ZFC3H1

General Information

Gene Name       : ZFC3H1
Gene ID             : ENSG00000133858.15
Essential Gene : Yes

Functions

Localization(RBPImage: ZFC3H1)

Domains (AlphaFold: ZFC3H1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZFC3H1ENSG00000133858.1548.0546.1647.10ENCSR000AEF
HepG2ZFC3H1ENSG00000133858.1512.8522.8717.86ENCSR985KAT
K562ZFC3H1ENSG00000133858.1531.4050.4140.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
ZFC3H1ENCAB178HJEA301-455A1Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZFC3H1K562shRNABGKLV34-57,BGKLV34-58BGKLV34-1,BGKLV34-2NotSatisfiedENCODE3
ZFC3H1HepG2shRNABGHLV22-63,BGHLV22-64BGHLV22-1,BGHLV22-20.0,0.0NotSatisfiedENCODE3
ZFC3H1HepG2shRNABGHLV33-45,BGHLV33-46BGHLV33-1,BGHLV33-2NotSatisfiedENCODE3
ZFC3H1K562CRISPRBGKcLV11-117,BGKcLV11-118BGKcLV11-1,BGKcLV11-20.0,0.0NotSatisfiedENCODE4
ZFC3H1K562CRISPRBGKcLV11-119,BGKcLV11-120BGKcLV11-1,BGKcLV11-20.0,0.0NotSatisfiedENCODE4
ZFC3H1HepG2CRISPRBGHcLV12-89,BGHcLV12-90BGHcLV12-1,BGHcLV12-2band is too high,NotSatisfiedENCODE4
ZFC3H1HepG2CRISPRBGHcLV12-91,BGHcLV12-92BGHcLV12-1,BGHcLV12-2has difference ,band is too highNotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    ZFC3H1: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












  • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    ZFC3H1Product_ID: A301-455A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: ZFC3H1-human
    K562_bethyl_A301-455A_1_ZFC3H1.jpg<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using ZFC3H1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal CCDC131 Antibody (lanes under 'ZFC3H1').








    RNA Targets

    • eCLIP assay for ZFC3H1 is not avaliable on ENCORE database.



    Proteins bound to RNA

    • ZFC3H1 RNA is bound by 40 proteins.  







    eCLIP assay for ZFC3H1 is not avaliable on ENCORE database.





    40 proteins are bound to ZFC3H1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr127200481972004886-3'-UTR,CDS,intron-Distal,intron-Proximal4.9738420.05263K562U2AF2
    chr127200450972004540-3'-UTR,CDS,intron-Distal,intron-Proximal3.162935.40388HepG2U2AF2
    chr127200484272004885-3'-UTR,CDS,intron-Distal,intron-Proximal3.859424.89564K562GPKOW
    chr127200381872003898-3'-UTR,intron-Distal,intron-Proximal3.631958.51958K562PABPC4
    chr127200396772004021-3'-UTR,intron-Distal3.8211810.17809K562ZNF622
    chr127205042472050475-3'-UTR,intron-Distal3.251013.29213HepG2KHSRP
    chr127200499972005048-3'-UTR,intron-Distal,intron-Proximal3.844636.17334HepG2U2AF2
    chr127200430172004368-3'-UTR,CDS,intron-Distal3.662488.44353HepG2U2AF2
    chr127200451872004539-3'-UTR,CDS,intron-Distal,intron-Proximal4.068844.90655K562U2AF2
    chr127205054072050640-3'-UTR,intron-Distal,intron-Proximal3.356036.82127K562KHSRP
    chr127200494572004992-3'-UTR,intron-Distal,intron-Proximal4.006313.42844K562KHSRP
    chr127200482972004885-3'-UTR,CDS,intron-Distal,intron-Proximal4.174794.73575HepG2U2AF1
    chr127205028972050355-3'-UTR,CDS,intron-Distal4.117047.81467HepG2U2AF2
    chr127205056672050638-3'-UTR,intron-Distal,intron-Proximal3.512794.54121HepG2KHSRP
    chr127200381572003869-3'-UTR,intron-Distal,intron-Proximal3.9102112.20055K562TIA1
    chr127200483472004887-3'-UTR,CDS,intron-Distal,intron-Proximal4.3533421.00469HepG2U2AF2
    chr127200368172003743-3'-UTR,intron-Distal4.983694.79197K562ZC3H11A
    chr127205061072050697-3'-UTR,CDS,intron-Distal,intron-Proximal4.373847.56654HepG2PRPF8
    chr127200353872003633-3'-UTR,intron-Distal4.039993.61393K562CPSF6
    chr127200386972003896-3'-UTR,intron-Distal,intron-Proximal5.248039.01438K562TIA1
    chr127200382172003905-3'-UTR,intron-Distal,intron-Proximal3.3959215.28508HepG2U2AF2
    chr127200556372005598-3'-UTR,CDS,intron-Distal,intron-Proximal3.312676.91872HepG2BCLAF1
    chr127200527772005324-3'-UTR,intron-Distal,intron-Proximal4.215913.12843K562PRPF8
    chr127200433672004440-3'-UTR,CDS,intron-Distal,intron-Proximal3.382876.58352HepG2EFTUD2
    chr127200433372004453-3'-UTR,CDS,intron-Distal,intron-Proximal5.274518.70538HepG2TIAL1
    chr127200478772004839-3'-UTR,CDS,intron-Distal,intron-Proximal4.552628.01338K562AQR
    chr127200382372003874-3'-UTR,intron-Distal,intron-Proximal4.374723.34382K562APOBEC3C
    chr127205746672057589-5'-UTR,intron-Distal4.6183532.13178K562UCHL5
    chr127205736672057444-5'-UTR,CDS,intron-Distal3.297734.07060HepG2ZNF800
    chr127205741972057447-5'-UTR,intron-Distal4.490024.93465K562RBM15
    chr127205754672057596-5'-UTR,intron-Distal3.893936.67731HepG2PRPF4
    chr127205753172057586-5'-UTR,intron-Distal4.108674.11309HepG2SRSF1
    chr127205747472057531-5'-UTR,intron-Distal3.042193.07769HepG2SRSF1
    chr127205746272057531-5'-UTR,intron-Distal3.249457.34517HepG2NCBP2
    chr127205747272057574-5'-UTR,intron-Distal4.246044.07830K562SRSF1
    chr127205756072057579-5'-UTR,intron-Distal4.693853.48187K562RBM15
    chr127205738872057437-5'-UTR,CDS,intron-Distal4.689487.47028K562DDX24
    chr127205737672057453-5'-UTR,CDS,intron-Distal3.144587.93618K562UCHL5
    chr127205753972057598-5'-UTR,intron-Distal3.279627.71508HepG2NCBP2
    chr127205747972057546-5'-UTR,intron-Distal3.327347.27212HepG2GTF2F1
    chr127205746072057546-5'-UTR,intron-Distal4.9304115.45651HepG2PRPF4
    chr127205753172057601-5'-UTR,intron-Distal,intron-Proximal3.625889.99332HepG2HLTF
    chr127205734972057453-5'-UTR,CDS,intron-Distal3.789903.48567K562SLTM
    chr127205745472057539-5'-UTR,intron-Distal3.855526.82910K562GRWD1
    chr127205746172057542-5'-UTR,intron-Distal3.3979816.42270K562ZNF622
    chr127203796572038041-CDS,intron-Distal4.7135317.04031K562UCHL5
    chr127200895072009001-CDS,intron-Distal,intron-Proximal3.786586.35344K562PRPF8
    chr127202619972026292-CDS,intron-Distal4.4308511.37918K562UCHL5
    chr127202847472028564-CDS,intron-Distal,intron-Proximal4.053976.56585HepG2TRA2A
    chr127202794072028085-CDS,intron-Distal,intron-Proximal3.1210817.84548K562DDX24
    chr127205681972056948-CDS,intron-Distal3.544464.88610HepG2SRSF9
    chr127200714572007240-CDS,intron-Distal,intron-Proximal3.423515.00298K562U2AF2
    chr127201713872017166-CDS,intron-Distal,intron-Proximal3.322449.25770HepG2BCLAF1
    chr127202564472025725-CDS,intron-Distal,intron-Proximal3.435707.59237K562GPKOW
    chr127202006972020138-CDS,intron-Distal5.1056519.15489HepG2BCLAF1
    chr127204152872041573-CDS,intron-Distal,intron-Proximal4.3053212.72422K562ZNF622
    chr127203067572030734-CDS,intron-Distal3.8382910.31263K562ZNF622
    chr127201800372018042-CDS,intron-Distal4.0465511.60362HepG2BCLAF1
    chr127202449072024501-CDS,intron-Distal4.7765011.09109HepG2BCLAF1
    chr127203787372037955-CDS,intron-Distal,intron-Proximal3.588545.26921K562MTPAP
    chr127202596872026002-CDS,intron-Distal,intron-Proximal3.876013.82000HepG2GRWD1
    chr127202460272024619-CDS,intron-Distal,intron-Proximal5.0164012.14572HepG2BCLAF1
    chr127203066772030715-CDS,intron-Distal3.807328.13606K562UCHL5
    chr127203787272038024-CDS,intron-Distal,intron-Proximal3.0404712.75825K562BUD13
    chr127205683072056912-CDS,intron-Distal3.3459411.13035K562UCHL5
    chr127203622172036341-CDS,intron-Distal,intron-Proximal3.635474.93055K562ZNF800
    chr127205080272050864-CDS,intron-Distal3.020295.73053K562ZNF622
    chr127200836672008394-CDS,intron-Distal3.382377.93794HepG2BCLAF1
    chr127202604272026079-CDS,intron-Distal3.083533.80299HepG2GRWD1
    chr127202596672026024-CDS,intron-Distal,intron-Proximal5.2886615.86994HepG2BCLAF1
    chr127203227672032295-CDS,intron-Distal3.508713.91614K562BUD13
    chr127203878272038830-CDS,intron-Distal4.9503014.38113K562UCHL5
    chr127203622072036283-CDS,intron-Distal4.7616215.51821HepG2BCLAF1
    chr127203040572030434-CDS,intron-Distal3.063898.78789K562ZNF622
    chr127202848272028510-CDS,intron-Distal,intron-Proximal3.347416.00907HepG2PPIG
    chr127203799272038038-CDS,intron-Distal3.486245.21950K562DDX24
    chr127203028472030296-CDS,intron-Distal3.283825.40132HepG2BCLAF1
    chr127202666872026746-CDS,intron-Distal5.6817523.44893HepG2BCLAF1
    chr127203787472038055-CDS,intron-Distal,intron-Proximal4.036417.25055HepG2FXR2
    chr127201309872013138-CDS,intron-Distal4.249279.37631HepG2BCLAF1
    chr127200711672007140-CDS,intron-Distal,intron-Proximal3.503087.42278HepG2BCLAF1
    chr127200715672007216-CDS,intron-Distal,intron-Proximal3.837063.02097K562U2AF1
    chr127205684972056912-CDS,intron-Distal4.4844919.02394K562ZNF622
    chr127205691472056958-CDS,intron-Distal5.160146.52076HepG2RBM15
    chr127202439572024428-CDS,intron-Distal4.430569.37631HepG2BCLAF1
    chr127202848372028494-CDS,intron-Distal,intron-Proximal3.007034.80218K562UCHL5
    chr127202794572028056-CDS,intron-Distal6.3055036.49545HepG2BCLAF1
    chr127202677072026796-CDS,intron-Distal4.7483511.47391HepG2BCLAF1
    chr127202563972025654-CDS,intron-Distal,intron-Proximal3.861287.89209HepG2BCLAF1
    chr127205707372057138-CDS,intron-Distal4.272217.64390K562RBM15
    chr127203876672038821-CDS,intron-Distal3.442177.01182K562ZNF622
    chr127205684072056916-CDS,intron-Distal3.386923.68010HepG2GTF2F1
    chr127200894172009016-CDS,intron-Distal,intron-Proximal5.8377712.84241HepG2PRPF8
    chr127203789572038038-CDS,intron-Distal4.579297.25670HepG2TRA2A
    chr127202805172028085-CDS,intron-Distal,intron-Proximal3.360567.15565HepG2BUD13
    chr127203786972037965-CDS,intron-Distal,intron-Proximal4.7174523.16402K562UCHL5
    chr127203792372037953-CDS,intron-Distal4.476934.19050K562GPKOW
    chr127202805772028083-CDS,intron-Distal3.091503.21309HepG2GRWD1
    chr127200714572007243-CDS,intron-Distal,intron-Proximal3.1762213.32415HepG2U2AF2
    chr127201716672017237-CDS,intron-Distal3.2603912.12193HepG2BCLAF1
    chr127202795672028085-CDS,intron-Distal,intron-Proximal3.5494510.23365HepG2ZNF800
    chr127202468772024728-CDS,intron-Distal3.6563411.34372HepG2BCLAF1
    chr127202271072022766-CDS,intron-Distal4.2559913.23699HepG2BCLAF1
    chr127205683872056902-CDS,intron-Distal3.713363.05559HepG2DGCR8
    chr127202338872023415-CDS,intron-Distal,intron-Proximal5.9374613.58086HepG2BCLAF1
    chr127201788372017953-CDS,intron-Distal,intron-Proximal3.778054.53300K562LIN28B
    chr127202712272027176-CDS,intron-Distal4.2230414.24397HepG2BCLAF1
    chr127202590772025966-CDS,intron-Distal,intron-Proximal5.7502622.98596HepG2BCLAF1
    chr127200705872007143-CDS,intron-Distal,intron-Proximal4.969395.82778K562PRPF8
    chr127202591172025952-CDS,intron-Distal,intron-Proximal3.057413.39306HepG2GRWD1
    chr127202603572026091-CDS,intron-Distal3.185173.78791K562RBM15
    chr127202604672026078-CDS,intron-Distal3.991348.49795HepG2BCLAF1
    chr127203621572036249-CDS,intron-Distal,intron-Proximal3.172653.55660K562BUD13
    chr127203627572036339-CDS,intron-Distal3.902255.65991HepG2ZNF800
    chr127203882172038852-CDS,intron-Distal4.035989.36792K562ZNF622
    chr127201382272013866-CDS,intron-Distal,intron-Proximal4.332609.37631HepG2BCLAF1
    chr127202848372028512-CDS,intron-Distal,intron-Proximal3.446408.10579K562ZNF622
    chr127203788172037947-CDS,intron-Distal6.4899720.54619HepG2BCLAF1
    chr127202849272028550-CDS,intron-Distal3.446779.08026K562DDX24
    chr127201781472017889-CDS,intron-Distal,intron-Proximal3.397664.76426K562PRPF8
    chr127205681572056875-CDS,intron-Distal3.367823.13384HepG2EIF3H
    chr127202564972025720-CDS,intron-Distal,intron-Proximal3.487585.76243HepG2BUD13
    chr127205680672056955-CDS,intron-Distal3.192538.39176HepG2SRSF1
    chr127202277672022817-CDS,intron-Distal6.3918919.84715HepG2BCLAF1
    chr127201784772017922-CDS,intron-Distal,intron-Proximal3.905518.96944HepG2PRPF8
    chr127202666572026690-CDS,intron-Distal,intron-Proximal3.255786.92192K562UCHL5
    chr127202704472027063-CDS,intron-Distal4.641299.74753HepG2BCLAF1
    chr127202563372025702-CDS,intron-Distal,intron-Proximal3.9811412.58031K562BUD13
    chr127200877672008999-CDS,intron-Distal,intron-Proximal3.4150213.12361K562KHSRP
    chr127203081972030839-CDS,intron-Distal3.061407.60260K562ZNF622
    chr127202800872028050-CDS,intron-Distal3.9758410.31073K562ZNF622
    chr127205690772056972-CDS,intron-Distal3.419489.43964K562RBM15
    chr127202850872028556-CDS,intron-Distal3.218667.36807K562UCHL5
    chr127202805672028083-CDS,intron-Distal4.5391112.88094HepG2BCLAF1
    chr127203788272037976-CDS,intron-Distal6.5370823.51945K562ZNF622
    chr127203626072036339-CDS,intron-Distal3.1676914.82681K562ZNF622
    chr127203621472036253-CDS,intron-Distal,intron-Proximal3.197168.39218K562UCHL5
    chr127200861772008669-CDS,intron-Distal4.261079.09836HepG2BCLAF1
    chr127205697272056996-CDS,intron-Distal3.197544.08412K562RBM15
    chr127205724072057310-CDS,intron-Distal3.171256.16485HepG2HLTF
    chr127203024072030304-CDS,intron-Distal,intron-Proximal3.487557.29769HepG2PRPF8
    chr127203219772032236-CDS,intron-Distal,intron-Proximal3.013149.58912K562ZNF622
    chr127203791972038095-CDS,intron-Distal4.4050113.01584K562TRA2A
    chr127203062872030656-CDS,intron-Distal,intron-Proximal3.152337.87286K562ZNF622
    chr127205719672057287-CDS,intron-Distal,intron-Proximal3.784193.46336HepG2SRSF1
    chr127203627872036339-CDS,intron-Distal4.322758.50130HepG2BUD13
    chr127202562972025680-CDS,intron-Distal,intron-Proximal3.117883.33947HepG2U2AF2
    chr127205687572056943-CDS,intron-Distal3.469836.13886HepG2EIF3H
    chr127202596872026012-CDS,intron-Distal,intron-Proximal3.744237.79455K562UCHL5
    chr127200560372005663-CDS,intron-Distal3.494495.14253HepG2GRWD1
    chr127203066472030718-CDS,intron-Distal3.926103.22063K562TRA2A
    chr127203804172038098-CDS,intron-Distal3.068745.00306K562UCHL5
    chr127205683772056907-CDS,intron-Distal3.503448.52673K562RBM15
    chr127202269772022710-CDS,intron-Distal,intron-Proximal5.0194710.64218HepG2BCLAF1
    chr127205093472050965-CDS,intron-Distal4.018358.94445HepG2BCLAF1
    chr127202341572023458-CDS,intron-Distal5.1836714.17165HepG2BCLAF1
    chr127203039572030435-CDS,intron-Distal,intron-Proximal3.333493.07609HepG2ZNF800
    chr127202165772021711-CDS,intron-Distal5.4803316.08161HepG2BCLAF1
    chr127202445472024490-CDS,intron-Distal4.3860610.24470HepG2BCLAF1
    chr127203798872038085-CDS,intron-Distal4.3291717.15397K562ZNF622
    chr127203621572036260-CDS,intron-Distal,intron-Proximal3.8829413.02270K562ZNF622
    chr127201403572014094-CDS,intron-Distal3.119138.60088HepG2BCLAF1
    chr127202847872028506-CDS,intron-Distal,intron-Proximal3.885516.65791HepG2BUD13
    chr127205685572056909-CDS,intron-Distal3.801048.37558HepG2RBM15
    chr127202848372028513-CDS,intron-Distal,intron-Proximal4.9443011.09109HepG2BCLAF1
    chr127202848372028503-CDS,intron-Distal,intron-Proximal3.975663.82000HepG2GRWD1
    chr127202805072028084-CDS,intron-Distal3.351889.89497K562ZNF622
    chr127205093172050971-CDS,intron-Distal3.160224.88483K562ZNF622
    chr127204153272041540-CDS,intron-Distal3.441925.15500HepG2BCLAF1
    chr127200870272008716-CDS,intron-Distal4.415548.80935HepG2BCLAF1
    chr127203883072038855-CDS,intron-Distal3.682886.77066K562UCHL5
    chr127203228072032295-CDS,intron-Distal3.646147.05173K562ZNF622
    chr127205720272057248-CDS,intron-Distal,intron-Proximal3.497344.51666K562RBM15
    chr127205726772057376-CDS,intron-Distal3.5740810.02990K562UCHL5
    chr127201804972018071-CDS,intron-Distal3.543177.42278HepG2BCLAF1
    chr127200898572009007-CDS,intron-Distal,intron-Proximal4.3953611.11870HepG2BCLAF1
    chr127204212972042222-intron-Distal3.654685.29732HepG2KHSRP
    chr127204871872048761-intron-Distal3.714505.54651HepG2SUGP2
    chr127204661672046651-intron-Distal4.551286.10726HepG2SUGP2
    chr127202692972027002-intron-Distal,intron-Proximal3.120293.28806K562KHSRP
    chr127205136772051448-intron-Distal4.5572916.24264HepG2U2AF2
    chr127205415472054217-intron-Distal,intron-Proximal4.007153.77215K562U2AF2
    chr127202349572023565-intron-Distal,intron-Proximal3.588784.10408K562KHSRP
    chr127205631372056424-intron-Distal3.287888.24998K562KHSRP
    chr127201766072017722-intron-Distal4.919316.73684K562KHSRP
    chr127201703072017123-intron-Distal,intron-Proximal4.4523510.06297K562KHSRP
    chr127200699072007044-intron-Distal,intron-Proximal4.428164.85612K562PRPF8
    chr127203606072036114-intron-Distal4.005237.77021K562KHSRP
    chr127204579872045852-intron-Distal3.092544.61989HepG2SUGP2
    chr127204407872044189-intron-Distal3.870885.95946K562KHSRP
    chr127200437072004444-intron-Distal,intron-Proximal3.851567.00860K562TIA1
    chr127205421172054264-intron-Distal,intron-Proximal5.249156.40247K562SF3B4
    chr127200729372007353-intron-Distal,intron-Proximal3.809203.45317HepG2HNRNPL
    chr127204726072047332-intron-Distal3.7538111.74606HepG2SUGP2
    chr127203243272032511-intron-Distal3.977584.14103K562KHSRP
    chr127200697472007078-intron-Distal,intron-Proximal4.610984.72162K562KHSRP
    chr127202878272028870-intron-Distal4.162935.60471HepG2U2AF2
    chr127202684772026886-intron-Distal,intron-Proximal4.651575.47569HepG2U2AF2
    chr127204568372045758-intron-Distal4.714803.96879HepG2MATR3
    chr127202325072023352-intron-Distal,intron-Proximal5.7764210.25778K562PRPF8
    chr127205130172051393-intron-Distal3.441216.49566K562SRSF1
    chr127205654672056698-intron-Distal4.1092117.86132K562KHSRP
    chr127205416372054218-intron-Distal,intron-Proximal3.761136.58004HepG2U2AF2
    chr127204592072045955-intron-Distal3.153053.10883HepG2SUGP2
    chr127201760672017650-intron-Distal3.497595.40624K562KHSRP
    chr127200682772006883-intron-Distal3.934973.45317HepG2HNRNPL
    chr127201050372010548-intron-Distal4.470284.12401HepG2U2AF2
    chr127205642472056484-intron-Distal3.578405.95946K562KHSRP
    chr127204732372047400-intron-Distal4.022016.98272HepG2MATR3
    chr127204932572049378-intron-Distal4.143944.07352K562KHSRP
    chr127203905472039131-intron-Distal4.046053.30440HepG2QKI
    chr127204600872046082-intron-Distal4.041037.03506HepG2SUGP2
    chr127202785272027913-intron-Distal,intron-Proximal4.527314.13847K562AQR
    chr127204905572049091-intron-Distal3.053544.61989HepG2SUGP2
    chr127205430472054385-intron-Distal,intron-Proximal3.333136.24191K562KHSRP
    chr127202903672029147-intron-Distal,intron-Proximal3.896566.89441K562KHSRP
    chr127200758172007620-intron-Distal,intron-Proximal3.596056.16549HepG2U2AF2
    chr127204665172046729-intron-Distal5.2404020.72821HepG2SUGP2
    chr127202879672028863-intron-Distal3.122344.76345K562KHSRP
    chr127202879372028867-intron-Distal3.958523.48768HepG2KHSRP
    chr127204733272047382-intron-Distal4.012976.26907HepG2SUGP2
    chr127203901472039124-intron-Distal3.819856.35227HepG2HNRNPL
    chr127201359872013661-intron-Distal,intron-Proximal4.715915.82778K562PRPF8
    chr127202887872028983-intron-Distal4.4909814.89285K562KHSRP
    chr127205648472056520-intron-Distal4.230954.37030K562KHSRP
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for ZFC3H1 is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for ZFC3H1 is not available on ENCORE database.

    • 96 RBPs can affect the levels of ZFC3H1.  








    The Knockdown/knockout RNA-Seq assay for ZFC3H1 is not available on ENCORE database.





    96 RBPs can affect the gene expression of ZFC3H1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    ZFC3H1ENSG00000133858.111276.46080945.833900.432403.861202.60920HepG2AATF
    ZFC3H1ENSG00000133858.111328.409401022.392900.377702.260701.77510HepG2AKAP1
    ZFC3H1ENSG00000133858.111127.443401447.67770-0.360704.726103.74500HepG2AKAP8L
    ZFC3H1ENSG00000133858.112008.089001701.002100.239302.542301.87970HepG2AUH
    ZFC3H1ENSG00000133858.111093.654501352.59790-0.306602.203601.66420HepG2BOP1
    ZFC3H1ENSG00000133858.111100.603501440.62330-0.388404.978204.13420HepG2CKAP4
    ZFC3H1ENSG00000133858.111614.656401241.757800.378703.106502.38340HepG2CPSF6
    ZFC3H1ENSG00000133858.11774.981201162.48060-0.585008.759606.97880HepG2YBX3
    ZFC3H1ENSG00000133858.111342.055701573.92880-0.229903.008102.23980HepG2DAZAP1
    ZFC3H1ENSG00000133858.111117.404301332.58290-0.254102.672901.85160HepG2DDX19B
    ZFC3H1ENSG00000133858.11728.25990979.41600-0.427502.849802.21500HepG2DDX3X
    ZFC3H1ENSG00000133858.111156.67870841.242200.459303.078002.42960HepG2DDX6
    ZFC3H1ENSG00000133858.111130.267201378.47030-0.286403.046702.33980HepG2DKC1
    ZFC3H1ENSG00000133858.11737.437901141.42640-0.630209.893208.62630HepG2DNAJC21
    ZFC3H1ENSG00000133858.11881.126001131.40890-0.360704.972704.13790HepG2DNAJC2
    ZFC3H1ENSG00000133858.111451.20270808.802200.8433010.518709.40790HepG2EIF2S1
    ZFC3H1ENSG00000133858.111315.12170893.867700.557004.602603.78040HepG2EIF4A3
    ZFC3H1ENSG00000133858.111337.34040978.624300.450404.254101.75690HepG2EXOSC5
    ZFC3H1ENSG00000133858.111113.77050604.396100.8818013.5191011.84080HepG2FUBP3
    ZFC3H1ENSG00000133858.111209.73610901.735100.423803.143702.40660HepG2FXR1
    ZFC3H1ENSG00000133858.111258.16860836.565200.588705.204104.30490HepG2G3BP1
    ZFC3H1ENSG00000133858.111166.43440888.025000.393302.851501.94560HepG2G3BP2
    ZFC3H1ENSG00000133858.11618.22280826.46130-0.418802.214901.41970HepG2GEMIN5
    ZFC3H1ENSG00000133858.11859.025001182.66770-0.461302.452101.49750HepG2GNB2L1
    ZFC3H1ENSG00000133858.11819.207501407.62720-0.781008.561507.47720HepG2GPKOW
    ZFC3H1ENSG00000133858.111712.954901281.810500.418204.007003.18330HepG2HNRNPC
    ZFC3H1ENSG00000133858.111512.47130846.926200.8365011.9511010.59830HepG2HNRNPK
    ZFC3H1ENSG00000133858.111822.685801433.782900.346105.626204.69450HepG2HNRNPL
    ZFC3H1ENSG00000133858.111037.543701273.33440-0.295403.375202.71120HepG2HNRNPU
    ZFC3H1ENSG00000133858.111092.773301300.66540-0.251303.169402.38990HepG2ILF2
    ZFC3H1ENSG00000133858.111377.46750855.284400.687405.620604.14010HepG2KHSRP
    ZFC3H1ENSG00000133858.111120.746201317.14830-0.233002.496201.52620HepG2KIF1C
    ZFC3H1ENSG00000133858.111375.12250902.049300.608205.770804.83430HepG2MAGOH
    ZFC3H1ENSG00000133858.111209.30690815.125300.569009.446708.43410HepG2PCBP1
    ZFC3H1ENSG00000133858.111414.01340829.413600.7695017.4711016.32380HepG2PTBP1
    ZFC3H1ENSG00000133858.111185.948001489.77040-0.329002.483101.91440HepG2PUF60
    ZFC3H1ENSG00000133858.111795.220201581.399000.182901.839901.33500HepG2PUM1
    ZFC3H1ENSG00000133858.111471.64400898.290100.7121012.2445011.06770HepG2QKI
    ZFC3H1ENSG00000133858.111967.088901131.807000.797305.412404.44520HepG2RAVER1
    ZFC3H1ENSG00000133858.111230.039701632.32540-0.408205.397004.73360HepG2RBM22
    ZFC3H1ENSG00000133858.111454.18570815.250400.8348014.1299012.67180HepG2RBM25
    ZFC3H1ENSG00000133858.11991.552101396.72840-0.494302.865501.85700HepG2RBM27
    ZFC3H1ENSG00000133858.111531.81930923.063400.7306015.5049014.41940HepG2NELFE
    ZFC3H1ENSG00000133858.111464.69960859.697700.7686017.1899015.86920HepG2RECQL
    ZFC3H1ENSG00000133858.11681.39630903.09290-0.406402.188601.63480HepG2RPS19
    ZFC3H1ENSG00000133858.111201.563101724.77100-0.521503.584302.67260HepG2RPS3A
    ZFC3H1ENSG00000133858.11970.644101314.92000-0.438002.466501.45290HepG2RPS5
    ZFC3H1ENSG00000133858.111314.134601813.45090-0.464602.014501.43730HepG2SF3A3
    ZFC3H1ENSG00000133858.111477.89060863.539000.7751017.3725016.08410HepG2SF3B4
    ZFC3H1ENSG00000133858.111018.630101322.35530-0.376505.951605.06400HepG2SMN1
    ZFC3H1ENSG00000133858.111983.886501479.441300.423202.248101.54690HepG2SNRNP70
    ZFC3H1ENSG00000133858.113087.677501843.653100.7439027.4466026.29310HepG2SRFBP1
    ZFC3H1ENSG00000133858.111360.97070901.342700.5944010.711509.91340HepG2SRSF1
    ZFC3H1ENSG00000133858.111491.491001158.727900.364104.970004.07820HepG2SRSF7
    ZFC3H1ENSG00000133858.111393.85190733.285900.9265026.0737024.70260HepG2SRSF9
    ZFC3H1ENSG00000133858.111468.73370810.147900.8582018.5405017.27580HepG2TAF15
    ZFC3H1ENSG00000133858.111221.84080744.430500.7147010.852009.22850HepG2TIA1
    ZFC3H1ENSG00000133858.11937.674001248.34770-0.412905.685404.92940HepG2TRIM56
    ZFC3H1ENSG00000133858.11812.23030574.236100.500104.085103.16260HepG2UCHL5
    ZFC3H1ENSG00000133858.111372.134401608.25610-0.229102.537601.86370HepG2UPF1
    ZFC3H1ENSG00000133858.111298.502401552.70440-0.257902.920902.30910HepG2UTP3
    ZFC3H1ENSG00000133858.11966.311101544.86360-0.676905.422403.88270HepG2XPO5
    ZFC3H1ENSG00000133858.111633.757501112.511100.554303.571702.11730HepG2XRCC5
    ZFC3H1ENSG00000133858.111469.921101768.77040-0.267003.917603.29750HepG2ZNF622
    ZFC3H1ENSG00000133858.111627.954201130.307300.526203.592002.09770HepG2ZRANB2
    ZFC3H1ENSG00000133858.114392.446006473.85690-0.5596018.4666017.12070K562AGGF1
    ZFC3H1ENSG00000133858.114434.697206736.31390-0.6031010.018908.67390K562AKAP8L
    ZFC3H1ENSG00000133858.114984.845606152.63290-0.303703.294001.93930K562APOBEC3C
    ZFC3H1ENSG00000133858.114187.296104986.55030-0.252002.033501.51480K562AQR
    ZFC3H1ENSG00000133858.115607.785807067.96250-0.333905.384504.06110K562ATP5C1
    ZFC3H1ENSG00000133858.116083.271307736.70430-0.346904.778503.19570K562CCDC124
    ZFC3H1ENSG00000133858.114783.986005753.51750-0.266204.070802.71220K562CPEB4
    ZFC3H1ENSG00000133858.114674.250303906.412300.258802.562601.80690K562CPSF6
    ZFC3H1ENSG00000133858.112198.013802718.29130-0.306503.151002.03330K562DDX3X
    ZFC3H1ENSG00000133858.113867.946905952.89180-0.6220020.6780019.05060K562DDX47
    ZFC3H1ENSG00000133858.111192.155001779.31470-0.577703.296202.19010K562EIF3A
    ZFC3H1ENSG00000133858.111701.140602743.53950-0.6895010.494508.93410K562EIF3G
    ZFC3H1ENSG00000133858.112367.754802839.89340-0.262302.151301.42310K562EIF4A3
    ZFC3H1ENSG00000133858.112105.113902557.43020-0.280803.168201.91370K562EIF4B
    ZFC3H1ENSG00000133858.115170.385006972.90680-0.4315010.020808.26620K562EIF4G2
    ZFC3H1ENSG00000133858.113767.984402935.129800.360303.397401.60840K562FASTKD2
    ZFC3H1ENSG00000133858.112350.198503858.59590-0.7153012.1246010.23230K562FIP1L1
    ZFC3H1ENSG00000133858.113287.134202425.385000.438503.608902.04860K562FUS
    ZFC3H1ENSG00000133858.112168.258902953.36100-0.445808.362707.38130K562FXR1
    ZFC3H1ENSG00000133858.115214.852303277.062700.670105.224904.18340K562G3BP2
    ZFC3H1ENSG00000133858.113095.341603729.52240-0.268902.372801.63560K562GPKOW
    ZFC3H1ENSG00000133858.112820.034704280.95140-0.602204.516603.55370K562GRSF1
    ZFC3H1ENSG00000133858.112393.121803173.71170-0.407303.341502.31110K562HNRNPM
    ZFC3H1ENSG00000133858.113083.350505231.49100-0.7627013.8328012.10970K562HSPD1
    ZFC3H1ENSG00000133858.112926.040203826.02370-0.386904.181502.64800K562IGF2BP3
    ZFC3H1ENSG00000133858.112985.742503953.97390-0.405205.034703.89350K562MAGOH
    ZFC3H1ENSG00000133858.112909.036203946.13900-0.439905.135203.83090K562MATR3
    ZFC3H1ENSG00000133858.116070.321808008.68320-0.399805.893004.47470K562MBNL1
    ZFC3H1ENSG00000133858.111678.979702150.39060-0.357002.552601.32470K562NONO
    ZFC3H1ENSG00000133858.114922.944704256.792300.209704.798603.85330K562NSUN2
    ZFC3H1ENSG00000133858.112639.830904380.21400-0.7306012.1628010.07460K562PPIG
    ZFC3H1ENSG00000133858.111641.568402124.26930-0.371903.035102.24860K562PRPF8
    ZFC3H1ENSG00000133858.113095.047303841.44160-0.311703.411602.68300K562PTBP1
    ZFC3H1ENSG00000133858.115608.410707607.85290-0.439906.549605.29370K562PUF60
    ZFC3H1ENSG00000133858.116534.341207928.66680-0.279004.696403.43440K562PUM2
    ZFC3H1ENSG00000133858.115549.605906680.77380-0.267602.534902.00980K562PUS1
    ZFC3H1ENSG00000133858.114661.733303127.206600.575903.706302.02440K562RAVER1
    ZFC3H1ENSG00000133858.114753.978806509.24280-0.453404.715103.96130K562RBM15
    ZFC3H1ENSG00000133858.112948.379503684.15380-0.321402.930802.06320K562RBM22
    ZFC3H1ENSG00000133858.113135.659803876.82590-0.306102.441901.42710K562NELFE
    ZFC3H1ENSG00000133858.111342.763002163.96740-0.688507.257805.92100K562RPS19
    ZFC3H1ENSG00000133858.112794.515303444.24620-0.301602.247701.35500K562RPS3
    ZFC3H1ENSG00000133858.111470.304302172.15100-0.563004.152602.51740K562RRP9
    ZFC3H1ENSG00000133858.112544.365803409.80970-0.422403.956502.92800K562SF3B4
    ZFC3H1ENSG00000133858.114824.328904303.605900.164702.564601.65840K562SRPK2
    ZFC3H1ENSG00000133858.113606.887303028.938800.251803.081201.84140K562SRSF7
    ZFC3H1ENSG00000133858.113803.468103050.696000.318103.969902.14520K562SRSF9
    ZFC3H1ENSG00000133858.113184.941503811.48720-0.259101.894801.30150K562TARDBP
    ZFC3H1ENSG00000133858.112983.122803676.53190-0.301503.260302.36130K562TIA1
    ZFC3H1ENSG00000133858.115072.899104513.578500.168402.305801.64600K562UPF1
    ZFC3H1ENSG00000133858.113707.744704913.75860-0.406303.200901.90190K562UTP3
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for ZFC3H1 is not available on ENCORE database.





    21 RBPs can affect the splicing of ZFC3H1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEZFC3H1ENSG00000133858.11chr12-720362157203633972032197720322957203787472038098-0.098000.000020.00036excludedK562AQR
    SEZFC3H1ENSG00000133858.11chr12-720086137200871872008314720084807200898572009096-0.101000.000000.00000excludedK562AQR
    SEZFC3H1ENSG00000133858.11chr12-720086137200871872008314720084807200898572009096-0.337000.000010.00195excludedHepG2SRSF7
    SEZFC3H1ENSG00000133858.11chr12-720130947201318972008985720090967201370572013904-0.069000.002200.05635excludedHepG2SF3A3
    SEZFC3H1ENSG00000133858.11chr12-720086137200871872008314720084807200898572009096-0.062000.001260.02431excludedK562U2AF2
    SEZFC3H1ENSG00000133858.11chr12-7201211172012215720088507200909672013094720131890.081000.000220.01146includedHepG2HNRNPC
    A3SSZFC3H1ENSG00000133858.11chr12-7202666572026889720266657202679772027043720272550.075000.000000.00001longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7202460272024798720246027202473472025557720256670.071000.000000.00000longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7202704372027268720270437202721872027934720281340.051000.000490.00368longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7203869372038892720386937203885572041528720415930.074000.000020.00018longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7200556572005729720055657200566772007114720072150.070000.000000.00004longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7200711472007303720071147200721572008314720084800.119000.000210.00168longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7203026972030466720302697203043472030629720308390.066000.000000.00000longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7202793472028134720279347202808472028483720286050.117000.000000.00000longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7201788372018132720178837201807272020039720202260.232000.000000.00000longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7200416772004381720041677200434572004474720045370.129000.000030.00025longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-7203621572036418720362157203633972037874720380980.062000.000000.00001longerK562AQR
    A3SSZFC3H1ENSG00000133858.11chr12-720089857200918172008985720090967201713972017377-0.607000.017860.08660shorterK562AQR
    RIZFC3H1ENSG00000133858.11chr12-720048377200566772004837720048777200556572005667-0.289000.000000.00025excludedHepG2AKAP1
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.126000.000000.00000includedK562PUS1
    RIZFC3H1ENSG00000133858.11chr12-720048377200566772004837720048777200556572005667-0.081000.000060.00852excludedK562EIF4G2
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.315000.001670.02256includedHepG2PRPF8
    RIZFC3H1ENSG00000133858.11chr12-720048377200566772004837720048777200556572005667-0.240000.000330.07417excludedHepG2XRCC6
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.087000.000000.00011includedK562AGGF1
    RIZFC3H1ENSG00000133858.11chr12-720048377200566772004837720048777200556572005667-0.278000.000220.08992excludedHepG2TRA2A
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.106000.000000.00000includedK562AKAP8L
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.273000.001010.01201includedHepG2TAF15
    RIZFC3H1ENSG00000133858.11chr12-720048377200566772004837720048777200556572005667-0.116000.000020.00360excludedK562KHSRP
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.074000.000030.00055includedK562RBM15
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.055000.006910.06699includedK562UTP18
    RIZFC3H1ENSG00000133858.11chr12-7200483772005667720048377200487772005565720056670.131000.000090.00070includedK562AQR
    RIZFC3H1ENSG00000133858.11chr12-720048377200566772004837720048777200556572005667-0.124000.000000.00014excludedK562PTBP1
    MXEZFC3H1ENSG00000133858.11chr12-72038656720388557204152872041593720378747203809872050664720510810.064000.000220.006351includedK562DROSHA
    MXEZFC3H1ENSG00000133858.11chr12-72008613720087187200898572009181720083147200848072017139720173770.119000.000000.000001includedK562AQR
    MXEZFC3H1ENSG00000133858.11chr12-7203865672038855720415287204159372037874720380987205066472051081-0.051000.005910.071322includedHepG2HNRNPUL1
    MXEZFC3H1ENSG00000133858.11chr12-72008985720090967201309472013189720086137200871872013705720139040.095000.000200.010191includedK562PPIL4

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for ZFC3H1 is not avaliable on ENCORE database.