.000000.00000excludedK562HNRNPC
A3SSHIATL1ENSG00000148110.11chr9+9720908097209218972091049720921897207245972074640.077000.000000.00000longerK562AQR
A3SSHIATL1ENSG00000148110.11chr9+9721371597213809972137379721380997209104972092180.085000.000010.00009longerK562AQR
A3SSHIATL1ENSG00000148110.11chr9+9721621797216352972162399721635297213737972138090.436000.000000.00000longerK562AQR
MXEHIATL1ENSG00000148110.11chr9+9720068297200810972072459720746497191470971915339720910497209218-0.170000.000620.054222includedK562HNRNPL
MXEHIATL1ENSG00000148110.11chr9+97200682972008109720326697203381971914709719153397207245972074640.220000.000000.000031includedK562AQR
MXEHIATL1ENSG00000148110.11chr9+97216217972163529722057397220746972137379721380997221442972218030.233000.000000.000001includedK562AQR
MXEHIATL1ENSG00000148110.11chr9+97218468972186199722049897220746972161779721635297221442972233240.067000.000170.001971includedK562AQR
MXEHIATL1ENSG00000148110.11chr9+9720326697203381972072459720746497200682972008109720910497209218-0.111000.002470.019902includedK562AQR
MXEHIATL1ENSG00000148110.11chr9+97203337972033819720724597207464972006829720081097209104972092180.061000.000950.026041includedK562TARDBP
MXEHIATL1ENSG00000148110.11chr9+97203337972033819720910497209218972006829720081097213737972138090.103000.002590.056351includedK562TARDBP
MXEHIATL1ENSG00000148110.11chr9+97207245972074649720910497209218972006829720081097213737972138090.190000.000100.004301includedK562TARDBP
MXEHIATL1ENSG00000148110.11chr9+9720326697203381972072459720746497200682972008109720910497209218-0.306000.000050.001982includedK562HNRNPC
MXEHIATL1ENSG00000148110.11chr9+97203266972033819720724597207464972006829720081097209104972092180.198000.002780.067911includedHepG2HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HIATL1 is not avaliable on ENCORE database.