TRIM37

General Information

Gene Name       : TRIM37
Gene ID             : ENSG00000108395.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM37)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM37ENSG00000108395.1313.3711.1512.26ENCSR000AEF
HepG2TRIM37ENSG00000108395.1316.9323.2820.11ENCSR985KAT
K562TRIM37ENSG00000108395.1313.2816.0314.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM37 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM37 RNA is bound by 11 proteins.  







eCLIP assay for TRIM37 is not avaliable on ENCORE database.





11 proteins are bound to TRIM37 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr175712657557126656-3'-UTR,CDS,intron-Distal3.430963.93645HepG2PPIG
chr175711916957119232-3'-UTR,CDS,intron-Distal,intron-Proximal3.073674.94718HepG2PPIG
chr175715303557153124-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.159486.10653K562SF3B4
chr175715704957157130-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.234654.21433K562PRPF8
chr175709465657094701-3'-UTR,CDS,intron-Distal,intron-Proximal4.094593.53690K562ZNF622
chr175712663157126711-3'-UTR,CDS,intron-Distal4.056564.31428K562YBX3
chr175712511257125215-3'-UTR,CDS,intron-Distal,intron-Proximal3.301706.65588K562AQR
chr175711917557119239-3'-UTR,CDS,intron-Distal3.411824.85828HepG2BCLAF1
chr175715711357157225-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.335379.10017HepG2BCLAF1
chr175712507357125148-3'-UTR,CDS,intron-Distal3.397406.09767K562UCHL5
chr175714163257141728-5'-UTR,CDS,intron-Distal,intron-Proximal3.752914.95247K562PRPF8
chr175713839157138449-5'-UTR,CDS,intron-Distal,intron-Proximal3.422593.27569HepG2BCLAF1
chr175718400157184109-5'-UTR,intron-Distal,intron-Proximal4.312796.83552HepG2DDX3X
chr175713425157134308-5'-UTR,CDS,intron-Distal3.113903.55800HepG2BCLAF1
chr175716863057168743-5'-UTR,CDS,intron-Distal,intron-Proximal4.249155.63851K562SF3B4
chr175716862557168710-5'-UTR,CDS,intron-Distal,intron-Proximal5.391224.68690HepG2PRPF8
chr175713417457134239-5'-UTR,CDS,intron-Distal,intron-Proximal4.176913.02181K562PRPF8
chr175716866357168714-5'-UTR,CDS,intron-Distal,intron-Proximal3.832013.00614K562U2AF2
chr175716566757165726-5'-UTR,CDS,intron-Distal4.644365.44793K562ZNF622
chr175713436757134441-5'-UTR,CDS,intron-Distal,intron-Proximal4.006434.22551K562SF3B4
chr175716164057161760-intron-Distal4.246654.76003K562KHSRP
chr175710377957103857-intron-Distal3.724583.45805K562KHSRP
chr175712646357126534-intron-Distal,intron-Proximal4.118604.49024K562AQR
chr175710609257106214-intron-Distal,intron-Proximal3.751803.42844K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM37 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM37 is not available on ENCORE database.

  • 75 RBPs can affect the levels of TRIM37.  








The Knockdown/knockout RNA-Seq assay for TRIM37 is not available on ENCORE database.





75 RBPs can affect the gene expression of TRIM37 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM37ENSG00000108395.91082.05850668.728800.694205.759405.02410HepG2AKAP1
TRIM37ENSG00000108395.9547.55710747.46750-0.449002.234401.39650HepG2BCCIP
TRIM37ENSG00000108395.9475.66980649.53260-0.449402.287201.47180HepG2BCLAF1
TRIM37ENSG00000108395.9801.025001129.51680-0.495804.620803.87090HepG2BOP1
TRIM37ENSG00000108395.91099.39050525.678501.0644015.0671013.42990HepG2CIRBP
TRIM37ENSG00000108395.9846.43950501.231200.755804.780703.76900HepG2CNOT7
TRIM37ENSG00000108395.9598.281801036.94350-0.793409.329308.13970HepG2CPSF6
TRIM37ENSG00000108395.9824.020201077.55800-0.387005.637404.63120HepG2DAZAP1
TRIM37ENSG00000108395.9778.28040610.691500.349702.232701.61610HepG2DDX21
TRIM37ENSG00000108395.91280.20220640.555100.9989013.2498011.97780HepG2DDX3X
TRIM37ENSG00000108395.9457.36100695.72110-0.605207.113606.12440HepG2DKC1
TRIM37ENSG00000108395.9457.58660670.08510-0.550307.113106.13610HepG2DNAJC2
TRIM37ENSG00000108395.9791.53940569.199200.475602.413801.77010HepG2EIF4B
TRIM37ENSG00000108395.9949.547601239.47080-0.384402.968102.34860HepG2ETF1
TRIM37ENSG00000108395.91199.35160897.355700.418402.674201.91680HepG2FIP1L1
TRIM37ENSG00000108395.9890.18210589.889500.593604.910604.00730HepG2FXR1
TRIM37ENSG00000108395.9697.056101175.41640-0.753807.608306.58050HepG2GPKOW
TRIM37ENSG00000108395.9491.76390759.19030-0.626505.689304.72220HepG2HNRNPC
TRIM37ENSG00000108395.9685.548701079.98380-0.6557011.063809.75530HepG2HNRNPF
TRIM37ENSG00000108395.9762.48780981.60980-0.364404.588603.73770HepG2HNRNPL
TRIM37ENSG00000108395.9644.449301121.72520-0.799609.360708.28000HepG2HNRNPLL
TRIM37ENSG00000108395.9665.916801063.47850-0.675408.992207.75620HepG2IGF2BP1
TRIM37ENSG00000108395.9822.10540556.135900.563804.386403.55310HepG2IGF2BP2
TRIM37ENSG00000108395.9988.45310522.003600.921003.486802.38160HepG2IGF2BP3
TRIM37ENSG00000108395.9547.43100664.78650-0.280202.293601.36330HepG2KIF1C
TRIM37ENSG00000108395.9840.68340590.096000.510503.613702.86420HepG2MAGOH
TRIM37ENSG00000108395.9894.13660726.492300.299402.190301.46520HepG2MSI2
TRIM37ENSG00000108395.9799.175201144.10080-0.517602.887001.89500HepG2MTPAP
TRIM37ENSG00000108395.9894.95030607.339300.559204.215003.43920HepG2NCBP2
TRIM37ENSG00000108395.9672.73060994.65270-0.564204.987803.99450HepG2NSUN2
TRIM37ENSG00000108395.9535.36320768.25400-0.521102.793901.74880HepG2PCBP2
TRIM37ENSG00000108395.9408.92120672.66030-0.718109.152307.85880HepG2PPIL4
TRIM37ENSG00000108395.9324.05530567.03010-0.807206.206605.04740HepG2PRPF8
TRIM37ENSG00000108395.9714.05640548.092500.381503.637003.02810HepG2PTBP1
TRIM37ENSG00000108395.9584.553601019.94100-0.8031011.1888010.09900HepG2PUF60
TRIM37ENSG00000108395.9899.154901081.90660-0.266902.124901.53340HepG2PUM2
TRIM37ENSG00000108395.9901.09280593.543200.602207.240206.30060HepG2QKI
TRIM37ENSG00000108395.9481.08790741.39590-0.623902.916602.19430HepG2RAVER1
TRIM37ENSG00000108395.91485.019901035.980900.519408.099607.32140HepG2RBM22
TRIM37ENSG00000108395.9722.00560538.699200.422403.289502.56030HepG2RBM25
TRIM37ENSG00000108395.91150.65940609.953100.9156019.3080018.13060HepG2NELFE
TRIM37ENSG00000108395.9764.31980568.126900.427904.295903.55050HepG2RECQL
TRIM37ENSG00000108395.9800.197901163.36650-0.539905.584104.66380HepG2RPLP0
TRIM37ENSG00000108395.9710.810001110.26340-0.643407.006605.92580HepG2SF3B1
TRIM37ENSG00000108395.9706.36760570.589100.307902.349401.79870HepG2SF3B4
TRIM37ENSG00000108395.9632.23020977.88330-0.6292011.244709.98750HepG2SLBP
TRIM37ENSG00000108395.9408.85490723.33850-0.823103.445101.66060HepG2SLTM
TRIM37ENSG00000108395.9688.135401235.37090-0.844206.577005.36340HepG2SNRNP70
TRIM37ENSG00000108395.91424.06320595.590301.2575040.3223038.97950HepG2SRSF1
TRIM37ENSG00000108395.9542.130901061.03900-0.9688021.6026020.00060HepG2SRSF7
TRIM37ENSG00000108395.9610.16030484.560500.332402.726502.17800HepG2SRSF9
TRIM37ENSG00000108395.91334.948501145.272200.221001.957201.41750HepG2SUCLG1
TRIM37ENSG00000108395.9985.67540535.391700.8804015.9340014.75300HepG2TAF15
TRIM37ENSG00000108395.9499.08270732.81810-0.554205.642104.97720HepG2TIAL1
TRIM37ENSG00000108395.9551.31960739.36890-0.423404.490503.80710HepG2TRIM56
TRIM37ENSG00000108395.9764.50970996.37460-0.382203.294702.33510HepG2TUFM
TRIM37ENSG00000108395.9513.34880720.18890-0.488402.841002.10730HepG2XRN2
TRIM37ENSG00000108395.91016.58700859.622800.241902.418701.89750HepG2ZNF622
TRIM37ENSG00000108395.91378.012101132.646300.282802.086501.51680K562AKAP8L
TRIM37ENSG00000108395.91490.972601188.424500.327103.610902.55510K562ATP5C1
TRIM37ENSG00000108395.91228.03400940.001400.385502.802201.92330K562BOP1
TRIM37ENSG00000108395.91375.95730999.462200.461105.012103.96170K562CPSF6
TRIM37ENSG00000108395.91021.19120805.489200.342202.825901.77300K562DDX3X
TRIM37ENSG00000108395.91948.966101503.719000.374105.743304.85550K562DDX47
TRIM37ENSG00000108395.91446.542401218.789000.247102.370701.56890K562DKC1
TRIM37ENSG00000108395.9660.39490841.54850-0.349702.369001.60770K562EIF4A3
TRIM37ENSG00000108395.92136.763001801.507000.246103.160002.15900K562EIF4G2
TRIM37ENSG00000108395.91142.98700862.011100.406902.807601.88660K562FTO
TRIM37ENSG00000108395.9661.99310820.25610-0.309301.935901.42520K562HNRNPC
TRIM37ENSG00000108395.9613.91430831.70450-0.438002.858201.37860K562LIN28B
TRIM37ENSG00000108395.91127.471901920.29380-0.7682010.790508.68240K562MSI2
TRIM37ENSG00000108395.92118.504601454.359100.542603.068101.76070K562PABPC1
TRIM37ENSG00000108395.9565.26610735.41650-0.379602.352101.52440K562PSIP1
TRIM37ENSG00000108395.92599.950102090.379400.314603.969802.67090K562PUM1
TRIM37ENSG00000108395.91409.386201123.252100.327302.166501.67390K562PUS1
TRIM37ENSG00000108395.91289.967301094.458400.237001.950601.43740K562RBM15
TRIM37ENSG00000108395.91440.102801211.371600.249402.315501.56380K562SF3A3
TRIM37ENSG00000108395.91330.32100934.702300.509105.947104.91910K562SRSF1
TRIM37ENSG00000108395.91728.821501298.099400.413303.198401.83510K562STAU1
TRIM37ENSG00000108395.9470.99600703.24260-0.578304.515903.18370K562UCHL5
TRIM37ENSG00000108395.91558.099001301.640000.259402.945102.20400K562UPF1
TRIM37ENSG00000108395.9890.668801113.76740-0.322502.534101.69350K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM37 is not available on ENCORE database.





10 RBPs can affect the splicing of TRIM37 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIM37ENSG00000108395.9chr17-5712103457121278571191735711925957125043571251800.119000.000010.00016includedK562AQR
SETRIM37ENSG00000108395.9chr17-5715401457154095571530075715307557157114571572380.174000.004270.04083includedK562AQR
SETRIM37ENSG00000108395.9chr17-570789585707907557076741570768205708968857089807-0.241000.000000.00001excludedK562AQR
SETRIM37ENSG00000108395.9chr17-571613625716145057158457571585805716565157165768-0.132000.000700.00901excludedK562AQR
SETRIM37ENSG00000108395.9chr17-571250435712518057119173571192595712653857126754-0.054000.009640.07887excludedK562AQR
SETRIM37ENSG00000108395.9chr17-571613625716145057158457571585805716565157165768-0.119000.000310.00645excludedK562PUS1
SETRIM37ENSG00000108395.9chr17-570946565709478557092970570931605710577557106084-0.216000.003380.07854excludedHepG2SF3A3
SETRIM37ENSG00000108395.9chr17-571613625716145057158457571585805716565157165768-0.171000.000050.00338excludedK562UTP18
SETRIM37ENSG00000108395.9chr17-5707895857079075570767415707682057089688570898070.206000.000030.04094includedK562TRA2A
SETRIM37ENSG00000108395.9chr17-571613625716145057158457571585805716565157165768-0.115000.001470.03659excludedK562RBM15
SETRIM37ENSG00000108395.9chr17-571613625716145057158457571585805716565157165768-0.092000.004880.09134excludedK562AGGF1
SETRIM37ENSG00000108395.9chr17-570789585707907557076741570768205708968857089807-0.267000.000290.01475excludedHepG2HNRNPC
SETRIM37ENSG00000108395.9chr17-571613625716145057158457571585805716565157165768-0.189000.000030.00101excludedK562HNRNPC
SETRIM37ENSG00000108395.9chr17-570946565709478557092970570931605710577557106084-0.146000.004160.06013excludedK562HNRNPC
A3SSTRIM37ENSG00000108395.9chr17-5707895857079102570789585707907557089688570898070.256000.000000.00002longerK562U2AF2
A3SSTRIM37ENSG00000108395.9chr17-5707895857079102570789585707907557089688570898070.289000.000000.00000longerHepG2U2AF2
A3SSTRIM37ENSG00000108395.9chr17-5714818357148369571481835714830857153007571530700.211000.000000.00000longerK562AQR
A3SSTRIM37ENSG00000108395.9chr17-5708968857089888570896885708980757092970570931600.051000.016510.08112longerK562AQR
A3SSTRIM37ENSG00000108395.9chr17-5707895857079151570789585707907557089688570898070.116000.001840.01194longerK562AQR
A3SSTRIM37ENSG00000108395.9chr17-5712504357125223571250435712518057126538571267540.202000.000000.00000longerK562AQR
MXETRIM37ENSG00000108395.9chr17-57092970570931605709465657094785570896885708980757105775571060840.403000.000120.040111includedHepG2EIF3H
MXETRIM37ENSG00000108395.9chr17-57078958570790755708968857089842570767415707682057092970570931600.220000.000000.000011includedK562AQR
MXETRIM37ENSG00000108395.9chr17-57078958570790755708968857089888570767415707682057092970570931600.224000.000000.000011includedK562AQR
MXETRIM37ENSG00000108395.9chr17-57141715571417665714818357148329571399275714000957153007571530750.106000.000980.009011includedK562AQR
MXETRIM37ENSG00000108395.9chr17-5709297057093160570946565709478557089688570898075710577557106084-0.144000.004380.032132includedK562AQR
MXETRIM37ENSG00000108395.9chr17-5708968857089807570929705709316057075568570768205709465657094785-0.252000.000100.001162includedK562AQR
MXETRIM37ENSG00000108395.9chr17-5708968857089836570929705709316057075560570768205709465657094785-0.258000.000020.000312includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIM37 is not avaliable on ENCORE database.